mRNA_P-wetherbeei_contig1107.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1107.2.1
Unique NamemRNA_P-wetherbeei_contig1107.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1107.2.1 vs. uniprot
Match: D8LSU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU3_ECTSI)

HSP 1 Score: 446 bits (1147), Expect = 1.460e-126
Identity = 481/1420 (33.87%), Postives = 625/1420 (44.01%), Query Frame = 1
Query:    1 WAVGHARGMEARRRWPHDALRVARAVSEASLTVLGPAGAVRTPAAALAAAAALPPAGTAIGGGSNCNGWGHDPLEALTAALEDLVDAWDAHGLCVGLHEWERLGAAGMALLPLRRVHDPALLPLEVSHHVRPLAHRHGLDADALLLDFVLASCSGWHTAARAAVGTTFRGRGXXXXXXXXXXXXXXXXXXA---ERRAVAAVRCMSPAA---ASLRARAVLTLVHAASCPCSPELWSLAREAAGWGSSGGSGAYGGACGVGPAAEELAEAARALALADVVRRHRVDGFDPVDPAHASQLLEHVASRVGCAAALEDALQVAACYRHLDERRAYVEFLQNLA-------MTPPPPSLASVASATESIEEALVAAVAEAGTVTAGTGEPAVRGGAWEARLCRQAARVEGVLRSIADRRLLRDVAQEALLFCVRTLEDIEMDAVEEGLPPGRLMAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXRTQEAQCAAVAASVLAAVLHETEWQAPSEEVAAPPFGAASAAAGW-RVPRLHVDAAALVSDLRRLRSLQSEFGLFPSLMTLRGNPE--ACWRIAAGGSQAL---LKQGGGGGMGPNFHSRRKKCARAARSSGGAGDNXXXXXXXXXXXTADGDAQEEEVLHALLRRTRRPAELLGVPLDRVVAHAAAEAARQGRVGEVLALCRGLLDTRIPMERGTVAAALRDVALTLSGLVAAGTAXXXXXXXXXXXXXXXIXXXXXXXGDGGPDETSVQQFLQATAASLRALRRSTLLCDGSGLPRVADFMQGTELVAAVLARSGGGEGLMPLVRGDSDGFGGRAAFGRRNGGGAAGDR-GGRXXXHFGAXXXXXXXXXXXXAENGQGGIFGGETLHSWARGGGLVLPLGEALAAVGKFAFLELQCRLANAXXXXXXXXXXXXXXXXXXXXSRAHGSAGNENSGKSTALAXXXXTGMA-------AALADAADRLAEVLSAHGAHQLCLRALAGMAA-PAXXXXXXXXXXXXXXXARVLAFRPLDDALGTGYLLALPIKAAFEVFRRAIPAASSDFGRLSALACVGVGAAGMWGHHELLAQCRDLERNAHWWRVLSALGVRFDHRGFRQDGASAGXXXXXXXXXXXXXXXXXXXGRGEYQKTLVGPLLEQSGGDLQLALEFCDHYHIPDAFPCLLYAERELSPPAAGAAATKTDERVMAVLPDIHGHQLVALLRHLLSPAARRVAGTDHERLVFLFELLAT----RLELDANENGGSSGXXXXXXXXXXXXXXXXXXXXXXXXTAAECDRSLAVLRVL-RSYRGVR--TAPGAIANGDSSDD-SGRLCFWAVRADPWAVLQPELNADTILKLIPLAGPLGVEPSEFYSRLVVQLFCGXXXXXXXXXXXXXXGGITIV--MPPVAEVRHWLGEIRSLALACVTAQWTA 4146
            WAV HAR +E+  + PH AL  ARAV++ S  VLG A  +    +A  AAA    A    G   +   W  D L+AL   L+DL  AWD H L + L  +ERL    +    L RV  P  LP E++HHV PLA R+GLD D++LLD+ +  C+      R A   T  G  XXXXXX                E+RAVA  RCMSP     + LR+RAVL L +AAS P S  L  L +EA  WG              G    EL  AA  L+L+ +V+RH                   V ++V C  AL+D LQVA  Y HL E   YVEFL+NLA          P                 +++ ++  G    G G  +  GG+  A L     RV GVL  +      R VA+E LL+ VR LED+E+DA   GL PG+L    A                XXXXXXXXXXX                                         A  W ++  L    A + SDLRR+ +LQ+EFG F SL TL  NP   ACW     G   L   L      G  P+  S+ KK A A          XXXXXXXXXX  A   A     L  LL R RR +ELLGV    VV+H A EAA +G+V + + LC  L   +   +    A ALRD A  LS  VA                            D    E +    LQA A S+R LR+S +LC    LP   D +Q +E VAAVL R  GG+ L  L+  D       A+  R +     G + GG      GA               G   + G   L+ W  G G VLPL EAL  V  F   E++ R+A                            +G+  +    +LA    T  A       A L  AA  L   L   GA  LC+R +AGM A P                 +V+ F  +D  L  GY+LA+P + A++ FRR I  +S D+GRL  LA VG+ AA  W +H+LL QC ++ER++HWW VL++LG+ FD+RGF +   S                       GEYQK+LV  LLE+SG DL LALEFC+ Y + +AFPCLLY + +L  P          ER+  VLP +HG  L  +LRH+L      +   D+ERL F++  L +      E D+ E                               AA  +   A  R   R    VR  TAP       +S+  + RL F A+  DPWAVL+ +L  D++  L+PLA PLG+   EFYSRLV  +                 GG +    +P  + ++ WL +I++ ALAC TAQ  A
Sbjct:  925 WAVDHAREVESLEKRPHGALLFARAVAQGSGRVLGSAAGLLAIHSAELAAAEAEAAARRTGPSDHWKRWKPDGLDALGKTLDDLTHAWDVHRLRLPLSTFERLPRDVVLFRVLDRVQSPDWLPEEINHHVLPLAKRYGLDPDSVLLDY-MRICAETMVTRRRAHNNTSSGXXXXXXXXTAPGPGGANGASGLTTEQRAVAVARCMSPGEGCRSELRSRAVLALANAASFPFSEGLRDLVQEALSWG--------------GALDAELRRAATTLSLSQIVQRH-------------------VLAQVQCPTALDDGLQVAHAYSHLSETNVYVEFLENLAGSYAGRGSADPDXXXXXXXXXXXXXXXGIISEIS--GKAGPGRGR-SCGGGSLAADLAAHRVRVAGVLHRLPAGDARR-VAEEVLLYLVRLLEDLELDAGAAGLKPGQLWGCKAISAAEENGTAAAFAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXAGDWEKLGNL----ATMASDLRRVSALQTEFGAFTSLKTLN-NPRGRACWNTMREGLVTLEEYLHGDNKAGSVPSAGSKGKKTA-AXXXXXXXXXXXXXXXXXXXXRKATASA-----LPRLLHRARRLSELLGVAWTSVVSHLANEAATRGKVPQAVGLCHMLFRDQAATDERAAALALRDTAKALSTFVANQA------------------HMGALRADDLEGERARTAVLQAMAQSVRGLRQSAVLCASEELPLTLDLLQASETVAAVLCRCEGGDKLEALMVADLSPPSLDASKSRYSVAEGLGSKIGGSGGRAAGALSLSRSEEEEMEEWGGYHALGG---LYKWYPGDGRVLPLEEALKLVSVFVRQEMRLRVALV--------------------------SGDAVAASPVSLAGVPSTTEALLSSRWEAGLESAASPLLSFLQGMGAQHLCVRVVAGMMAIPPPSAVEVLGDAFSGLADKVMEFNHIDCPLAIGYMLAMPTRQAYDTFRRIIRYSSDDYGRLRVLAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGIAFDNRGFSRADRSQVP--------------------GEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGM-ICDRDYERLAFVYGTLLSDKCQEEEEDSEEEVKRLEDSLEALAILKDYTSPWPLDVEGRPVAAVAEGGEAGARGGGRGEVDVRSSTAPPTTVGSPASEVYARRLPFMALVKDPWAVLEVQLRPDSVSNLVPLADPLGLGVGEFYSRLVAGML-------DKGTPLGDGGGASPPGPVPTFSTLQPWLEKIKNPALACTTAQRVA 2212          
