mRNA_P-wetherbeei_contig11258.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11258.1.1
Unique NamemRNA_P-wetherbeei_contig11258.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A7X9AFB7_9BURK (Histidine kinase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AFB7_9BURK)

HSP 1 Score: 272 bits (695), Expect = 1.090e-83
Identity = 140/292 (47.95%), Postives = 209/292 (71.58%), Query Frame = 1
Query:   64 LRSVISTPLMDQHRSFGVLHVWADRPYAYVDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQRRV-DDPALKDLTRAIQDSVTHMSSLTRDLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLEVMADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGSGEMILEVQDNGIGIAPDEQAAVFQLFQQATNN-RRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPL 933
            +RS++S PL+ +    GVL+ W  RP+AY+DSDLEL+EL++G++S  I  + ++++EQ LV+EL++ NRI+DEFLAV THDLRN++QG+LA   +L  R  +DP L +L   +  + + M +L  DLHDLA+LGM AIRL+ ++  +      V  + +E+AR+ +V L   E +  L + ADP+R+RQ++SNLVSNAIKYNR GG V++  R     E +LEV+DNG+GI P+ Q A+F LF++ T++ R+ +GSGLGL I++QL +LHGG +E+ SE+ +GS FR+ LPL
Sbjct:  262 MRSLVSAPLLFRDECLGVLNFWCHRPHAYLDSDLELVELIAGHISAAIQSARRVEREQRLVEELREVNRIQDEFLAVATHDLRNALQGVLAYIGILAVRAGEDPVLAELVADLASASSGMKTLITDLHDLARLGMRAIRLHPTRLDLKNLALSVLDQHAEFAREEKVHLARPEQEPSLFLEADPIRLRQVLSNLVSNAIKYNRPGGRVEVSWRQEEQ-EAVLEVRDNGVGIKPEHQEAIFDLFRRVTSSSRKAEGSGLGLTITRQLVDLHGGCIELNSEVDRGSLFRIRLPL 552          
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A7C5ECA6_9CHLR (Response regulator n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5ECA6_9CHLR)

HSP 1 Score: 173 bits (439), Expect = 5.850e-45
Identity = 105/301 (34.88%), Postives = 172/301 (57.14%), Query Frame = 1
Query:   61 ELRSVISTPLMDQHRSFGVLHVWADRPYAYVDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQRRVDDPALK----DLTRAIQDSVTHMSSLTRDLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLEVMADPVRIRQIISNLVSNAIKYNRRGGWV---KIRGRGAGSGEMILEVQDNGIGIAPDEQAAVFQLFQQATNN--RRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPLP 936
            E R+  + PL    R  GVL + A++  A++  ++ +L+ ++  ++  I  +   +  Q  ++E+++ +R+K EFLA+++H+LR  +  I+  ++++ + +D P  +    DL  AI +S  H+  L  D+ DLAK+    + L   +  +A T++ V    S   +   V L     D    V ADP+R+RQ++ NL+SNA K+   G       ++   +G  E+ + V D G GIAP++QA +F+ F Q   +  R+  GSGLGLAIS+QL ELHGGR+ VESE+GKGS F   LPLP
Sbjct:  385 ETRAEAALPLRVGERIIGVLDLQANQVNAFLPEEIAVLQTLADQVAVAIDNARSYELAQQAIREMRELDRLKSEFLAMMSHELRTPLNSIIGFSRVILKGIDGPLTELQEQDLN-AIYNSGQHLLRLINDVLDLAKIEAGKMELAYDEVNIAETIQGVLPTISGVLKDKPVQLITNVADDIPIVRADPIRLRQVLINLLSNAAKFTEEGSITVEAHVQPSPSGGREVYISVTDTGPGIAPEDQAKLFKSFSQVDTSPTRKTGGSGLGLAISRQLVELHGGRIGVESEVGKGSKFYFTLPLP 684          
