mRNA_P-wetherbeei_contig11258.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A7X9AFB7_9BURK (Histidine kinase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AFB7_9BURK) HSP 1 Score: 272 bits (695), Expect = 1.090e-83 Identity = 140/292 (47.95%), Postives = 209/292 (71.58%), Query Frame = 1
Query: 64 LRSVISTPLMDQHRSFGVLHVWADRPYAYVDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQRRV-DDPALKDLTRAIQDSVTHMSSLTRDLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLEVMADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGSGEMILEVQDNGIGIAPDEQAAVFQLFQQATNN-RRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPL 933
+RS++S PL+ + GVL+ W RP+AY+DSDLEL+EL++G++S I + ++++EQ LV+EL++ NRI+DEFLAV THDLRN++QG+LA +L R +DP L +L + + + M +L DLHDLA+LGM AIRL+ ++ + V + +E+AR+ +V L E + L + ADP+R+RQ++SNLVSNAIKYNR GG V++ R E +LEV+DNG+GI P+ Q A+F LF++ T++ R+ +GSGLGL I++QL +LHGG +E+ SE+ +GS FR+ LPL
Sbjct: 262 MRSLVSAPLLFRDECLGVLNFWCHRPHAYLDSDLELVELIAGHISAAIQSARRVEREQRLVEELREVNRIQDEFLAVATHDLRNALQGVLAYIGILAVRAGEDPVLAELVADLASASSGMKTLITDLHDLARLGMRAIRLHPTRLDLKNLALSVLDQHAEFAREEKVHLARPEQEPSLFLEADPIRLRQVLSNLVSNAIKYNRPGGRVEVSWRQEEQ-EAVLEVRDNGVGIKPEHQEAIFDLFRRVTSSSRKAEGSGLGLTITRQLVDLHGGCIELNSEVDRGSLFRIRLPL 552
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A7C5ECA6_9CHLR (Response regulator n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5ECA6_9CHLR) HSP 1 Score: 173 bits (439), Expect = 5.850e-45 Identity = 105/301 (34.88%), Postives = 172/301 (57.14%), Query Frame = 1
Query: 61 ELRSVISTPLMDQHRSFGVLHVWADRPYAYVDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQRRVDDPALK----DLTRAIQDSVTHMSSLTRDLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLEVMADPVRIRQIISNLVSNAIKYNRRGGWV---KIRGRGAGSGEMILEVQDNGIGIAPDEQAAVFQLFQQATNN--RRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPLP 936
E R+ + PL R GVL + A++ A++ ++ +L+ ++ ++ I + + Q ++E+++ +R+K EFLA+++H+LR + I+ ++++ + +D P + DL AI +S H+ L D+ DLAK+ + L + +A T++ V S + V L D V ADP+R+RQ++ NL+SNA K+ G ++ +G E+ + V D G GIAP++QA +F+ F Q + R+ GSGLGLAIS+QL ELHGGR+ VESE+GKGS F LPLP
Sbjct: 385 ETRAEAALPLRVGERIIGVLDLQANQVNAFLPEEIAVLQTLADQVAVAIDNARSYELAQQAIREMRELDRLKSEFLAMMSHELRTPLNSIIGFSRVILKGIDGPLTELQEQDLN-AIYNSGQHLLRLINDVLDLAKIEAGKMELAYDEVNIAETIQGVLPTISGVLKDKPVQLITNVADDIPIVRADPIRLRQVLINLLSNAAKFTEEGSITVEAHVQPSPSGGREVYISVTDTGPGIAPEDQAKLFKSFSQVDTSPTRKTGGSGLGLAISRQLVELHGGRIGVESEVGKGSKFYFTLPLP 684
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A1Q7HL34_9CHLR (Histidine kinase domain-containing protein n=1 Tax=Chloroflexi bacterium 13_1_40CM_4_68_4 TaxID=1805077 RepID=A0A1Q7HL34_9CHLR) HSP 1 Score: 163 bits (412), Expect = 2.280e-43 Identity = 100/296 (33.78%), Postives = 167/296 (56.42%), Query Frame = 1
Query: 58 VELRSVISTPLMDQHRSFGVLHVWADRPYAYVDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQRRVDDPALKDLTRAIQDSVTH---MSSLTRDLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLE-VMADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGSGEMILEVQDNGIGIAPDEQAAVFQLFQQATNNRRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPL 933
+ +R+V+ PLM + GV+ + R + + ++L+E + + I + + Q +EL+ A+R K EFLA ++H+LR + I +++LQ ++ P + D + + SL D+ DL+K+ + L S+ + + E A + ++LG +EL GLE + AD +++QI+ NL+SNA+K+ GG V + G G + + V D GIGIAPDE+ +F+ FQQA + R +G+GLGL ++++ ELHGG++ VESE+GKGSTFR LP+
