mRNA_P-wetherbeei_contig11066.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11066.2.1
Unique NamemRNA_P-wetherbeei_contig11066.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11066.2.1 vs. uniprot
Match: A0A1F7PJ23_9BACT (MaoC-like domain-containing protein n=1 Tax=Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22 TaxID=1802110 RepID=A0A1F7PJ23_9BACT)

HSP 1 Score: 166 bits (419), Expect = 5.410e-50
Identity = 81/145 (55.86%), Postives = 106/145 (73.10%), Query Frame = 1
Query:    1 QYWFEDFTPGRRFAGPPHAMDDAAFQGFSKLTGDAHPLHYDAEYAKKTVFGAPLAHGLLLMSVTALGATPLSDNVEDSMIAFLEQGGKFVKPVLLGDTVTPVMQVEEARETRNPAHGVVKFAVSLTNQRGEVVLSGFHTYLIKRR 435
            Q +F+DF  G RF  P   + DAAF  F+ +TGD HP+HYD EYA++T FGA +AHGLL+ S+TA+GA+PLS  +E+SM+AF+EQG +F++PVLLGDTV P  +V      R  A G+++ AV +TNQRGEVVL G H YLIK R
Sbjct:    6 QLYFDDFKLGERFRSPARTLGDAAFLFFAGITGDNHPIHYDEEYARRTRFGARVAHGLLVTSMTAVGASPLSHRLEESMVAFVEQGSRFLRPVLLGDTVHPEFEVVGLE--RKGARGLLRLAVRVTNQRGEVVLEGHHAYLIKCR 148          
BLAST of mRNA_P-wetherbeei_contig11066.2.1 vs. uniprot
Match: A0A2V6Q2H5_9BACT (Dehydratase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6Q2H5_9BACT)

HSP 1 Score: 157 bits (397), Expect = 1.390e-46
Identity = 78/143 (54.55%), Postives = 102/143 (71.33%), Query Frame = 1
Query:    7 WFEDFTPGRRFAGPPHAMDDAAFQGFSKLTGDAHPLHYDAEYAKKTVFGAPLAHGLLLMSVTALGATPLSDNVEDSMIAFLEQGGKFVKPVLLGDTVTPVMQVEEARETRNPAHGVVKFAVSLTNQRGEVVLSGFHTYLIKRR 435
            +F+D   G R+  P   M+DA F  F+ L+GD +PLHYD EYAKKT FGA LAHGLL M +TA+GA+PLS  + +SMIAFLEQG +F++PVL+GDT+ P  +V E +  R    G+VK A  + NQRGE+VL GFH YL++ R
Sbjct:    6 YFDDLKIGDRWQSPSRTMNDAYFAFFAGLSGDNNPLHYDDEYAKKTPFGARLAHGLLTMGMTAVGASPLSHRLHESMIAFLEQGCRFLRPVLVGDTIYPEHEVVELQ--RKGERGIVKLAARIKNQRGEIVLDGFHVYLLRCR 146          
BLAST of mRNA_P-wetherbeei_contig11066.2.1 vs. uniprot
Match: UPI0019B87AE0 (MaoC family dehydratase N-terminal domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019B87AE0)

HSP 1 Score: 156 bits (395), Expect = 3.070e-46
Identity = 76/147 (51.70%), Postives = 98/147 (66.67%), Query Frame = 1
Query:    1 QYWFEDFTPGRRFAGPPHAMDDAAFQGFSKLTGDAHPLHYDAEYAKKTVFGAPLAHGLLLMSVTALGATPLSDNVEDSMIAFLEQGGKFVKPVLLGDTVTPVMQVEEARETRNPAHGVVKFAVSLTNQRGEVVLSGFHTYLIKRRPA 441
            Q WFEDF  G RF G    +D   F+ F+ LTGD HP+HYD +YA  T FGAP+AHGLL+  + ALGATPLS  ++ SMIAF+EQ  +FV PVL G +V+   +V   R  R+   G+V+F V++ NQ G +V  GFHTYL+  RPA
Sbjct:    6 QRWFEDFRVGDRFVGQTRCLDVDTFRAFAALTGDTHPIHYDPQYAAATRFGAPVAHGLLIAGMCALGATPLSAQLQQSMIAFVEQSLRFVAPVLEGHSVSTEFEVASTRLARDARRGLVRFEVNVFNQAGVLVAEGFHTYLLGCRPA 152          
BLAST of mRNA_P-wetherbeei_contig11066.2.1 vs. uniprot
Match: A0A8J3EB20_9PROT (MaoC-like domain-containing protein n=1 Tax=Caldovatus sediminis TaxID=2041189 RepID=A0A8J3EB20_9PROT)