BLAST of mRNA_P-wetherbeei_contig1107.2.1 vs. uniprot
Match: A0A835ZDW9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW9_9STRA)

HSP 1 Score: 252 bits (643), Expect = 6.610e-64
Identity = 338/1135 (29.78%), Postives = 440/1135 (38.77%), Query Frame = 1
Query: 1144 ARLCRQAARVEGVLRSIADRRLLRDVAQEALLFCVRTLEDIEMDAVEEGLPPGRLMAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXRTQEAQCAAVAASVLAAVLHETEWQAPSEEVAAPPFGAASAAAGWRVPRLHVDAAALVSDLRRLRSLQSEFGLFPSLMTLRGNPEACWRIAAGGSQALLKQGGGGGMGPNFHSRRKKCARAARSSGGAGDNXXXXXXXXXXXTA-DGDAQEEEV-----LHALLRRTRRPAELLGVPLDRVVAHAAAEAARQGRVGEVLALCRGLLDTRIPMERGTVAAALRDVALTLSGLVAAGTAXXXXXXXXXXXXXXXIXXXXXXXGDGGPDETSVQQFLQATAASLRALRRSTLLCDGSGLPRVADFMQGTELVAAVLARSGGGEGL--MPLVRGDSDGFGGRAAFGRRNG---------------------------------------GGAAGDRGGRXXXHFGAXXXXXXXXXXXXAENGQGGIFGGETLHSWARGGGLVLPLGEALAAVGKFAFLELQCRLANAXXXXXXXXXXXXXXXXXXXXSRAHGSAGNENSGKSTALAXXXXTGMAAALADAADRLAEVLSAHGAHQLCLRALAGMAAPAXXXXXXXXXXXXXXXARVLAFRPLDDALGTGYLLALPIKAAFEVFRRAIPAASSDFGRLSALACVGVGAAGMWGHHELLAQCRDLERN----------------------------------------------AHWWR------------------------------VLSALGVRFDHRGFRQDGASAGXXXXXXXXXXXXXXXXXXXGRGEYQKTLVGPLLEQSGGDLQLALEFCDHYHIPDAFPCLLYAERELSPPAAGAAATKTDERVMAVLPDIHGHQLVALLRHLLSPAARRVAGTDHERLVFLFELLATRLELDANENGGSSGXXXXXXXXXXXXXXXXXXXXXXXXTAAECDRSLAVLRVLRSYRGVRTAPGAIA---------NGDSSDDSGRLCFWAVRADPWAVLQPELNADTILKLIPLAGPLGVEPSEFYSRLVVQLFCGXXXXXXXXXXXXXXGGITIVMPPVA--EVRHWLGEIRSLALACVTAQWTA 4146
            A L    ARV   L+ +  R  +  VAQEALLFC+R LE++E  A  +GLPPG++  A   XXXXXXXXXXXXXX XXXXXXX           AA  A+ L A L                          RV   H           R R+LQ EFGLFPS+ TL    +  W        A+L              R +  A      G  G +XXXXXXXXXXX A    A+  EV     L A L   RR  ELLGV   R+V H A EA   GRV E L LC G L      +    A ALR+ A+ LS  V A  +                         G          L+A A S+ ALR S   C G  L +  + +QG+E+VAAVL+RS  GE       V  D D    R   G +                                         GG++ +       + G             A   +GG    E    W RG G+VLP  ++LA  G FA  EL+ R  +                               N        XXXX   A  L  AA RL+E L   GA QLCLR LAGM+                   +VL+   +D  LG GY+LALP+  AF+VFR  +     D+ R   LA +G+  A +W +  +LAQC +LER                                               +  W+                              VLS+L +  + R F+  G                        R  Y + LV PLL  SGGDL LALEFCDH++I +A PC LY E++L+         +  E +++VLPD+H H LV LL HLL+ +   +  TD+ERL F + LL  R+     E                                 +CD + A+L VLRSYR       + A         +G+    S R+ F  ++  P  VL P+L  DT+ +L+PLA PLG++P + Y+ L+  L                         P A      WL  I+S+ LAC+TAQW A
Sbjct:  942 AALAAHGARVAAALQRVPKRDAVA-VAQEALLFCLRWLEELEAQAGADGLPPGQISCASGAXXXXXXXXXXXXXXEXXXXXXX-----------AAATAADLCAFL--------------------------RVECAHAAG--------RARALQVEFGLFPSVRTLSRRADLAW--------AML--------------RARLAAAELCWRGSTGSSXXXXXXXXXXXAALPAPAKRWEVAPARSLGAQLVGARRLGELLGVKWSRIVRHLAHEATLAGRVQEALDLCSGNLKEG---DDSDAALALRETAVALSAYVVAAASGKH----------------------GSTGGALPAPALRAAAESVFALRGSAAACSGEELAQTLELLQGSEVVAAVLSRSAVGEASANFNFVLQDFD----RLLHGEQKAQHHLNAPALPQQPAXXXXXXXXXXXXXKHVASQLTAAPFGGSSVEDSENHQLNGGFLSTAAAAAGAAHAAAVEGGALHAE----WYRGVGMVLPPAQSLALAGAFAMQELRARRCS-------------------------------NGXXXXXXXXXXXXAAALGLTSAAMRLSEFLLGRGAQQLCLRVLAGMSLVPPQALPAFHAALAGLAEKVLSSSSVDATLGLGYMLALPVVDAFQVFRGVMSRPDGDYARRRGLAALGMDLARIWDNPNVLAQCTELERRYFKFTVSVMKLKFTGACSRRXXXXXXXXXXXXXXXXXXXXXXXXXRSKGWQSACKDXXXXXXXXXXXXXXXXXXXXXXXMHVLSSLDIPIEWRKFQAPGGGGAAKPAALAE------------RDRYMRGLVQPLLASSGGDLSLALEFCDHFNIEEACPCFLYVEQQLT-----GGDARYQEHILSVLPDVHCHHLVRLLNHLLTLSEGGILDTDYERLAFAYGLLMERVPQGTPE-------------------------------WQQCDNAQAILTVLRSYRSPLPLDASGAPLPPRPHPPSGEEDPPSKRIPFRPLQQRPMEVLLPQLTPDTVAQLLPLAAPLGLQPGDLYAGLIRSLLGA----------------------PAAFDAAMRWLPSIKSMPLACLTAQWVA 1874          
BLAST of mRNA_P-wetherbeei_contig1107.2.1 vs. uniprot