Sbjct: 123 MHVRTVLGVPLMREGEVAGVILLRRTRVAPFDEKQIQLVETFANQAAIAIENARLFNQIQEKSRELELASRHKSEFLANMSHELRTPLNAINGFSEVLQEQMAGPLNDRQVEYVSDILESGKLLLSLINDILDLSKVEAGRMELEPSEFSLFDVLTNALTLVRERAARQHISLG-LELQPGLERITADERKVKQIVVNLLSNAVKFTPDGGRVDVVGARR-DGALEVSVHDTGIGIAPDERERIFEEFQQAASARGREGTGLGLTLAKRFVELHGGKIWVESEVGKGSTFRFTLPI 416
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A7C2J142_9BACT (GAF domain-containing protein n=1 Tax=candidate division NC10 bacterium TaxID=2072417 RepID=A0A7C2J142_9BACT) HSP 1 Score: 167 bits (422), Expect = 7.240e-43 Identity = 110/331 (33.23%), Postives = 181/331 (54.68%), Query Frame = 1
Query: 34 ENQPLGDDVELRSVISTPLMDQHRSFGVLHVWA-DRPYAYVDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQRRVDDPA---LKDLTRAIQDSVTHMSSLTRDLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGP-IELDTGLEVMADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGS-----------------------GEMI-LEVQDNGIGIAPDEQAAVFQLFQQATNN--RRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPL 933
E + L + +RS++ TP++D+ R FGV+ V DRP + +++ L ++++ S ++ + Q+ Q +L++A++ K EFLA + H+LR + GI+ ++L+ + P+ + RAIQ S H+ +L D+ DL+K+ + L+ A V A +S++TL +E+ G+ + AD R +QI+ NL+ NAIK+ GG V + R S GE + + V D GIGI P++Q +F+ FQQ +++ R G+GLGLA++++ E+HGGRL VESE+GKGSTF VLPL
Sbjct: 461 EARDLLRSIGMRSLLVTPMLDRDRVFGVIKVAQFDRPRRFSANEIHLCQMLANQASIAMVNARLYQELQEKSAQLERASQHKSEFLASMAHELRTPLHGIMGFSELILEQPAGPSGDRQRRYARAIQVSGKHLLTLVNDILDLSKIEAGKMELHRENFLAADAVNEAWAIMQPLAAKSQITLTTDVEMSVGI-IFADLGRFKQILFNLLGNAIKFTSTGGRVTLTARRVDSPRGQTGDAPQPLDDLATRSVDRSGEWLEVRVTDTGIGIRPEDQERIFEQFQQVSSSVTREQSGTGLGLALARRFVEMHGGRLWVESEVGKGSTFIFVLPL 790
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A1V5PDD8_9BACT (Sensor histidine kinase TmoS n=1 Tax=bacterium ADurb.Bin363 TaxID=1866927 RepID=A0A1V5PDD8_9BACT) HSP 1 Score: 164 bits (415), Expect = 3.520e-42 Identity = 105/298 (35.23%), Postives = 171/298 (57.38%), Query Frame = 1
Query: 70 SVISTPLMDQHRSFGVLHVWADRPYAYVDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQR-RVDD--PALKDLTRAIQDSVTHMSSLTRDLHDLAKLGMEAIRLNLSKC-------PVAATVRLVTQEFSEYARQSEVTLGPIELDTGLEVMADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGSGEMILEVQDNGIGIAPDEQAAVFQLFQQATNN-RRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLP 930
S+ P++ Q + FG++ + +++ + + L+ V+ ++ R+ Q+E+ +V +L++AN++KDE++ ++H+LR + I+ + LL+ R+ P +L + S +M L DL DL+KL + I LN + V TVR++ E S VT+ D V DP R+RQII NLV+NA+KYNR GG VKI + ++++V D GIGI ++QA+VF+ F+Q R+ G+GLGL+I++QL ELHGG + +ESEL +GSTF + LP
Sbjct: 240 SLCYVPMLYQDKCFGIIGLASNKKNYFTHDHVRLVTAVAKQVAIAFSRTLLYQREKEMVIKLKEANKLKDEYIGNISHELRTPLTAIIGFSYLLKGGRIGSVSPIQMELIEDVLTSAQNMLHLVEDLLDLSKLQAKKINLNKRETNLQVIIDEVITTVRIMADEIS-------VTIEKYFDDHFPNVYVDPDRMRQIILNLVTNAVKYNREGGSVKIFLQDEKE-FLVIKVLDTGIGIKQEDQASVFEQFRQLGGGIRKFRGTGLGLSITKQLVELHGGEILLESELARGSTFTIRLP 529
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A838RLJ1_9CHLR (GAF domain-containing protein n=1 Tax=Ardenticatenales bacterium TaxID=2614248 RepID=A0A838RLJ1_9CHLR) HSP 1 Score: 161 bits (407), Expect = 9.810e-42 Identity = 99/296 (33.45%), Postives = 169/296 (57.09%), Query Frame = 1