HSP 1 Score: 154 bits (389), Expect = 2.350e-45
Identity = 76/147 (51.70%), Postives = 94/147 (63.95%), Query Frame = 1
Query:    1 QYWFEDFTPGRRFAGPPHAMDDAAFQGFSKLTGDAHPLHYDAEYAKKTVFGAPLAHGLLLMSVTALGATPLSDNVEDSMIAFLEQGGKFVKPVLLGDTVTPVMQVEEARETRNPAHGVVKFAVSLTNQRGEVVLSGFHTYLIKRRPA 441
            Q WFEDF PG+ F G   A     F  F+++TGDAHP+HYDA YA  T FG PLAHGLL+   +ALGATPLS  +E+SM+A LE   +F +PV  GD +T   +V E R       GVV+F V LTN +GE V+ G H YLI+ R A
Sbjct:    7 QLWFEDFAPGQSFPGATSACTAEDFLAFARITGDAHPIHYDAAYAAGTRFGRPLAHGLLVAGYSALGATPLSRRLEESMVAMLEVAFRFRRPVFAGDVLTSHFEVAETRRDPGKDSGVVRFHVRLTNAKGETVMEGSHAYLIRARGA 153          
BLAST of mRNA_P-wetherbeei_contig11066.2.1 vs. uniprot
Match: A0A1Q7DG98_9BACT (MaoC-like domain-containing protein n=3 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A1Q7DG98_9BACT)

HSP 1 Score: 152 bits (384), Expect = 1.270e-44
Identity = 78/147 (53.06%), Postives = 100/147 (68.03%), Query Frame = 1
Query:    1 QYWFEDFTPGRRFAGPPHAMDDAAFQGFSKLTGDAHPLHYDAEYAKKTVFGAPLAHGLLLMSVTALGATPLSDNVEDSMIAFLEQGGKFVKPVLLGDTVTPVMQVEEARETRNPAHGVVKFAVSLTNQRGEVVLSGFHTYLIKRRPA 441
            Q +FEDF  G RF  P   + DA F  F+ +TGDAHP+HYD EYAKKT FG  LAHGLLL S+TA+GA+ L+  +E+S++AFL+Q  +FV P  +GDT+ P  +V      R+   G+V   V+LTNQRGE+VL G H YLI  RPA
Sbjct:    7 QLFFEDFGVGDRFGSPSRTLTDAHFMFFAGMTGDAHPIHYDDEYAKKTRFGRRLAHGLLLTSLTAVGASNLAPLIEESIVAFLDQSTRFVAPAFVGDTLKPDHEVIALERKRSA--GLVTLKVTLTNQRGELVLEGQHKYLIAYRPA 151          
BLAST of mRNA_P-wetherbeei_contig11066.2.1 vs. uniprot
Match: A0A1Q7EHF0_9BACT (MaoC-like domain-containing protein n=3 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A1Q7EHF0_9BACT)

