mRNA_P-wetherbeei_contig11181.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11181.2.1
Unique NamemRNA_P-wetherbeei_contig11181.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11181.2.1 vs. uniprot
Match: A0A6I2WZ61_9ACTN (J domain-containing protein n=6 Tax=root TaxID=1 RepID=A0A6I2WZ61_9ACTN)

HSP 1 Score: 197 bits (500), Expect = 2.990e-61
Identity = 109/173 (63.01%), Postives = 127/173 (73.41%), Query Frame = 1
Query:   16 DPFAVLGLTWDATLDDVRAARRALAREVHPDRGGDGVRMQEVNAAFDAAVGHLTGRRPLVDP-----------TPAPTSXXXXXXXXXXXSP-----RFRIERDSPSFTIDALPAEAFEALLVVTSWIGEVLVDDPPYLLEVHLTDPVPCWCRLDLVPDAGGSTVSLTVASPD 486
            DPF VLGL++ A LDD+RAARR LAR+ HPDRGG    M+ +NAAFD+A+ H TGRR LVDP           + AP  XXXXXXX           RFR+  D PSFTIDALPAEA+EALL+V SWIGEVLVD+PPYLL+VHL+DP  CWCRL+LVPDAG STVS+TVA+ D
Sbjct:    7 DPFVVLGLSFGAPLDDIRAARRRLARDAHPDRGGSEEAMKALNAAFDSAIAHATGRRVLVDPGTRGAATGSRRSTAPAXXXXXXXXAAQREQPRSAGRFRVSHDHPSFTIDALPAEAYEALLIVCSWIGEVLVDEPPYLLDVHLSDPSECWCRLELVPDAGSSTVSITVAAVD 179          
BLAST of mRNA_P-wetherbeei_contig11181.2.1 vs. uniprot
Match: A0A6I3WS57_9ACTN (J domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I3WS57_9ACTN)

HSP 1 Score: 186 bits (472), Expect = 3.760e-57
Identity = 111/171 (64.91%), Postives = 126/171 (73.68%), Query Frame = 1
Query:    7 TVTDPFAVLGLTWDATLDDVRAARRALAREVHPDRGGDGVRMQEVNAAFDAAVGHLTGRRPLVD--------PTPAPTSXXXXXXXXXXXSPRF-RIERDSPSFTIDALPAEAFEALLVVTSWIGEVLVDDPPYLLEVHLTDPVPCWCRLDLVPDAGGSTVSLTVA-SPDG 489
            T  DPF +LGL   A+L +VR ARR LA + HPDRGG+   M+ +NAAFDAAVGHLTGRRPL +        P PA   XXXXXXXX     R  R++ D PSF + ALPAEAFEALLVVTSW+GEVLVDDPPY+LEVHL +P  CWCRLDLVPDAG STVS+TVA S DG
Sbjct:    2 TAPDPFELLGLDRAASLAEVRVARRRLAFDRHPDRGGNADDMRVLNAAFDAAVGHLTGRRPLPEAPVGATSTPDPAXXXXXXXXXXXTPGQHRSGRVQHDVPSFVVAALPAEAFEALLVVTSWVGEVLVDDPPYVLEVHLREPAECWCRLDLVPDAGASTVSITVAPSGDG 172          
BLAST of mRNA_P-wetherbeei_contig11181.2.1 vs. uniprot
Match: A0A3C2B579_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B579_9ACTN)

