mRNA_P-wetherbeei_contig11215.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11215.1.1 vs. uniprot
Match: K8YYT0_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YYT0_NANGC) HSP 1 Score: 138 bits (347), Expect = 2.240e-36 Identity = 60/99 (60.61%), Postives = 73/99 (73.74%), Query Frame = 1
Query: 448 PPYDAVINYRRSRDKGALRCVMCGARPRRGVCEIPRQNKDVCKDCDRVTWRHASTGVIFKWCKGCKRFSDVTAFGDKPEAAKCHACRERGRMCYLVKKG 744
P Y+ +IN+ R++DK +RCVMCG P C IPRQNKDVCKDCD+ TW+HA T V FKWCKGCK+F +++F K +AAKC CRERGR YL KKG
Sbjct: 130 PMYEELINFPRAKDKDDMRCVMCGLPPGEH-CVIPRQNKDVCKDCDKATWQHADTQVYFKWCKGCKKFLKLSSFSQKLDAAKCDKCRERGRQSYLAKKG 227
BLAST of mRNA_P-wetherbeei_contig11215.1.1 vs. uniprot
Match: W7T4H3_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4H3_9STRA) HSP 1 Score: 139 bits (350), Expect = 2.410e-36 Identity = 62/108 (57.41%), Postives = 75/108 (69.44%), Query Frame = 1
Query: 448 PPYDAVINYRRSRDKGALRCVMCGARPRRGVCEIPRQNKDVCKDCDRVTWRHASTGVIFKWCKGCKRFSDVTAFGDKPEAAKCHACRERGRMCYLVKKGAFAAAGHHH 771
P Y+ +IN+ R++DK +RCVMCG P C IPRQNKDVCKDCD+ TW+HA T V FKWCKGCK+F +++F K +AAKC CRERGR YL KKG HH
Sbjct: 139 PMYEELINFPRAKDKDDMRCVMCGLPPGEH-CVIPRQNKDVCKDCDKATWQHADTQVYFKWCKGCKKFLKLSSFSQKLDAAKCDKCRERGRQSYLAKKGKDXXXXSHH 245
BLAST of mRNA_P-wetherbeei_contig11215.1.1 vs. uniprot
Match: A0A7S2WHQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHQ6_9STRA) HSP 1 Score: 142 bits (358), Expect = 5.390e-36 Identity = 61/99 (61.62%), Postives = 75/99 (75.76%), Query Frame = 1
Query: 448 PPYDAVINYRRSRDKGALRCVMCGARPRRGVCEIPRQNKDVCKDCDRVTWRHASTGVIFKWCKGCKRFSDVTAFGDKPEAAKCHACRERGRMCYLVKKG 744
PPYD +INY R++DK +RCVMCG P C IPRQNKDVCK+CD+ TW+H +T V FKWCKGCK+F + +F +K +AAKC CRERGR YL+KKG
Sbjct: 40 PPYDDLINYPRAKDKDEIRCVMCGLPPG-SCCVIPRQNKDVCKECDKSTWQHIATNVYFKWCKGCKKFLRLGSFSEKLDAAKCDRCRERGRQSYLLKKG 137
BLAST of mRNA_P-wetherbeei_contig11215.1.1 vs. uniprot
Match: A0A7S2F7Q2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F7Q2_9STRA) HSP 1 Score: 137 bits (345), Expect = 4.150e-34 Identity = 56/100 (56.00%), Postives = 75/100 (75.00%), Query Frame = 1
Query: 442 DPPPYDAVINYRRSRDKGALRCVMCGARPRRGVCEIPRQNKDVCKDCDRVTWRHASTGVIFKWCKGCKRFSDVTAFGDKPEAAKCHACRERGRMCYLVKK 741
D PPY+ +IN+ R++ K +RCVMCG+ P C IPRQNKDVCK+CD+ TW+H ++ + FKWCKGCK+F + +F +K +AAKC CRERGR YL+KK
Sbjct: 44 DAPPYEELINFPRAKGKDEIRCVMCGSTPGFPGCVIPRQNKDVCKECDKSTWQHMASSIFFKWCKGCKKFLRLGSFSEKLDAAKCDRCRERGRQSYLLKK 143
BLAST of mRNA_P-wetherbeei_contig11215.1.1 vs. uniprot
Match: A0A7R9UH40_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UH40_9STRA) HSP 1 Score: 132 bits (333), Expect = 6.480e-32 Identity = 59/100 (59.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query: 442 DPPPYDAVINYRRSRDKGALRCVMCGARPRRGVCEIPRQNKDVCKDCDRVTWRHASTGVIFKWCKGCKRFSDVTAFGDKPEAAKCHACRERGRMCYLVKK 741
D P Y+ +IN+ R+RDK +CVMCG RP V IPRQNKDVCKDCDR W+H T V FKWCKGCKRF ++ FGD+ AAKC CR R R Y+ KK
Sbjct: 37 DAPAYEDLINFPRARDKEQAQCVMCGRRPGASVV-IPRQNKDVCKDCDRQIWQHGKTLVFFKWCKGCKRFLNLVRFGDRLSAAKCEKCRHRARQSYMAKK 135
BLAST of mRNA_P-wetherbeei_contig11215.1.1 vs. uniprot
Match: A0A7S4E5E9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5E9_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.060e-31 Identity = 58/96 (60.42%), Postives = 65/96 (67.71%), Query Frame = 1
Query: 454 YDAVINYRRSRDKGALRCVMCGARPRRGVCEIPRQNKDVCKDCDRVTWRHASTGVIFKWCKGCKRFSDVTAFGDKPEAAKCHACRERGRMCYLVKK 741
YDAV NY R+ A CVMCG +GV IPRQNKDVC+DCD+ WRH S+G FKWCKGCK F V F K +AAKC CRERGR YL+KK
Sbjct: 76 YDAVTNYARAAKGTAQSCVMCGCGASKGVV-IPRQNKDVCRDCDKAMWRHRSSGCFFKWCKGCKNFLHVGTFSQKLDAAKCDRCRERGRTSYLLKK 170
