mRNA_P-wetherbeei_contig11206.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11206.1.1 vs. uniprot
Match: A0A1Y2R777_9BURK (Uncharacterized protein n=1 Tax=Hydrogenophaga sp. IBVHS1 TaxID=1985169 RepID=A0A1Y2R777_9BURK) HSP 1 Score: 256 bits (654), Expect = 6.860e-82 Identity = 135/181 (74.59%), Postives = 150/181 (82.87%), Query Frame = 1
Query: 1 MNFELNEDQVQLRDSVTRLLTDVYSFEQRRAIAATPAGTSLQVWRQLCELGVSGLRISEEDGGFGGTASDLVPVLQAFGKALLTEPFLTSAVLSATAISQATDEATRRALLPRLASGEQVAAWACDESAGRHAPCWVETTARQVNNQWQLSGAKDCVLNAPQAHAFIVSARVSGEPADPQG 543
MNFEL+EDQVQLRDSVTRLL D YSFEQRRAIAAT GTS VWRQLC LGVSGLRI+EE GGFGG+A+DL V+QAFG+ALLTEPFL SAVL ATA+S + D AT ALLP++ASGE+ AWA DE+AGRHAPCWVET A + WQL+G K CVLNAPQA+AFIVSARVSG PAD G
Sbjct: 1 MNFELHEDQVQLRDSVTRLLADNYSFEQRRAIAATAEGTSPAVWRQLCGLGVSGLRIAEEHGGFGGSAADLAVVMQAFGQALLTEPFLASAVLGATALSLSGD-ATSHALLPQVASGERTVAWASDEAAGRHAPCWVETRATRTGGAWQLTGTKACVLNAPQANAFIVSARVSGAPADAPG 180
BLAST of mRNA_P-wetherbeei_contig11206.1.1 vs. uniprot
Match: A0A6P2F214_9BURK (Acyl-CoA dehydrogenase fadE12 n=1 Tax=Variovorax sp. PBL-H6 TaxID=434009 RepID=A0A6P2F214_9BURK) HSP 1 Score: 214 bits (545), Expect = 1.590e-65 Identity = 114/181 (62.98%), Postives = 136/181 (75.14%), Query Frame = 1
Query: 1 MNFELNEDQVQLRDSVTRLLTDVYSFEQRRAIAATPAGTSLQVWRQLCELGVSGLRISEEDGGFGGTASDLVPVLQAFGKALLTEPFLTSAVLSATAISQATDEATRRALLPRLASGEQVAAWACDESAGRHAPCWVETTARQVNNQWQLSGAKDCVLNAPQAHAFIVSARVSGEPADPQG 543
MNFE++E+Q QLRDSV RLL Y FEQRR IAA+ +G S +VWRQLC LGV+GLRI E+ GGFGG+A+DL PVLQ FGKALL EPFL SAVL ATA+ +A D R+ LLPR+ASGE V AWA DE A RHAP WVE+TARQ QW++ G K VL+A A +V+AR SG PA+ +G
Sbjct: 1 MNFEISEEQGQLRDSVARLLAASYGFEQRRRIAASESGWSPEVWRQLCALGVTGLRIPEDCGGFGGSAADLRPVLQEFGKALLVEPFLASAVLGATALGRAGDAEIRKRLLPRVASGECVLAWAHDEPAARHAPLWVESTARQDAGQWRIDGHKFNVLHAAAAQQLVVTARTSGAPAEREG 181
BLAST of mRNA_P-wetherbeei_contig11206.1.1 vs. uniprot
Match: UPI00131CDF01 (acyl-CoA dehydrogenase family protein n=1 Tax=Xenophilus sp. L33 TaxID=1747220 RepID=UPI00131CDF01) HSP 1 Score: 209 bits (531), Expect = 1.920e-63 Identity = 111/181 (61.33%), Postives = 133/181 (73.48%), Query Frame = 1
Query: 1 MNFELNEDQVQLRDSVTRLLTDVYSFEQRRAIAATPAGTSLQVWRQLCELGVSGLRISEEDGGFGGTASDLVPVLQAFGKALLTEPFLTSAVLSATAISQATDEATRRALLPRLASGEQVAAWACDESAGRHAPCWVETTARQVNNQWQLSGAKDCVLNAPQAHAFIVSARVSGEPADPQG 543
MNFEL+E+QVQL+DSV RLL D Y+FEQRRAIAA+ G S VWRQLCELG++GL I E GGFGG A+DL PVLQ FG+ALL EPF+ SAVL ATA+ QA D +TR LLP++ASGE + AWA DE A RHAP WVET A + +W+L G K V +A A A +V AR +G PA+ G