Query: 67 RSVISTPLMDQHRSFGVLHVWADRPYAYVDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQRRVD----DPALKDLTRAIQDSVTHMSSLTRDLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLEVM-ADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGSGEMILEVQDNGIGIAPDEQAAVFQLFQQA--TNNRRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPL 933
RS ++ PL+ + GVL + D+ + D+++ +++G ++ + + ++ ++ +L++AN K FLA ++H+LR + I+ ++L + + ++D+ AIQ H+ L D+ DLAK+ + L VAA V V R V++ E++ GL + D VR+ Q+++NL+SNAIK+ G V++R A +G + +EV D+GIG+ P+ A++FQ FQQ +N RR G+GLGLAI++ L ++HGG + V SELGKGSTF + LP+
Sbjct: 239 RSELALPLISHDKLLGVLDLQDDQVNGFRPEDIDIFNVLAGQIATALENAQLIEALEHTAAQLREANNQKSRFLANMSHELRTPLNSIIGYTEILLMGISGELPEAVMEDIG-AIQAGGQHLLRLINDILDLAKIEAGRMTLEKETVEVAALVEEVKTSSMSLLRNKNVSMST-EVEEGLPTLWVDHVRLSQVLTNLLSNAIKFTNEGK-VRVRAYQA-NGSVAIEVADSGIGMTPEGMASLFQEFQQVDDSNTRRATGTGLGLAITRHLVQMHGGEIVVASELGKGSTFTVKLPV 530
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A542I3D4_9MICC (Signal transduction histidine kinase n=5 Tax=unclassified Arthrobacter TaxID=235627 RepID=A0A542I3D4_9MICC) HSP 1 Score: 160 bits (404), Expect = 2.780e-41 Identity = 96/330 (29.09%), Postives = 182/330 (55.15%), Query Frame = 1
Query: 13 SLWSSEEENQPLGDDVELR-------------SVISTPLMDQHRSFGVLHV-WADRPYAYVDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQRRVDDPALKDLTRAIQDSVTH---MSSLTRDLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLEVMADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGA----GSGEMILEVQDNGIGIAPDEQAAVFQLFQQATN--NRRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPL 933
+LW+ E G++ E R S ++ P+ + + S G++ + DRP + ++L L++ V+G ++ +++S + +Q +V++L++ ++ K +FLA V H+LR + I+A ++Q + P +++ + + V + + +L D+ +++ G++ ++L+ + T+ LV A VT+ + E++AD V+++Q+ +NLVSNAIK+ +GG +++ GS + + D GIGI+ DE VF F +A+N N + G+GLGLAIS+ + + HGGR+EV+S LG G+T + LPL
Sbjct: 214 ALWAGTETLSAEGNEAEPRTDDKPVAAVAGAASTLAVPIGEGNSSLGIIWIAMMDRPRTWSSAELGLIQHVAGNAAYGLIQSHLISSQQQVVKQLRELDKAKTDFLATVNHELRTPLTSIMAYLDMIQESTEHPVSREVHQMLDIVVRNTERLRTLIEDMLSVSRGGLDNTEMHLAPVRLGHTLDLVAAALRPLATLQNVTIEVDPVPEDPEILADEVQLQQVFTNLVSNAIKFTPKGGRIEVGSESHATEDGSKWATVRIADTGIGISSDEINHVFTRFYRASNAMNGAIPGTGLGLAISKDIVDRHGGRIEVDSTLGAGTTVTVCLPL 543
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A538GN99_9ACTN (Histidine kinase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538GN99_9ACTN) HSP 1 Score: 160 bits (404), Expect = 3.130e-41 Identity = 92/239 (38.49%), Postives = 142/239 (59.41%), Query Frame = 1
Query: 235 QNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQRRV----DDPALKDLTRAIQDSVTHMSSLTRDLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLEVMADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGSGEMILEVQDNGIGIAPDEQAAVFQLFQQATNNRRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPLPP 939
Q L +L+ A+R K +FLA ++H+LR + I+ +++L ++ ++ L D+ ++ H+ SL D+ DLAK+ + L LS+ + +R SE A + V L + + AD R+RQI+ NLVSNA+K+ G V + R G++ + V D G GIA +E +F+ F+QAT+ +R +G+GLGL +SQ+L ELHGGRL VESE+G+GSTFRL LP+ P
Sbjct: 315 QRLYGQLETASRHKSDFLATMSHELRTPLNAIIGFSEVLHEQMFGELNERQLADVEDVLEAG-NHLLSLINDVLDLAKIEAGGMELELSEVAIPEVLRSAVSLHSERASRGGVELSLTTEPEEIAISADGRRVRQIVFNLVSNAVKFTPAEGRVDVSAR-LDDGQVEIAVADTGPGIAAEELETIFEEFKQATDGKRAEGTGLGLPLSQKLVELHGGRLWVESEVGRGSTFRLTLPVGP 551
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A535KS33_9CHLR (GAF domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535KS33_9CHLR) HSP 1 Score: 155 bits (392), Expect = 3.270e-41 Identity = 104/300 (34.67%), Postives = 163/300 (54.33%), Query Frame = 1
