mRNA_P-wetherbeei_contig11206.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11206.3.1 vs. uniprot
Match: A0A1Y2R710_9BURK (Uncharacterized protein n=1 Tax=Hydrogenophaga sp. IBVHS1 TaxID=1985169 RepID=A0A1Y2R710_9BURK) HSP 1 Score: 241 bits (616), Expect = 1.470e-77 Identity = 117/138 (84.78%), Postives = 129/138 (93.48%), Query Frame = 1
Query: 1 GEVSSLADLFSEQLTVGFGSAGFYATQETSGRLKVLAVTGPKRVARYPHIPTLAEAGYPGANLPGWYGLFLPAGTPKAVVSKFSDEVRRIIALPDLQAKIQEVGFVSVSSSPEEFSRYIATEMDTWSKVIKQNDIKVD 414
GEVSSL DL + QLTVG+GSAGFYA QE SG++KVLAVTGPKRVARYPHIPTLAEAG+PGANLPGWYGLFLPAGTPK V++KFSDEVRRI+ALPD+QAKI+EVGFV V +S EEFSRYIATEMDTWS+VIKQNDIKVD
Sbjct: 195 GEVSSLPDLLNGQLTVGYGSAGFYAAQEASGKVKVLAVTGPKRVARYPHIPTLAEAGFPGANLPGWYGLFLPAGTPKPVLAKFSDEVRRIVALPDVQAKIEEVGFVPVGNSSEEFSRYIATEMDTWSRVIKQNDIKVD 332
BLAST of mRNA_P-wetherbeei_contig11206.3.1 vs. uniprot
Match: A0A6P2F276_9BURK (Argininosuccinate lyase n=1 Tax=Variovorax sp. PBL-H6 TaxID=434009 RepID=A0A6P2F276_9BURK) HSP 1 Score: 184 bits (468), Expect = 3.180e-55 Identity = 83/138 (60.14%), Postives = 115/138 (83.33%), Query Frame = 1
Query: 1 GEVSSLADLFSEQLTVGFGSAGFYATQETSGRLKVLAVTGPKRVARYPHIPTLAEAGYPGANLPGWYGLFLPAGTPKAVVSKFSDEVRRIIALPDLQAKIQEVGFVSVSSSPEEFSRYIATEMDTWSKVIKQNDIKVD 414
GE SS DL S QLT FGS GFYA Q ++G++K+LA+TG +R+AR+P++PT+AEAGYPGANLPGW GLFLPAGTP+ VVS+FS EVR+I+A+P+++AK+ ++GFV V +S +EF +YI +E+ WS +IK+N+IK+D
Sbjct: 194 GETSSFTDLASGQLTSAFGSTGFYAAQLSTGKVKLLAITGSQRMARFPNVPTMAEAGYPGANLPGWSGLFLPAGTPEPVVSRFSQEVRKILAMPEVRAKLDDMGFVPVGNSSQEFGQYIKSEVSAWSAIIKENNIKLD 331
BLAST of mRNA_P-wetherbeei_contig11206.3.1 vs. uniprot
Match: A0A6P2F0Q6_9BURK (Argininosuccinate lyase n=1 Tax=Variovorax sp. PBL-H6 TaxID=434009 RepID=A0A6P2F0Q6_9BURK) HSP 1 Score: 158 bits (399), Expect = 6.820e-45 Identity = 71/138 (51.45%), Postives = 100/138 (72.46%), Query Frame = 1
Query: 1 GEVSSLADLFSEQLTVGFGSAGFYATQETSGRLKVLAVTGPKRVARYPHIPTLAEAGYPGANLPGWYGLFLPAGTPKAVVSKFSDEVRRIIALPDLQAKIQEVGFVSVSSSPEEFSRYIATEMDTWSKVIKQNDIKVD 414
GE +S DL S QL++ FG+ GFY+ Q +G++++LAVT P R+ +YP++PTL+EAGYP NL GW+G+FLPA TPKA+V KFS +VRR IA+PDLQA+I E+G V +P +F + +E+ W+K I IK+D
Sbjct: 192 GESASFPDLASGQLSMSFGTVGFYSAQAAAGKIRILAVTSPHRLKKYPNVPTLSEAGYPDVNLAGWFGVFLPAATPKAIVDKFSADVRRAIAMPDLQARIYEMGLEPVGDTPADFELKLKSELSHWTKAISDTGIKLD 329
BLAST of mRNA_P-wetherbeei_contig11206.3.1 vs. uniprot
Match: A0A0S9MV43_9BURK (Uncharacterized protein n=4 Tax=unclassified Pseudorhodoferax TaxID=2638544 RepID=A0A0S9MV43_9BURK) HSP 1 Score: 157 bits (397), Expect = 9.890e-45 Identity = 72/138 (52.17%), Postives = 100/138 (72.46%), Query Frame = 1
Query: 1 GEVSSLADLFSEQLTVGFGSAGFYATQETSGRLKVLAVTGPKRVARYPHIPTLAEAGYPGANLPGWYGLFLPAGTPKAVVSKFSDEVRRIIALPDLQAKIQEVGFVSVSSSPEEFSRYIATEMDTWSKVIKQNDIKVD 414
GE ++ DL S Q+ + +GS GFYA Q +GR+++LAV P+R+ +P +PTLAEAGYP NLPGW G+FLPAGTP+A+V KF EVRR+ LPD+QA+I E+GF V SS EFS I+ ++ W V++ N+IK++
