mRNA_P-wetherbeei_contig11093.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11093.2.1
Unique NamemRNA_P-wetherbeei_contig11093.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11093.2.1 vs. uniprot
Match: A0A7C4XYR9_9HYPH (DNA polymerase III subunit delta n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XYR9_9HYPH)

HSP 1 Score: 362 bits (928), Expect = 3.030e-121
Identity = 187/337 (55.49%), Postives = 251/337 (74.48%), Query Frame = 1
Query:    1 MVAIKPAQAATFLKSLEPRIVAILLYGDDAGLVSERAKAAANALAARSKPPGEVLRIEDADLDSDPDRLHTELLTVSMFGGARVVRTTASRKINVNLLKSLLEPGAMTGALVVEAGAMRAEDALRKLFDGSGIALAVPCYPDESRDLDTIVKEAFAEAGLTISPDVRQLLVGRLGADRALSRAEIDKLILYAHGQTSVGIEDVEAIVGDASEMAIDAILLAVSAGNGRQAVMEFDRAVGSGESPQGIIVMTLRHFQRLHRLRGQLDQGRSFDEAARSMRPPLHFKTRGVIEAHSRRWDATRLDRAIAAISRTAKQARLSSALEVTLTERLLLELAAM 1011
            MVAIK  QA  FLKS++  I A+L+YG+DAGLVSERA+AAA  LA  S PPGE++RIE+AD + DP+RL  EL TV+MFGG R+VRTTA RKIN  +L  LL PGA+ GALVVEAG +R  DALR  F+ +  A+A+PCY DE RDLD +V+E  A  G+ I+ + RQ LV RLGADRALSR+EI+KL LYA G+  + ++D++A+VGDA+E+AIDA+L A ++G+  +A+ E DR V SGESPQ II+   RHFQRL+R+R  LD GR F++A R +RPPLHFK +G++E  +R W   R  +A+A I+  A+ ARL++ LE ++ ERL+L++  +
Sbjct:    1 MVAIKAHQAQAFLKSMDGAIAAVLVYGNDAGLVSERAQAAAERLAGSSDPPGEIVRIEEADFEQDPERLAVELKTVAMFGGRRIVRTTAGRKINAQVLTPLLAPGAVAGALVVEAGNLRQGDALRAAFERADHAVAIPCYGDEGRDLDRLVRERLAAHGVEITAEARQALVARLGADRALSRSEIEKLALYAGGKGRIEVDDIDAVVGDAAELAIDAVLFAAASGDAARALSEIDRTVASGESPQAIILALQRHFQRLNRIRAALDAGRGFEDAIRPLRPPLHFKHKGIVETQARAWTLARSSQALAMIATAARAARLTATLETSIAERLVLDVTRL 337          
BLAST of mRNA_P-wetherbeei_contig11093.2.1 vs. uniprot
Match: UPI0006868E10 (DNA polymerase III subunit delta n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI0006868E10)

HSP 1 Score: 350 bits (897), Expect = 1.790e-116
Identity = 186/338 (55.03%), Postives = 241/338 (71.30%), Query Frame = 1
Query:    1 MVAIKPAQAATFLKSLEPRIVAILLYGDDAGLVSERAKAAANALAARSKPPGEVLRIEDADLDSDPDRLHTELLTVSMFGGARVVRTTASRKINVNLLKSLLEPGAMTGALVVEAGAMRAEDALRKLFDGSGIALAVPCYPDESRDLDTIVKEAFAEAGLTISPDVRQLLVGRLGADRALSRAEIDKLILYAHGQTSVGIEDVEAIVGDASEMAIDAILLAVSAGNGRQAVMEFDRAVGSGESPQGIIVMTLRHFQRLHRLRGQLDQGRSFDEAARSMRPPLHFKTRGVIEAHSRRWDATRLDRAIAAISRTAKQARLSSALEVTLTERLLLELAAMV 1014
            MVA+K  QA  FL S +P+I A+L +G DAGLVSERA+  A A A R  PPGE+LR++DADLDSDPDRL  EL TV MFGG +++RTTASR++N   LK L+E GA+ G L+VEAG ++ ED+LR LF+ +  A A+ CY D ++DLD +++E   EAG+TIS D RQ LV RLGADRALSR EI+KL+LY  G   + ++DVEA+VGD SE+A++ I  A ++G   +A++E  RAV SGESPQ II  T RHFQ+LHR+R  LD+G S ++A R MRPPLHFK +    A  R W   RL  A++ IS  AK ARL+ +LE   +ERL+L LA MV