Match: A0A6H5KS52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS52_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 4.670e-60
Identity = 242/801 (30.21%), Postives = 324/801 (40.45%), Query Frame = 1
Query: 1864 LHALLRRTRRPAELLGVPLDRVVAHAAAEAARQGRVGEVLALCRGLLDTRIPMERGTVAAALRDVALTLSGLVAAGTAXXXXXXXXXXXXXXXIXXXXXXXGDGGPDETSVQQFLQATAASLRALRRSTLLCDGSGLPRVADFMQGTELVAAVLARSGGGEGLMPLVRGD--SDGFGG---RAAFGRRNGGGAAGDRGGRXXXHFGAXXXXXXXXXXXXAENGQGGIFGGETLHSW---------ARGG-GLVLPLGEALAAVGKFAFLELQCRLANAXXXXXXXXXXXXXXXXXXXXSRAHGSAGNENSGKSTALAXXXXTGMA-------AALADAADRLAEVLSAHGAHQLCLRALAGMAAPAXXXXXXXXXXXXXXXARVLAFRPLDDALGTGYLLALPIKAAFEVFRRAIPAASSDFGR------LSALACVGVGAAGMWGHHELLAQCRDLERNAHWWRVLSALGVRFDHRGFRQDGASAGXXXXXXXXXXXXXXXXXXXGRGEYQKTLVGPLLEQSGGDLQLALEFCDHYHIPDAFPCLLYAERELSPPAAGAAATKTDERVMAVLPDIHGHQLVALLRHLLSPAARRVAGTDHERLVFLFELLATRLELDANENGGSSGXXXXXXXXXXXXXXXXXXXXXXXXTAAECDRSLAVLRVLRSYRGVRTAPGAIANGDSSDD--SG----------RLCFWAVRADPWAVLQPELNADTILKLIPLAGPLGVEPSEFYSRLVVQLFCGXXXXXXXXXXXXXXGGITIVMPPVAEVRHWLGEIRSLALACVTAQWTA 4146
            L  LL R RR +ELLGV    VV+H A EAA +G+V E + LC  L   +   +    A ALRD A  LS  VA                            D    E +    LQA A S+R LR+S  LC    LP   D +Q +E VAAVL R  GG+ L  L+  D      G    R++     G    G RGG      GA               G   + G   + +W         A GG G VLPL EAL  V  F   E++ R+A                             G+  +    +LA    T  A       A L  AA  L   L   GA  LC+R +AGM                                     +ALP  +A EV   A    +   GR      L  LA VG+ AA  W +H+LL QC ++ER++HWW VL++LG+ FD+RGF +   S                       GEYQK+LV  LLE+SG DL LALEFC+ Y + +AFPCLLY + +L  P          ER+  VLP +HG  L  +LRH+L      +   D+ERL F++    T L     +    +                         + A+  R   +L+  R  +G       + +        SG          RL F A+  DPWAVL+ +L  D++  L+PLA PLG+   EFYSRLV  +                 G +    P  ++++ WL +I++ ALAC TAQ  A
Sbjct:   88 LPRLLHRARRLSELLGVAWTSVVSHLANEAATRGKVPEAVGLCHMLFRDQATTDERAAALALRDTAKALSTFVANQA------------------HMGALRADDLEGERARTAVLQAMAQSVRGLRQSAALCASEELPLTVDLLQASETVAAVLCRCEGGDKLEALMAADLSPSSLGASKSRSSVAEGPGNKIGGSRGGAP----GALSLSRSEEEEMEEWGGYHALGGLYKVRAWRTRTFRHGVAYGGDGRVLPLEEALKLVSVFVRQEMRLRVALV--------------------------GGDAVAAPPVSLAGVPSTTEASLSSRWEAGLESAASPLLSFLQGMGAQHLCVRVVAGM-------------------------------------MALPPPSAVEVLGDAFSGLADKVGRKHTGTRLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVP--------------------GEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGLPCVSPHDVSYQERITEVLPSVHGVFLSRMLRHMLETPGM-ICDRDYERLAFVY---GTLLSDKCQKVEPMNEQRTRKISSASRLSPSSRTTRAPGRSMAKGGRWRRLLKEARRGQGAGGVERWMFDHPRRPQLPSGVPRARRVYARRLPFMALVKDPWAVLEVQLKPDSVSNLVPLADPLGLGVGEFYSRLVAGML-NKGTPLGDGDGASPNGPV----PTFSDLQPWLEKIKNPALACTTAQRVA 774          
BLAST of mRNA_P-wetherbeei_contig1107.2.1 vs. uniprot
Match: A0A507DNX7_9FUNG (Rod_C domain-containing protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DNX7_9FUNG)

HSP 1 Score: 114 bits (286), Expect = 9.740e-22
Identity = 94/352 (26.70%), Postives = 148/352 (42.05%), Query Frame = 1
Query: 2944 RVLAFRPLDDALGTGYLLALPIKAAFEVFRRAIPAASSDFGRLSALACVGVGAAGMWGHHELLAQCRDLERNAHWWRVLSALGVRFDHRGFRQDGASAGXXXXXXXXXXXXXXXXXXXGRGEYQKTLVGPLLEQSGGDLQLALEFCDHYHIPDAFPCLLYAERELSPPAAGAAATKTD-ERVMA-VLPDIHGHQLVALLRHLLSPAARRVAGTDHERLVFLFELLATRLELDANENGGSSGXXXXXXXXXXXXXXXXXXXXXXXXTAAECDRSLAVLRVLRSYRGVRTAPGAIANGDSSDDSGRLCFWAVRADPWAVLQPELNADTILKLIPLAGPLGVEPSEFYSRLVVQL 3993
            +VL+ R +D +L  GY+L LP+  AFE F+  + + ++D+ RL   A +G  A   W     +  C+ L  NA WW     LG+ FD   FR+                           GEYQ+ L+   LE++  D+   LEF  +Y + D      YA+R L    + A ++ +D E  MA +L DI          ++L      V+  D+ERL +LF  + T     +       G                         ++  D     ++   +   +R  P A           RL F A+  DPW VL+PELN +T+ +L+PL  PLG+   +FY  ++  +
Sbjct: 1364 QVLSSRYIDQSLAVGYMLYLPLTNAFEAFKGGLTSVATDYSRLQTFASIGEVAGVAWNQRTFVLDCQTLSSNARWWHQFRLLGIPFDDSIFRKSED------------------------GEYQRKLIPLFLERTHLDVTTVLEFARNYRLEDDLVIFEYAKRLL---VSKATSSYSDYENGMALILADIENKDKFL---NVLLEIVTHVSTYDYERLQYLFSQILT---FKSGHQQAEKGRLIIEVLMHYKRYTKPSHQELIEAKSSLWDHE--TVKDSSNENLLRILPMA---------KKRLPFHALIKDPWRVLKPELNKETVSRLLPLCLPLGLPEDDFYMEILQNM 1671          
BLAST of mRNA_P-wetherbeei_contig1107.2.1 vs. uniprot
Match: A0A6H5KRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF9_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 4.490e-20
