mRNA_P-wetherbeei_contig11060.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11060.1.1
Unique NamemRNA_P-wetherbeei_contig11060.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig11060.1.1 vs. uniprot
Match: A0A835ZA90_9STRA (Pyrophosphate-dependent phosphofructokinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA90_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 9.050e-21
Identity = 42/57 (73.68%), Postives = 49/57 (85.96%), Query Frame = 1 
Query:    4 KALLRAGPRKKLHFEPTEVVAAVVTCGGLCPGLNSVIYHLTTTLFRNYSAKAVWGIR 174
            KALLRAGPR  LHF+P + VAA+VTCGGLCPGLNSVI+HLT TL +NYSA+ V G+R
Sbjct:  136 KALLRAGPRPLLHFDPQKTVAAIVTCGGLCPGLNSVIHHLTETLVKNYSAQRVIGVR 192
[Close]
BLAST of mRNA_P-wetherbeei_contig11060.1.1 vs. uniprot
Match: H6WB78_VAULI (Pyrophosphate-dependant phosphofructokinase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB78_VAULI)

HSP 1 Score: 92.4 bits (228), Expect = 1.640e-20
Identity = 43/57 (75.44%), Postives = 46/57 (80.70%), Query Frame = 1 
Query:    4 KALLRAGPRKKLHFEPTEVVAAVVTCGGLCPGLNSVIYHLTTTLFRNYSAKAVWGIR 174
            +A LRAGPR  LHFEP   VAA+VTCGGLCPGLNSVI+HLT TL RNY AK V GIR
Sbjct:  117 QAFLRAGPRPVLHFEPKNTVAAIVTCGGLCPGLNSVIHHLTETLVRNYKAKRVIGIR 173
[Close]
BLAST of mRNA_P-wetherbeei_contig11060.1.1 vs. uniprot
Match: D7G165_ECTSI (Pyrophosphate-dependent phosphofructose kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G165_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 4.000e-19
Identity = 41/56 (73.21%), Postives = 45/56 (80.36%), Query Frame = 1 
Query:    4 KALLRAGPRKKLHFEPTEVVAAVVTCGGLCPGLNSVIYHLTTTLFRNYSAKAVWGI 171
            K  LRAGPR  LHF+PTEV AAVVTCGGLCPGLNSVI+HL  TLF  Y A+ V+GI
Sbjct:  243 KGFLRAGPRASLHFKPTEVRAAVVTCGGLCPGLNSVIHHLVLTLFNIYDAEKVFGI 298
[Close]
BLAST of mRNA_P-wetherbeei_contig11060.1.1 vs. uniprot
Match: A0A836C7Q7_9STRA (Pyrophosphate-dependent phosphofructokinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Q7_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 4.840e-19
Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = 1 
Query:    4 KALLRAGPRKKLHFEPTEVVAAVVTCGGLCPGLNSVIYHLTTTLFRNYSAKAVWGIR 174
            KALLRAGPR  LHF P E VAA+VTCGGLCPGLNSVI+++T TL +NY A+ V GI+
Sbjct:   74 KALLRAGPRPLLHFPPKETVAAIVTCGGLCPGLNSVIHYVTETLLQNYGARRVIGIK 130
[Close]
BLAST of mRNA_P-wetherbeei_contig11060.1.1 vs. uniprot
Match: A0A7S3M864_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M864_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 8.600e-19
Identity = 41/56 (73.21%), Postives = 45/56 (80.36%), Query Frame = 1 
Query:    7 ALLRAGPRKKLHFEPTEVVAAVVTCGGLCPGLNSVIYHLTTTLFRNYSAKAVWGIR 174
            A LRAGPR  LHFEPT+V AAVVTCGGLCPGLNSVI  L  +L+ NY A+AV GIR
Sbjct:  138 AFLRAGPRAVLHFEPTKVRAAVVTCGGLCPGLNSVIRELVHSLYYNYGAEAVIGIR 193
[Close]
BLAST of mRNA_P-wetherbeei_contig11060.1.1 vs. uniprot
Match: A0A7S1UJ52_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ52_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.330e-18
Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 1 
Query:    1 TKALLRAGPRKKLHFEPTEVVAAVVTCGGLCPGLNSVIYHLTTTLFRNYSAKAVWGIR 174
            +KAL RAGPR +LHFEP  V AAV+TCGGLCPGLN V++H+  TL  NY  K ++GIR
Sbjct:   71 SKALARAGPRAELHFEPDRVRAAVITCGGLCPGLNDVVHHIVNTLHDNYGVKTIFGIR 128
[Close]
BLAST of mRNA_P-wetherbeei_contig11060.1.1 vs. uniprot
Match: A0A6H5KDC4_9PHAE (PFK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC4_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.660e-18
Identity = 40/56 (71.43%), Postives = 44/56 (78.57%), Query Frame = 1 
Query:    4 KALLRAGPRKKLHFEPTEVVAAVVTCGGLCPGLNSVIYHLTTTLFRNYSAKAVWGI 171
            K  LRAGPR  LHF+P EV AAVVTCGGLCPGLNSVI+HL  TLF  Y A+ V+GI
Sbjct:  280 KGFLRAGPRASLHFKPEEVRAAVVTCGGLCPGLNSVIHHLVLTLFNIYGAEKVFGI 335
[Close]
BLAST of mRNA_P-wetherbeei_contig11060.1.1 vs. uniprot
Match: A0A6H5K8I7_9PHAE (PFK domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8I7_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.050e-18
Identity = 38/57 (66.67%), Postives = 44/57 (77.19%), Query Frame = 1 
Query:    4 KALLRAGPRKKLHFEPTEVVAAVVTCGGLCPGLNSVIYHLTTTLFRNYSAKAVWGIR 174
            KA LRAGPR +LHF PTEV  A+VTCGGLCPGLNSV++HL  T+   Y A  V+GIR
Sbjct:   60 KAFLRAGPRPELHFNPTEVRGAIVTCGGLCPGLNSVVHHLVETMLVTYKADKVFGIR 116
[Close]
BLAST of mRNA_P-wetherbeei_contig11060.1.1 vs. uniprot
Match: A0A7S0YX70_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YX70_9CRYP)