Sbjct:    1 MVAVKAHQAQAFLASPDPKIRAVLFFGSDAGLVSERAQVLAKAAARRFDPPGELLRLDDADLDSDPDRLVVELGTVPMFGGPKIIRTTASRRVNAAALKPLVEGGALEGVLIVEAGNLKPEDSLRALFEKAPSAAAIACYADAAQDLDALIREMVREAGITISSDARQALVERLGADRALSRGEIEKLLLYVDGGAEISVDDVEAVVGDVSELALERITFAAASGQVARALVECGRAVSSGESPQSIIAATQRHFQKLHRVRSALDRGTSMEDALRQMRPPLHFKQKDAFAAQCRLWTGPRLSDALSRISAAAKSARLAGSLEEAFSERLVLGLAMMV 338          
BLAST of mRNA_P-wetherbeei_contig11093.2.1 vs. uniprot
Match: A0A2W4TK56_9PROT (DNA polymerase III subunit delta n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4TK56_9PROT)

HSP 1 Score: 349 bits (896), Expect = 2.460e-116
Identity = 182/335 (54.33%), Postives = 248/335 (74.03%), Query Frame = 1
Query:    1 MVAIKPAQAATFLKSLEPRIVAILLYGDDAGLVSERAKAAANALAARSKPPGEVLRIEDADLDSDPDRLHTELLTVSMFGGARVVRTTASRKINVNLLKSLLEPGAMTGALVVEAGAMRAEDALRKLFDGSGIALAVPCYPDESRDLDTIVKEAFAEAGLTISPDVRQLLVGRLGADRALSRAEIDKLILYAHGQTSVGIEDVEAIVGDASEMAIDAILLAVSAGNGRQAVMEFDRAVGSGESPQGIIVMTLRHFQRLHRLRGQLDQGRSFDEAARSMRPPLHFKTRGVIEAHSRRWDATRLDRAIAAISRTAKQARLSSALEVTLTERLLLELA 1005
            M AIK  QA  FLK+L+ R  AILLYG DAG+++ERA+ AA  LA  S PPGE+LRIEDADL+ +PDRL  E  T+ MFGG +V+ T ASR++N  +L+ LL+ GA+ GALVVEAG +R +D+LR LF+ S  A AV CY DE+R LD+I+ E   +AG+TI+ + R+ L+ RLGADRAL+R E++KL+LY   +  + I+DV+AIVGDASE+AI+ ++LA ++G+ R+AV EFDR V SGESPQ +I    RH QRLHRLR  L++G+S D A R +RPP+HFKTR  +EA  R W   +L+ + + I+  AK+ARL+SA+E ++ ERLLL++A
Sbjct:    1 MTAIKAQQAEQFLKTLDLRYRAILLYGTDAGVIAERARTAAKKLAESSDPPGEILRIEDADLELEPDRLLVESQTIPMFGGPKVIHTRASRRVNAQVLQPLLQNGALAGALVVEAGNLRPDDSLRVLFEKSPNAAAVACYADETRTLDSIISETLEQAGVTITREAREALIARLGADRALTRGELEKLVLYTRSKRQITIDDVDAIVGDASELAIETVVLAAASGDARRAVQEFDRVVASGESPQAVISAVQRHMQRLHRLRASLERGQSMDAALRQLRPPIHFKTRPHLEAQCRIWTIEKLNTSFSHIADAAKEARLNSAVEASIAERLLLDIA 335          
BLAST of mRNA_P-wetherbeei_contig11093.2.1 vs. uniprot
Match: A0A2W4N5T4_9PROT (DNA polymerase III subunit delta n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4N5T4_9PROT)

HSP 1 Score: 345 bits (884), Expect = 1.510e-114
Identity = 181/342 (52.92%), Postives = 246/342 (71.93%), Query Frame = 1
Query:    1 MVAIKPAQAATFLKSLEPRIVAILLYGDDAGLVSERAKAAANALAARSKPPGEVLRIEDADLDSDPDRLHTELLTVSMFGGARVVRTTASRKINVNLLKSLLEPGAMTGALVVEAGAMRAEDALRKLFDGSGIALAVPCYPDESRDLDTIVKEAFAEAGLTISPDVRQLLVGRLGADRALSRAEIDKLILYAHGQTSVGIEDVEAIVGDASEMAIDAILLAVSAGNGRQAVMEFDRAVGSGESPQGIIVMTLRHFQRLHRLRGQLDQGRSFDEAARSMRPPLHFKTRGVIEAHSRRWDATRLDRAIAAISRTAKQARLSSALEVTLTERLLLELAAMVASQR 1026