Sbjct: 1 MNFELSEEQVQLQDSVGRLLADSYTFEQRRAIAASAEGWSPAVWRQLCELGLAGLCIDEAAGGFGGRAADLGPVLQTFGRALLLEPFMASAVLGATALQQAADASTRERLLPKVASGETILAWADDEPAARHAPLWVETKAVRDGERWRLHGLKSNVQHAAAADALVVVARSAGAPAERDG 181
BLAST of mRNA_P-wetherbeei_contig11206.1.1 vs. uniprot
Match: A0A1H7EED2_9BURK (Pimeloyl-CoA dehydrogenase n=2 Tax=unclassified Variovorax TaxID=663243 RepID=A0A1H7EED2_9BURK) HSP 1 Score: 206 bits (525), Expect = 1.490e-62 Identity = 107/181 (59.12%), Postives = 131/181 (72.38%), Query Frame = 1
Query: 1 MNFELNEDQVQLRDSVTRLLTDVYSFEQRRAIAATPAGTSLQVWRQLCELGVSGLRISEEDGGFGGTASDLVPVLQAFGKALLTEPFLTSAVLSATAISQATDEATRRALLPRLASGEQVAAWACDESAGRHAPCWVETTARQVNNQWQLSGAKDCVLNAPQAHAFIVSARVSGEPADPQG 543
MNFELN++Q+ LRDS+ RLL DVY FE+RRAIAA+ G SL W+QL LG++ L + + GGFGG A+DL+PV+Q GKAL+ EPFL+S VL ATA+ A DE + LLP +ASGE AWA DE A RHAP W+ET ARQ + QW L GAK VL+AP AH F+VSAR +GEP D G
Sbjct: 1 MNFELNDEQLALRDSLARLLGDVYGFEKRRAIAASATGWSLPAWQQLAALGLTALPLPQAHGGFGGGAADLMPVMQELGKALVLEPFLSSIVLGATAVRLAADEVLQVQLLPDVASGELRLAWAHDEEAARHAPLWIETRARQQDGQWLLDGAKCNVLHAPSAHRFVVSARTAGEPGDAHG 181
BLAST of mRNA_P-wetherbeei_contig11206.1.1 vs. uniprot
Match: A0A679JW17_VARPD (Caffeyl-CoA reductase-Etf complex subunit CarC n=1 Tax=Variovorax paradoxus TaxID=34073 RepID=A0A679JW17_VARPD) HSP 1 Score: 198 bits (503), Expect = 2.970e-59 Identity = 101/181 (55.80%), Postives = 131/181 (72.38%), Query Frame = 1
Query: 1 MNFELNEDQVQLRDSVTRLLTDVYSFEQRRAIAATPAGTSLQVWRQLCELGVSGLRISEEDGGFGGTASDLVPVLQAFGKALLTEPFLTSAVLSATAISQATDEATRRALLPRLASGEQVAAWACDESAGRHAPCWVETTARQVNNQWQLSGAKDCVLNAPQAHAFIVSARVSGEPADPQG 543
MNFELN++Q+ L+DS++RLL DVY FEQRRAIAA+ AG S VW++L ELG++ L + GGFGG A+DL+PV++ GKAL+ EP+L+S VL ATA+ A DE + LLP +ASGE AWA DE RHAP W+E ARQ + QW + GAK VL+AP AH F+VSAR+ +P D +G
Sbjct: 1 MNFELNDEQLALQDSLSRLLGDVYGFEQRRAIAASAAGWSTAVWQRLAELGLTALPLPASHGGFGGGAADLMPVMRELGKALVLEPYLSSIVLGATAVRLAADEVLQVQLLPGVASGEVRLAWAHDEQGARHAPLWIEAHARQEDGQWVIDGAKCNVLHAPSAHRFVVSARIDAKPGDARG 181
BLAST of mRNA_P-wetherbeei_contig11206.1.1 vs. uniprot
Match: A0A7V8G6R2_9BURK (Acyl-CoA dehydrogenase n=4 Tax=unclassified Variovorax TaxID=663243 RepID=A0A7V8G6R2_9BURK) HSP 1 Score: 197 bits (501), Expect = 5.930e-59 Identity = 107/181 (59.12%), Postives = 129/181 (71.27%), Query Frame = 1
