mRNA_P-wetherbeei_contig113.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig113.5.1
Unique NamemRNA_P-wetherbeei_contig113.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A835ZQC8_9STRA (Ribosomal protein rpS22, plastidal n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQC8_9STRA)

HSP 1 Score: 255 bits (651), Expect = 4.030e-79
Identity = 135/226 (59.73%), Postives = 172/226 (76.11%), Query Frame = 2
Query:  254 AVGAKQ-MTASMKEASKKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAFEKEGVPAGTFVPPNRTAATDISD--LEYVDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPEK 922
            + G++Q + A M+++++KP+LI+GNNIDVTPALMDYVNK+++ V++KLG  VTKVDVHL+VNKNPR+ +GHVAEVT +A  T +IRA E +++MY+SIDLVSDR+ RKLRKYKER + QKR R S+  AA E E AF  +    G           D +D  L +VDMSVVK KSFPMPP TVE+AV  LEYIDHDFYVF+N  +  +NVVYKRNHGGVG I+PE+
Sbjct:   47 STGSRQVLKAVMQDSARKPVLITGNNIDVTPALMDYVNKKMDKVVEKLGGVVTKVDVHLSVNKNPRIADGHVAEVTCYAKGT-IIRATEHTDSMYSSIDLVSDRMGRKLRKYKERSLTQKRSRTSISEAAGEVEEAFTPDSADGGE---------PDYADDGLPHVDMSVVKSKSFPMPPCTVEDAVTALEYIDHDFYVFRNSATSEVNVVYKRNHGGVGHIQPER 262          
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A835ZBG9_9STRA (Ribosomal protein S30Ae/sigma 54 modulation protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG9_9STRA)

HSP 1 Score: 244 bits (622), Expect = 9.000e-75
Identity = 128/224 (57.14%), Postives = 167/224 (74.55%), Query Frame = 2
Query:  272 MTASMKEASKKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAF-------EKEGVPAGTFVPPNRTAATDISDLEYVDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPEK 922
            + A M+++++KP+LI+GNNID+TPAL +YVNK+++ V++KLG  VTKVDVHL+VN+NPRV + H+AEVT+FA K   +RAAE +++MYASIDLV+D ++RKLRKYKER + QKRHRA L   A E+E  +       E+EG   G  VP              VDMSVVK+K FPMPP TVE+AV+ + YIDHDFYVF+N  +G INVVYKRNHGGVG I+PE+
Sbjct:   53 LKAVMQDSTRKPVLITGNNIDLTPALNEYVNKKMDKVVEKLGGVVTKVDVHLSVNRNPRVADSHIAEVTVFA-KGATLRAAEKTDSMYASIDLVTDSMARKLRKYKERSLTQKRHRAPLSEIAGESEAKWTSDDGDEEEEGFEGGDGVP-------------RVDMSVVKKKEFPMPPCTVEDAVVAMAYIDHDFYVFRNSATGEINVVYKRNHGGVGHIQPER 262          
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A6V1KPF4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KPF4_HETAK)

HSP 1 Score: 216 bits (549), Expect = 4.170e-64
Identity = 116/227 (51.10%), Postives = 160/227 (70.48%), Query Frame = 2
Query:  245 TRVAVGAKQMTASMKEASKKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAFEKEGVPAGTFVPPNRTAATDISDLEY-VDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPEK 922
            TR  + + +M+AS  +  KKPIL++GNNID+TP++ +YV K++ NVL K+G DVTKVD HL V++NPR+ N H AE+T++ +K  V+RA E SE+MY +IDLVSD +  KLRKYKE+++D+KR           AE   +   +P    V  + T     +DL+  V+M VVK KSFPMPP +VE+AV+ LEYIDHDFYVF+N+ +  +NVVYKRN GGVG I+PE+