            M A+K  QA  F+KSL+ R  A+L YG DAGLVSERA+ AA  LAA S PPG+VLRIEDADL+ +PDRL  E  TV MFGG +VV T ASR++   +LK LLE   +  +LVVEAG +R +D+LR+LF+ S  A AV C+ DE RDL+++V+E   EAGL+I P+  QLLV RLGADRAL+R E++KL+LY  G+T + ++D++A+VGDASE+A++ ++LA ++G   +A+ E DR + SGES Q +IV   RHF RLHRLR  +D G + + A + +RPP+HFK R V+EA  R W    L  A+  I+ TAK+ARL+++LE+ LTERLLL+LA   A ++
Sbjct:    1 MTAVKTHQADQFIKSLDSRYRAVLFYGPDAGLVSERARMAAQRLAAASNPPGDVLRIEDADLEMEPDRLLVEAQTVPMFGGPKVVHTRASRRVTAQVLKPLLEQETLAASLVVEAGNLRPDDSLRQLFEKSPKAAAVACFEDEGRDLESLVRETLREAGLSIDPEALQLLVSRLGADRALTRGELEKLVLYTRGKTRIEVDDIDAVVGDASELALEKVVLAAASGEADRALTELDRILASGESAQTVIVAVQRHFHRLHRLRTSIDAGATMETAIKQLRPPVHFKVRPVLEAQCRTWTTPMLQVALTQIADTAKRARLNASLEIPLTERLLLDLARNAADRK 342          
BLAST of mRNA_P-wetherbeei_contig11093.2.1 vs. uniprot
Match: UPI000931E4FF (DNA polymerase III subunit delta n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI000931E4FF)

HSP 1 Score: 343 bits (880), Expect = 6.100e-114
Identity = 186/337 (55.19%), Postives = 235/337 (69.73%), Query Frame = 1
Query:    1 MVAIKPAQAATFLKSLEPRIVAILLYGDDAGLVSERAKAAANALAARSKPPGEVLRIEDADLDSDPDRLHTELLTVSMFGGARVVRTTASRKINVNLLKSLLEPGAMTGALVVEAGAMRAEDALRKLFDGSGIALAVPCYPDESRDLDTIVKEAFAEAGLTISPDVRQLLVGRLGADRALSRAEIDKLILYAHGQTSVGIEDVEAIVGDASEMAIDAILLAVSAGNGRQAVMEFDRAVGSGESPQGIIVMTLRHFQRLHRLRGQLDQGRSFDEAARSMRPPLHFKTRGVIEAHSRRWDATRLDRAIAAISRTAKQARLSSALEVTLTERLLLELAAM 1011
            MVA+K  QA  F+ S +P+I A+L +G DAGLV ERA+A A A AAR  PPGE++R++DADLDSDPDRL  EL TV MFGG ++VRTTASRK+    LK LLE G + G L+VEAG +R ++A+R LF+ S +A AV CY D ++DL+ +++E   EAG  IS D  Q LV RLGADRALSR EI+KL+LY  G   +GIED+EA+VGD SE+AI+ I  A +AG  ++AV E  RAV +GESPQ II  T RHFQRLHR R  +D+G S D+A R MRPPLHFK +    A  R W   RL  A+  IS  A+ ARL+  L+  L ERLL+ LA +
Sbjct:    1 MVAVKAHQAQAFVSSPDPKIRAVLFFGSDAGLVGERAQALAKASAARFDPPGELIRLDDADLDSDPDRLVVELGTVPMFGGPKIVRTTASRKVTAAALKPLLEGGGLEGMLIVEAGNLRPDEAMRTLFEKSPLAAAVACYADAAQDLEGLIREMVREAGAKISADASQALVERLGADRALSRGEIEKLLLYVGGGREIGIEDIEAVVGDVSELAIERITFAAAAGQMQRAVAECGRAVSAGESPQAIIAATQRHFQRLHRARATVDRGSSLDDALRQMRPPLHFKQKDAFAAQCRMWTTPRLTEALKRISTAARSARLAGGLDEPLAERLLMGLAML 337          
BLAST of mRNA_P-wetherbeei_contig11093.2.1 vs. uniprot
Match: A0A0D6JD19_9HYPH (DNA polymerase III subunit delta n=1 Tax=Candidatus Filomicrobium marinum TaxID=1608628 RepID=A0A0D6JD19_9HYPH)

HSP 1 Score: 338 bits (866), Expect = 7.780e-112
Identity = 184/337 (54.60%), Postives = 233/337 (69.14%), Query Frame = 1