Query: 55 DVELRSVISTPLMDQHRSFGVLHVWADRPYAYVDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILAL-AQLLQRRVDDPALKDLTRAIQDSVTHMSSLTR---DLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLEVMADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGSGEMI-LEVQDNGIGIAPDEQAAVFQLFQQA--TNNRRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPL 933
+V RSV++ PL+ Q +S GV ++ D+P+ D LL+ V+ + I + + ++ L++ N +K +FLA VTH+LR + I++ A +L+ +D + IQ V LTR D+ DL+K+ + + + + + ++ V + A + L +D L V+AD RIRQI+ NLVSNA+K+ GG V IR E+I + V D GIGI+P +F+ F+QA + RR G+GLGL I+++L EL GG + VES LG+GSTF LP+
Sbjct: 41 EVGFRSVMAVPLLLQEQSIGVFILYDDKPHQVTSEDTFLLKNVAVQAAIAIQNALLFAEVKDKNAALERVNHLKSQFLATVTHELRTPLHSIISYGALILEGFLDGELTNEQEEHIQFMVRRAEDLTRLVDDMLDLSKIEADRLEVKVEPLCLEPCLKDVLNQLKPLANNKGLNLSLEMVDPHLTVLADSHRIRQIVLNLVSNALKFTESGG-VTIRCILLEDYELIRISVHDTGIGISPVALGYIFEAFRQADGSTTRRFGGTGLGLTIARKLIELQGGEVAVESILGQGSTFSFTLPV 339
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A533YJ62_9BACT (Response regulator n=2 Tax=unclassified Ignavibacteria TaxID=1798416 RepID=A0A533YJ62_9BACT) HSP 1 Score: 162 bits (410), Expect = 3.330e-41 Identity = 106/307 (34.53%), Postives = 171/307 (55.70%), Query Frame = 1
Query: 58 VELRSVISTPLMDQHRSFGVLHVWADRPYAYVDSDLELLELVSGYLSF----------LILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQ---RRVDDPALKDLTRAIQDSVTHMSSLTRDLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLE-VMADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGSGEMILEVQDNGIGIAPDEQAAVFQLFQQATNNR-RLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPL 933
++L+S+IS PLM Q+ GVL V + + YV +L+LL +++ LS + +++ +L+ E+ + AN FLA +H+LR + I+ + +L R V + D + I +S H+ L D+ DL+K+ + L+L PV+ V V + +Q + L ++ +E ++ D R +QI+ NLVSNAIKY+ + G V + R E+ +EV+D G+GI P++ A +F FQQ N R +G+GLGL IS++L ELHGG++ V+SE GKGSTFR +P+
Sbjct: 229 LKLKSLISLPLMVQNELQGVLEVLSPKVDQYVQEELKLLSIIANELSIGMSRKRLMDEITIKNIELENEKKRTDD---ANETLKRFLATFSHELRAPLNAIVGFSDILTSDLRTVPPEKVNDFMKNINESGKHLQGLINDILDLSKIEAGKMELHLDAYPVSYFVESVQRVMQAALQQKQAKLV-FDISPDVEQLVVDQTRFKQILVNLVSNAIKYSNKEGSVTVCIRRF-INEIEIEVKDQGLGIKPEDMARLFTAFQQGKNARVSSEGTGLGLVISRRLVELHGGQIWVDSEWGKGSTFRFRIPM 530 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11258.1.1 >prot_P-wetherbeei_contig11258.1.1 ID=prot_P-wetherbeei_contig11258.1.1|Name=mRNA_P-wetherbeei_contig11258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=313bp PRSASLWSSEEENQPLGDDVELRSVISTPLMDQHRSFGVLHVWADRPYAYback to top mRNA from alignment at P-wetherbeei_contig11258:429..1367- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11258.1.1 ID=mRNA_P-wetherbeei_contig11258.1.1|Name=mRNA_P-wetherbeei_contig11258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=939bp|location=Sequence derived from alignment at P-wetherbeei_contig11258:429..1367- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11258:429..1367- >mRNA_P-wetherbeei_contig11258.1.1 ID=mRNA_P-wetherbeei_contig11258.1.1|Name=mRNA_P-wetherbeei_contig11258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=939bp|location=Sequence derived from alignment at P-wetherbeei_contig11258:429..1367- (Phaeothamnion wetherbeei SAG_119_79)back to top |