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A1Q7HL34_9CHLR (Histidine kinase domain-containing protein n=1 Tax=Chloroflexi bacterium 13_1_40CM_4_68_4 TaxID=1805077 RepID=A0A1Q7HL34_9CHLR)

HSP 1 Score: 163 bits (412), Expect = 2.280e-43
Identity = 100/296 (33.78%), Postives = 167/296 (56.42%), Query Frame = 1
Query:   58 VELRSVISTPLMDQHRSFGVLHVWADRPYAYVDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQRRVDDPALKDLTRAIQDSVTH---MSSLTRDLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLE-VMADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGSGEMILEVQDNGIGIAPDEQAAVFQLFQQATNNRRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPL 933
            + +R+V+  PLM +    GV+ +   R   + +  ++L+E  +   +  I  +    + Q   +EL+ A+R K EFLA ++H+LR  +  I   +++LQ ++  P        + D +     + SL  D+ DL+K+    + L  S+  +   +        E A +  ++LG +EL  GLE + AD  +++QI+ NL+SNA+K+   GG V + G     G + + V D GIGIAPDE+  +F+ FQQA + R  +G+GLGL ++++  ELHGG++ VESE+GKGSTFR  LP+
Sbjct:  123 MHVRTVLGVPLMREGEVAGVILLRRTRVAPFDEKQIQLVETFANQAAIAIENARLFNQIQEKSRELELASRHKSEFLANMSHELRTPLNAINGFSEVLQEQMAGPLNDRQVEYVSDILESGKLLLSLINDILDLSKVEAGRMELEPSEFSLFDVLTNALTLVRERAARQHISLG-LELQPGLERITADERKVKQIVVNLLSNAVKFTPDGGRVDVVGARR-DGALEVSVHDTGIGIAPDERERIFEEFQQAASARGREGTGLGLTLAKRFVELHGGKIWVESEVGKGSTFRFTLPI 416          
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A7C2J142_9BACT (GAF domain-containing protein n=1 Tax=candidate division NC10 bacterium TaxID=2072417 RepID=A0A7C2J142_9BACT)

HSP 1 Score: 167 bits (422), Expect = 7.240e-43
Identity = 110/331 (33.23%), Postives = 181/331 (54.68%), Query Frame = 1
Query:   34 ENQPLGDDVELRSVISTPLMDQHRSFGVLHVWA-DRPYAYVDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQRRVDDPA---LKDLTRAIQDSVTHMSSLTRDLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGP-IELDTGLEVMADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGS-----------------------GEMI-LEVQDNGIGIAPDEQAAVFQLFQQATNN--RRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPL 933
            E + L   + +RS++ TP++D+ R FGV+ V   DRP  +  +++ L ++++   S  ++ +   Q+ Q    +L++A++ K EFLA + H+LR  + GI+  ++L+  +   P+    +   RAIQ S  H+ +L  D+ DL+K+    + L+      A  V          A +S++TL   +E+  G+ + AD  R +QI+ NL+ NAIK+   GG V +  R   S                       GE + + V D GIGI P++Q  +F+ FQQ +++  R   G+GLGLA++++  E+HGGRL VESE+GKGSTF  VLPL
Sbjct:  461 EARDLLRSIGMRSLLVTPMLDRDRVFGVIKVAQFDRPRRFSANEIHLCQMLANQASIAMVNARLYQELQEKSAQLERASQHKSEFLASMAHELRTPLHGIMGFSELILEQPAGPSGDRQRRYARAIQVSGKHLLTLVNDILDLSKIEAGKMELHRENFLAADAVNEAWAIMQPLAAKSQITLTTDVEMSVGI-IFADLGRFKQILFNLLGNAIKFTSTGGRVTLTARRVDSPRGQTGDAPQPLDDLATRSVDRSGEWLEVRVTDTGIGIRPEDQERIFEQFQQVSSSVTREQSGTGLGLALARRFVEMHGGRLWVESEVGKGSTFIFVLPL 790          