Sbjct:   32 TRAPMASLRMSASFSD--KKPILVTGNNIDMTPSIKEYVEKKMNNVLSKVGGDVTKVDCHLTVDQNPRIENSHKAEITVY-TKGAVVRATEQSEHMYGTIDLVSDTIFMKLRKYKEKRIDRKR---------GTAEARMDPVVLP--EEVEDSDTEEDVYNDLDASVNMDVVKEKSFPMPPMSVEDAVVSLEYIDHDFYVFRNEKTSEVNVVYKRNSGGVGHIQPER 244          
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A7S2CSI1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CSI1_9STRA)

HSP 1 Score: 206 bits (525), Expect = 1.720e-60
Identity = 118/221 (53.39%), Postives = 154/221 (69.68%), Query Frame = 2
Query:  272 MTASMKEASKKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAA-----EAEVAFEKEGVPAGTFVPPNRTAATDISDLEYVDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPE 919
            +TA      ++PI+++GNN++VTPA+++YVNK+L+ VLDK    VTK DVHL V  NPRV   H AEVT+ A K  V+R +E SENMYA+ID V+D ++RKLRK+KERK D+K+  +++  A A     + EV   +E   AG    P            +VDMS+VK+KSF M P TVE+AVLCLEYIDHDFYVF+NK++G +NVVYKRN GGVG IEPE
Sbjct:   41 ITAMSSIPDRQPIIVTGNNVEVTPAMLEYVNKKLDKVLDKHRQVVTKCDVHLTVVHNPRVKESHRAEVTL-AVKGLVMRTSEDSENMYATIDAVADSLARKLRKFKERK-DKKQSSSAIRDADALNLSEDEEVESPEEDAFAGAVEIPR-----------FVDMSIVKQKSFNMEPITVEDAVLCLEYIDHDFYVFRNKETGEVNVVYKRNSGGVGHIEPE 248          
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A6H5KRW8_9PHAE (Ribosom_S30AE_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRW8_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 7.790e-58
Identity = 111/211 (52.61%), Postives = 148/211 (70.14%), Query Frame = 2
Query:  299 KKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAFEKEGVPAGTFVPPNRTAATDISDLEYVD----MSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPE 919
            + PI+++GNN++VT  L +YV K++  VLDK+G+ V+KVDVHL+VNKNP V++ H  EVT+F SK  VIRA + S+NMYAS+D V+DR+ RKLR++KERKV   R R+ L A +   E   EK+   A         A  D  + +Y D    M+V+K KSFPMP  +VEEAV CLEYI HDFY+F+N+++  +NVVYKR  GGVGLIEPE
Sbjct:   65 RAPIIVTGNNVEVTEPLKEYVEKKMAKVLDKVGSSVSKVDVHLSVNKNPSVSDNHNTEVTVF-SKNHVIRATDNSDNMYASVDQVTDRIQRKLRRFKERKVAGMRGRSGLRALS---EKTAEKDMDAAAV-----EAADEDPFEDKYGDKPEAMTVMKTKSFPMPAISVEEAVTCLEYIGHDFYLFRNEETNEVNVVYKRKSGGVGLIEPE 266          
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A6T8LT77_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8LT77_HEMAN)

HSP 1 Score: 194 bits (494), Expect = 7.150e-56
Identity = 111/215 (51.63%), Postives = 144/215 (66.98%), Query Frame = 2
Query:  278 ASMKEASKKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAFEKEGVPAGTFVPPNRTAATDISDLEYVDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGH-INVVYKRNHGGVGLIEPE 919