HSP 1 Score: 152 bits (384), Expect = 1.270e-44
Identity = 77/147 (52.38%), Postives = 98/147 (66.67%), Query Frame = 1
Query:    1 QYWFEDFTPGRRFAGPPHAMDDAAFQGFSKLTGDAHPLHYDAEYAKKTVFGAPLAHGLLLMSVTALGATPLSDNVEDSMIAFLEQGGKFVKPVLLGDTVTPVMQVEEARETRNPAHGVVKFAVSLTNQRGEVVLSGFHTYLIKRRPA 441
            Q +FEDFT G RF  P   + DA F  F+ +TGDAHP+HYD EY +KT FG  LAHGLLL S+TA+GA+ L   +EDS++AF+EQ  +FV P  +GDT+ P  +V      R+   G+V   V+LTNQR E+VL G H YLI  RPA
Sbjct:    7 QLYFEDFTLGDRFRSPSKTLTDAHFLFFAGMTGDAHPIHYDDEYGRKTRFGQRLAHGLLLTSLTAVGASTLGPLIEDSIVAFVEQSSRFVAPAFIGDTILPEHEVTALERKRSA--GLVTLRVTLTNQRRELVLEGQHRYLIAYRPA 151          
BLAST of mRNA_P-wetherbeei_contig11066.2.1 vs. uniprot
Match: A0A2V6Q9D4_9BACT (Dehydratase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6Q9D4_9BACT)

HSP 1 Score: 150 bits (380), Expect = 1.320e-43
Identity = 80/147 (54.42%), Postives = 97/147 (65.99%), Query Frame = 1
Query:    1 QYWFEDFTPGRRFAGPPHAMDDAAFQGFSKLTGDAHPLHYDAEYAKKTVFGAPLAHGLLLMSVTALGATPLSDNVEDSMIAFLEQGGKFVKPVLLGDTVTPVMQVEEARETRNPAHGVVKFAVSLTNQRGEVVLSGFHTYLIKRRPA 441
            QY+FEDF  G RF  P   + DA F  FS LTGDAHPLHYD EYAK T FG PLAHGLLL S+TA+GA+ LS  +EDS++AFLEQ  +F  PV +GDT+ P  +V      R+   G++   V+LTNQ G  VL G H YL+  R A
Sbjct:   38 QYFFEDFKVGDRFESPSKTLTDAHFLFFSGLTGDAHPLHYDVEYAKSTRFGRPLAHGLLLTSLTAVGASTLSPLIEDSIVAFLEQTMRFRAPVFVGDTLKPRHEVIALERKRSA--GLLTLRVTLTNQGGATVLEGEHRYLVAYRRA 182          
BLAST of mRNA_P-wetherbeei_contig11066.2.1 vs. uniprot
Match: A0A2V6YK31_9BACT (MaoC-like domain-containing protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6YK31_9BACT)

HSP 1 Score: 153 bits (387), Expect = 1.430e-43
Identity = 80/147 (54.42%), Postives = 98/147 (66.67%), Query Frame = 1
Query:    1 QYWFEDFTPGRRFAGPPHAMDDAAFQGFSKLTGDAHPLHYDAEYAKKTVFGAPLAHGLLLMSVTALGATPLSDNVEDSMIAFLEQGGKFVKPVLLGDTVTPVMQVEEARETRNPAHGVVKFAVSLTNQRGEVVLSGFHTYLIKRRPA 441
            Q +FEDFT G RF  P   + DA F  F+ +TGDAHP+HYD EY KKT +G  LAHGLLL S+TA+GA+PLS  VEDS+IAF+EQ   F  P  +GDT+ P  +V      R+   G++   V+LTNQRGE VL G H YLI  RPA
Sbjct:  127 QRYFEDFTVGDRFRSPSKTLTDAHFLFFAGMTGDAHPIHYDEEYGKKTRYGRRLAHGLLLTSLTAVGASPLSPLVEDSIIAFVEQSAWFRAPAFIGDTMYPEHEVAGLERKRSA--GLLTLRVALTNQRGETVLEGEHKYLIAYRPA 271          
BLAST of mRNA_P-wetherbeei_contig11066.2.1 vs. uniprot
Match: A0A2V6YVZ4_9BACT (Dehydratase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6YVZ4_9BACT)