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A1V5PDD8_9BACT (Sensor histidine kinase TmoS n=1 Tax=bacterium ADurb.Bin363 TaxID=1866927 RepID=A0A1V5PDD8_9BACT)

HSP 1 Score: 164 bits (415), Expect = 3.520e-42
Identity = 105/298 (35.23%), Postives = 171/298 (57.38%), Query Frame = 1
Query:   70 SVISTPLMDQHRSFGVLHVWADRPYAYVDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQR-RVDD--PALKDLTRAIQDSVTHMSSLTRDLHDLAKLGMEAIRLNLSKC-------PVAATVRLVTQEFSEYARQSEVTLGPIELDTGLEVMADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGSGEMILEVQDNGIGIAPDEQAAVFQLFQQATNN-RRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLP 930
            S+   P++ Q + FG++ + +++   +    + L+  V+  ++    R+   Q+E+ +V +L++AN++KDE++  ++H+LR  +  I+  + LL+  R+    P   +L   +  S  +M  L  DL DL+KL  + I LN  +         V  TVR++  E S       VT+     D    V  DP R+RQII NLV+NA+KYNR GG VKI  +      ++++V D GIGI  ++QA+VF+ F+Q     R+  G+GLGL+I++QL ELHGG + +ESEL +GSTF + LP
Sbjct:  240 SLCYVPMLYQDKCFGIIGLASNKKNYFTHDHVRLVTAVAKQVAIAFSRTLLYQREKEMVIKLKEANKLKDEYIGNISHELRTPLTAIIGFSYLLKGGRIGSVSPIQMELIEDVLTSAQNMLHLVEDLLDLSKLQAKKINLNKRETNLQVIIDEVITTVRIMADEIS-------VTIEKYFDDHFPNVYVDPDRMRQIILNLVTNAVKYNREGGSVKIFLQDEKE-FLVIKVLDTGIGIKQEDQASVFEQFRQLGGGIRKFRGTGLGLSITKQLVELHGGEILLESELARGSTFTIRLP 529          
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A838RLJ1_9CHLR (GAF domain-containing protein n=1 Tax=Ardenticatenales bacterium TaxID=2614248 RepID=A0A838RLJ1_9CHLR)

HSP 1 Score: 161 bits (407), Expect = 9.810e-42
Identity = 99/296 (33.45%), Postives = 169/296 (57.09%), Query Frame = 1
Query:   67 RSVISTPLMDQHRSFGVLHVWADRPYAYVDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQRRVD----DPALKDLTRAIQDSVTHMSSLTRDLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLEVM-ADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGSGEMILEVQDNGIGIAPDEQAAVFQLFQQA--TNNRRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPL 933
            RS ++ PL+   +  GVL +  D+   +   D+++  +++G ++  +  +  ++  ++   +L++AN  K  FLA ++H+LR  +  I+   ++L   +     +  ++D+  AIQ    H+  L  D+ DLAK+    + L      VAA V  V        R   V++   E++ GL  +  D VR+ Q+++NL+SNAIK+   G  V++R   A +G + +EV D+GIG+ P+  A++FQ FQQ   +N RR  G+GLGLAI++ L ++HGG + V SELGKGSTF + LP+
Sbjct:  239 RSELALPLISHDKLLGVLDLQDDQVNGFRPEDIDIFNVLAGQIATALENAQLIEALEHTAAQLREANNQKSRFLANMSHELRTPLNSIIGYTEILLMGISGELPEAVMEDIG-AIQAGGQHLLRLINDILDLAKIEAGRMTLEKETVEVAALVEEVKTSSMSLLRNKNVSMST-EVEEGLPTLWVDHVRLSQVLTNLLSNAIKFTNEGK-VRVRAYQA-NGSVAIEVADSGIGMTPEGMASLFQEFQQVDDSNTRRATGTGLGLAITRHLVQMHGGEIVVASELGKGSTFTVKLPV 530          