            A ++ A+  PILISGNNI+VTPA+ DYVNK+    LDK+G  VTK DVHL  ++NP ++  +  EVT+FA K   IRA + +++MYA+ID VSD + RKLRKYKER +D  R   +      E E++  +E     T V       +DI D+   DMS ++ K+F M P ++EEAVLCLEYIDHDFYVFKNKD G+ +  VY RN GGVGLIEPE
Sbjct:   40 APLRMAANVPILISGNNIEVTPAIKDYVNKKFGKALDKVGKQVTKCDVHLIYDQNPAISTPNHVEVTLFA-KGATIRAHKNNDDMYATIDEVSDTIKRKLRKYKERIIDTHRQGKAEAQGVTEEEISMFEEF---NTEVM-EEMKKSDIVDVPAPDMSSIQTKTFSMEPISLEEAVLCLEYIDHDFYVFKNKDKGNKVQCVYNRNAGGVGLIEPE 249          
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A7S0F1P1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F1P1_9CRYP)

HSP 1 Score: 195 bits (495), Expect = 1.360e-55
Identity = 111/214 (51.87%), Postives = 145/214 (67.76%), Query Frame = 2
Query:  284 MKEASKKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAFEKEGVPAGTFVPPNRTAATDISDLEY--VDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPE 919
            M  A K PI ISGNN+++TPAL  Y+N++L N L K+G  VT+ D HL V+KNP V N    EV +    T V+RA++ + +MYASID V+D V RKLRKYKER +D   HR     A     + F++E +   +F    +  A   SD+     DMS++K+K+FPM P +VEEAVLCL+YI+HDFYVFKNK++G I VVYKRNHGGVGLIEP+
Sbjct:   79 MSSAVKIPITISGNNVELTPALKQYINEKLTNTLSKVGRLVTRCDAHLTVDKNPSVENNANFEVVVSVKGT-VMRASKSTHDMYASIDAVADSVKRKLRKYKERIIDA--HRQGKPEA-----IGFDEEEIQ--SFKDFAQEVAKMDSDIPVPPADMSLMKKKTFPMDPISVEEAVLCLDYIEHDFYVFKNKENGKIAVVYKRNHGGVGLIEPQ 282          
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: L1J9F8_GUITC (Ribosom_S30AE_C domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J9F8_GUITC)

HSP 1 Score: 192 bits (487), Expect = 1.940e-55
Identity = 106/212 (50.00%), Postives = 140/212 (66.04%), Query Frame = 2
Query:  284 MKEASKKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAFEKEGVPAGTFVPPNRTAATDISDLEYVDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPE 919
            M  A K PI ISGNN+++TPAL  Y+N++L N L K+G  VT+ D HL V+KNP V N    EV +    T V+RA++ + +MYASID V+D V RKLRKYKER +D   HR     A     + F++E +              +   +   DMS++K+K+FPM P +VE+AVLCL+YI+HDFYVFKNK++G I VVYKRNHGGVGLIEP+
Sbjct:    1 MSSAVKIPITISGNNVELTPALKQYINEKLTNTLSKVGRLVTRCDAHLTVDKNPSVENNANFEVVVSVKGT-VMRASKSTHDMYASIDAVADSVKRKLRKYKERIIDA--HRQGKPEA-----MGFDEEEIQGFKDFTQEVAKMENSLPVPPADMSLMKKKTFPMEPISVEDAVLCLDYIEHDFYVFKNKENGKIAVVYKRNHGGVGLIEPQ 204          
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A7S2SIX8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SIX8_9STRA)

HSP 1 Score: 186 bits (471), Expect = 7.110e-52
Identity = 99/210 (47.14%), Postives = 135/210 (64.29%), Query Frame = 2
Query:  299 KKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAFEKEGVPAGTFVPPNRTAATDISDLEY---VDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPE 919