Query:    1 MVAIKPAQAATFLKSLEPRIVAILLYGDDAGLVSERAKAAANALAARSKPPGEVLRIEDADLDSDPDRLHTELLTVSMFGGARVVRTTASRKINVNLLKSLLEPGAMTGALVVEAGAMRAEDALRKLFDGSGIALAVPCYPDESRDLDTIVKEAFAEAGLTISPDVRQLLVGRLGADRALSRAEIDKLILYAHGQTSVGIEDVEAIVGDASEMAIDAILLAVSAGNGRQAVMEFDRAVGSGESPQGIIVMTLRHFQRLHRLRGQLDQGRSFDEAARSMRPPLHFKTRGVIEAHSRRWDATRLDRAIAAISRTAKQARLSSALEVTLTERLLLELAAM 1011
            MVAIK  Q+A+FLKS + +I A+L YG DAGLVSERA+ AA+A A R  PPGE+LR+++ DLD DP RL  ELLTV+MFGG ++VRT+  R+IN NLLK L+   A+   L+VEAG ++  DALRK+F+    A A+ C+PDE RDL  +V E    AGLTIS   R  LV RLGADRA+SR EI+KLILY  G+  V +EDVEAIVGDASE+ ID I+LA + G G +AV EF RA+ +GES Q II+   RHF RLHR+  Q+D GR   +  RS RPPLHFK +  + A +R W   RL +A+ AI   AK AR + ALE  + ERL+L L  +
Sbjct:    1 MVAIKSHQSASFLKSPDAKITALLFYGTDAGLVSERARQAADAWAKRENPPGEILRVDEMDLDGDPGRLADELLTVAMFGGRKIVRTSTGRRINANLLKPLVAETALPSVLIVEAGNLKPTDALRKMFEQPAHAAAIACFPDEERDLGAVVDEEMKAAGLTISAPARDSLVARLGADRAMSRGEIEKLILYCSGRGKVEVEDVEAIVGDASELTIDRIVLAAAGGQGDRAVNEFSRAIAAGESAQAIILALQRHFMRLHRVCTQIDAGRPVADVMRSFRPPLHFKQKDALTAQARMWTVQRLAQALGAIQAAAKTARHNGALEDIVAERLVLSLTRL 337          
BLAST of mRNA_P-wetherbeei_contig11093.2.1 vs. uniprot
Match: A0A2P5KU95_HYPSQ (DNA polymerase III subunit delta n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2P5KU95_HYPSQ)

HSP 1 Score: 337 bits (864), Expect = 1.780e-111
Identity = 180/340 (52.94%), Postives = 237/340 (69.71%), Query Frame = 1
Query:    1 MVAIKPAQAATFLKSLEPRIVAILLYGDDAGLVSERAKAAANALAARSKPPGEVLRIEDADLDSDPDRLHTELLTVSMFGGARVVRTTASRKINVNLLKSLLEPGAMTGALVVEAGAMRAEDALRKLFDGSGIALAVPCYPDESRDLDTIVKEAFAEAGLTISPDVRQLLVGRLGADRALSRAEIDKLILYAHGQTSVGIEDVEAIVGDASEMAIDAILLAVSAGNGRQAVMEFDRAVGSGESPQGIIVMTLRHFQRLHRLRGQLDQGRSFDEAARSMRPPLHFKTRGVIEAHSRRWDATRLDRAIAAISRTAKQARLSSALEVTLTERLLLELAAMVAS 1020
            MVAIK   AA+FLKS +PR+ A L +G DAGLVSERA   A  +AAR  P GE+L+ +DADL+SDPDRL  EL T+ MFGG +V+R T  R+IN NLLK L++ G +TG L+VE G ++ ++ALR LF+ S  A AV CY DE+ DLD +V++      L I+PD R+LL+ RLGADRALSR EI+KL L+A G  ++   DV+ +VGDA+E+A+D I  A + G+G +   E DR + SGESPQ II+   RHFQRLHR+R  LD+G+  DEA R+++PPLHFK +       R W   RL+RA++ I+  AK ARLS  LE  LTERLLL+LA + A+
Sbjct:    1 MVAIKAHLAASFLKSPDPRLSAFLFFGSDAGLVSERAYLLAKTIAARETPAGEMLKFDDADLESDPDRLAVELETMPMFGGRKVIRATTGRRINANLLKPLVQGGRLTGTLIVEGGNLKPDEALRALFEKSEHAAAVACYADEAADLDELVRQVLKANALEITPDARELLISRLGADRALSRNEIEKLALFAAGNGTIEASDVDTVVGDAAELALDRIPYAAANGDGARTATECDRWIASGESPQAIILAVQRHFQRLHRIRAALDKGKPLDEALRAIKPPLHFKQKAAFSLQCRAWPLERLNRALSGIATAAKAARLSPQLEAQLTERLLLDLARLSAA 340          