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A542I3D4_9MICC (Signal transduction histidine kinase n=5 Tax=unclassified Arthrobacter TaxID=235627 RepID=A0A542I3D4_9MICC)

HSP 1 Score: 160 bits (404), Expect = 2.780e-41
Identity = 96/330 (29.09%), Postives = 182/330 (55.15%), Query Frame = 1
Query:   13 SLWSSEEENQPLGDDVELR-------------SVISTPLMDQHRSFGVLHV-WADRPYAYVDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQRRVDDPALKDLTRAIQDSVTH---MSSLTRDLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLEVMADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGA----GSGEMILEVQDNGIGIAPDEQAAVFQLFQQATN--NRRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPL 933
            +LW+  E     G++ E R             S ++ P+ + + S G++ +   DRP  +  ++L L++ V+G  ++ +++S  +  +Q +V++L++ ++ K +FLA V H+LR  +  I+A   ++Q   + P  +++ + +   V +   + +L  D+  +++ G++   ++L+   +  T+ LV       A    VT+    +    E++AD V+++Q+ +NLVSNAIK+  +GG +++         GS    + + D GIGI+ DE   VF  F +A+N  N  + G+GLGLAIS+ + + HGGR+EV+S LG G+T  + LPL
Sbjct:  214 ALWAGTETLSAEGNEAEPRTDDKPVAAVAGAASTLAVPIGEGNSSLGIIWIAMMDRPRTWSSAELGLIQHVAGNAAYGLIQSHLISSQQQVVKQLRELDKAKTDFLATVNHELRTPLTSIMAYLDMIQESTEHPVSREVHQMLDIVVRNTERLRTLIEDMLSVSRGGLDNTEMHLAPVRLGHTLDLVAAALRPLATLQNVTIEVDPVPEDPEILADEVQLQQVFTNLVSNAIKFTPKGGRIEVGSESHATEDGSKWATVRIADTGIGISSDEINHVFTRFYRASNAMNGAIPGTGLGLAISKDIVDRHGGRIEVDSTLGAGTTVTVCLPL 543          
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A538GN99_9ACTN (Histidine kinase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538GN99_9ACTN)

HSP 1 Score: 160 bits (404), Expect = 3.130e-41
Identity = 92/239 (38.49%), Postives = 142/239 (59.41%), Query Frame = 1
Query:  235 QNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQRRV----DDPALKDLTRAIQDSVTHMSSLTRDLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLEVMADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGSGEMILEVQDNGIGIAPDEQAAVFQLFQQATNNRRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPLPP 939
            Q L  +L+ A+R K +FLA ++H+LR  +  I+  +++L  ++    ++  L D+   ++    H+ SL  D+ DLAK+    + L LS+  +   +R      SE A +  V L        + + AD  R+RQI+ NLVSNA+K+    G V +  R    G++ + V D G GIA +E   +F+ F+QAT+ +R +G+GLGL +SQ+L ELHGGRL VESE+G+GSTFRL LP+ P
Sbjct:  315 QRLYGQLETASRHKSDFLATMSHELRTPLNAIIGFSEVLHEQMFGELNERQLADVEDVLEAG-NHLLSLINDVLDLAKIEAGGMELELSEVAIPEVLRSAVSLHSERASRGGVELSLTTEPEEIAISADGRRVRQIVFNLVSNAVKFTPAEGRVDVSAR-LDDGQVEIAVADTGPGIAAEELETIFEEFKQATDGKRAEGTGLGLPLSQKLVELHGGRLWVESEVGRGSTFRLTLPVGP 551          