            + P++++GNN+++TP L DY ++++E V+ K    + K D+HL V +NP V N H+AE T+ + K   IR++  SENMYASID+++D ++RKLRKYKER+ +Q        A     +   E+       F      AAT      Y   +DM +VK K F M P T EEAVLCLEYIDH FYVF+N ++G INVVYKRNHGGVGLIEP+
Sbjct:   93 RTPMIVTGNNVEMTPTLKDYAHEKIEKVVGKHREYILKTDIHLTVTRNPSVKNAHIAEATV-SVKGNTIRSSHHSENMYASIDMMADGLARKLRKYKERRTNQMHASHGHSALREVEDPELEEMNEVEDDFADYQEEAAT------YGPAIDMDIVKNKKFKMDPITAEEAVLCLEYIDHPFYVFRNSETGDINVVYKRNHGGVGLIEPD 295          
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A8J6C5Z9_DIALT (Ribosom_S30AE_C domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C5Z9_DIALT)

HSP 1 Score: 181 bits (459), Expect = 6.680e-51
Identity = 106/239 (44.35%), Postives = 143/239 (59.83%), Query Frame = 2
Query:  224 SFGVSAGTRVAVGAKQMTASMKEASKKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAFEKEGVPAGTFVPPNRTAATDISDLEYVDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPEKV*GAGA 940
            S G     R AV A+    +     + PI ISGNN+++T A+  YV++++   L K    V++ D HL+V +N RV  GH  EV  F SK  VIRAAE SE+MY+SIDLV+ +++RKLRK KER+ D                   + + VP       +  AA D   L+    SVV+ K F MPPQT+E+A++CLEY+DH FYVF+N  SG INV+YKRN GG+GLIEP+K+ G  A
Sbjct:   15 SAGAWRAPRPAVRARASRMAAVRMYETPITISGNNVELTEAMKAYVDEKVGAALSKFVPMVSRCDAHLSVIRNARVAQGHTCEVVCF-SKGAVIRAAERSESMYSSIDLVAAKLARKLRKLKERRQD-------------------KGDRVPTNELFEADEPAAVDEPVLDAA--SVVRTKRFQMPPQTLEDAIVCLEYVDHPFYVFRNSASGEINVIYKRNEGGIGLIEPDKLSGEAA 231          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZQC8_9STRA4.030e-7959.73Ribosomal protein rpS22, plastidal n=1 Tax=Tribone... [more]
A0A835ZBG9_9STRA9.000e-7557.14Ribosomal protein S30Ae/sigma 54 modulation protei... [more]
A0A6V1KPF4_HETAK4.170e-6451.10Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2CSI1_9STRA1.720e-6053.39Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6H5KRW8_9PHAE7.790e-5852.61Ribosom_S30AE_C domain-containing protein n=2 Tax=... [more]
A0A6T8LT77_HEMAN7.150e-5651.63Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0F1P1_9CRYP1.360e-5551.87Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
L1J9F8_GUITC1.940e-5550.00Ribosom_S30AE_C domain-containing protein n=1 Tax=... [more]
A0A7S2SIX8_9STRA7.110e-5247.14Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J6C5Z9_DIALT6.680e-5144.35Ribosom_S30AE_C domain-containing protein n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig113contigP-wetherbeei_contig113:5977..9435 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LG85
Preferred namePSRP-1
PFAMsRibosom_S30AE_C,Ribosomal_S30AE
Model size1338
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorymitochondrion
Exons9
Evalue6.77e-62
EggNOG OGsCOG1544@1|root,2QQ0F@2759|Eukaryota
Ec32 ortholog descriptionribosomal protein rpS22, plastidal
Ec32 orthologEc-17_004130.1