HSP 1 Score: 166 bits (421), Expect = 1.290e-49
Identity = 88/158 (55.70%), Postives = 102/158 (64.56%), Query Frame = 1
Query:   16 DPFAVLGLTWDATLDDVRAARRALAREVHPDRGGDGVRMQEVNAAFDAAVGHLTGRRPLVDPTPAPTSXXXXXXXXXXXSPRFRIERDSPSFTIDALPAEAFEALLVVTSWIGEVLVDDPPYLLEVHLTDPVPCWCRLDLVPDAGGSTVSLTVASPDG 489
            DPFA+LG+  DA    + AARR  A EVHPDRGG    MQE     DAA+ HL    P   P                  P +R+ RD  SFTIDALP +AFEAL+VVTSW+GE+LVDDPPY+LE  L +P PCWCRLDLVPDAGGSTVS+TVA  +G
Sbjct:    4 DPFALLGVDADADEATLAAARRRRAWEVHPDRGGSVAAMQEGLFRSDAALRHLQAPAPEQAPVADAPPPRAARPTRRRQQPAWRVVRDESSFTIDALPVDAFEALVVVTSWLGELLVDDPPYVLEAFLMEPEPCWCRLDLVPDAGGSTVSITVAGVEG 161          
BLAST of mRNA_P-wetherbeei_contig11181.2.1 vs. uniprot
Match: A0A6N2DPP0_9ACTN (J domain-containing protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DPP0_9ACTN)

HSP 1 Score: 166 bits (420), Expect = 4.830e-49
Identity = 94/169 (55.62%), Postives = 107/169 (63.31%), Query Frame = 1
Query:   16 DPFAVLGLTWDATLDDVRAARRALAREVHPDRGGDGVRMQEVNAAFDAA---VGHLTGRRPLVDP-----------TPAPTSXXXXXXXXXXXSPRFRIERDSPSFTIDALPAEAFEALLVVTSWIGEVLVDDPPYLLEVHLTDPVPCWCRLDLVPDAGGSTVSLTVAS 480
            DPF +LGL  DAT  DV+ ARR LA+E HPD GGD   M+ +NAA  AA   +G    RR +V P           T + T                R+  D+ SFTI+ALPAEAFEALLVV +WIGE LVDDPPYLLEVHL DPV CWCRLDLVPDAG  TVSLTVA+
Sbjct:    4 DPFELLGLDGDATEADVQRARRRLAKEHHPDVGGDEAEMRRLNAAVTAAMVEIGRRADRRRVVPPAAPEWGRNDSTTGSTTMSTPGRQPVSGERDGRRVVHDNASFTIEALPAEAFEALLVVATWIGETLVDDPPYLLEVHLRDPVECWCRLDLVPDAGACTVSLTVAT 172          
BLAST of mRNA_P-wetherbeei_contig11181.2.1 vs. uniprot
Match: A0A6I3EXU7_9ACTN (J domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I3EXU7_9ACTN)

HSP 1 Score: 165 bits (417), Expect = 7.070e-49
Identity = 98/161 (60.87%), Postives = 117/161 (72.67%), Query Frame = 1
Query:   16 DPFAVLGLTWDATLDDVRAARRALAREVHPDRGGDGVRMQEVNAAFDAAVGHLTGRRPLVDPTPAPTSXXXXXXXXXXXS------PRFRIERDSPSFTIDALPAEAFEALLVVTSWIGEVLVDDPPYLLEVHLTDPVPCWCRLDLVPDAGGSTVSLTVAS 480
            DPF+VLG+   +    + AARR LARE+HPD GGD   MQ VN A+D A+      R L +P PA  +XXXXXXXXXX +      P   ++ D+PSFTI  LPAEAFEALL+VTSWIGEVLVDDPPY+LEV L +P PCWCRLDLVPDAG +T+SLTVA+
Sbjct:    6 DPFSVLGVPAMSDAATLGAARRRLARELHPDVGGDAAAMQAVNVAYDEAL------RLLAEPPPAEPAXXXXXXXXXXQASTHRRGPARNVQHDNPSFTIAVLPAEAFEALLIVTSWIGEVLVDDPPYVLEVFLHEPAPCWCRLDLVPDAGATTISLTVAA 160          
BLAST of mRNA_P-wetherbeei_contig11181.2.1 vs. uniprot
Match: A0A7W0QYV0_9ACTN (DnaJ domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0QYV0_9ACTN)