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A535KS33_9CHLR (GAF domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535KS33_9CHLR)

HSP 1 Score: 155 bits (392), Expect = 3.270e-41
Identity = 104/300 (34.67%), Postives = 163/300 (54.33%), Query Frame = 1
Query:   55 DVELRSVISTPLMDQHRSFGVLHVWADRPYAYVDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILAL-AQLLQRRVDDPALKDLTRAIQDSVTHMSSLTR---DLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLEVMADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGSGEMI-LEVQDNGIGIAPDEQAAVFQLFQQA--TNNRRLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPL 933
            +V  RSV++ PL+ Q +S GV  ++ D+P+     D  LL+ V+   +  I  +    + ++    L++ N +K +FLA VTH+LR  +  I++  A +L+  +D     +    IQ  V     LTR   D+ DL+K+  + + + +    +   ++ V  +    A    + L    +D  L V+AD  RIRQI+ NLVSNA+K+   GG V IR       E+I + V D GIGI+P     +F+ F+QA  +  RR  G+GLGL I+++L EL GG + VES LG+GSTF   LP+
Sbjct:   41 EVGFRSVMAVPLLLQEQSIGVFILYDDKPHQVTSEDTFLLKNVAVQAAIAIQNALLFAEVKDKNAALERVNHLKSQFLATVTHELRTPLHSIISYGALILEGFLDGELTNEQEEHIQFMVRRAEDLTRLVDDMLDLSKIEADRLEVKVEPLCLEPCLKDVLNQLKPLANNKGLNLSLEMVDPHLTVLADSHRIRQIVLNLVSNALKFTESGG-VTIRCILLEDYELIRISVHDTGIGISPVALGYIFEAFRQADGSTTRRFGGTGLGLTIARKLIELQGGEVAVESILGQGSTFSFTLPV 339          
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Match: A0A533YJ62_9BACT (Response regulator n=2 Tax=unclassified Ignavibacteria TaxID=1798416 RepID=A0A533YJ62_9BACT)

HSP 1 Score: 162 bits (410), Expect = 3.330e-41
Identity = 106/307 (34.53%), Postives = 171/307 (55.70%), Query Frame = 1
Query:   58 VELRSVISTPLMDQHRSFGVLHVWADRPYAYVDSDLELLELVSGYLSF----------LILRSWQLQKEQNLVQELQQANRIKDEFLAVVTHDLRNSIQGILALAQLLQ---RRVDDPALKDLTRAIQDSVTHMSSLTRDLHDLAKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLE-VMADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGSGEMILEVQDNGIGIAPDEQAAVFQLFQQATNNR-RLDGSGLGLAISQQLAELHGGRLEVESELGKGSTFRLVLPL 933
            ++L+S+IS PLM Q+   GVL V + +   YV  +L+LL +++  LS           + +++ +L+ E+    +   AN     FLA  +H+LR  +  I+  + +L    R V    + D  + I +S  H+  L  D+ DL+K+    + L+L   PV+  V  V +      +Q +  L   ++   +E ++ D  R +QI+ NLVSNAIKY+ + G V +  R     E+ +EV+D G+GI P++ A +F  FQQ  N R   +G+GLGL IS++L ELHGG++ V+SE GKGSTFR  +P+
Sbjct:  229 LKLKSLISLPLMVQNELQGVLEVLSPKVDQYVQEELKLLSIIANELSIGMSRKRLMDEITIKNIELENEKKRTDD---ANETLKRFLATFSHELRAPLNAIVGFSDILTSDLRTVPPEKVNDFMKNINESGKHLQGLINDILDLSKIEAGKMELHLDAYPVSYFVESVQRVMQAALQQKQAKLV-FDISPDVEQLVVDQTRFKQILVNLVSNAIKYSNKEGSVTVCIRRF-INEIEIEVKDQGLGIKPEDMARLFTAFQQGKNARVSSEGTGLGLVISRRLVELHGGQIWVDSEWGKGSTFRFRIPM 530          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11258.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9AFB7_9BURK1.090e-8347.95Histidine kinase n=1 Tax=Burkholderiales bacterium... [more]
