mRNA_P-wetherbeei_contig11229.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11229.1.1 vs. uniprot
Match: A0A537C1Z1_9PROT (Tetratricopeptide repeat protein n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537C1Z1_9PROT) HSP 1 Score: 157 bits (398), Expect = 2.030e-47 Identity = 72/95 (75.79%), Postives = 88/95 (92.63%), Query Frame = 1
Query: 1 VASNPQDANYNNLYAYTMRKGPNPNMNLVFKYYNEALRIDPNHRNAHEYIGEAYLMVGNVAKAKEHLAVLDRLCTFGCEEYSDLKKAIAGYEARK 285
+A NP +A+Y+NLYAY++RKGPNP+M+LVFK+YNEALRIDP+HR AHEY+GEAYLMVGNVAKAKEHL+VLD+LC F C+EYSDLKKAIA YE ++
Sbjct: 59 LARNPDNADYHNLYAYSIRKGPNPDMSLVFKHYNEALRIDPDHRGAHEYLGEAYLMVGNVAKAKEHLSVLDKLCFFPCDEYSDLKKAIADYERKQ 153
BLAST of mRNA_P-wetherbeei_contig11229.1.1 vs. uniprot
Match: A0A1F4F581_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4F581_9PROT) HSP 1 Score: 154 bits (389), Expect = 3.590e-46 Identity = 71/95 (74.74%), Postives = 85/95 (89.47%), Query Frame = 1
Query: 1 VASNPQDANYNNLYAYTMRKGPNPNMNLVFKYYNEALRIDPNHRNAHEYIGEAYLMVGNVAKAKEHLAVLDRLCTFGCEEYSDLKKAIAGYEARK 285
VA +P +A Y+NLYAY+MRKGPNPNM+LVFK+YNEAL++DP HR AHEYIGEA+L +GN+AKAKEHLA LD LC FGCEE+SDLKKAIA YEA++
Sbjct: 61 VAKDPGNAGYHNLYAYSMRKGPNPNMDLVFKHYNEALKLDPKHRGAHEYIGEAFLKIGNLAKAKEHLARLDSLCFFGCEEFSDLKKAIAEYEAKQ 155
BLAST of mRNA_P-wetherbeei_contig11229.1.1 vs. uniprot
Match: A0A3N7J2W8_9BURK (Tetratricopeptide repeat protein n=2 Tax=Albitalea terrae TaxID=2496871 RepID=A0A3N7J2W8_9BURK) HSP 1 Score: 149 bits (376), Expect = 2.750e-44 Identity = 69/96 (71.88%), Postives = 84/96 (87.50%), Query Frame = 1
Query: 1 VASNPQDANYNNLYAYTMRKGPNPNMNLVFKYYNEALRIDPNHRNAHEYIGEAYLMVGNVAKAKEHLAVLDRLCTFGCEEYSDLKKAIAGYEARKK 288
+A+ P +A+Y+NLYAY+MRKGPNP+M+LVFK+YNEALRI+P H AHEYIGEAYL VG++AKAKEHLA L+++C FGCEEYSDLKK IA YEA K
Sbjct: 55 LAAKPNNADYHNLYAYSMRKGPNPDMDLVFKHYNEALRINPKHTGAHEYIGEAYLQVGDLAKAKEHLAALNKICFFGCEEYSDLKKDIAEYEASHK 150
BLAST of mRNA_P-wetherbeei_contig11229.1.1 vs. uniprot
Match: A0A1F3YTB5_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YTB5_9PROT) HSP 1 Score: 146 bits (368), Expect = 1.800e-43 Identity = 66/92 (71.74%), Postives = 80/92 (86.96%), Query Frame = 1
Query: 1 VASNPQDANYNNLYAYTMRKGPNPNMNLVFKYYNEALRIDPNHRNAHEYIGEAYLMVGNVAKAKEHLAVLDRLCTFGCEEYSDLKKAIAGYE 276
VA PQ+A+Y+NLYAY+MRKG P+M+LVF++YNEALR+DP HR AHEYIGEAYLM GN+AKAKEHLA LD LCTFGC EY++LK+ +A YE