HSP 1 Score: 164 bits (414), Expect = 3.070e-48
Identity = 100/164 (60.98%), Postives = 120/164 (73.17%), Query Frame = 1
Query:   16 DPFAVLGLTWDATLDDVRAARRALAREVHPDR-GGDGVRMQEVNAAFDAAVGHLTGRRPLVDPTPAPTSXXXXXXXXXXXSP-----RFRIERDSPSFTIDALPAEAFEALLVVTSWIGEVLVDDPPYLLEVHLTDPVPCWCRLDLVPDAGGSTVSLTVASPDG 489
            DPFAVLG+   AT D++RAARR LA  +HPDR GGDG RM+E+N A DAA+  +  R  +  P      XXXXXXXXXXX       R R+  D  SFTI+ALPAEAFEA+LVV++W+G+VLVDDPPYLLE+ L DP  CWCRLDLVPDAG ST+SLT+A  +G
Sbjct:   18 DPFAVLGVDRHATADELRAARRRLALAMHPDRHGGDGSRMRELNLALDAALATVAARAVVATPPXXXXXXXXXXXXXXXXXXPPRQGRGRVVHDVASFTIEALPAEAFEAVLVVSTWLGDVLVDDPPYLLEMMLGDPFRCWCRLDLVPDAGASTISLTLAGLEG 181          
BLAST of mRNA_P-wetherbeei_contig11181.2.1 vs. uniprot
Match: A0A4R7I0C1_9ACTN (J domain-containing protein n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7I0C1_9ACTN)

HSP 1 Score: 159 bits (403), Expect = 1.050e-46
Identity = 91/161 (56.52%), Postives = 106/161 (65.84%), Query Frame = 1
Query:   16 DPFAVLGLTWDATLDDVRAARRALAREVHPDRGGDGVRMQEVNAAFDAAV---GHLTGRRPLVDPTPAPTSXXXXXXXXXXXSPRFRIERDSPSFTIDALPAEAFEALLVVTSWIGEVLVDDPPYLLEVHLTDPVPCWCRLDLVPDAGGSTVSLTVASPDG 489
            DPFA LGL   AT DDVR AR  LA+  HPD GG    MQ VNAA DAA+   G +T   P ++P  A ++            P  R+ RD PSFTI+ALPAEA+EALL+V + +G VL D+PPY LE HLTD    WCRLD+VPD GGSTVSLTVASPDG
Sbjct:   11 DPFAELGLGPGATADDVRRARNRLAKRAHPDVGGSADEMQRVNAAADAALQRLGAVTESAP-IEPETAGSAPRPPRR------PGGRVGRDHPSFTIEALPAEAYEALLIVANVLGVVLDDEPPYRLEAHLTDEPTAWCRLDVVPDGGGSTVSLTVASPDG 164          
BLAST of mRNA_P-wetherbeei_contig11181.2.1 vs. uniprot
Match: A0A7Y1ZUT5_9ACTN (J domain-containing protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZUT5_9ACTN)

HSP 1 Score: 155 bits (393), Expect = 2.630e-45
Identity = 84/157 (53.50%), Postives = 100/157 (63.69%), Query Frame = 1
Query:   16 DPFAVLGLTWDATLDDVRAARRALAREVHPDRGGDGVRMQEVNAAFDAAVGHLT---GRRPLVDPTPAPTSXXXXXXXXXXXSPRFRIERDSPSFTIDALPAEAFEALLVVTSWIGEVLVDDPPYLLEVHLTDPVPCWCRLDLVPDAGGSTVSLTVA 477
            DPF  LGL   A  D VRAARR LA+E HPD GGD  +M+ +NAA   A+  +    G  P   PTPA                   +  D PSFT++ALPAE FEALLVV +WIGEVL DDPPY L+ HL +PVPCWCRL+LVPDAG S+VS+T+A
Sbjct:    4 DPFRDLGLERSADADAVRAARRRLAKEHHPDTGGDEGQMRRINAAAADALQAIEAPPGSPPPRSPTPADGPLTPDDPASGFDGQPTGLTSDVPSFTVEALPAETFEALLVVATWIGEVLDDDPPYRLDTHLFEPVPCWCRLELVPDAGASSVSITIA 160          
BLAST of mRNA_P-wetherbeei_contig11181.2.1 vs. uniprot
Match: UPI000E34346F (J domain-containing protein n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E34346F)