A0A7C5ECA6_9CHLR5.850e-4534.88Response regulator n=1 Tax=Anaerolineae bacterium ... [more]
A0A1Q7HL34_9CHLR2.280e-4333.78Histidine kinase domain-containing protein n=1 Tax... [more]
A0A7C2J142_9BACT7.240e-4333.23GAF domain-containing protein n=1 Tax=candidate di... [more]
A0A1V5PDD8_9BACT3.520e-4235.23Sensor histidine kinase TmoS n=1 Tax=bacterium ADu... [more]
A0A838RLJ1_9CHLR9.810e-4233.45GAF domain-containing protein n=1 Tax=Ardenticaten... [more]
A0A542I3D4_9MICC2.780e-4129.09Signal transduction histidine kinase n=5 Tax=uncla... [more]
A0A538GN99_9ACTN3.130e-4138.49Histidine kinase n=1 Tax=Actinomycetia bacterium T... [more]
A0A535KS33_9CHLR3.270e-4134.67GAF domain-containing protein n=1 Tax=Chloroflexi ... [more]
A0A533YJ62_9BACT3.330e-4134.53Response regulator n=2 Tax=unclassified Ignavibact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11258contigP-wetherbeei_contig11258:429..1367 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1348657.M622_06340
PFAMsHAMP,HATPase_c,HisKA
Model size939
Max annot lvl206389|Rhodocyclales
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.71e-38
EggNOG OGsCOG5002@1|root,COG5002@2|Bacteria,1R5EN@1224|Proteobacteria,2WGTX@28216|Betaproteobacteria,2KZPG@206389|Rhodocyclales
DescriptionHistidine kinase
Cds size939
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185904.3824632-CDS-P-wetherbeei_contig11258:428..13671683185904.3824632-CDS-P-wetherbeei_contig11258:428..1367Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11258 429..1367 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11258.1.1prot_P-wetherbeei_contig11258.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11258 429..1367 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11258.1.1

>prot_P-wetherbeei_contig11258.1.1 ID=prot_P-wetherbeei_contig11258.1.1|Name=mRNA_P-wetherbeei_contig11258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=313bp
PRSASLWSSEEENQPLGDDVELRSVISTPLMDQHRSFGVLHVWADRPYAY
VDSDLELLELVSGYLSFLILRSWQLQKEQNLVQELQQANRIKDEFLAVVT
HDLRNSIQGILALAQLLQRRVDDPALKDLTRAIQDSVTHMSSLTRDLHDL
AKLGMEAIRLNLSKCPVAATVRLVTQEFSEYARQSEVTLGPIELDTGLEV
MADPVRIRQIISNLVSNAIKYNRRGGWVKIRGRGAGSGEMILEVQDNGIG
IAPDEQAAVFQLFQQATNNRRLDGSGLGLAISQQLAELHGGRLEVESELG
KGSTFRLVLPLPP
