mRNA_P-wetherbeei_contig11228.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11228.1.1 vs. uniprot
Match: D8LL66_ECTSI (FYVE, RhoGEF and PH domain containing 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL66_ECTSI) HSP 1 Score: 73.6 bits (179), Expect = 4.390e-12 Identity = 40/77 (51.95%), Postives = 49/77 (63.64%), Query Frame = 2
Query: 329 MADSSSSSCVLCDMPFTLTNRRHHCRACFMLVCSKCSARTYKL------GDSSKGRTTQ-QRVCEACFASLDATRQV 538
M D SS SC+LCD FT TNR HHCRAC LVCS CS+ +KL G S GR +RVC+ C+ +L AT++V
Sbjct: 1 MDDDSSPSCLLCDALFTFTNRGHHCRACLKLVCSACSSNMWKLEAGRSRGYGSAGRRAAFKRVCDKCYGTLVATKEV 77
BLAST of mRNA_P-wetherbeei_contig11228.1.1 vs. uniprot
Match: Q38DK7_TRYB2 (Zinc finger protein, putative n=4 Tax=Trypanozoon TaxID=39700 RepID=Q38DK7_TRYB2) HSP 1 Score: 67.4 bits (163), Expect = 8.810e-10 Identity = 34/69 (49.28%), Postives = 44/69 (63.77%), Query Frame = 2
Query: 317 RGE-WMADSSSSSCVLCDMPFTLTNRRHHCRACFMLVCSKCSARTYKLGDSSKGRTTQQRVCEACFASL 520
+GE W DS S C C++ F+LT RRHHCR C ++VCSKCS Y++ SS T +RVC CF +L
Sbjct: 7 KGENWQKDSDVSGCCKCNVSFSLTTRRHHCRKCGLVVCSKCSR--YRINLSSHDSDTPKRVCRHCFHTL 73
BLAST of mRNA_P-wetherbeei_contig11228.1.1 vs. uniprot
Match: A0A7J7J309_BUGNE (PLEKHF2 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7J309_BUGNE) HSP 1 Score: 66.2 bits (160), Expect = 1.730e-9 Identity = 28/66 (42.42%), Postives = 42/66 (63.64%), Query Frame = 2
Query: 326 WMADSSSSSCVLCDMPFTLTNRRHHCRACFMLVCSKCSARTYKLGDSSKGRTTQQRVCEACFASLD 523
W+ DS +++C++C+ PFT+ NRRHHCR C +VC CS + + +K QRVC+ CF L+
Sbjct: 149 WIPDSEANACMICNTPFTILNRRHHCRKCGKVVCDDCSKQRWSFPQQAKQ---PQRVCDNCFKELE 211
BLAST of mRNA_P-wetherbeei_contig11228.1.1 vs. uniprot
Match: UPI00084F4797 (zinc finger FYVE domain-containing protein 16-like n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=UPI00084F4797) HSP 1 Score: 63.9 bits (154), Expect = 2.270e-9 Identity = 30/62 (48.39%), Postives = 41/62 (66.13%), Query Frame = 2
Query: 326 WMADSSSSSCVLCDMPFTLTNRRHHCRACFMLVCSKCSARTYKLGDSSKGRTTQQRVCEACF 511
W+ DS +SSC+LCD+ FT+ RRHHCRAC ++C+KC Y+L +G RVC +CF
Sbjct: 46 WVPDSDASSCMLCDVKFTVLKRRHHCRACGKVLCNKCCNMKYRL--EYQGNI-DSRVCVSCF 104
BLAST of mRNA_P-wetherbeei_contig11228.1.1 vs. uniprot
Match: UPI001EFF615C (zinc finger FYVE domain-containing protein 16 isoform X1 n=16 Tax=Vespa TaxID=7443 RepID=UPI001EFF615C) HSP 1 Score: 67.0 bits (162), Expect = 2.960e-9 Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 2
Query: 326 WMADSSSSSCVLCDMPFTLTNRRHHCRACFMLVCSKCSARTYKLGDSSKGRTTQQRVCEACF 511
W+ DS++SSC+LCD+ FT+ RRHHCRAC ++CSKC YKL +G RVC AC+
Sbjct: 764 WIPDSNASSCMLCDLKFTVLKRRHHCRACGKVLCSKCCNMKYKL--EYQGNI-HSRVCVACY 822
BLAST of mRNA_P-wetherbeei_contig11228.1.1 vs. uniprot
Match: A0A834NXL7_VESPE (FYVE-type domain-containing protein n=9 Tax=Vespula TaxID=7451 RepID=A0A834NXL7_VESPE) HSP 1 Score: 66.6 bits (161), Expect = 4.010e-9 Identity = 32/62 (51.61%), Postives = 41/62 (66.13%), Query Frame = 2
Query: 326 WMADSSSSSCVLCDMPFTLTNRRHHCRACFMLVCSKCSARTYKLGDSSKGRTTQQRVCEACF 511