Identity = 97/265 (36.60%), Postives = 127/265 (47.92%), Query Frame = 1
Query:  574 ERRAVAAVRCMSPAA---ASLRARAVLTLVHAASCPCSPELWSLAREAAGWGSSGGSGAYGGACGVGPAAEELAEAARALALADVVRRHRVDGFDPVDPAHASQLLEHVASRVGCAAALEDALQVAACYRHLDERRAYVEFLQNLAMTPPPPSLASVASATESIE----------EALVAAVAEAGTVTAGTGEPAVRGGAWEARLCRQAARVEGVLRS--IADRRLLRDVAQEALLFCVRTLEDIEMDAVEEGLPPGRLMAAGA 1323
            E+RAVA  RCMSP     + LR+RAVL L +AAS P S  L  L +EA  WG              G    EL  AA  L+L+ +V+R+ V GF+ VD   A++LL HV +            QVA  Y HL E   YVEFL+NLA + P    A   +A                 +++ ++  G    G G  +  GG+    L     RV GVL    + D    R VA+E LL+ VR LED+E+DA   GL PG+L    A
Sbjct:   39 EQRAVAVARCMSPGEGCRSELRSRAVLALANAASFPFSEGLRELVQEALSWG--------------GALDAELRRAATTLSLSQIVQRYHVKGFNLVDAPRATRLLRHVLA------------QVAHAYSHLSETNVYVEFLENLAGSYPGRGSADPDAAXXXXXXXXXXXXXXXSGIISEIS--GKAGPGRGR-SCSGGSLTTDLAAHRVRVAGVLHRLPVGD---ARRVAEEVLLYLVRLLEDLELDAGTAGLKPGQLWGCKA 271          
BLAST of mRNA_P-wetherbeei_contig1107.2.1 vs. uniprot
Match: A0A7S3URC8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URC8_HETAK)

HSP 1 Score: 68.2 bits (165), Expect = 7.860e-9
Identity = 76/201 (37.81%), Postives = 94/201 (46.77%), Query Frame = 1
Query: 3400 DAFPCLLYAERELSPPAAGAAATKTDERVMAVLPDIHGHQLVALLRHLLSPAARRVAGTDHERLVFLFELLATRLELDANENGGSSGXXXXXXXXXXXXXXXXXXXXXXXXTAAECDRSLAVLRVLRSYRGVRTAPGAIANGDSSDDSGRLCFWAVRADPWAVLQPELNADTILKLIPLAGPLGVEPSEFYSRLVVQLFCG 4002
            DAFP LLY E++L  P  G    +  +RV  VLPD+H HQLV LLR   +PAA R    D+ERL++ F LL  R +      G          XXXXXXXXXXXXX     TA E  R L       +Y+                   RL F  + AD W  + PEL   T  +L  L    G    E Y+RL ++L  G
Sbjct:    1 DAFPALLYVEQQLLAPPRGPEDREYQDRVAGVLPDVHEHQLVILLRRA-APAALR--PWDYERLLWAFGLLRDRCD-----EGQEEDARRYRKXXXXXXXXXXXXXARPLRTADEDGRPLHP-----AYQR------------------RLPFGGLLADFWGCVAPELAPATAERLAALVVLFGHPEDELYARLAIKLVEG 170          
BLAST of mRNA_P-wetherbeei_contig1107.2.1 vs. uniprot
Match: F0YJY8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJY8_AURAN)

HSP 1 Score: 72.0 bits (175), Expect = 9.890e-9
Identity = 107/345 (31.01%), Postives = 142/345 (41.16%), Query Frame = 1
Query:    1 WAVGHARGMEARRRWPHDALRVARAVSEASLTVLGPAGAVRTPAAALAAAAALPPAGTAIGGGSNCNGWGHDPLEALTAALEDLVDAWDAHGLCVGLHEWERLGAAGMALLPLRRVHDPALLPLEVSHHVRPLAHRHGLDADALLLDFVLASCSGWHTAARAAVGTTFRGRGXXXXXXXXXXXXXXXXXXAERRAVAAVRCMSPAAASLRARAVLTLVHAASCPCSPELWSLAREAAGWGSSGGSGAYGGACGVGPAAEELA----EAARALALADVVRRHRVDGFDPVDPAHASQLLEHVA------SRVGCAAALEDALQVAACY-RHLDERRAYVEFLQNLA 1002
            WA   ARG+EAR R   DALRVA  V  A   + GP  AV   A+       L      +           D L AL   L  ++   D HG+   L  +E    + +A   L RV DPA L  E+  HVRP+   HG+D DALLLD+  A C+     ARA   T  + R                   A R  +     +  A   L A   L ++  A  P    + +LA +        G    G    + PA  ++A    +AAR + L  +  +HRV  FD  D  HA  LL+ V       S +     LEDA  +A  Y   L  R A V F+QNL+
Sbjct:  587 WATDAARGLEARGRLD-DALRVAGTVLRA---LEGP-HAVGALASGTRGDVWLADLDRVVATDDEQPNRPRDELRALYGTLRHVLSLRDDHGVASTLDSYESADKSAIARALLDRVEDPAELGTEIDAHVRPICGEHGVDCDALLLDYARA-CARAFAVARA---TEKKRRSGGRGDAADATDARLARALAVREEI-----VDDAKRQLGA---LEVLERARPPYGAAVVALATDV-------GDDDGGDEDRLDPAERDVATRLRDAARLVTLTHLAHKHRVANFDAGDAGHALFLLDRVVDGSWRLSGLDPRDVLEDARTLARAYPATLSLRGAVVAFVQNLS 907          
BLAST of mRNA_P-wetherbeei_contig1107.2.1 vs. uniprot
Match: A0A7S4NG27_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NG27_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.720e-6
Identity = 36/99 (36.36%), Postives = 56/99 (56.57%), Query Frame = 1
Query: 2965 LDDALGTGYLLALPIKAAFEVFRRAIPAASS--DFGRLSALACVGV----------GAAGMWGHHEL-LAQCRDLERNAHWWRVLSALGVRFDHRGFRQ 3222
            +D  L   Y+L+LP+K AF+V++  +P+A +  DFGR+  +A +GV            AG W + ++ ++QC+ L  NA WW  L   GV FD R F +
Sbjct: 1589 IDSQLAVAYILSLPLKLAFKVYKACLPSAMTRRDFGRVVTIANIGVRCGICISPSQSKAGSWSNQQMFVSQCQRLSANAKWWHSLQNHGVTFDPRLFEE 1687          
BLAST of mRNA_P-wetherbeei_contig1107.2.1 vs. uniprot
Match: A0A7S4RBX4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RBX4_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.310e-5
Identity = 42/108 (38.89%), Postives = 56/108 (51.85%), Query Frame = 1
Query: 2965 LDDALGTGYLLALPIKAAFEVFRRAIPAASS--DFGRLSALACVGVGAAGM-----------------WGHHE-LLAQCRDLERNAHWWRVLSALGVRFDHRGFRQDG 3228
            +D  L   YLL+LPIK AF+V+R ++P+A S  DF RL+ LA VG+ A G+                 W +    ++QCR L  NA WW +L    V FD R F   G
