mRNA_P-wetherbeei_contig1108.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1108.1.1
Unique NamemRNA_P-wetherbeei_contig1108.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig1108.1.1 vs. uniprot
Match: A0A836CE08_9STRA (Tyrosine-protein phosphatase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE08_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.890e-29
Identity = 50/64 (78.12%), Postives = 58/64 (90.62%), Query Frame = 1 
Query:   19 MTTKVKDALFIGDAEASQDPDFLELNKITYIINCAGRQLPNLWEQHGLRYLTFPWDDALDCVLF 210
            M TK+ D +FIGDAE+SQDP+F+ELNKIT+IINCAGRQLPNLWE+HGLRYLTFPWDD   C+LF
Sbjct:    1 MATKLTDCVFIGDAESSQDPEFIELNKITHIINCAGRQLPNLWERHGLRYLTFPWDDTEACILF 64
[Close]
BLAST of mRNA_P-wetherbeei_contig1108.1.1 vs. uniprot
Match: D7G780_ECTSI (Dual specificity phosphatase, catalytic domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G780_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 3.530e-29
Identity = 50/64 (78.12%), Postives = 55/64 (85.94%), Query Frame = 1 
Query:   19 MTTKVKDALFIGDAEASQDPDFLELNKITYIINCAGRQLPNLWEQHGLRYLTFPWDDALDCVLF 210
            M TK+ D LFIGDAEASQDP+F+ELNKIT++INCAGRQLPNLWEQHGL YLTFPW    DC LF
Sbjct:    1 MATKINDGLFIGDAEASQDPEFIELNKITFVINCAGRQLPNLWEQHGLHYLTFPWTSDPDCTLF 64
[Close]
BLAST of mRNA_P-wetherbeei_contig1108.1.1 vs. uniprot
Match: A0A8J2WZF7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZF7_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 4.470e-22
Identity = 39/64 (60.94%), Postives = 51/64 (79.69%), Query Frame = 1 
Query:   19 MTTKVKDALFIGDAEASQDPDFLELNKITYIINCAGRQLPNLWEQHGLRYLTFPWDDALDCVLF 210
            M T++KD +F+ D E+SQD +F+E+NKI+Y+INCAGRQLPNLW  HG+RYLTF W+D     LF
Sbjct:    1 MATRIKDGIFVADGESSQDGEFVEMNKISYVINCAGRQLPNLWAPHGIRYLTFSWEDEPSYRLF 64
[Close]
BLAST of mRNA_P-wetherbeei_contig1108.1.1 vs. uniprot
Match: A0A5A8DTZ8_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DTZ8_CAFRO)

HSP 1 Score: 87.4 bits (215), Expect = 1.260e-19
Identity = 38/64 (59.38%), Postives = 49/64 (76.56%), Query Frame = 1 
Query:   19 MTTKVKDALFIGDAEASQDPDFLELNKITYIINCAGRQLPNLWEQHGLRYLTFPWDDALDCVLF 210
            M  K+KD LF+GDAEA+QD DFL  NKI  IINC+GRQ PNL+E  G+RYLT+ W  + +C++F
Sbjct:    1 MAAKLKDGLFLGDAEAAQDIDFLAANKILKIINCSGRQAPNLYEAAGVRYLTYFWPQSGNCIIF 64
[Close]
BLAST of mRNA_P-wetherbeei_contig1108.1.1 vs. uniprot
Match: A0A5A8DIH3_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DIH3_CAFRO)

HSP 1 Score: 87.4 bits (215), Expect = 1.730e-19
Identity = 38/64 (59.38%), Postives = 49/64 (76.56%), Query Frame = 1 
Query:   19 MTTKVKDALFIGDAEASQDPDFLELNKITYIINCAGRQLPNLWEQHGLRYLTFPWDDALDCVLF 210
            M  K+KD LF+GDAEA+QD DFL  NKI  IINC+GRQ PNL+E  G+RYLT+ W  + +C++F
Sbjct:    1 MAAKLKDGLFLGDAEAAQDIDFLAANKILKIINCSGRQAPNLYEAAGVRYLTYFWPQSGNCIIF 64
[Close]
BLAST of mRNA_P-wetherbeei_contig1108.1.1 vs. uniprot
Match: A0A7S3ID03_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3ID03_9SPIT)

HSP 1 Score: 79.7 bits (195), Expect = 2.280e-17
Identity = 33/61 (54.10%), Postives = 46/61 (75.41%), Query Frame = 1 
Query:   28 KVKDALFIGDAEASQDPDFLELNKITYIINCAGRQLPNLWEQHGLRYLTFPWDDALDCVLF 210
            K+KD LFIGD+ A+QD +F+  NK+T+I+NCAG+Q+PN WE  G+ YLTF W D  +  +F
Sbjct:    6 KIKDGLFIGDSFAAQDQEFVVANKVTHIVNCAGKQVPNHWEGRGVVYLTFQWMDLENQTIF 66
[Close]
BLAST of mRNA_P-wetherbeei_contig1108.1.1 vs. uniprot
Match: A0A422PC29_9TRYP (Putative dual specificity protein phosphatase n=1 Tax=Trypanosoma conorhini TaxID=83891 RepID=A0A422PC29_9TRYP)