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mRNA from alignment at P-wetherbeei_contig11258:429..1367-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11258.1.1 ID=mRNA_P-wetherbeei_contig11258.1.1|Name=mRNA_P-wetherbeei_contig11258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=939bp|location=Sequence derived from alignment at P-wetherbeei_contig11258:429..1367- (Phaeothamnion wetherbeei SAG_119_79)
CCCCGCAGCGCGTCTCTTTGGTCCTCGGAAGAGGAAAATCAGCCGCTCGG TGATGACGTCGAACTTCGCTCCGTCATTTCTACGCCCCTGATGGATCAGC ATCGCAGCTTCGGGGTGCTGCACGTCTGGGCCGACCGGCCTTACGCTTAC GTAGATTCCGATCTAGAACTGCTCGAGCTCGTTTCCGGCTATCTCTCCTT CTTGATTTTGCGCTCCTGGCAGCTGCAAAAAGAGCAGAATCTGGTCCAAG AATTGCAGCAGGCCAATCGTATCAAAGACGAATTTCTGGCGGTCGTTACC CACGATCTACGCAACTCGATACAAGGAATTCTGGCTCTCGCACAGTTGCT GCAACGGCGGGTCGACGATCCCGCGCTCAAGGACCTGACGCGGGCCATCC AAGACAGCGTGACCCACATGTCCAGTCTCACTCGCGATCTCCACGACCTG GCCAAACTCGGCATGGAAGCCATTCGCCTCAACCTCTCCAAATGCCCGGT GGCAGCGACCGTGCGGCTCGTAACTCAGGAATTCAGCGAATACGCGCGTC AGTCCGAAGTGACGCTGGGACCCATCGAGCTCGACACGGGACTGGAGGTC ATGGCCGACCCGGTGCGTATCCGCCAGATTATTTCTAACCTCGTCTCCAA CGCCATAAAATACAATCGGCGCGGCGGCTGGGTCAAAATTCGCGGCCGCG GCGCAGGGTCAGGCGAGATGATCCTGGAGGTCCAGGATAACGGCATTGGT ATCGCGCCCGACGAACAAGCCGCCGTGTTTCAGCTCTTCCAGCAGGCCAC CAACAATCGGCGCCTGGATGGAAGCGGCCTGGGCCTGGCGATTTCGCAGC AGTTGGCCGAGCTCCACGGAGGACGCTTAGAGGTGGAGAGCGAGCTCGGC AAGGGCTCGACCTTTCGTCTGGTTTTGCCGCTCCCACCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11258:429..1367-

>mRNA_P-wetherbeei_contig11258.1.1 ID=mRNA_P-wetherbeei_contig11258.1.1|Name=mRNA_P-wetherbeei_contig11258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=939bp|location=Sequence derived from alignment at P-wetherbeei_contig11258:429..1367- (Phaeothamnion wetherbeei SAG_119_79)
CCCCGCAGCGCGTCTCTTTGGTCCTCGGAAGAGGAAAATCAGCCGCTCGG
TGATGACGTCGAACTTCGCTCCGTCATTTCTACGCCCCTGATGGATCAGC
ATCGCAGCTTCGGGGTGCTGCACGTCTGGGCCGACCGGCCTTACGCTTAC
GTAGATTCCGATCTAGAACTGCTCGAGCTCGTTTCCGGCTATCTCTCCTT
CTTGATTTTGCGCTCCTGGCAGCTGCAAAAAGAGCAGAATCTGGTCCAAG
AATTGCAGCAGGCCAATCGTATCAAAGACGAATTTCTGGCGGTCGTTACC
CACGATCTACGCAACTCGATACAAGGAATTCTGGCTCTCGCACAGTTGCT
GCAACGGCGGGTCGACGATCCCGCGCTCAAGGACCTGACGCGGGCCATCC
AAGACAGCGTGACCCACATGTCCAGTCTCACTCGCGATCTCCACGACCTG
GCCAAACTCGGCATGGAAGCCATTCGCCTCAACCTCTCCAAATGCCCGGT
GGCAGCGACCGTGCGGCTCGTAACTCAGGAATTCAGCGAATACGCGCGTC
AGTCCGAAGTGACGCTGGGACCCATCGAGCTCGACACGGGACTGGAGGTC
ATGGCCGACCCGGTGCGTATCCGCCAGATTATTTCTAACCTCGTCTCCAA
CGCCATAAAATACAATCGGCGCGGCGGCTGGGTCAAAATTCGCGGCCGCG
GCGCAGGGTCAGGCGAGATGATCCTGGAGGTCCAGGATAACGGCATTGGT
ATCGCGCCCGACGAACAAGCCGCCGTGTTTCAGCTCTTCCAGCAGGCCAC
CAACAATCGGCGCCTGGATGGAAGCGGCCTGGGCCTGGCGATTTCGCAGC
AGTTGGCCGAGCTCCACGGAGGACGCTTAGAGGTGGAGAGCGAGCTCGGC
AAGGGCTCGACCTTTCGTCTGGTTTTGCCGCTCCCACCT
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