Query: 1 MNFELNEDQVQLRDSVTRLLTDVYSFEQRRAIAATPAGTSLQVWRQLCELGVSGLRISEEDGGFGGTASDLVPVLQAFGKALLTEPFLTSAVLSATAISQATDEATRRALLPRLASGEQVAAWACDESAGRHAPCWVETTARQVNNQWQLSGAKDCVLNAPQAHAFIVSARVSGEPADPQG 543
MNFELNE+Q L+ S++RLL DVY FEQRRAIAATPAG S VWRQL ELG++ L + + GGFGG A DL+PV+Q G+AL EPFL S VL ATA+ A D+A + LLP +ASGE AWA DE+AG AP W+ET AR +W+L GAK VL+A AH +VSARV+G P D QG
Sbjct: 1 MNFELNEEQQALQASLSRLLGDVYGFEQRRAIAATPAGWSEAVWRQLAELGLTALPLPQAHGGFGGGAVDLLPVMQELGRALSLEPFLASIVLGATALRLAGDDALQARLLPGVASGEVRLAWAHDEAAGHQAPLWIETVARHDGERWRLDGAKCNVLHAMAAHHVVVSARVTGAPDDKQG 181
BLAST of mRNA_P-wetherbeei_contig11206.1.1 vs. uniprot
Match: A0A2P1VJS4_9BURK (Acyl-CoA dehydrogenase n=2 Tax=Variovorax TaxID=34072 RepID=A0A2P1VJS4_9BURK) HSP 1 Score: 194 bits (493), Expect = 9.380e-58 Identity = 106/181 (58.56%), Postives = 126/181 (69.61%), Query Frame = 1
Query: 1 MNFELNEDQVQLRDSVTRLLTDVYSFEQRRAIAATPAGTSLQVWRQLCELGVSGLRISEEDGGFGGTASDLVPVLQAFGKALLTEPFLTSAVLSATAISQATDEATRRALLPRLASGEQVAAWACDESAGRHAPCWVETTARQVNNQWQLSGAKDCVLNAPQAHAFIVSARVSGEPADPQG 543
MNFELNE+Q L+ S+ RLL DVY FEQRRAIAATPAG S VWRQL ELG++ L + + GGFGG A DL+PV+Q G+AL EPFL S VL TA+ A ++A + LLP +ASGE AWA DE+ G A WVETTARQ QW+L GAK VL+A AH F+VSAR +G P D G
Sbjct: 1 MNFELNEEQQALQGSLARLLGDVYGFEQRRAIAATPAGWSQPVWRQLGELGLTALPLPQAHGGFGGGAVDLLPVMQELGRALSLEPFLASIVLGGTALRLAGNDAVQAQLLPDVASGEIRLAWAHDEAGGHPAALWVETTARQDGGQWRLDGAKCNVLHATAAHRFVVSARTAGAPGDANG 181
BLAST of mRNA_P-wetherbeei_contig11206.1.1 vs. uniprot
Match: A0A2G6X4U2_9BURK (Pimeloyl-CoA dehydrogenase n=2 Tax=Variovorax TaxID=34072 RepID=A0A2G6X4U2_9BURK) HSP 1 Score: 189 bits (481), Expect = 5.450e-56 Identity = 102/181 (56.35%), Postives = 123/181 (67.96%), Query Frame = 1
Query: 1 MNFELNEDQVQLRDSVTRLLTDVYSFEQRRAIAATPAGTSLQVWRQLCELGVSGLRISEEDGGFGGTASDLVPVLQAFGKALLTEPFLTSAVLSATAISQATDEATRRALLPRLASGEQVAAWACDESAGRHAPCWVETTARQVNNQWQLSGAKDCVLNAPQAHAFIVSARVSGEPADPQG 543
M F+LNEDQ L S++RLL D Y FEQRRAIA +PAG S W QL LGV+ L I E GG GG A D +PV+QAFG+ALL EP+L S+VL ATA+ A +A + LLP LA G AWA DE+ GRHAP W+ET AR+ ++W L GAK VL+A A F+VSARVSG+P D G
Sbjct: 1 MQFDLNEDQQALAQSLSRLLDDHYGFEQRRAIAHSPAGWSEAAWGQLAALGVTALGIPEAFGGLGGGAGDRLPVMQAFGRALLLEPYLASSVLGATAVLSAGSDAQKDRLLPALADGSLRMAWAHDEAQGRHAPLWIETRARRDGDRWHLDGAKSLVLHAGAASRFVVSARVSGQPGDEDG 181
BLAST of mRNA_P-wetherbeei_contig11206.1.1 vs. uniprot
Match: A0A6P2FA66_9BURK (Acyl-CoA dehydrogenase n=4 Tax=unclassified Variovorax TaxID=663243 RepID=A0A6P2FA66_9BURK) HSP 1 Score: 189 bits (481), Expect = 6.030e-56 Identity = 102/181 (56.35%), Postives = 122/181 (67.40%), Query Frame = 1