DescriptionSigma 54 modulation/S30EA ribosomal protein C terminus
Cds size726
COG categoryJ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig113.5.1prot_P-wetherbeei_contig113.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig113 6179..9025 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185905.9822195-UTR-P-wetherbeei_contig113:5976..61781683185905.9822195-UTR-P-wetherbeei_contig113:5976..6178Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig113 5977..6178 +
1683185906.0573828-UTR-P-wetherbeei_contig113:9025..94351683185906.0573828-UTR-P-wetherbeei_contig113:9025..9435Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig113 9026..9435 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185905.990972-CDS-P-wetherbeei_contig113:6178..62001683185905.990972-CDS-P-wetherbeei_contig113:6178..6200Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig113 6179..6200 +
1683185905.9979434-CDS-P-wetherbeei_contig113:6343..64081683185905.9979434-CDS-P-wetherbeei_contig113:6343..6408Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig113 6344..6408 +
1683185906.0050206-CDS-P-wetherbeei_contig113:6589..67121683185906.0050206-CDS-P-wetherbeei_contig113:6589..6712Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig113 6590..6712 +
1683185906.0121713-CDS-P-wetherbeei_contig113:7041..71791683185906.0121713-CDS-P-wetherbeei_contig113:7041..7179Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig113 7042..7179 +
1683185906.0192518-CDS-P-wetherbeei_contig113:7498..75601683185906.0192518-CDS-P-wetherbeei_contig113:7498..7560Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig113 7499..7560 +
1683185906.0262425-CDS-P-wetherbeei_contig113:7858..79801683185906.0262425-CDS-P-wetherbeei_contig113:7858..7980Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig113 7859..7980 +
1683185906.0333002-CDS-P-wetherbeei_contig113:8242..83271683185906.0333002-CDS-P-wetherbeei_contig113:8242..8327Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig113 8243..8327 +
1683185906.0403764-CDS-P-wetherbeei_contig113:8517..85501683185906.0403764-CDS-P-wetherbeei_contig113:8517..8550Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig113 8518..8550 +
1683185906.0473304-CDS-P-wetherbeei_contig113:8949..90251683185906.0473304-CDS-P-wetherbeei_contig113:8949..9025Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig113 8950..9025 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig113.5.1

>prot_P-wetherbeei_contig113.5.1 ID=prot_P-wetherbeei_contig113.5.1|Name=mRNA_P-wetherbeei_contig113.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=242bp
MWRHRGLSFGVSAGTRVAVGAKQMTASMKEASKKPILISGNNIDVTPALM
DYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPV
IRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAE
VAFEKEGVPAGTFVPPNRTAATDISDLEYVDMSVVKRKSFPMPPQTVEEA
VLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPEKV*
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mRNA from alignment at P-wetherbeei_contig113:5977..9435+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig113.5.1 ID=mRNA_P-wetherbeei_contig113.5.1|Name=mRNA_P-wetherbeei_contig113.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3459bp|location=Sequence derived from alignment at P-wetherbeei_contig113:5977..9435+ (Phaeothamnion wetherbeei SAG_119_79)
CTCTGCAAGCAGAAAGAAAAGCATTCATTACTTTCATCATGGCGGTACGA CTCACTGCTCTGCTCCTCTCGGCGGGGATTGCGCAAGGTGAGGTGTTTAT GGAGGGTTGCAGTTCGGTCTGAAAGGCAGCAATCCCACAGATGCTCCCTT CTTCAATTCTGCGCCAGGCGTGCCTTCTTCTCCTCTTGCACTGTACCTTG CAATGTGGCGCCATCGTGGCCTTTGCCTCGTAAAATCAACAACTCATGAT CTGACAAAAGATCTCGCTTTCACCCGCTATTCCTGCGCCTTCCAGGCTTC GTGGGATGCCCTGCTGCACGGTTGCGGCCGTACTGCGACGGTAGAAGTAT CGTCGCCGCAACGGGAGCTTTTGGCGTATCTGCGGGTACCCGGGTAGCCG TGGGAGCAAAACAAATGACAGCTTCCATGAAGGTGTGTGAGGCTTGCGAC GACCCATTCGAGTGCTCATCTACCATGGCGCAGTGGTACGATCGTTCCTG CCGTCGGCAGGCAATCGCAACGAGCTTCATTCGCAAGTCTGTATCTCCAC GCTCGAGCTCTCTCTTTCTTTTCGTCGTTCGGCTTTCAATCACTAAACCG CGTTTGCCTGCAGGAAGCGTCCAAAAAGCCAATCTTGATCAGCGGCAACA ACATTGACGTGACCCCGGCACTGATGGACTACGTCAACAAGCGGCTCGAG AACGTCCTCGACAAGCTCGGCGCCGACGTCACCAAGGTGCAGAGTGACGG TCGCTGGAAGGTCCTGCAATAGAACATCTTTTATTCGCTTTATGATCATT TCTTGTCCGCGGCGCGTGGCTGACGGCGGGCCTTTCGCAGTCTTTCCAAC CCTTTTTTCGCCATGCTTCTTTTTGTTATGGATATACTCCCAGTTTTTCG CTTGCCGATTAAACCGCTAGGAATATTTATCTGCACGAGGTTGTTTCTCC AACCAAAGACCGATTCCTTTTTTCTCGCCTCTGCAAACAATGACCGAACC GTCATTCAAACCGCAATGAACGTCGCTGCCGACGATCCCAACGGCACTGA ATCCACCGAGAGCAGGTGGACGTGCACCTGGCGGTAAACAAGAACCCACG GGTGACGAATGGGCACGTTGCGGAAGTGACTATCTTCGCCAGCAAGACGC CAGTCATCCGCGCCGCCGAGGGCTCCGAGAACATGTACGCCTCCATCGAC CTGGTGAGTAGAGTCAAAACAGCAGTCTTGACCGCTCCGGTCCTGTTTCG TTGTTTTACGGCTTGTTAGACGGGTGCTTCTTCTCTTTCTGCCACTAGAT GCGGCGACGCGGGGTGCTGTAGAAAGGAGATGCTTTGCTTTTTGCTCGTA TCCTAACAGTTTATGGCTGGCAACGGCCTTAACGTGCGAGCCATGTTCTG CAGGCCCACCTTTGCATCCTGGCATCGGTTTCGTTTTTCTGCCACCTTTC CCTACCACGATCTGTCAGCCTTTCCCTACTGACCAAACCTGTGCTTCCAT TTTTCGGGGTTTTGGGGCCCAGGTGAGCGACCGTGTGTCGCGGAAGCTGC GCAAGTATAAGGAGCGCAAGGTCGACCAGAAGCGGTAAGGGACTCTCATT CCTCCCTTCCCTATCCTGCTGCTGGATTACAGGCCAAAACTTGCTTGCAA TGCGCATCTGGCCCTTTGAATGCACTTTGACGCGATCGCCAGCCGCGGGC GTCGTTTCGGTTAGGGGAACCTCTGTGGGCATTTCTCGCCCTTCTCTCCT TGCCGCTTCGCCGGCCTGCTTGTGTACCCATCCACACACCCACAACGCCT CGCTCTCCGCGGTTCGTCTCGGCAACGGGAATTACTGCCGGCCCGCCCGG CGAACAAAACGCCGGAACGTCAAACGGAACAGTCACCGTGCGTCGTTGGG TGCCGCAGCAGCGGAGGCGGAGGTGGCATTCGAGAAGGAGGGAGTCCCCG CGGGCACCTTCGTGCCGCCCAACCGCACCGCCGCGACTGATATTTCCGAC