mRNA_P-wetherbeei_contig1123.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1123.3.1 vs. uniprot
Match: A0A7S3GER5_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GER5_9EUKA) HSP 1 Score: 84.0 bits (206), Expect = 4.330e-13 Identity = 53/171 (30.99%), Postives = 88/171 (51.46%), Query Frame = 2
Query: 1388 TTSLGEFFHDYLRDRVKSHGLVVEWGYNITNALEAYTDVNADLRMFLLVLNKELPEEIHDDLQLRLAALLNALEAEDLTANSGAVSGQVPLQVLQKVLQTEFPTKPRQNVEKLLALAKQETVGK------NEAVPYLQLFEEDEDGRGSKLGEALKDQHISELLAYARHLR 1882
T + EF + YL R +V EWGYNI ++E Y +AD+ +F VLN EL E ++ + + L+A + D N G +G+V ++L++ FP K V++L + + K + V Y LF++D +G K EA++DQH+SE+L + ++
Sbjct: 469 TDMMSEFIYLYLLKRFGIQAMVAEWGYNILFSVERYK-YDADIELFQKVLNGELDEAVYHEQMTMINRFLDACKKVDEMTNGGRTTGKVAKPDFYRLLRSFFPNKRIDFVQELKISLESDQAEKWMGQKLGQDVEYKLLFKDDREGNQGKFAEAVRDQHLSEMLEFVNAVK 638 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1123.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1123.3.1 >prot_P-wetherbeei_contig1123.3.1 ID=prot_P-wetherbeei_contig1123.3.1|Name=mRNA_P-wetherbeei_contig1123.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=623bp MADSGPSLLRLQVYREALAQLADGLGSYAPFLREVQAEYDGVIEVCQGQMback to top mRNA from alignment at P-wetherbeei_contig1123:1619..7373+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1123.3.1 ID=mRNA_P-wetherbeei_contig1123.3.1|Name=mRNA_P-wetherbeei_contig1123.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5755bp|location=Sequence derived from alignment at P-wetherbeei_contig1123:1619..7373+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1123:1619..7373+ >mRNA_P-wetherbeei_contig1123.3.1 ID=mRNA_P-wetherbeei_contig1123.3.1|Name=mRNA_P-wetherbeei_contig1123.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1869bp|location=Sequence derived from alignment at P-wetherbeei_contig1123:1619..7373+ (Phaeothamnion wetherbeei SAG_119_79)back to top |