Sbjct:  261 IDSQLAVTYLLSLPIKLAFKVYRASLPSAMSKRDFTRLAYLANVGLKAGGVELTSDASQEQERKSFIGWTNQRTFISQCRRLSSNAKWWDLLQKNHVGFDPRRFDAKG 368          
BLAST of mRNA_P-wetherbeei_contig1107.2.1 vs. uniprot
Match: A0A7S1ZMM4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZMM4_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.380e-5
Identity = 42/108 (38.89%), Postives = 56/108 (51.85%), Query Frame = 1
Query: 2965 LDDALGTGYLLALPIKAAFEVFRRAIPAASS--DFGRLSALACVGVGAAGM-----------------WGHHE-LLAQCRDLERNAHWWRVLSALGVRFDHRGFRQDG 3228
            +D  L   YLL+LPIK AF+V+R ++P+A S  DF RL+ LA VG+ A G+                 W +    ++QCR L  NA WW +L    V FD R F   G
Sbjct:  440 IDSQLAVTYLLSLPIKLAFKVYRASLPSAMSKRDFTRLAYLANVGLKAGGVELTSDASQEQERKSFIGWTNQRTFISQCRRLSSNAKWWDLLQKNHVGFDPRRFDAKG 547          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1107.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LSU3_ECTSI1.460e-12633.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZDW9_9STRA6.610e-6429.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KS52_9PHAE4.670e-6030.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A507DNX7_9FUNG9.740e-2226.70Rod_C domain-containing protein n=2 Tax=Synchytriu... [more]
A0A6H5KRF9_9PHAE4.490e-2036.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3URC8_HETAK7.860e-937.81Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
F0YJY8_AURAN9.890e-931.01Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S4NG27_9STRA1.720e-636.36Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4RBX4_9STRA1.310e-538.89Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1ZMM4_9STRA1.380e-538.89Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1107contigP-wetherbeei_contig1107:1740..6440 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog112098.XP_008615534.1
Preferred nameKNTC1
PFAMsRod_C
Model size4146
Max annot lvl2759|Eukaryota
KEGG koko:K11577
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000075,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000777,GO:0000779,GO:0000793,GO:0000819,GO:0000922,GO:0000940,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005794,GO:0005795,GO:0005819,GO:0005828,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005886,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007030,GO:0007049,GO:0007059,GO:0007079,GO:0007088,GO:0007093,GO:0007094,GO:0007096,GO:0007346,GO:0008104,GO:0008150,GO:0009987,GO:0010256,GO:0010564,GO:0010638,GO:0010639,GO:0010695,GO:0010696,GO:0010948,GO:0010965,GO:0012505,GO:0015629,GO:0015630,GO:0016020,GO:0016043,GO:0017016,GO:0017137,GO:0019899,GO:0019904,GO:0022402,GO:0022607,GO:0030071,GO:0031267,GO:0031334,GO:0031577,GO:0031984,GO:0032879,GO:0032880,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033365,GO:0034501,GO:0034502,GO:0034508,GO:0034613,GO:0034622,GO:0036063,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044427,GO:0044430,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045786,GO:0045787,GO:0045839,GO:0045840,GO:0045841,GO:0045930,GO:0045931,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050000,GO:0050789,GO:0050794,GO:0051020,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051233,GO:0051234,GO:0051276,GO:0051303,GO:0051305,GO:0051382,GO:0051383,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051726,GO:0051781,GO:0051783,GO:0051784,GO:0051785,GO:0051983,GO:0051984,GO:0051985,GO:0051988,GO:0060341,GO:0062033,GO:0065003,GO:0065004,GO:0065007,GO:0070507,GO:0070727,GO:0070925,GO:0071173,GO:0071174,GO:0071459,GO:0071824,GO:0071840,GO:0071944,GO:0090068,GO:0090230,GO:0090231,GO:0090232,GO:0090234,GO:0090235,GO:0090266,GO:0090267,GO:0090268,GO:0098687,GO:0098791,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140014,GO:1901970,GO:1901976,GO:1901978,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902115,GO:1902117,GO:1902423,GO:1903047,GO:1903394,GO:1903504,GO:1903827,GO:1903829,GO:1905340,GO:1905342,GO:1905561,GO:1905818,GO:1905819,GO:1905820,GO:1990423,GO:2000816,GO:2001251,GO:2001252
Exons6
Evalue4.02e-27
EggNOG OGsKOG4256@1|root,KOG4256@2759|Eukaryota
Descriptionregulation of mitotic cell cycle
Cds size4122
COG categoryK