HSP 1 Score: 152 bits (383), Expect = 1.230e-43
Identity = 84/154 (54.55%), Postives = 103/154 (66.88%), Query Frame = 1
Query:   28 VLGLTWDATLDDVRAARRALAREVHPDRGGDGVRMQEVNAAFDAAVGHLTGRRPLVDPTPAPTSXXXXXXXXXXXSPRFR---IERDSPSFTIDALPAEAFEALLVVTSWIGEVLVDDPPYLLEVHLTDPVPCWCRLDLVPDAGGSTVSLTVAS 480
            +LG+T DA ++DVRAARR LA+++HPD GGD   M+ VN A +  +  L   RP       P S              FR   ++ D  SFTI+ALP  AFEALLVVTSWIGEV+VD+PPY LEV LTDP+ CWCRLD+VPDAG STV+LT+AS
Sbjct:   10 LLGVTADAGVEDVRAARRRLAKDLHPDAGGDESAMRAVNEAVELVLDDLA--RPAAGRA-GPGSATAGAAASPRPGSGFRPGRVDHDVASFTIEALPVVAFEALLVVTSWIGEVVVDEPPYQLEVVLTDPLRCWCRLDIVPDAGASTVALTIAS 160          
BLAST of mRNA_P-wetherbeei_contig11181.2.1 vs. uniprot
Match: A0A2E0RP58_9ACTN (J domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RP58_9ACTN)

HSP 1 Score: 149 bits (377), Expect = 1.250e-42
Identity = 89/164 (54.27%), Postives = 104/164 (63.41%), Query Frame = 1
Query:   16 DPFAVLGLTWDATLDDVRAARRALAREVHPDRGGDGVRMQEVNAAFDAAVGHL--TGRRPLVDPTPAPTSXXXXXXXXXXXSPRFRIE----RDSPSFTIDALPAEAFEALLVVTSWIGEVLVDDPPYLLEVHLTDPVPCWCRLDLVPDAGGSTVSLTVASPDG 489
            DPFA LGL   AT DDVR AR+ LA+  HPD GG    MQ VNAA DAA+  L  T   P ++P             XXXX           RD PSFT++ALPAEAFEALL+V + +G VL DDPPY L+VH+ DP   WCRL++VPD GGSTVSLTVAS +G
Sbjct:   11 DPFAELGLGPGATADDVRRARQRLAKRAHPDVGGSAAEMQRVNAAADAALRRLGATVDAPPIEPDRRDAHGGREHRGXXXXXXXXXXXXXXGRDHPSFTVEALPAEAFEALLIVANVLGVVLDDDPPYRLDVHVADPPAAWCRLEVVPDGGGSTVSLTVASTEG 174          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11181.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I2WZ61_9ACTN2.990e-6163.01J domain-containing protein n=6 Tax=root TaxID=1 R... [more]
A0A6I3WS57_9ACTN3.760e-5764.91J domain-containing protein n=2 Tax=root TaxID=1 R... [more]
A0A3C2B579_9ACTN1.290e-4955.70Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A6N2DPP0_9ACTN4.830e-4955.62J domain-containing protein n=1 Tax=Ilumatobacter ... [more]
A0A6I3EXU7_9ACTN7.070e-4960.87J domain-containing protein n=2 Tax=root TaxID=1 R... [more]
A0A7W0QYV0_9ACTN3.070e-4860.98DnaJ domain-containing protein n=1 Tax=Acidimicrob... [more]
A0A4R7I0C1_9ACTN1.050e-4656.52J domain-containing protein n=1 Tax=Ilumatobacter ... [more]
A0A7Y1ZUT5_9ACTN2.630e-4553.50J domain-containing protein n=1 Tax=Ilumatobacter ... [more]
UPI000E34346F1.230e-4354.55J domain-containing protein n=1 Tax=Desertimonas f... [more]
A0A2E0RP58_9ACTN1.250e-4254.27J domain-containing protein n=1 Tax=Acidimicrobiac... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11181contigP-wetherbeei_contig11181:1702..2190 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1313172.YM304_20110
PFAMsDnaJ,DnaJ_C,TPR_2,WD40
Model size489
Max annot lvl2|Bacteria
KEGG koko:K05516
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.35e-36
EggNOG OGsCOG2214@1|root,COG2214@2|Bacteria
DescriptionHeat shock protein DnaJ domain protein
Cds size489
COG categoryO
BRITEko00000,ko03036,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185900.836395-CDS-P-wetherbeei_contig11181:1701..21901683185900.836395-CDS-P-wetherbeei_contig11181:1701..2190Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11181 1702..2190 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11181.2.1prot_P-wetherbeei_contig11181.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11181 1702..2190 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11181.2.1