Query: 1 MNFELNEDQVQLRDSVTRLLTDVYSFEQRRAIAATPAGTSLQVWRQLCELGVSGLRISEEDGGFGGTASDLVPVLQAFGKALLTEPFLTSAVLSATAISQATDEATRRALLPRLASGEQVAAWACDESAGRHAPCWVETTARQVNNQWQLSGAKDCVLNAPQAHAFIVSARVSGEPADPQG 543
MNFELNEDQ L +S+ R+L D +FEQRRA+ A+ A + W L ELGV+ L + E GGFGG A DL+PV+QA G++L EPFL S VL+ TA+ DEAT+ LLPR+ASGE V AWA DE AGRHAP WVET A + N +W L G K VL A +VSARVSG PADP G
Sbjct: 1 MNFELNEDQAALAESLQRMLADRCAFEQRRALVASGAAHDDKTWGALAELGVTALPLPEAHGGFGGGARDLLPVMQALGRSLSMEPFLASTVLAGTALRLGADEATQSRLLPRMASGELVLAWAHDEPAGRHAPLWVETRAERRNGRWVLDGIKSNVLAGGLAQHIVVSARVSGAPADPDG 181
BLAST of mRNA_P-wetherbeei_contig11206.1.1 vs. uniprot
Match: UPI00097BCE0D (acyl-CoA dehydrogenase family protein n=1 Tax=Variovorax sp. KK3 TaxID=1855728 RepID=UPI00097BCE0D) HSP 1 Score: 188 bits (478), Expect = 1.740e-55 Identity = 101/181 (55.80%), Postives = 124/181 (68.51%), Query Frame = 1
Query: 1 MNFELNEDQVQLRDSVTRLLTDVYSFEQRRAIAATPAGTSLQVWRQLCELGVSGLRISEEDGGFGGTASDLVPVLQAFGKALLTEPFLTSAVLSATAISQATDEATRRALLPRLASGEQVAAWACDESAGRHAPCWVETTARQVNNQWQLSGAKDCVLNAPQAHAFIVSARVSGEPADPQG 543
MNFEL+EDQ L +S+ RLL D YSFE+RRA+ A+ A W L ELG++ L + E GGFGG A DL+PV+QAFG+AL EP+L S VL+ TAI DEAT+ LLP LASGE++ AWA DE GRHAP WVET A + + +W L G K VL A A F+VSAR++GEP D QG
Sbjct: 1 MNFELDEDQSALAESLKRLLADRYSFEKRRALVASGATHDEAAWSTLAELGLTALPVPEAHGGFGGGARDLMPVMQAFGRALSMEPYLASTVLAGTAIRLGADEATQARLLPGLASGERLLAWAHDEPGGRHAPLWVETRAERRDGRWLLHGIKSNVLAAGAARQFVVSARIAGEPDDEQG 181 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11206.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11206.1.1 >prot_P-wetherbeei_contig11206.1.1 ID=prot_P-wetherbeei_contig11206.1.1|Name=mRNA_P-wetherbeei_contig11206.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=181bp MNFELNEDQVQLRDSVTRLLTDVYSFEQRRAIAATPAGTSLQVWRQLCELback to top mRNA from alignment at P-wetherbeei_contig11206:1..543- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11206.1.1 ID=mRNA_P-wetherbeei_contig11206.1.1|Name=mRNA_P-wetherbeei_contig11206.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig11206:1..543- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11206:1..543- >mRNA_P-wetherbeei_contig11206.1.1 ID=mRNA_P-wetherbeei_contig11206.1.1|Name=mRNA_P-wetherbeei_contig11206.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig11206:1..543- (Phaeothamnion wetherbeei SAG_119_79)back to top |