HSP 1 Score: 152 bits (383), Expect = 1.530e-43
Identity = 76/147 (51.70%), Postives = 100/147 (68.03%), Query Frame = 1
Query:    1 QYWFEDFTPGRRFAGPPHAMDDAAFQGFSKLTGDAHPLHYDAEYAKKTVFGAPLAHGLLLMSVTALGATPLSDNVEDSMIAFLEQGGKFVKPVLLGDTVTPVMQVEEARETRNPAHGVVKFAVSLTNQRGEVVLSGFHTYLIKRRPA 441
            Q +FEDFT G RF  P   + DA F  F+ +TGD HP+HYD EY KKT +G  LAHGLLL S+TA+GA+ L+ ++EDS++AF+EQ  +F  P L+GDT++P  +V      R+   G++   V+L NQRGEVVL G H YLI  RPA
Sbjct:   79 QRYFEDFTVGDRFKSPSRTLTDAHFMFFAGMTGDNHPIHYDEEYGKKTRYGGRLAHGLLLASLTAVGASTLAPSIEDSIVAFVEQTTRFRGPALIGDTISPEHEVVALERKRSA--GLLTLRVALKNQRGEVVLEGEHRYLIAYRPA 223          
BLAST of mRNA_P-wetherbeei_contig11066.2.1 vs. uniprot
Match: A0A7V3XJP4_9BACT (Dehydratase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A7V3XJP4_9BACT)

HSP 1 Score: 149 bits (375), Expect = 2.870e-43
Identity = 74/147 (50.34%), Postives = 96/147 (65.31%), Query Frame = 1
Query:    1 QYWFEDFTPGRRFAGPPHAMDDAAFQGFSKLTGDAHPLHYDAEYAKKTVFGAPLAHGLLLMSVTALGATPLSDNVEDSMIAFLEQGGKFVKPVLLGDTVTPVMQVEEARETRNPAHGVVKFAVSLTNQRGEVVLSGFHTYLIKRRPA 441
            Q WFEDF  G RF  P   + DA F  F+ +TGDAHP+HYD EY +KT FG  +AHGLLL S+TA+GA+ L+  +E S++AF+EQ  +F+ P  +GDT++P  +V      R    G+V    +LTNQRGE VL G H YLI  RPA
Sbjct:    6 QLWFEDFAVGDRFRSPSRTLTDAHFLFFAGMTGDAHPIHYDEEYGRKTRFGRRVAHGLLLTSLTAVGASTLAPLIEASIVAFVEQSTRFLAPAFIGDTLSPEHEVVALERKRTA--GLVTLRATLTNQRGETVLVGEHRYLIAYRPA 150          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11066.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F7PJ23_9BACT5.410e-5055.86MaoC-like domain-containing protein n=1 Tax=Candid... [more]
A0A2V6Q2H5_9BACT1.390e-4654.55Dehydratase n=1 Tax=Candidatus Rokubacteria bacter... [more]
UPI0019B87AE03.070e-4651.70MaoC family dehydratase N-terminal domain-containi... [more]
A0A8J3EB20_9PROT2.350e-4551.70MaoC-like domain-containing protein n=1 Tax=Caldov... [more]
A0A1Q7DG98_9BACT1.270e-4453.06MaoC-like domain-containing protein n=3 Tax=unclas... [more]
A0A1Q7EHF0_9BACT1.270e-4452.38MaoC-like domain-containing protein n=3 Tax=unclas... [more]
A0A2V6Q9D4_9BACT1.320e-4354.42Dehydratase n=1 Tax=Candidatus Rokubacteria bacter... [more]
A0A2V6YK31_9BACT1.430e-4354.42MaoC-like domain-containing protein n=1 Tax=Candid... [more]
A0A2V6YVZ4_9BACT1.530e-4351.70Dehydratase n=1 Tax=Candidatus Rokubacteria bacter... [more]
A0A7V3XJP4_9BACT2.870e-4350.34Dehydratase n=1 Tax=Candidatus Rokubacteria bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11066contigP-wetherbeei_contig11066:548..991 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1336243.JAEA01000010_gene3534
Preferred namephaJ
PFAMsMaoC_dehydratas
Model size444
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00831
KEGG koko:K17865
KEGG ReactionR03027
KEGG Pathwayko00630,ko00650,ko01120,ko01200,map00630,map00650,map01120,map01200
KEGG ModuleM00373
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003859,GO:0006081,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016043,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0022607,GO:0032787,GO:0042620,GO:0042621,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0046487,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901576
Exons1
Evalue2.74e-38
EggNOG OGsCOG2030@1|root,COG2030@2|Bacteria,1MWPK@1224|Proteobacteria,2U5CQ@28211|Alphaproteobacteria,1JTPQ@119045|Methylobacteriaceae
EC4.2.1.55
DescriptionPFAM MaoC domain protein dehydratase
Cds size444
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185895.8731067-CDS-P-wetherbeei_contig11066:547..9911683185895.8731067-CDS-P-wetherbeei_contig11066:547..991Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11066 548..991 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11066.2.1prot_P-wetherbeei_contig11066.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11066 548..991 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11066.2.1