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1107.2.1prot_P-wetherbeei_contig1107.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1107 1764..6440 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185896.0696611-UTR-P-wetherbeei_contig1107:1739..17631683185896.0696611-UTR-P-wetherbeei_contig1107:1739..1763Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1107 1740..1763 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185896.0785964-CDS-P-wetherbeei_contig1107:1763..19161683185896.0785964-CDS-P-wetherbeei_contig1107:1763..1916Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1107 1764..1916 +
1683185896.086015-CDS-P-wetherbeei_contig1107:1939..19781683185896.086015-CDS-P-wetherbeei_contig1107:1939..1978Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1107 1940..1978 +
1683185896.0934234-CDS-P-wetherbeei_contig1107:2027..22861683185896.0934234-CDS-P-wetherbeei_contig1107:2027..2286Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1107 2028..2286 +
1683185896.1005464-CDS-P-wetherbeei_contig1107:2364..35621683185896.1005464-CDS-P-wetherbeei_contig1107:2364..3562Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1107 2365..3562 +
1683185896.1096833-CDS-P-wetherbeei_contig1107:3727..55311683185896.1096833-CDS-P-wetherbeei_contig1107:3727..5531Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1107 3728..5531 +
1683185896.1189928-CDS-P-wetherbeei_contig1107:5771..64401683185896.1189928-CDS-P-wetherbeei_contig1107:5771..6440Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1107 5772..6440 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1107.2.1

>prot_P-wetherbeei_contig1107.2.1 ID=prot_P-wetherbeei_contig1107.2.1|Name=mRNA_P-wetherbeei_contig1107.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1374bp
MEARRRWPHDALRVARAVSEASLTVLGPAGAVRTPAAALAAAAALPPAGT
AIGGGSNCNGWGHDPLEALTAALEDLVDAWDAHGLCVGLHEWERLGAAGM
ALLPLRRVHDPALLPLEVSHHVRPLAHRHGLDADALLLDFVLASCSGWHT
AARAAVGTTFRGRGGGGGMADGGAGGGGGRLLAERRAVAAVRCMSPAAAS
LRARAVLTLVHAASCPCSPELWSLAREAAGWGSSGGSGAYGGACGVGPAA
EELAEAARALALADVVRRHRVDGFDPVDPAHASQLLEHVASRVGCAAALE
DALQVAACYRHLDERRAYVEFLQNLAMTPPPPSLASVASATESIEEALVA
AVAEAGTVTAGTGEPAVRGGAWEARLCRQAARVEGVLRSIADRRLLRDVA
QEALLFCVRTLEDIEMDAVEEGLPPGRLMAAGATAAATTTNGGGNGDDAI
VAEEEENQQDRTQEAQCAAVAASVLAAVLHETEWQAPSEEVAAPPFGAAS
AAAGWRVPRLHVDAAALVSDLRRLRSLQSEFGLFPSLMTLRGNPEACWRI
AAGGSQALLKQGGGGGMGPNFHSRRKKCARAARSSGGAGDNGSGSSGSGS
RGTADGDAQEEEVLHALLRRTRRPAELLGVPLDRVVAHAAAEAARQGRVG
EVLALCRGLLDTRIPMERGTVAAALRDVALTLSGLVAAGTAAAAKERRRG
GGGSGGIGGGSGGDGDGGPDETSVQQFLQATAASLRALRRSTLLCDGSGL
PRVADFMQGTELVAAVLARSGGGEGLMPLVRGDSDGFGGRAAFGRRNGGG
AAGDRGGRSGAHFGADSRAAAEAGGDGAENGQGGIFGGETLHSWARGGGL
VLPLGEALAAVGKFAFLELQCRLANAAAAAEAAALGNGDGGGGGCGSRAH
GSAGNENSGKSTALATAAATGMAAALADAADRLAEVLSAHGAHQLCLRAL
AGMAAPAPAAAAALEAALAAAAARVLAFRPLDDALGTGYLLALPIKAAFE
VFRRAIPAASSDFGRLSALACVGVGAAGMWGHHELLAQCRDLERNAHWWR
VLSALGVRFDHRGFRQDGASAGGGGGSGSGLTGGGSAAAAAGRGEYQKTL
VGPLLEQSGGDLQLALEFCDHYHIPDAFPCLLYAERELSPPAAGAAATKT
DERVMAVLPDIHGHQLVALLRHLLSPAARRVAGTDHERLVFLFELLATRL
ELDANENGGSSGSGSAGSGSSGASSGNSGDGSGLAGTAAECDRSLAVLRV
LRSYRGVRTAPGAIANGDSSDDSGRLCFWAVRADPWAVLQPELNADTILK
LIPLAGPLGVEPSEFYSRLVVQLFCGCGGGGIGGGAGAGDGGITIVMPPV
AEVRHWLGEIRSLALACVTAQWTA
back to top

mRNA from alignment at P-wetherbeei_contig1107:1740..6440+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1107.2.1 ID=mRNA_P-wetherbeei_contig1107.2.1|Name=mRNA_P-wetherbeei_contig1107.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4701bp|location=Sequence derived from alignment at P-wetherbeei_contig1107:1740..6440+ (Phaeothamnion wetherbeei SAG_119_79)
TGGGCGGTCGGCCACGCCCGCGGCATGGAGGCGCGCCGCCGCTGGCCGCA CGACGCGCTCCGCGTCGCGCGCGCCGTCTCGGAGGCATCGCTCACCGTCC TCGGGCCGGCCGGTGCCGTCCGGACCCCGGCGGCGGCGCTGGCGGCGGCG GCGGCCCTGCCGCCGGCAGGAACCGCCGTTATTTCTACCCCCGCACACAG ATCGGCGGCGGCAGCAATTGCAATGGCTGGGGCCATGACGTTGCCGGAAC CGGCCGGTGCGGCGGTAACCGGCGCAGCGGGGCAGGAGCCGCTGGAAGCA CTGACGGCGGCGCTGGAAGACCTGGTAGACGCGTGGGACGCGCACGGGCT GTGCGTCGGGCTGCACGAATGGGAGCGGCTGGGCGCGGCGGGCATGGCGC TCCTGCCGCTGCGGCGGGTGCATGATCCGGCACTGCTGCCGCTGGAGGTG TCGCACCACGTCCGCCCGCTGGCGCACCGCCACGGCCTCGATGCTGACGC ACTGCTGCTGGACTTTGTTCTCGCCAGCTGCTCTGGCTGGCACACTGGTA GCAGTGCCAGCGGCGGCGGTAACGGCGGCCTCCGCGGCTTTGGTGACGGC GGTATTGGCGGTGGCTACGAGGCAGCTGCGCGGGCGGCGGTCGGGACGAC ATTTAGAGGCAGGGGAGGAGGTGGCGGGATGGCGGATGGCGGCGCTGGAG GGGGCGGCGGCCGGTTGCTGGCAGAGCGCCGGGCGGTCGCAGCGGTGCGT TGCATGTCCCCAGCGGCCGCGTCGCTGCGGGCGCGGGCGGTGCTCACCCT