BLAST of mRNA_P-wetherbeei_contig11093.2.1 vs. uniprot
Match: A0A7C2RA73_9HYPH (DNA polymerase III subunit delta n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2RA73_9HYPH)

HSP 1 Score: 332 bits (851), Expect = 1.550e-109
Identity = 181/347 (52.16%), Postives = 236/347 (68.01%), Query Frame = 1
Query:    1 MVAIKPAQAATFLKSLEPRIVAILLYGDDAGLVSERAKAAANALAARSKPPGEVLRIEDADLDSDPDRLHTELLTVSMFGGARVVRTTASRKINVNLLKSLLEPGAMTGALVVEAGAMRAEDALRKLFDGSGIALAVPCYPDESRDLDTIVKEAFAEAGLTISPDVRQLLVGRLGADRALSRAEIDKLILYAHGQTSVGIEDVEAIVGDASEMAIDAILLAVSAGNGRQAVMEFDRAVGSGESPQGIIVMTLRHFQRLHRLRGQLDQGRSFDEAARSMRPPLHFKTRGVIEAHSRRWDATRLDRAIAAISRTAKQARLSSALEVTLTERLLLELAAM----VASQRR 1029
            MVA+K  QA  FL ++E    A+LLYG DAGLV+ERA   A  LA R  PPGEVLRI+D  L++DPDR+H EL T  MFGG ++VR  A R++   L++ L++ G + G L+VEAG++R +DA+R LF+ S  A AV C+PDE+RDLD I++E  A  G  I+ D R+LL+ RLGADR LSRAEIDKL LYAHG+ ++   DVEA VGDA+E A+D +++AV++G G  A++E DR+V +GE PQ +I    RHF RLHRLR  LD GRS D+A R +RP  HFK R  +EA +R W A  L  A+A I+     ARL + L   L ERLL++LA M    VA  RR
Sbjct:    1 MVAVKTHQAQAFLAAVERLPPAVLLYGTDAGLVAERASQLAKRLAERETPPGEVLRIDDDSLEADPDRIHVELRTPPMFGGRKIVRAPAGRRVTAALIEGLVKEGGLEGYLIVEAGSLRPDDAMRALFERSPAAAAVACFPDEARDLDAIIRETLAAGGTEITTDARRLLIARLGADRGLSRAEIDKLALYAHGKAAIDEADVEAAVGDAAEQALDRVVMAVASGRGAAALVECDRSVAAGEDPQAVIAAVQRHFLRLHRLRTALDAGRSMDDAIRGLRPQPHFKQRDALEAQARAWSAAGLAAALARIAXXXXXARLGADLGGLLAERLLIDLAEMAGGGVAPARR 347          
BLAST of mRNA_P-wetherbeei_contig11093.2.1 vs. uniprot
Match: A0A2D7FFE0_9HYPH (DNA polymerase III subunit delta n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7FFE0_9HYPH)

HSP 1 Score: 327 bits (837), Expect = 1.730e-107
Identity = 178/343 (51.90%), Postives = 235/343 (68.51%), Query Frame = 1
Query:    1 MVAIKPAQAATFLKSLEPRIVAILLYGDDAGLVSERAKAAANALAARSKPPGEVLRIEDADLDSDPDRLHTELLTVSMFGGARVVRTTASRKINVNLLKSLLEPGAMTGALVVEAGAMRAEDALRKLFDGSGIALAVPCYPDESRDLDTIVKEAFAEAGLTISPDVRQLLVGRLGADRALSRAEIDKLILYAHGQTSVGIEDVEAIVGDASEMAIDAILLAVSAGNGRQAVMEFDRAVGSGESPQGIIVMTLRHFQRLHRLRGQLDQGRSFDEAARSMRPPLHFKTRGVIEAHSRRWDATRLDRAIAAISRTAKQARLSSALEVTLTERLLLELAAMVASQRR 1029
            MVAIK A+A  F KS      A+L++G D GL SERA+  + +LA RS P G+V+RIED+D++ DPDRL  EL TVSMFGG +VVR T  R+IN NL+KSLL+ G     LV+EAG ++A DA+RKLF+ +  A AVPCY D+ R L  I+ E    AG TI P  R+LL+ RLGADRALSR EI+KL+L+   ++ V ++D+EA+VGDASE+AID I+ A + G+   ++ EF+R+V +G+SPQ II    RHF+R+HRLR  LD+G+SFD+AAR++RPP+ FK +       RRW   RL  A   IS  A  AR  S +E  L ERLLLEL+ M   QR+