HSP 1 Score: 82.0 bits (201), Expect = 1.290e-16
Identity = 33/62 (53.23%), Postives = 48/62 (77.42%), Query Frame = 1 
Query:   19 MTTKVKDALFIGDAEASQDPDFLELNKITYIINCAGRQLPNLWEQHGLRYLTFPWDDALDCV 204
            +  +VKD +F+G+A A+QD DF+E+NKIT+IINCAG +LP+L+   G++YLTFPW D    +
Sbjct:    5 IAVRVKDGIFVGNAIAAQDLDFIEMNKITHIINCAGGELPDLFAHEGVKYLTFPWRDTTGSI 66
[Close]
BLAST of mRNA_P-wetherbeei_contig1108.1.1 vs. uniprot
Match: A0A812FUM3_9DINO (Hypothetical protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812FUM3_9DINO)

HSP 1 Score: 76.3 bits (186), Expect = 1.640e-16
Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 1 
Query:   28 KVKDALFIGDAEASQDPDFLELNKITYIINCAGRQLPNLWEQHGLRYLTFPWDDA 192
            K+KD LF+GD  A+QD +F+  NK+T +INCAGRQ+PN WE  G+ YLT+ W DA
Sbjct:   15 KIKDGLFVGDELAAQDLEFVVANKVTRVINCAGRQVPNHWESIGVAYLTYYWIDA 69
[Close]
BLAST of mRNA_P-wetherbeei_contig1108.1.1 vs. uniprot
Match: A0A3R7MFE4_TRYRA (Putative dual specificity protein phosphatase n=3 Tax=Trypanosoma rangeli TaxID=5698 RepID=A0A3R7MFE4_TRYRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.410e-16
Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 1 
Query:   19 MTTKVKDALFIGDAEASQDPDFLELNKITYIINCAGRQLPNLWEQHGLRYLTFPWDDALDCV 204
            +  +VKD +F+G+  ASQD DF+E+NKIT+IINCAG +LP+L+   G++YLTFPW D    +
Sbjct:    5 IAVRVKDGIFVGNVIASQDRDFIEMNKITHIINCAGGELPDLFVHDGVKYLTFPWRDTTGSI 66
[Close]
BLAST of mRNA_P-wetherbeei_contig1108.1.1 vs. uniprot
Match: J9I6W0_9SPIT (Dual specificity phosphatase, catalytic domain containing protein n=2 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9I6W0_9SPIT)