Sbjct: 24 VAGTPQNADYHNLYAYSMRKGAKPSMDLVFRHYNEALRLDPRHRGAHEYIGEAYLMSGNLAKAKEHLAQLDNLCTFGCAEYTELKREVAAYE 115
BLAST of mRNA_P-wetherbeei_contig11229.1.1 vs. uniprot
Match: UPI000BBC9C35 (hypothetical protein n=1 Tax=Polaromonas sp. AET17H-212 TaxID=1977061 RepID=UPI000BBC9C35) HSP 1 Score: 146 bits (368), Expect = 5.280e-43 Identity = 66/96 (68.75%), Postives = 84/96 (87.50%), Query Frame = 1
Query: 1 VASNPQDANYNNLYAYTMRKGPNPNMNLVFKYYNEALRIDPNHRNAHEYIGEAYLMVGNVAKAKEHLAVLDRLCTFGCEEYSDLKKAIAGYEARKK 288
+A++PQ+A+Y+NLYAY++RKGP+P+M LVFK+Y EALR++P HR AHEY+GEAYLMV + KAK+HLA LD+LC CEEYSDLKKAIA YEAR+K
Sbjct: 60 LAASPQNADYHNLYAYSIRKGPSPDMALVFKHYGEALRLNPKHRGAHEYVGEAYLMVNDATKAKQHLAALDKLCFLPCEEYSDLKKAIAAYEARRK 155
BLAST of mRNA_P-wetherbeei_contig11229.1.1 vs. uniprot
Match: UPI0019CB5F6E (Tetratricopeptide repeat protein n=1 Tax=Rhizobacter sp. TaxID=1909292 RepID=UPI0019CB5F6E) HSP 1 Score: 145 bits (367), Expect = 1.180e-42 Identity = 66/93 (70.97%), Postives = 79/93 (84.95%), Query Frame = 1
Query: 1 VASNPQDANYNNLYAYTMRKGPNPNMNLVFKYYNEALRIDPNHRNAHEYIGEAYLMVGNVAKAKEHLAVLDRLCTFGCEEYSDLKKAIAGYEA 279
+A P +A+Y+NLYAY++RKGPNP+M VF +Y +ALRIDP HR AHEY GEAYLM G++ KAKEHLA LDRLCTFGCEEY+DLKKA+A YEA
Sbjct: 75 LAGTPNNADYHNLYAYSLRKGPNPDMTAVFSHYADALRIDPKHRGAHEYSGEAYLMAGDLPKAKEHLAALDRLCTFGCEEYTDLKKAVAQYEA 167
BLAST of mRNA_P-wetherbeei_contig11229.1.1 vs. uniprot
Match: UPI0016644548 (tetratricopeptide repeat protein n=1 Tax=Polaromonas eurypsychrophila TaxID=1614635 RepID=UPI0016644548) HSP 1 Score: 145 bits (365), Expect = 1.600e-42 Identity = 66/96 (68.75%), Postives = 84/96 (87.50%), Query Frame = 1
Query: 1 VASNPQDANYNNLYAYTMRKGPNPNMNLVFKYYNEALRIDPNHRNAHEYIGEAYLMVGNVAKAKEHLAVLDRLCTFGCEEYSDLKKAIAGYEARKK 288
+ S+PQ+A+Y+NLYAY++RKG NPNM+LVFK+Y EALRI+P HR AHEY+GEAYLMV +V KAK+HLA LD+LC CEE++DLKKAIA YEA++K
Sbjct: 62 LRSSPQNADYHNLYAYSIRKGANPNMDLVFKHYGEALRINPKHRGAHEYVGEAYLMVNDVPKAKQHLAALDKLCFMPCEEHTDLKKAIAAYEAKRK 157
BLAST of mRNA_P-wetherbeei_contig11229.1.1 vs. uniprot
Match: A0A1F4E410_9PROT (Uncharacterized protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4E410_9PROT) HSP 1 Score: 144 bits (364), Expect = 2.210e-42 Identity = 67/96 (69.79%), Postives = 83/96 (86.46%), Query Frame = 1
Query: 1 VASNPQDANYNNLYAYTMRKGPNPNMNLVFKYYNEALRIDPNHRNAHEYIGEAYLMVGNVAKAKEHLAVLDRLCTFGCEEYSDLKKAIAGYEARKK 288
+A +P +A+Y+NLYAY +RKGPNP+++ VFK+Y+EALRI PNHR AHEYIGEAYL+ GN+AKAKEHL+ LDR+C FGCEEYS LKKAIA EA +K