Sbjct:    1 MVAIKAARAEAFAKSPPSDCTAVLVFGTDVGLCSERARDISKSLAGRSDPVGDVIRIEDSDIEQDPDRLAVELGTVSMFGGMQVVRVTLGRRINANLIKSLLDSGQPAAYLVIEAGNLKASDAVRKLFEATSWAAAVPCYADDERGLSGILDEMVRAAGKTIEPQARELLLSRLGADRALSRGEIEKLLLFVGDRSQVDLDDIEAVVGDASELAIDTIVSAAANGDAVTSIREFNRSVSAGDSPQVIIGALQRHFRRIHRLRAGLDEGKSFDDAARTLRPPVFFKQKASYADQCRRWSQERLQTASHRISEIAMLARTKSNMEAVLAERLLLELSTMAKQQRK 343          
BLAST of mRNA_P-wetherbeei_contig11093.2.1 vs. uniprot
Match: A0A2S5MXC0_HYPSQ (DNA polymerase III subunit delta n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A2S5MXC0_HYPSQ)

HSP 1 Score: 325 bits (832), Expect = 9.570e-107
Identity = 171/342 (50.00%), Postives = 232/342 (67.84%), Query Frame = 1
Query:    1 MVAIKPAQAATFLKSLEPRIVAILLYGDDAGLVSERAKAAANALAARSKPPGEVLRIEDADLDSDPDRLHTELLTVSMFGGARVVRTTASRKINVNLLKSLLEPGAMTGALVVEAGAMRAEDALRKLFDGSGIALAVPCYPDESRDLDTIVKEAFAEAGLTISPDVRQLLVGRLGADRALSRAEIDKLILYAHGQTSVGIEDVEAIVGDASEMAIDAILLAVSAGNGRQAVMEFDRAVGSGESPQGIIVMTLRHFQRLHRLRGQLDQGRSFDEAARSMRPPLHFKTRGVIEAHSRRWDATRLDRAIAAISRTAKQARLSSALEVTLTERLLLELAAMVASQR 1026
            MVA+K  QA  FLKS +PR  A L++G DAGLVSERA   A A+AA   PPGE++R+++ D+++DPD+L  ELLT+ MFGG ++VR   SR++  N+LK LL+  A+ G L+VEAG ++ +DALR  F+ +  A A+ CY D+ RDLD ++ E      LTI+P  RQ+LV RLGADR +SR EI+KL LYA GQ  +  +DVEA+VGDA+E+ ID I+ A + G+G  AV E  RA+ +GES QGII    RHF RLHRLR  +D G+S ++    MRPP+HFK +  + A  R W A  LD A+A I+  A+ AR++SALE  L ERL+L L+ +    R
Sbjct:    1 MVAVKAHQAQAFLKSPDPRYSAYLIFGGDAGLVSERAAGIAKAIAANDTPPGEIVRLDEIDIEADPDKLSVELLTIPMFGGRKIVRVETSRRVTTNMLKPLLDGHALAGVLIVEAGNLKKDDALRLAFEKAPNAAAIACYTDDGRDLDAVISEVLQPLRLTITPGARQMLVSRLGADRVMSRGEIEKLALYAQGQGQITEDDVEAVVGDAAELTIDRIVNASALGDGAAAVTELQRALHAGESAQGIIYAVQRHFTRLHRLRAAVDGGKSIEQTIGEMRPPIHFKQKDALAAQLRTWRAEALDAALAGIATAARAARMTSALEDLLAERLVLTLSRLARPAR 342          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11093.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4XYR9_9HYPH3.030e-12155.49DNA polymerase III subunit delta n=1 Tax=Hyphomicr... [more]
UPI0006868E101.790e-11655.03DNA polymerase III subunit delta n=1 Tax=Hyphomicr... [more]
A0A2W4TK56_9PROT2.460e-11654.33DNA polymerase III subunit delta n=1 Tax=Proteobac... [more]
A0A2W4N5T4_9PROT1.510e-11452.92DNA polymerase III subunit delta n=1 Tax=Proteobac... [more]
UPI000931E4FF6.100e-11455.19DNA polymerase III subunit delta n=1 Tax=Hyphomicr... [more]
A0A0D6JD19_9HYPH7.780e-11254.60DNA polymerase III subunit delta n=1 Tax=Candidatu... [more]