CTCGGTACGCTTTGTTCTTATTTTCCGATGGCTGGAGGAGGCGGGGATTA TCGTGCTCAATGCCGGATTGGCTTCTTGCGTGTCCGTTTGTAGCTGCGCA TGTTGTGCACTGATAAGGGAGGACGGATTATCGCTTGACTTCAGGTTTAA TCTTCCCTCTGCTTTCTTTTTTCCTTATTTTCTGGGTCCAGAGCTGATAC AATAGCCGACATAGTTTCATACTTGTATGCGCCCCTTGTCCTCCTCAACT TGTTTCTTCCCCGCAGAGTATGTTGACATGTCGGTAGTGAAGCGGAAATC GTTTCCGATGCCGCCGCAGACGGTGGAGGAGGCTGTGCTCTGCCTCGAGT AGTAAGTCAAGGTCACCGCTTTGGACGTTGAGCTGTTTTCATGGTCGCGC TCCGGCTCTATTTGCAGCGGTGGATTGATTTGAATTTATTCCCATGTTCT CACTTCCTCGCTAAGATTTTCCAAAATTTCCACGTGCCCCGCCGTCTTGA ACTTCGGCCCCGCTCTTGCCAACCTGGACAATTACGCGCAGCATCGACCA CGATTTTTATGTTTTCAAGAACAAGTAAGAGAGCGTGGCTTTAGCTTCAC AGTCGGTCCTTTAGCTTAACAGTCGGTCTAGACGGAGTCTTGCTGTCAAT ACGTAGCGGCAGACCACTGGTGCGGTTGCGCTTGCTGAGGCGATGGCTGT GGGCATGCATCATTGGATCTGGCGTTGGTCCGTATCCGTTTCCCGAAGTG ATCTTGCCCGTTCTGTGCCTGAAGATGTTCGCTGGCATCGAGGCGTATGT ATGTGCCCTTGTATGAAACGGCCATGCTGCTGGACCAAAAAGAATTGCCT CTACTTGTGCTCATGCAGACTTGCTGCCGTTCTAGCTCTATTGTGTCCAG TACCAATGCGACCCTGCTATTTGAATGATCCCTACCGTATGCGTCTTTCC CGCTTCGTCTCTTCTGTTCACAGGGACTCGGGCCACATCAACGTCGTGTA CAAGCGGAACCACGGCGGCGTGGGTCTCATTGAGCCGGAGAAGGTCTGAG GCGCAGGCGCCGCGGGCTCTGCGGTCTAACGACGGTTTTGGCCGCGACTG CTAGCCCGCGACTGCCGCAGAGGTCTGTTAGTCAGATTATGGGGGAATCG GGACCACTGGAGTCGCGCATGGCGAGGGTACCGTTCGGGGGTTTGGCTGC AGATGACGCAAACGCCAAGAAAGTGTCAAGGAAGGGTAGGCGAAGACTGG GGCCGGGTGCCGATAGGGCACACACAAAATAGATCAGACTCAGTTTGGTA CCGGGGCGTGCCATTCTGGCCTGAAAGAAGAGTGCAACGGCTTGCTATAT GCCGTGGCCACGGCTAAAACGGGAGCCAGCACTTACTTACACAAAAACAT CAAAACCACTTGCGGAGAGGGAAAAAAAGCCTTTCTGCCTTCTTTGGTTT CAAATCCTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig113:5977..9435+

>mRNA_P-wetherbeei_contig113.5.1 ID=mRNA_P-wetherbeei_contig113.5.1|Name=mRNA_P-wetherbeei_contig113.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=726bp|location=Sequence derived from alignment at P-wetherbeei_contig113:5977..9435+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGCGCCATCGTGGCCTTTCTTTTGGCGTATCTGCGGGTACCCGGGT
AGCCGTGGGAGCAAAACAAATGACAGCTTCCATGAAGGAAGCGTCCAAAA
AGCCAATCTTGATCAGCGGCAACAACATTGACGTGACCCCGGCACTGATG
GACTACGTCAACAAGCGGCTCGAGAACGTCCTCGACAAGCTCGGCGCCGA
CGTCACCAAGGTGGACGTGCACCTGGCGGTAAACAAGAACCCACGGGTGA
CGAATGGGCACGTTGCGGAAGTGACTATCTTCGCCAGCAAGACGCCAGTC
ATCCGCGCCGCCGAGGGCTCCGAGAACATGTACGCCTCCATCGACCTGGT
GAGCGACCGTGTGTCGCGGAAGCTGCGCAAGTATAAGGAGCGCAAGGTCG
ACCAGAAGCGTCACCGTGCGTCGTTGGGTGCCGCAGCAGCGGAGGCGGAG
GTGGCATTCGAGAAGGAGGGAGTCCCCGCGGGCACCTTCGTGCCGCCCAA
CCGCACCGCCGCGACTGATATTTCCGACCTCGAGTATGTTGACATGTCGG
TAGTGAAGCGGAAATCGTTTCCGATGCCGCCGCAGACGGTGGAGGAGGCT
GTGCTCTGCCTCGAGTACATCGACCACGATTTTTATGTTTTCAAGAACAA
GGACTCGGGCCACATCAACGTCGTGTACAAGCGGAACCACGGCGGCGTGG
GTCTCATTGAGCCGGAGAAGGTCTGA
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