CGTGCACGCCGCGTCGTGCCCCTGTTCCCCCGAGCTCTGGAGCCTCGCTC GCGAGGCCGCCGGCTGGGGCAGCAGCGGCGGCAGCGGCGCCTACGGCGGC GCATGCGGCGTTGGTCCGGCCGCCGAAGAGCTGGCGGAGGCGGCGCGGGC GCTCGCGCTGGCGGACGTGGTGCGGCGGCACCGCGTCGACGGCTTTGACC CGGTGGACCCGGCGCACGCGTCGCAGCTGCTAGAGCACGTGGCGTCGCGC GTTGGCTGCGCCGCGGCGCTCGAGGACGCGCTGCAGGTGGCGGCCTGCTA CCGCCACCTGGACGAGCGCCGCGCCTACGTGGAATTCCTGCAGAACTTGG CCATGACACCGCCACCGCCATCGTTGGCATCTGTGGCATCGGCGACAGAA TCGATCGAGGAGGCTTTGGTTGCTGCCGTGGCCGAGGCCGGAACCGTGAC AGCTGGAACTGGCGAGCCGGCGGTGCGAGGCGGCGCATGGGAGGCGCGGC TGTGCCGGCAGGCGGCACGCGTCGAAGGGGTGCTGCGCAGCATCGCCGAC CGGCGGCTGCTGCGCGACGTGGCGCAGGAGGCGCTCCTCTTCTGTGTGCG CACCCTCGAGGACATCGAGATGGACGCCGTCGAGGAGGGCCTCCCGCCAG GCCGCCTCATGGCCGCCGGCGCCACTGCCGCCGCCACCACCACCAACGGC GGTGGCAACGGGGATGATGCGATAGTGGCGGAAGAGGAAGAGAATCAGCA GGACCGGACGCAGGAGGCGCAATGCGCCGCGGTTGCCGCGAGCGTCCTGG CGGCAGTGCTACACGAGACTGAGTGGCAGGCGCCATCGGAAGAGGTGGCA GCACCGCCATTCGGCGCAGCGTCGGCGGCGGCAGGGTGGCGAGTGCCGCG GCTGCACGTTGACGCAGCGGCGCTCGTGTCGGACCTGCGGCGGCTGCGGA GCCTCCAGTCGGAGTTCGGCCTCTTTCCGTCGCTGATGACACTCCGAGGA AACCCCGAGGCGTGCTGGCGCATGTTGCGCGCCCTAATGGCGGCGCAGGC GAACGCCGCAGAGGCAGCGGCGGCGGCCAAGGCTGCGGCGGCGAAGTCTG CCGCGGCGAGCATGGCAGCGGTGGGGGCGGCGAGACACTCGCCGTCTACT GAGGCGGAGCGTCGCGACAGCGCTGGCGCGGGAGCAAGCGCTGCCGGCGG GAGCCAGGCGCTGTTGAAGCAAGGCGGAGGCGGCGGTATGGGACCGAACT TCCACTCGCGGCGCAAAAAGTGCGCACGTGCTGCCAGAAGCAGCGGTGGC GCAGGTGACAATGGCAGTGGAAGCAGCGGCAGCGGCAGTCGGGGGACTGC CGACGGCGACGCCCAGGAAGAGGAGGTGCTGCATGCTCTCCTGCGACGCA CGCGGCGGCCGGCCGAGCTGCTGGGCGTGCCGCTGGACCGCGTCGTGGCG CACGCTGCGGCCGAGGCAGCCCGCCAGGGCCGCGTCGGGGAGGTTTTGGC GCTCTGCCGCGGCCTACTAGACACGCGCATCCCGATGGAGCGCGGCACAG TCGCCGCGGCGCTACGGGACGTCGCCCTCACGCTGTCGGGCCTTGTGGCG GCCGGCACGGCGGCGGCAGCGAAGGAGCGGCGGCGGGGTGGCGGTGGCAG CGGCGGCATTGGTGGGGGCAGCGGGGGGGACGGCGACGGTGGGCCGGACG AGACGAGCGTGCAGCAGTTCCTGCAGGCGACGGCGGCGTCGCTGCGGGCG CTGCGGCGCTCCACATTACTCTGCGACGGCAGCGGCCTGCCGCGGGTCGC TGACTTCATGCAAGGGACGGAGCTCGTGGCCGCCGTGCTAGCGCGCAGCG GCGGCGGCGAGGGCCTTATGCCGCTGGTCCGCGGCGATAGCGACGGCTTT GGTGGCAGAGCTGCATTTGGCCGCCGCAATGGAGGCGGCGCTGCTGGTGA CCGTGGCGGCCGCAGCGGTGCCCATTTCGGTGCCGATTCCCGGGCGGCCG CAGAAGCCGGTGGAGACGGCGCAGAAAACGGCCAGGGCGGGATATTCGGC GGGGAGACTCTGCATTCGTGGGCGCGGGGTGGAGGGTTGGTTCTGCCGTT GGGCGAGGCGTTGGCCGCCGTCGGCAAGTTTGCCTTCCTCGAGCTGCAAT GCCGGCTGGCCAACGCGGCCGCGGCAGCAGAAGCGGCTGCCCTCGGCAAC GGCGACGGCGGCGGCGGTGGCTGTGGCAGCCGAGCGCACGGCTCGGCCGG GAACGAGAACAGTGGGAAAAGCACGGCGTTGGCGACGGCGGCTGCGACAG GGATGGCGGCGGCGCTGGCGGACGCCGCCGACCGCCTCGCCGAGGTGCTG TCGGCTCACGGCGCCCACCAGTTGTGCCTGCGCGCGCTGGCCGGCATGGC AGCGCCAGCGCCGGCCGCCGCCGCAGCGCTCGAGGCGGCCCTGGCGGCGG CGGCGGCGCGCGTCCTGGCGTTCCGCCCGCTCGACGACGCGCTCGGCACG GGCTACCTGCTGGCGCTGCCCATCAAGGCCGCCTTCGAAGTCTTCCGCCG CGCCATCCCGGCGGCGAGTTCCGACTTCGGCCGGCTCAGCGCGCTGGCCT GCGTCGGCGTCGGTGCGGCGGGCATGTGGGGCCACCACGAGCTGCTGGCG CAATGCCGCGACCTGGAGCGGAACGCGCATTGGTGGCGGGTCCTGTCAGC GCTCGGCGTCCGGTTCGACCACCGCGGCTTCCGGCAAGACGGGGCATCGG CGGGCGGCGGCGGCGGCAGCGGCAGCGGCTTGACGGGCGGCGGCTCAGCG GCGGCGGCGGCGGGGCGCGGCGAGTATCAGAAGACGCTGGTGGGGCCACT GCTGGAGCAGTCGGGGGGCGATTTGCAGCTGGCACTCGAGTTCTGCGACC ACTACCACATACCCGACGCCTTCCCGTGTCTTCTCTATGCCGAGCGAGAG CTGTCGCCGCCGGCGGCGGGTGCAGCGGCTACGAAAACTGATGTGGAGGG CTATCGGGTGAGTGGATCTGCTTTGTCTGTGTTAAACTTTCTCCTGCCGA ATTGTGGCATGTGCAACGCACATCGAACCTCTAGACGCCGAGCTTTATGC GATGCCTTTTCTGATTCCTGTGTACAGCTAGCACCATTGCATTTTATTTC TGCGATCTTCATTCAGTTCATGCGCAAAGTTTGGACCGATTATCGTCCCC AATTATCGTCCTTAATCGCTTCATCTCCGCAGGAACGCGTCATGGCGGTG TTGCCGGACATTCACGGCCACCAGCTGGTGGCTCTCCTGCGGCACCTCCT CAGCCCTGCCGCCCGTCGCGTCGCTGGCACGGACCATGAGCGGCTCGTCT TCCTCTTTGAGCTCCTCGCCACCCGCCTCGAGCTCGACGCCAACGAAAAC GGTGGCAGCAGCGGGAGCGGCAGTGCCGGCAGCGGCAGCAGCGGCGCCAG CAGCGGCAACAGTGGCGACGGCAGCGGCCTGGCGGGTACCGCTGCAGAGT GTGACCGCAGCCTGGCGGTGCTGCGCGTCCTGCGCAGCTATCGGGGCGTC CGCACGGCTCCCGGTGCGATCGCCAACGGTGACTCCAGCGACGACAGCGG GCGGCTGTGCTTCTGGGCGGTGCGCGCGGACCCGTGGGCAGTGCTGCAGC CGGAGCTGAACGCGGACACTATCCTCAAGCTCATTCCGCTGGCGGGACCG CTGGGCGTAGAGCCCTCCGAGTTCTACAGCCGCCTCGTCGTACAGCTTTT CTGCGGATGCGGCGGCGGCGGCATTGGCGGGGGTGCTGGCGCTGGGGATG GTGGCATTACCATAGTCATGCCGCCAGTCGCCGAGGTGCGACATTGGCTT GGGGAGATTCGGAGCCTGGCCCTTGCGTGCGTCACGGCGCAGTGGACGGC T
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1107:1740..6440+

>mRNA_P-wetherbeei_contig1107.2.1 ID=mRNA_P-wetherbeei_contig1107.2.1|Name=mRNA_P-wetherbeei_contig1107.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=4122bp|location=Sequence derived from alignment at P-wetherbeei_contig1107:1740..6440+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGGCGCGCCGCCGCTGGCCGCACGACGCGCTCCGCGTCGCGCGCGC