A0A2P5KU95_HYPSQ1.780e-11152.94DNA polymerase III subunit delta n=2 Tax=Hyphomicr... [more]
A0A7C2RA73_9HYPH1.550e-10952.16DNA polymerase III subunit delta n=1 Tax=Hyphomicr... [more]
A0A2D7FFE0_9HYPH1.730e-10751.90DNA polymerase III subunit delta n=2 Tax=Hyphomicr... [more]
A0A2S5MXC0_HYPSQ9.570e-10750.00DNA polymerase III subunit delta n=2 Tax=unclassif... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11093contigP-wetherbeei_contig11093:424..1455 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1267005.KB911257_gene1056
Preferred nameholA
PFAMsDNA_pol3_delta
Model size1032
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC02795
KEGG koko:K02340
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440
KEGG ModuleM00260
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.94e-117
EggNOG OGsCOG1466@1|root,COG1466@2|Bacteria,1R8PA@1224|Proteobacteria,2U1KQ@28211|Alphaproteobacteria,3N6YC@45401|Hyphomicrobiaceae
EC2.7.7.7
DescriptionDNA polymerase III, delta subunit
Cds size1032
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185897.1869469-CDS-P-wetherbeei_contig11093:423..14551683185897.1869469-CDS-P-wetherbeei_contig11093:423..1455Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11093 424..1455 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11093.2.1prot_P-wetherbeei_contig11093.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11093 424..1455 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11093.2.1

>prot_P-wetherbeei_contig11093.2.1 ID=prot_P-wetherbeei_contig11093.2.1|Name=mRNA_P-wetherbeei_contig11093.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=344bp
MVAIKPAQAATFLKSLEPRIVAILLYGDDAGLVSERAKAAANALAARSKP
PGEVLRIEDADLDSDPDRLHTELLTVSMFGGARVVRTTASRKINVNLLKS
LLEPGAMTGALVVEAGAMRAEDALRKLFDGSGIALAVPCYPDESRDLDTI
VKEAFAEAGLTISPDVRQLLVGRLGADRALSRAEIDKLILYAHGQTSVGI
EDVEAIVGDASEMAIDAILLAVSAGNGRQAVMEFDRAVGSGESPQGIIVM
TLRHFQRLHRLRGQLDQGRSFDEAARSMRPPLHFKTRGVIEAHSRRWDAT
RLDRAIAAISRTAKQARLSSALEVTLTERLLLELAAMVASQRR*
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mRNA from alignment at P-wetherbeei_contig11093:424..1455+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11093.2.1 ID=mRNA_P-wetherbeei_contig11093.2.1|Name=mRNA_P-wetherbeei_contig11093.