>prot_P-wetherbeei_contig11066.2.1 ID=prot_P-wetherbeei_contig11066.2.1|Name=mRNA_P-wetherbeei_contig11066.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp
QYWFEDFTPGRRFAGPPHAMDDAAFQGFSKLTGDAHPLHYDAEYAKKTVF
GAPLAHGLLLMSVTALGATPLSDNVEDSMIAFLEQGGKFVKPVLLGDTVT
PVMQVEEARETRNPAHGVVKFAVSLTNQRGEVVLSGFHTYLIKRRPA*
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mRNA from alignment at P-wetherbeei_contig11066:548..991-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11066.2.1 ID=mRNA_P-wetherbeei_contig11066.2.1|Name=mRNA_P-wetherbeei_contig11066.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig11066:548..991- (Phaeothamnion wetherbeei SAG_119_79)
CAGTACTGGTTCGAGGATTTCACACCCGGACGGAGGTTCGCGGGGCCGCC GCACGCGATGGACGACGCGGCGTTCCAGGGGTTCTCCAAACTCACGGGCG ACGCCCACCCGCTGCACTACGATGCCGAATACGCGAAGAAGACCGTGTTC GGCGCGCCGCTGGCGCACGGCCTCCTGCTGATGTCGGTGACCGCGCTCGG CGCGACGCCGCTGTCGGACAACGTCGAGGACTCGATGATCGCCTTCCTGG AGCAGGGCGGGAAGTTCGTGAAGCCCGTGCTGCTGGGCGACACGGTCACG CCGGTCATGCAGGTCGAGGAAGCGCGCGAGACGCGCAACCCGGCCCATGG CGTGGTGAAATTCGCCGTGAGCCTCACCAACCAGCGCGGGGAAGTCGTAC TCTCGGGCTTCCACACCTACCTCATCAAGCGGCGGCCGGCATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11066:548..991-

>mRNA_P-wetherbeei_contig11066.2.1 ID=mRNA_P-wetherbeei_contig11066.2.1|Name=mRNA_P-wetherbeei_contig11066.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig11066:548..991- (Phaeothamnion wetherbeei SAG_119_79)
CAGTACTGGTTCGAGGATTTCACACCCGGACGGAGGTTCGCGGGGCCGCC
GCACGCGATGGACGACGCGGCGTTCCAGGGGTTCTCCAAACTCACGGGCG
ACGCCCACCCGCTGCACTACGATGCCGAATACGCGAAGAAGACCGTGTTC
GGCGCGCCGCTGGCGCACGGCCTCCTGCTGATGTCGGTGACCGCGCTCGG
CGCGACGCCGCTGTCGGACAACGTCGAGGACTCGATGATCGCCTTCCTGG
AGCAGGGCGGGAAGTTCGTGAAGCCCGTGCTGCTGGGCGACACGGTCACG
CCGGTCATGCAGGTCGAGGAAGCGCGCGAGACGCGCAACCCGGCCCATGG
CGTGGTGAAATTCGCCGTGAGCCTCACCAACCAGCGCGGGGAAGTCGTAC
TCTCGGGCTTCCACACCTACCTCATCAAGCGGCGGCCGGCATGA
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