>prot_P-wetherbeei_contig11181.2.1 ID=prot_P-wetherbeei_contig11181.2.1|Name=mRNA_P-wetherbeei_contig11181.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=163bp
MATVTDPFAVLGLTWDATLDDVRAARRALAREVHPDRGGDGVRMQEVNAA
FDAAVGHLTGRRPLVDPTPAPTSPAPAPPRHRPRSPRFRIERDSPSFTID
ALPAEAFEALLVVTSWIGEVLVDDPPYLLEVHLTDPVPCWCRLDLVPDAG
GSTVSLTVASPDG
back to top

mRNA from alignment at P-wetherbeei_contig11181:1702..2190+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11181.2.1 ID=mRNA_P-wetherbeei_contig11181.2.1|Name=mRNA_P-wetherbeei_contig11181.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=489bp|location=Sequence derived from alignment at P-wetherbeei_contig11181:1702..2190+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGACGGTGACCGATCCCTTCGCCGTCCTGGGTCTGACCTGGGATGC AACGTTGGATGACGTGCGTGCCGCCCGACGAGCTCTGGCGCGCGAGGTTC ATCCGGATCGCGGCGGCGATGGGGTGCGCATGCAGGAGGTCAACGCGGCG TTCGACGCGGCCGTCGGACACCTCACCGGTCGGCGCCCACTGGTCGACCC CACCCCGGCACCGACGAGCCCGGCGCCAGCGCCGCCCAGACACCGGCCGC GATCGCCTCGGTTCCGCATCGAGCGCGACAGCCCGTCGTTCACCATCGAC GCGCTGCCGGCCGAGGCCTTCGAAGCGCTGCTCGTGGTGACCTCCTGGAT CGGCGAGGTGCTCGTTGACGATCCGCCCTATCTGTTGGAGGTCCACCTCA CCGATCCGGTGCCGTGCTGGTGTCGCCTCGACCTCGTGCCCGACGCAGGC GGCAGCACGGTCAGCCTCACCGTCGCCAGCCCCGACGGG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig11181:1702..2190+

>mRNA_P-wetherbeei_contig11181.2.1 ID=mRNA_P-wetherbeei_contig11181.2.1|Name=mRNA_P-wetherbeei_contig11181.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=489bp|location=Sequence derived from alignment at P-wetherbeei_contig11181:1702..2190+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGACGGTGACCGATCCCTTCGCCGTCCTGGGTCTGACCTGGGATGC
AACGTTGGATGACGTGCGTGCCGCCCGACGAGCTCTGGCGCGCGAGGTTC
ATCCGGATCGCGGCGGCGATGGGGTGCGCATGCAGGAGGTCAACGCGGCG
TTCGACGCGGCCGTCGGACACCTCACCGGTCGGCGCCCACTGGTCGACCC
CACCCCGGCACCGACGAGCCCGGCGCCAGCGCCGCCCAGACACCGGCCGC
GATCGCCTCGGTTCCGCATCGAGCGCGACAGCCCGTCGTTCACCATCGAC
GCGCTGCCGGCCGAGGCCTTCGAAGCGCTGCTCGTGGTGACCTCCTGGAT
CGGCGAGGTGCTCGTTGACGATCCGCCCTATCTGTTGGAGGTCCACCTCA
CCGATCCGGTGCCGTGCTGGTGTCGCCTCGACCTCGTGCCCGACGCAGGC
GGCAGCACGGTCAGCCTCACCGTCGCCAGCCCCGACGGG
back to top