HSP 1 Score: 80.9 bits (198), Expect = 3.370e-16
Identity = 36/61 (59.02%), Postives = 47/61 (77.05%), Query Frame = 1 
Query:   28 KVKDALFIGDAEASQDPDFLELNKITYIINCAGRQLPNLWEQHGLRYLTFPWDDALDCVLF 210
            K+KDALFIGD  A+QD +F+  NK+T+IINCAG+Q+PN WE  G+ YLTF W D  + +LF
Sbjct:   30 KIKDALFIGDEFAAQDLEFVVANKVTHIINCAGKQVPNHWEPIGVTYLTFFWFDQENQILF 90
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1108.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CE08_9STRA1.890e-2978.13Tyrosine-protein phosphatase domain-containing pro... [more]
D7G780_ECTSI3.530e-2978.13Dual specificity phosphatase, catalytic domain con... [more]
A0A8J2WZF7_9STRA4.470e-2260.94Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A5A8DTZ8_CAFRO1.260e-1959.38Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A5A8DIH3_CAFRO1.730e-1959.38Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A7S3ID03_9SPIT2.280e-1754.10Hypothetical protein (Fragment) n=1 Tax=Strombidiu... [more]
A0A422PC29_9TRYP1.290e-1653.23Putative dual specificity protein phosphatase n=1 ... [more]
A0A812FUM3_9DINO1.640e-1658.18Hypothetical protein n=3 Tax=Symbiodinium TaxID=29... [more]
A0A3R7MFE4_TRYRA2.410e-1653.23Putative dual specificity protein phosphatase n=3 ... [more]
J9I6W0_9SPIT3.370e-1659.02Dual specificity phosphatase, catalytic domain con... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1108contigP-wetherbeei_contig1108:1..453 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G780
Preferred nameDUSP22
PFAMsDSPc
Model size210
Max annot lvl2759|Eukaryota
KEGG koko:K04459,ko:K14165
KEGG Pathwayko04010,map04010
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000188,GO:0001932,GO:0001933,GO:0001934,GO:0002682,GO:0002683,GO:0002694,GO:0002695,GO:0002697,GO:0002698,GO:0002703,GO:0002704,GO:0002706,GO:0002707,GO:0002709,GO:0002710,GO:0002819,GO:0002820,GO:0002822,GO:0002823,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006357,GO:0006464,GO:0006469,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0007154,GO:0007162,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007179,GO:0007275,GO:0007399,GO:0008138,GO:0008150,GO:0008152,GO:0008219,GO:0008283,GO:0009719,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0012501,GO:0014013,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0022008,GO:0022407,GO:0022408,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030154,GO:0030155,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031399,GO:0031400,GO:0031401,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032872,GO:0032874,GO:0033673,GO:0035335,GO:0036211,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042578,GO:0043086,GO:0043170,GO:0043405,GO:0043407,GO:0043408,GO:0043409,GO:0043410,GO:0043412,GO:0043549,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045595,GO:0045685,GO:0045859,GO:0045892,GO:0045934,GO:0045936,GO:0045937,GO:0046328,GO:0046330,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048699,GO:0048713,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050776,GO:0050777,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050854,GO:0050856,GO:0050858,GO:0050860,GO:0050863,GO:0050865,GO:0050866,GO:0050868,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051250,GO:0051252,GO:0051253,GO:0051338,GO:0051348,GO:0051716,GO:0051960,GO:0060255,GO:0060284,GO:0065007,GO:0065009,GO:0070302,GO:0070304,GO:0070372,GO:0070374,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071559,GO:0071560,GO:0071704,GO:0071900,GO:0071901,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0140096,GO:1901564,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1903037,GO:1903038,GO:1903506,GO:1903507,GO:2000026,GO:2000112,GO:2000113,GO:2001141
Exons2
Evalue4.47e-30
EggNOG OGsCOG2453@1|root,KOG1716@2759|Eukaryota
EC3.1.3.16,3.1.3.48
Descriptionprotein tyrosine/serine/threonine phosphatase activity
Cds size192
COG categoryT
BRITEko00000,ko00001,ko01000,ko01009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185896.463455-CDS-P-wetherbeei_contig1108:0..1111683185896.463455-CDS-P-wetherbeei_contig1108:0..111Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1108 1..111 -
1683185896.4723108-CDS-P-wetherbeei_contig1108:354..4351683185896.4723108-CDS-P-wetherbeei_contig1108:354..435Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1108 355..435 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185896.4796562-UTR-P-wetherbeei_contig1108:435..4531683185896.4796562-UTR-P-wetherbeei_contig1108:435..453Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1108 436..453 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1108.1.1prot_P-wetherbeei_contig1108.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1108 1..435 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1108.1.1

>prot_P-wetherbeei_contig1108.1.1 ID=prot_P-wetherbeei_contig1108.1.1|Name=mRNA_P-wetherbeei_contig1108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=64bp
MTTKVKDALFIGDAEASQDPDFLELNKITYIINCAGRQLPNLWEQHGLRY
LTFPWDDALDCVLF
back to top

mRNA from alignment at P-wetherbeei_contig1108:1..453-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1108.1.1 ID=mRNA_P-wetherbeei_contig1108.1.1|Name=mRNA_P-wetherbeei_contig1108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig1108:1..453- (Phaeothamnion wetherbeei SAG_119_79)
CCTGCCCCCTTTACAGATATGACGACGAAGGTCAAGGATGCGCTATTCAT
TGGCGATGCAGAGGCGTCGCAAGATCCCGATTTTCTCGAGCTTAACAAGG
TAAATCGAGCGAGCAGCGGACCCAAAGCCGGCAAAAGAGTCCAGTACTCC
TTTTTCTTTCAAGAATCTTCCTTCTGCCTTCCCCAGCCTTCTCTCTCAGA
CACGTCGATGAGTATTTGCGCTGTCCCCTATTAGTGTAATACTCACGCAT
CTCCCGGCGTCGCATCAAGACCCACTCCCCTTCTCCTTACTTCATTCGCA
AGCTTCAACTCACCACTCATTCACTTGCTTATGGTTGTGCAGATCACGTA
CATCATCAACTGCGCCGGGCGGCAGCTGCCCAACCTGTGGGAGCAGCACG
GGCTGCGCTACCTGACGTTCCCGTGGGACGACGCGCTCGACTGCGTGCTC
TTC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1108:1..453-

>mRNA_P-wetherbeei_contig1108.1.1 ID=mRNA_P-wetherbeei_contig1108.1.1|Name=mRNA_P-wetherbeei_contig1108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=192bp|location=Sequence derived from alignment at P-wetherbeei_contig1108:1..453- (Phaeothamnion wetherbeei SAG_119_79)
ATGACGACGAAGGTCAAGGATGCGCTATTCATTGGCGATGCAGAGGCGTC
GCAAGATCCCGATTTTCTCGAGCTTAACAAGATCACGTACATCATCAACT
GCGCCGGGCGGCAGCTGCCCAACCTGTGGGAGCAGCACGGGCTGCGCTAC
CTGACGTTCCCGTGGGACGACGCGCTCGACTGCGTGCTCTTC
back to top