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1032bp|location=Sequence derived from alignment at P-wetherbeei_contig11093:424..1455+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCGCCATCAAGCCAGCCCAGGCCGCCACGTTCCTGAAGTCGTTGGA GCCGCGGATCGTCGCCATCCTCCTCTATGGCGATGATGCCGGCCTCGTAT CGGAACGTGCGAAAGCGGCCGCCAATGCGCTTGCTGCGCGTTCGAAGCCG CCCGGCGAGGTTCTTCGCATCGAAGATGCTGATCTCGATAGCGACCCCGA CCGCCTGCACACGGAGTTGCTGACGGTGTCGATGTTCGGCGGGGCGCGCG TCGTTCGCACGACCGCAAGCCGAAAAATCAATGTCAACCTATTGAAGTCC TTGCTCGAACCTGGTGCGATGACCGGGGCGCTCGTGGTCGAGGCAGGCGC GATGCGCGCCGAGGACGCCTTGCGCAAACTGTTCGATGGCTCCGGGATAG CACTTGCCGTTCCCTGCTACCCGGACGAGTCGCGGGACCTGGATACCATC GTGAAGGAGGCCTTTGCCGAGGCTGGCTTGACGATTTCACCGGATGTGCG CCAGCTTCTGGTCGGCCGGCTCGGGGCCGATCGTGCGCTCTCGCGTGCCG AGATCGACAAGCTCATACTGTATGCGCACGGCCAGACCTCGGTCGGCATC GAGGATGTCGAGGCCATCGTCGGCGACGCATCGGAAATGGCGATCGATGC TATCCTGCTGGCGGTGAGCGCTGGCAATGGGCGCCAAGCGGTGATGGAGT TCGATCGCGCTGTCGGTTCGGGCGAGAGCCCGCAAGGCATCATCGTCATG ACCTTGCGACATTTCCAGCGACTTCATCGGCTGCGCGGGCAACTCGATCA GGGCCGCAGTTTCGATGAGGCCGCACGCTCGATGCGCCCGCCGCTGCATT TCAAGACCCGCGGCGTGATAGAAGCTCACAGCCGCCGTTGGGATGCCACC CGCTTGGATCGGGCGATTGCTGCCATCTCGCGTACGGCAAAACAGGCGCG CCTGTCGAGCGCGCTCGAGGTTACGCTGACCGAGCGCCTGCTGCTGGAGT TGGCCGCCATGGTTGCCTCGCAGCGCCGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11093:424..1455+

>mRNA_P-wetherbeei_contig11093.2.1 ID=mRNA_P-wetherbeei_contig11093.2.1|Name=mRNA_P-wetherbeei_contig11093.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1032bp|location=Sequence derived from alignment at P-wetherbeei_contig11093:424..1455+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCGCCATCAAGCCAGCCCAGGCCGCCACGTTCCTGAAGTCGTTGGA
GCCGCGGATCGTCGCCATCCTCCTCTATGGCGATGATGCCGGCCTCGTAT
CGGAACGTGCGAAAGCGGCCGCCAATGCGCTTGCTGCGCGTTCGAAGCCG
CCCGGCGAGGTTCTTCGCATCGAAGATGCTGATCTCGATAGCGACCCCGA
CCGCCTGCACACGGAGTTGCTGACGGTGTCGATGTTCGGCGGGGCGCGCG
TCGTTCGCACGACCGCAAGCCGAAAAATCAATGTCAACCTATTGAAGTCC
TTGCTCGAACCTGGTGCGATGACCGGGGCGCTCGTGGTCGAGGCAGGCGC
GATGCGCGCCGAGGACGCCTTGCGCAAACTGTTCGATGGCTCCGGGATAG
CACTTGCCGTTCCCTGCTACCCGGACGAGTCGCGGGACCTGGATACCATC
GTGAAGGAGGCCTTTGCCGAGGCTGGCTTGACGATTTCACCGGATGTGCG
CCAGCTTCTGGTCGGCCGGCTCGGGGCCGATCGTGCGCTCTCGCGTGCCG
AGATCGACAAGCTCATACTGTATGCGCACGGCCAGACCTCGGTCGGCATC
GAGGATGTCGAGGCCATCGTCGGCGACGCATCGGAAATGGCGATCGATGC
TATCCTGCTGGCGGTGAGCGCTGGCAATGGGCGCCAAGCGGTGATGGAGT
TCGATCGCGCTGTCGGTTCGGGCGAGAGCCCGCAAGGCATCATCGTCATG
ACCTTGCGACATTTCCAGCGACTTCATCGGCTGCGCGGGCAACTCGATCA
GGGCCGCAGTTTCGATGAGGCCGCACGCTCGATGCGCCCGCCGCTGCATT
TCAAGACCCGCGGCGTGATAGAAGCTCACAGCCGCCGTTGGGATGCCACC
CGCTTGGATCGGGCGATTGCTGCCATCTCGCGTACGGCAAAACAGGCGCG
CCTGTCGAGCGCGCTCGAGGTTACGCTGACCGAGCGCCTGCTGCTGGAGT
TGGCCGCCATGGTTGCCTCGCAGCGCCGCTGA
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