BLAST of mRNA_P-wetherbeei_contig11215.1.1 vs. uniprot
Match: A0A8J2SF93_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SF93_9STRA) HSP 1 Score: 113 bits (282), Expect = 3.250e-25 Identity = 56/150 (37.33%), Postives = 75/150 (50.00%), Query Frame = 1
Query: 412 PELANTKHPLDPPPYDAVINYRRSRDKGALRCVMCGARPRR---------------------------------------GVCEIPRQNKDVCKDCDRVTWRHASTGVIFKWCKGCKRFSDVTAFGDKPEAAKCHACRERGRMCYLVKKG 744
P A P P Y+ ++N+ R++ + L CVMCG RPR G IPRQNKDVC++CD+ WRH ++ + FKWCKGCKRF ++ AF +K A+KC CRERGR Y+ +KG
Sbjct: 296 PPGARLLDPGPAPAYELLVNFPRAKSRTQLHCVMCGRRPRDANPREPLPERAPPQPRNPRLDGMGDDRDDVQPGAERTLGGSVIIPRQNKDVCRECDKALWRHCASDIHFKWCKGCKRFRNLVAFAEKLAASKCDRCRERGRQGYMRRKG 445
BLAST of mRNA_P-wetherbeei_contig11215.1.1 vs. uniprot
Match: A0A7S3ZSZ6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSZ6_9STRA) HSP 1 Score: 105 bits (262), Expect = 4.360e-25 Identity = 53/105 (50.48%), Postives = 65/105 (61.90%), Query Frame = 1
Query: 463 VINYRRSRDKGALR-CVMCGAR---PRRGV--------CEIPRQNKDVCKDCDRVTWRHASTGVIFKWCKGCKRFSDVTAFGDKPEAAKCHACRERGRMCYLVKK 741
VIN+ R++ +GA CVMCG R P +G IP QNKDVCK CD VTW+H TG FKWCKGCKRF ++ AF K +A+KC R RGR Y+ +K
Sbjct: 14 VINFNRTKGRGAPHSCVMCGKRGRPPTKGKDPPADDDRVVIPTQNKDVCKVCDTVTWKHNPTGAYFKWCKGCKRFHEIHAFAGKLKASKCDDSRARGRAGYMRRK 118
BLAST of mRNA_P-wetherbeei_contig11215.1.1 vs. uniprot
Match: A0A6S8TG69_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8TG69_9STRA) HSP 1 Score: 112 bits (280), Expect = 6.060e-25 Identity = 56/110 (50.91%), Postives = 69/110 (62.73%), Query Frame = 1
Query: 448 PPYDAVINYRRSRDKGALR-CVMCGAR---PRRGV--------CEIPRQNKDVCKDCDRVTWRHASTGVIFKWCKGCKRFSDVTAFGDKPEAAKCHACRERGRMCYLVKK 741
P YD+VIN+ R++ +GA CVMCG R P +G IP QNKDVCK CD VTW+H TG FKWCKGCKRF ++ AF K +A+KC R RGR Y+ +K
Sbjct: 338 PSYDSVINFNRTKGRGAPHSCVMCGKRGRPPTKGKDPPADDDRVVIPTQNKDVCKVCDTVTWKHNPTGAYFKWCKGCKRFHEIHAFAGKLKASKCDDSRARGRAGYMRRK 447
BLAST of mRNA_P-wetherbeei_contig11215.1.1 vs. uniprot
Match: A0A7S3NIQ7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIQ7_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.790e-24 Identity = 53/111 (47.75%), Postives = 64/111 (57.66%), Query Frame = 1
Query: 454 YDAVINYRRSRDKGALRCVMCG--ARPRRGVCE-------------IPRQNKDVCKDCDRVTWRHASTGVIFKWCKGCKRFSDVTAFGDKPEAAKCHACRERGRMCYLVKK 741
Y++V NY R+ CVMCG A RG + IPRQNKDVC+DCD+V W H ++ FKWCKGCK F + F K +AAKC CRERGR YL+KK
Sbjct: 36 YESVTNYTRAAKGSTQICVMCGNLASHSRGGGDQCGDDDQPPGTTIIPRQNKDVCRDCDKVIWNHETSNAYFKWCKGCKNFLQIGNFSQKLDAAKCDKCRERGRTSYLLKK 146 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11215.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11215.1.1 >prot_P-wetherbeei_contig11215.1.1 ID=prot_P-wetherbeei_contig11215.1.1|Name=mRNA_P-wetherbeei_contig11215.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp SKTRGKKRRAKKRGCRTTSTTSLVDKNWLHPSCVVETPLAKSQRFWRDGAback to top mRNA from alignment at P-wetherbeei_contig11215:127..1242- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11215.1.1 ID=mRNA_P-wetherbeei_contig11215.1.1|Name=mRNA_P-wetherbeei_contig11215.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1116bp|location=Sequence derived from alignment at P-wetherbeei_contig11215:127..1242- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11215:127..1242- >mRNA_P-wetherbeei_contig11215.1.1 ID=mRNA_P-wetherbeei_contig11215.1.1|Name=mRNA_P-wetherbeei_contig11215.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig11215:127..1242- (Phaeothamnion wetherbeei SAG_119_79)back to top |