Sbjct: 179 GEAAAFPDLASGQIELAYGSVGFYARQAGTGRVRILAVANPRRLKAFPDVPTLAEAGYPDVNLPGWGGVFLPAGTPQAIVDKFEREVRRVTLLPDVQARILELGFEPVGSSAAEFSTAISEDLQKWGAVVRANNIKLE 316
BLAST of mRNA_P-wetherbeei_contig11206.3.1 vs. uniprot
Match: UPI001B2F2EC8 (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Variovorax sp. TaxID=1871043 RepID=UPI001B2F2EC8) HSP 1 Score: 149 bits (377), Expect = 1.260e-41 Identity = 63/138 (45.65%), Postives = 100/138 (72.46%), Query Frame = 1
Query: 1 GEVSSLADLFSEQLTVGFGSAGFYATQETSGRLKVLAVTGPKRVARYPHIPTLAEAGYPGANLPGWYGLFLPAGTPKAVVSKFSDEVRRIIALPDLQAKIQEVGFVSVSSSPEEFSRYIATEMDTWSKVIKQNDIKVD 414
GE +S D+ S ++ + +GS GFYA Q TSG++K++AV P R+ +P +PT AE GYP NLPGW +FLPAGTP +V K+ E+RRI ALPD+QAKI ++G+ V+++ EF++++ ++ W+++ ++NDI++D
Sbjct: 190 GEAASFTDVASGEIALAYGSVGFYANQITSGKVKLIAVASPNRLKTFPDLPTFAELGYPDINLPGWGAMFLPAGTPAPIVDKYVQEIRRITALPDVQAKIYQLGYEPVANTNTEFAQFLQEDLKRWTRIARENDIRLD 327
BLAST of mRNA_P-wetherbeei_contig11206.3.1 vs. uniprot
Match: A0A0Q7LXL7_9BURK (Uncharacterized protein n=2 Tax=Variovorax sp. Root473 TaxID=1736541 RepID=A0A0Q7LXL7_9BURK) HSP 1 Score: 147 bits (372), Expect = 6.720e-41 Identity = 63/138 (45.65%), Postives = 99/138 (71.74%), Query Frame = 1
Query: 1 GEVSSLADLFSEQLTVGFGSAGFYATQETSGRLKVLAVTGPKRVARYPHIPTLAEAGYPGANLPGWYGLFLPAGTPKAVVSKFSDEVRRIIALPDLQAKIQEVGFVSVSSSPEEFSRYIATEMDTWSKVIKQNDIKVD 414
GE +S DL + + +GS GFYA Q + G++K+++V +R+ ++P +PT AEAG+P NLPGW +FLPA TP VV KFS+E+R+I+A+PD+QAKI E+GF V +S +EF+ + ++ W K++++N+IK+D
Sbjct: 188 GEAASFIDLVGGDIDLAYGSVGFYARQLSGGKVKLISVASARRLKQFPDVPTFAEAGFPEINLPGWGAVFLPANTPAPVVEKFSNEIRKIVAMPDVQAKIYEMGFEPVGNSSKEFAGVVEADLKAWGKIVRENNIKLD 325
BLAST of mRNA_P-wetherbeei_contig11206.3.1 vs. uniprot
Match: A0A244E5P6_9BURK (Uncharacterized protein n=4 Tax=unclassified Variovorax TaxID=663243 RepID=A0A244E5P6_9BURK) HSP 1 Score: 144 bits (364), Expect = 1.100e-39 Identity = 61/138 (44.20%), Postives = 97/138 (70.29%), Query Frame = 1
Query: 1 GEVSSLADLFSEQLTVGFGSAGFYATQETSGRLKVLAVTGPKRVARYPHIPTLAEAGYPGANLPGWYGLFLPAGTPKAVVSKFSDEVRRIIALPDLQAKIQEVGFVSVSSSPEEFSRYIATEMDTWSKVIKQNDIKVD 414
GE +S D+ S + + +GS GFYA Q +G++K++AV P R+ +P +PT AE GYP NLPGW +FLPAGTP +V K+ E+RRI A+PD+ AKI ++G+ V+++ EF++++ ++ W+K+ K+NDI++D
Sbjct: 190 GEAASFTDVASGDIALAYGSVGFYANQIATGKVKLIAVAAPHRLKTFPDLPTFAELGYPDINLPGWGAMFLPAGTPAPIVDKYVQEIRRITAMPDVLAKIHQLGYEPVANTNTEFTQFLQEDLKRWAKIAKENDIRLD 327
BLAST of mRNA_P-wetherbeei_contig11206.3.1 vs. uniprot
Match: A0A6P2FD14_9BURK (Argininosuccinate lyase n=4 Tax=unclassified Variovorax TaxID=663243 RepID=A0A6P2FD14_9BURK) HSP 1 Score: 144 bits (362), Expect = 2.230e-39 Identity = 59/138 (42.75%), Postives = 98/138 (71.01%), Query Frame = 1
Query: 1 GEVSSLADLFSEQLTVGFGSAGFYATQETSGRLKVLAVTGPKRVARYPHIPTLAEAGYPGANLPGWYGLFLPAGTPKAVVSKFSDEVRRIIALPDLQAKIQEVGFVSVSSSPEEFSRYIATEMDTWSKVIKQNDIKVD 414