Sbjct: 62 LARDPANADYHNLYAYALRKGPNPSLDQVFKHYHEALRISPNHRGAHEYIGEAYLLQGNLAKAKEHLSALDRMCFFGCEEYSMLKKAIAESEATRK 157
BLAST of mRNA_P-wetherbeei_contig11229.1.1 vs. uniprot
Match: A0A521VH85_9PROT (Tetratricopeptide repeat protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VH85_9PROT) HSP 1 Score: 143 bits (360), Expect = 9.510e-42 Identity = 65/92 (70.65%), Postives = 81/92 (88.04%), Query Frame = 1
Query: 1 VASNPQDANYNNLYAYTMRKGPNPNMNLVFKYYNEALRIDPNHRNAHEYIGEAYLMVGNVAKAKEHLAVLDRLCTFGCEEYSDLKKAIAGYE 276
+ +P++A+Y+NLYAY +RKGPNP+++LVFK+Y+EALRIDP HR AHEYIGEAYLM GN+AKAKEHL LDR+C FGCEEY+ LKKAIA +E
Sbjct: 62 LGKDPRNADYHNLYAYAIRKGPNPSLDLVFKHYHEALRIDPKHRGAHEYIGEAYLMQGNLAKAKEHLDALDRMCFFGCEEYTLLKKAIADFE 153
BLAST of mRNA_P-wetherbeei_contig11229.1.1 vs. uniprot
Match: A0A521YPW7_9PROT (Tetratricopeptide repeat protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YPW7_9PROT) HSP 1 Score: 142 bits (358), Expect = 1.220e-41 Identity = 66/92 (71.74%), Postives = 80/92 (86.96%), Query Frame = 1
Query: 1 VASNPQDANYNNLYAYTMRKGPNPNMNLVFKYYNEALRIDPNHRNAHEYIGEAYLMVGNVAKAKEHLAVLDRLCTFGCEEYSDLKKAIAGYE 276
V +P +A+Y+N+YAYT+RKG +P+M+LVFK+YNEALRIDPNHR AHEY+GEAYLMV N A+AKEHLA LD+LC F C E+SDLKKAIA YE
Sbjct: 47 VQKDPGNADYHNMYAYTIRKGAHPDMSLVFKHYNEALRIDPNHRGAHEYLGEAYLMVNNPARAKEHLAALDKLCFFPCSEHSDLKKAIAEYE 138 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11229.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11229.1.1 >prot_P-wetherbeei_contig11229.1.1 ID=prot_P-wetherbeei_contig11229.1.1|Name=mRNA_P-wetherbeei_contig11229.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=97bp VASNPQDANYNNLYAYTMRKGPNPNMNLVFKYYNEALRIDPNHRNAHEYIback to top mRNA from alignment at P-wetherbeei_contig11229:6..296+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11229.1.1 ID=mRNA_P-wetherbeei_contig11229.1.1|Name=mRNA_P-wetherbeei_contig11229.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=291bp|location=Sequence derived from alignment at P-wetherbeei_contig11229:6..296+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11229:6..296+ >mRNA_P-wetherbeei_contig11229.1.1 ID=mRNA_P-wetherbeei_contig11229.1.1|Name=mRNA_P-wetherbeei_contig11229.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=291bp|location=Sequence derived from alignment at P-wetherbeei_contig11229:6..296+ (Phaeothamnion wetherbeei SAG_119_79)back to top |