W+ DS +SSC+LCD+ FT+ RRHHCRAC ++CSKC YKL +G RVC AC+
Sbjct: 767 WIPDSDASSCMLCDLKFTVLKRRHHCRACGKVLCSKCCNMKYKL--EYQGNI-HSRVCVACY 825
BLAST of mRNA_P-wetherbeei_contig11228.1.1 vs. uniprot
Match: A0A7S2S812_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S812_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 4.010e-9 Identity = 25/67 (37.31%), Postives = 43/67 (64.18%), Query Frame = 2
Query: 311 PSRGEWMADSSSSSCVLCDMPFTLTNRRHHCRACFMLVCSKCSARTYKLGDSSKGRTTQQRVCEACF 511
P + W+ D SC +CD+ F+++NRRHHCR+C + C+ C+ ++ +L + +QRVCE+C+
Sbjct: 18 PDQSHWVKDEFVLSCGVCDVKFSMSNRRHHCRSCGEVFCAACTGKSTELPHLGYPKGQRQRVCESCY 84
BLAST of mRNA_P-wetherbeei_contig11228.1.1 vs. uniprot
Match: UPI00073D713C (zinc finger FYVE domain-containing protein 9 isoform X1 n=6 Tax=Polistes dominula TaxID=743375 RepID=UPI00073D713C) HSP 1 Score: 65.1 bits (157), Expect = 1.340e-8 Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 2
Query: 326 WMADSSSSSCVLCDMPFTLTNRRHHCRACFMLVCSKCSARTYKLGDSSKGRTTQQRVCEACF 511
W+ DS +SSC+LCD+ FT+ RRHHCRAC ++CSKC Y+L +G RVC AC+
Sbjct: 785 WIPDSDASSCMLCDIKFTVLKRRHHCRACGKVLCSKCCNMKYRL--EYQGNI-HSRVCVACY 843
BLAST of mRNA_P-wetherbeei_contig11228.1.1 vs. uniprot
Match: A0A8J4UZ22_9MYCE (FYVE-type domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UZ22_9MYCE) HSP 1 Score: 64.7 bits (156), Expect = 1.460e-8 Identity = 31/72 (43.06%), Postives = 41/72 (56.94%), Query Frame = 2
Query: 296 ESPPTPSRGEWMADSSSSSCVLCDMPFTLTNRRHHCRACFMLVCSKCSARTYKLGDSSKGRTTQQRVCEACF 511
+ PP + EW+ DS S+SC +C PFT NRRHHCR C L C++C + L G T + +VC CF
Sbjct: 94 QDPPVIKKPEWVPDSFSNSCEMCQTPFTFFNRRHHCRRCGHLFCAECCSLNVSLPQEF-GYTERVKVCSKCF 164
BLAST of mRNA_P-wetherbeei_contig11228.1.1 vs. uniprot
Match: A0A835ZPU8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPU8_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 2.010e-8 Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 2
Query: 317 RGEWMADSSSSSCVLCDMPFTLTNRRHHCRACFMLVCSKCSARTY 451
+ WM D S C+LCD FT TNRRHHCR+CF LVCS CS + +
Sbjct: 31 KATWMDDKDSEVCLLCDQAFTFTNRRHHCRSCFKLVCSSCSGQQF 75 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11228.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11228.1.1 >prot_P-wetherbeei_contig11228.1.1 ID=prot_P-wetherbeei_contig11228.1.1|Name=mRNA_P-wetherbeei_contig11228.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp MSQESPPTPSRGEWMADSSSSSCVLCDMPFTLTNRRHHCRACFMLVCSKCback to top mRNA from alignment at P-wetherbeei_contig11228:1365..2187+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11228.1.1 ID=mRNA_P-wetherbeei_contig11228.1.1|Name=mRNA_P-wetherbeei_contig11228.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=823bp|location=Sequence derived from alignment at P-wetherbeei_contig11228:1365..2187+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11228:1365..2187+ >mRNA_P-wetherbeei_contig11228.1.1 ID=mRNA_P-wetherbeei_contig11228.1.1|Name=mRNA_P-wetherbeei_contig11228.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig11228:1365..2187+ (Phaeothamnion wetherbeei SAG_119_79)back to top |