GE +S D+ S + + +GS GFYA Q +G++K++AV P R+ +P +PT AE GYP NLPGW +FLPAGTP +V K+ E+RRI+A+PD+QA+I +G+ V+++ EF++++ ++ W+++ ++NDI++D
Sbjct: 191 GEAASFVDVASGDIALAYGSVGFYANQLATGKVKLIAVASPHRLKTFPDLPTFAELGYPDINLPGWGAMFLPAGTPAPIVEKYVQEIRRIVAMPDVQARIYALGYEPVANTNTEFAQFLQEDLKRWTRIARENDIRLD 328
BLAST of mRNA_P-wetherbeei_contig11206.3.1 vs. uniprot
Match: A0A0K8P697_IDESA (Putative exported protein n=1 Tax=Ideonella sakaiensis (strain NBRC 110686 / TISTR 2288 / 201-F6) TaxID=1547922 RepID=A0A0K8P697_IDESA) HSP 1 Score: 142 bits (359), Expect = 6.670e-39 Identity = 61/138 (44.20%), Postives = 100/138 (72.46%), Query Frame = 1
Query: 1 GEVSSLADLFSEQLTVGFGSAGFYATQETSGRLKVLAVTGPKRVARYPHIPTLAEAGYPGANLPGWYGLFLPAGTPKAVVSKFSDEVRRIIALPDLQAKIQEVGFVSVSSSPEEFSRYIATEMDTWSKVIKQNDIKVD 414
GE ++ DL S Q+ + +GS GFY++Q +G++K++AV PKR+ +P++PT AE GYP NL GW G+ LPA TP A+V K++ E+RRI+ALP++QA+I ++GF ++ EEF++ IA ++ W +++ N+IK++
Sbjct: 194 GEAAAFPDLVSGQIGLAYGSTGFYSSQVGTGKVKLIAVASPKRLKAFPNVPTFAEGGYPDVNLAGWGGMLLPAATPPAIVDKYTAELRRIVALPEVQARILQLGFEPAGTTREEFAQAIAGDIQRWGAIVRANNIKLE 331
BLAST of mRNA_P-wetherbeei_contig11206.3.1 vs. uniprot
Match: Q1LBX3_CUPMC (Extra-cytoplasmic solute receptor protein n=2 Tax=Cupriavidus metallidurans TaxID=119219 RepID=Q1LBX3_CUPMC) HSP 1 Score: 141 bits (356), Expect = 1.780e-38 Identity = 60/138 (43.48%), Postives = 97/138 (70.29%), Query Frame = 1
Query: 1 GEVSSLADLFSEQLTVGFGSAGFYATQETSGRLKVLAVTGPKRVARYPHIPTLAEAGYPGANLPGWYGLFLPAGTPKAVVSKFSDEVRRIIALPDLQAKIQEVGFVSVSSSPEEFSRYIATEMDTWSKVIKQNDIKVD 414
GE + DL + + +GS GFYA Q + G+++++AV P R+ +P++PT AEAGYP N+PGW G+FLPA TP A+V K++ E+RRI+ALP++Q KI E+GF ++ +FS I++++ W K+++ N+IK++
Sbjct: 192 GESPAFTDLVGGNIELAYGSVGFYAHQLSGGKVRLIAVASPNRLKTFPNVPTFAEAGYPEINIPGWGGVFLPAKTPPAIVEKYTQEIRRIVALPEVQKKILEMGFEPTGTTSAQFSDLISSDIKRWGKIVRDNNIKLE 329 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11206.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11206.3.1 >prot_P-wetherbeei_contig11206.3.1 ID=prot_P-wetherbeei_contig11206.3.1|Name=mRNA_P-wetherbeei_contig11206.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=139bp GEVSSLADLFSEQLTVGFGSAGFYATQETSGRLKVLAVTGPKRVARYPHIback to top mRNA from alignment at P-wetherbeei_contig11206:1774..2190- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11206.3.1 ID=mRNA_P-wetherbeei_contig11206.3.1|Name=mRNA_P-wetherbeei_contig11206.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig11206:1774..2190- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11206:1774..2190- >mRNA_P-wetherbeei_contig11206.3.1 ID=mRNA_P-wetherbeei_contig11206.3.1|Name=mRNA_P-wetherbeei_contig11206.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig11206:1774..2190- (Phaeothamnion wetherbeei SAG_119_79)back to top |