CGTCTCGGAGGCATCGCTCACCGTCCTCGGGCCGGCCGGTGCCGTCCGGA
CCCCGGCGGCGGCGCTGGCGGCGGCGGCGGCCCTGCCGCCGGCAGGAACC
GCCATCGGCGGCGGCAGCAATTGCAATGGCTGGGGCCATGACCCGCTGGA
AGCACTGACGGCGGCGCTGGAAGACCTGGTAGACGCGTGGGACGCGCACG
GGCTGTGCGTCGGGCTGCACGAATGGGAGCGGCTGGGCGCGGCGGGCATG
GCGCTCCTGCCGCTGCGGCGGGTGCATGATCCGGCACTGCTGCCGCTGGA
GGTGTCGCACCACGTCCGCCCGCTGGCGCACCGCCACGGCCTCGATGCTG
ACGCACTGCTGCTGGACTTTGTTCTCGCCAGCTGCTCTGGCTGGCACACT
GCTGCGCGGGCGGCGGTCGGGACGACATTTAGAGGCAGGGGAGGAGGTGG
CGGGATGGCGGATGGCGGCGCTGGAGGGGGCGGCGGCCGGTTGCTGGCAG
AGCGCCGGGCGGTCGCAGCGGTGCGTTGCATGTCCCCAGCGGCCGCGTCG
CTGCGGGCGCGGGCGGTGCTCACCCTCGTGCACGCCGCGTCGTGCCCCTG
TTCCCCCGAGCTCTGGAGCCTCGCTCGCGAGGCCGCCGGCTGGGGCAGCA
GCGGCGGCAGCGGCGCCTACGGCGGCGCATGCGGCGTTGGTCCGGCCGCC
GAAGAGCTGGCGGAGGCGGCGCGGGCGCTCGCGCTGGCGGACGTGGTGCG
GCGGCACCGCGTCGACGGCTTTGACCCGGTGGACCCGGCGCACGCGTCGC
AGCTGCTAGAGCACGTGGCGTCGCGCGTTGGCTGCGCCGCGGCGCTCGAG
GACGCGCTGCAGGTGGCGGCCTGCTACCGCCACCTGGACGAGCGCCGCGC
CTACGTGGAATTCCTGCAGAACTTGGCCATGACACCGCCACCGCCATCGT
TGGCATCTGTGGCATCGGCGACAGAATCGATCGAGGAGGCTTTGGTTGCT
GCCGTGGCCGAGGCCGGAACCGTGACAGCTGGAACTGGCGAGCCGGCGGT
GCGAGGCGGCGCATGGGAGGCGCGGCTGTGCCGGCAGGCGGCACGCGTCG
AAGGGGTGCTGCGCAGCATCGCCGACCGGCGGCTGCTGCGCGACGTGGCG
CAGGAGGCGCTCCTCTTCTGTGTGCGCACCCTCGAGGACATCGAGATGGA
CGCCGTCGAGGAGGGCCTCCCGCCAGGCCGCCTCATGGCCGCCGGCGCCA
CTGCCGCCGCCACCACCACCAACGGCGGTGGCAACGGGGATGATGCGATA
GTGGCGGAAGAGGAAGAGAATCAGCAGGACCGGACGCAGGAGGCGCAATG
CGCCGCGGTTGCCGCGAGCGTCCTGGCGGCAGTGCTACACGAGACTGAGT
GGCAGGCGCCATCGGAAGAGGTGGCAGCACCGCCATTCGGCGCAGCGTCG
GCGGCGGCAGGGTGGCGAGTGCCGCGGCTGCACGTTGACGCAGCGGCGCT
CGTGTCGGACCTGCGGCGGCTGCGGAGCCTCCAGTCGGAGTTCGGCCTCT
TTCCGTCGCTGATGACACTCCGAGGAAACCCCGAGGCGTGCTGGCGCATC
GCTGCCGGCGGGAGCCAGGCGCTGTTGAAGCAAGGCGGAGGCGGCGGTAT
GGGACCGAACTTCCACTCGCGGCGCAAAAAGTGCGCACGTGCTGCCAGAA
GCAGCGGTGGCGCAGGTGACAATGGCAGTGGAAGCAGCGGCAGCGGCAGT
CGGGGGACTGCCGACGGCGACGCCCAGGAAGAGGAGGTGCTGCATGCTCT
CCTGCGACGCACGCGGCGGCCGGCCGAGCTGCTGGGCGTGCCGCTGGACC
GCGTCGTGGCGCACGCTGCGGCCGAGGCAGCCCGCCAGGGCCGCGTCGGG
GAGGTTTTGGCGCTCTGCCGCGGCCTACTAGACACGCGCATCCCGATGGA
GCGCGGCACAGTCGCCGCGGCGCTACGGGACGTCGCCCTCACGCTGTCGG
GCCTTGTGGCGGCCGGCACGGCGGCGGCAGCGAAGGAGCGGCGGCGGGGT
GGCGGTGGCAGCGGCGGCATTGGTGGGGGCAGCGGGGGGGACGGCGACGG
TGGGCCGGACGAGACGAGCGTGCAGCAGTTCCTGCAGGCGACGGCGGCGT
CGCTGCGGGCGCTGCGGCGCTCCACATTACTCTGCGACGGCAGCGGCCTG
CCGCGGGTCGCTGACTTCATGCAAGGGACGGAGCTCGTGGCCGCCGTGCT
AGCGCGCAGCGGCGGCGGCGAGGGCCTTATGCCGCTGGTCCGCGGCGATA
GCGACGGCTTTGGTGGCAGAGCTGCATTTGGCCGCCGCAATGGAGGCGGC
GCTGCTGGTGACCGTGGCGGCCGCAGCGGTGCCCATTTCGGTGCCGATTC
CCGGGCGGCCGCAGAAGCCGGTGGAGACGGCGCAGAAAACGGCCAGGGCG
GGATATTCGGCGGGGAGACTCTGCATTCGTGGGCGCGGGGTGGAGGGTTG
GTTCTGCCGTTGGGCGAGGCGTTGGCCGCCGTCGGCAAGTTTGCCTTCCT
CGAGCTGCAATGCCGGCTGGCCAACGCGGCCGCGGCAGCAGAAGCGGCTG
CCCTCGGCAACGGCGACGGCGGCGGCGGTGGCTGTGGCAGCCGAGCGCAC
GGCTCGGCCGGGAACGAGAACAGTGGGAAAAGCACGGCGTTGGCGACGGC
GGCTGCGACAGGGATGGCGGCGGCGCTGGCGGACGCCGCCGACCGCCTCG
CCGAGGTGCTGTCGGCTCACGGCGCCCACCAGTTGTGCCTGCGCGCGCTG
GCCGGCATGGCAGCGCCAGCGCCGGCCGCCGCCGCAGCGCTCGAGGCGGC
CCTGGCGGCGGCGGCGGCGCGCGTCCTGGCGTTCCGCCCGCTCGACGACG
CGCTCGGCACGGGCTACCTGCTGGCGCTGCCCATCAAGGCCGCCTTCGAA
GTCTTCCGCCGCGCCATCCCGGCGGCGAGTTCCGACTTCGGCCGGCTCAG
CGCGCTGGCCTGCGTCGGCGTCGGTGCGGCGGGCATGTGGGGCCACCACG
AGCTGCTGGCGCAATGCCGCGACCTGGAGCGGAACGCGCATTGGTGGCGG
GTCCTGTCAGCGCTCGGCGTCCGGTTCGACCACCGCGGCTTCCGGCAAGA
CGGGGCATCGGCGGGCGGCGGCGGCGGCAGCGGCAGCGGCTTGACGGGCG
GCGGCTCAGCGGCGGCGGCGGCGGGGCGCGGCGAGTATCAGAAGACGCTG
GTGGGGCCACTGCTGGAGCAGTCGGGGGGCGATTTGCAGCTGGCACTCGA
GTTCTGCGACCACTACCACATACCCGACGCCTTCCCGTGTCTTCTCTATG
CCGAGCGAGAGCTGTCGCCGCCGGCGGCGGGTGCAGCGGCTACGAAAACT
GATGAACGCGTCATGGCGGTGTTGCCGGACATTCACGGCCACCAGCTGGT
GGCTCTCCTGCGGCACCTCCTCAGCCCTGCCGCCCGTCGCGTCGCTGGCA
CGGACCATGAGCGGCTCGTCTTCCTCTTTGAGCTCCTCGCCACCCGCCTC
GAGCTCGACGCCAACGAAAACGGTGGCAGCAGCGGGAGCGGCAGTGCCGG
CAGCGGCAGCAGCGGCGCCAGCAGCGGCAACAGTGGCGACGGCAGCGGCC
TGGCGGGTACCGCTGCAGAGTGTGACCGCAGCCTGGCGGTGCTGCGCGTC
CTGCGCAGCTATCGGGGCGTCCGCACGGCTCCCGGTGCGATCGCCAACGG
TGACTCCAGCGACGACAGCGGGCGGCTGTGCTTCTGGGCGGTGCGCGCGG
ACCCGTGGGCAGTGCTGCAGCCGGAGCTGAACGCGGACACTATCCTCAAG
CTCATTCCGCTGGCGGGACCGCTGGGCGTAGAGCCCTCCGAGTTCTACAG
CCGCCTCGTCGTACAGCTTTTCTGCGGATGCGGCGGCGGCGGCATTGGCG
GGGGTGCTGGCGCTGGGGATGGTGGCATTACCATAGTCATGCCGCCAGTC
GCCGAGGTGCGACATTGGCTTGGGGAGATTCGGAGCCTGGCCCTTGCGTG
CGTCACGGCGCAGTGGACGGCT
back to top