HSP 1 Score: 82.0 bits (201), Expect = 5.020e-18
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 1 
Query:    1 TKALLRAGPRKKLHFEPTEVVAAVVTCGGLCPGLNSVIYHLTTTLFRNYSAKAVWGI 171
            T+  LRAGPR+++ F+P +V+AA+VTCGGLCPGLN+VI  +T TL   Y A+ VWGI
Sbjct:  109 TRQWLRAGPRREIRFKPEKVIAAIVTCGGLCPGLNNVIREVTMTLLHTYKARKVWGI 165
[Close]
BLAST of mRNA_P-wetherbeei_contig11060.1.1 vs. uniprot
Match: A0A7S0PJW2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PJW2_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 6.680e-18
Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 1 
Query:    1 TKALLRAGPRKKLHFEPTEVVAAVVTCGGLCPGLNSVIYHLTTTLFRNYSAKAVWGIR 174
            +KA +RAGPR+KLHF P EV AA+VTCGGLCPGLN+V+  LT TL   Y A  V+GIR
Sbjct:  168 SKAFIRAGPREKLHFNPDEVNAAIVTCGGLCPGLNNVVRELTNTLINLYGADTVYGIR 225
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11060.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZA90_9STRA9.050e-2173.68Pyrophosphate-dependent phosphofructokinase n=1 Ta... [more]
H6WB78_VAULI1.640e-2075.44Pyrophosphate-dependant phosphofructokinase n=1 Ta... [more]
D7G165_ECTSI4.000e-1973.21Pyrophosphate-dependent phosphofructose kinase n=1... [more]
A0A836C7Q7_9STRA4.840e-1970.18Pyrophosphate-dependent phosphofructokinase n=1 Ta... [more]
A0A7S3M864_9STRA8.600e-1973.21Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S1UJ52_9STRA1.330e-1863.79Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6H5KDC4_9PHAE2.660e-1871.43PFK domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K8I7_9PHAE3.050e-1866.67PFK domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S0YX70_9CRYP5.020e-1859.65Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0PJW2_9STRA6.680e-1865.52Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11060contigP-wetherbeei_contig11060:147..323 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G165
Preferred namepfk
PFAMsPFK
Model size177
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00017
KEGG koko:K00850,ko:K01412
KEGG ReactionR00756,R03236,R03237,R03238,R03239,R04779
KEGG Pathwayko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230
KEGG ModuleM00001,M00345
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000166,GO:0003674,GO:0003824,GO:0003872,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008443,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009507,GO:0009536,GO:0009653,GO:0009888,GO:0009987,GO:0010015,GO:0010053,GO:0016020,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0020015,GO:0022622,GO:0030154,GO:0030554,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0042579,GO:0042866,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0048364,GO:0048731,GO:0048856,GO:0048869,GO:0051186,GO:0051188,GO:0055086,GO:0061615,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0090558,GO:0090627,GO:0097159,GO:0097367,GO:0099402,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1905392
Exons1
Evalue6.56e-20
EggNOG OGsCOG0205@1|root,KOG2440@2759|Eukaryota
Ec32 ortholog descriptionPhosphofructokinase
Ec32 orthologEc-12_002540.1
EC2.7.1.11,3.4.24.64
Description6-phosphofructokinase activity
Cds size177
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko01009,ko03019,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185895.7033875-CDS-P-wetherbeei_contig11060:146..3231683185895.7033875-CDS-P-wetherbeei_contig11060:146..323Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11060 147..323 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11060.1.1prot_P-wetherbeei_contig11060.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11060 147..323 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11060.1.1

>prot_P-wetherbeei_contig11060.1.1 ID=prot_P-wetherbeei_contig11060.1.1|Name=mRNA_P-wetherbeei_contig11060.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=59bp
TKALLRAGPRKKLHFEPTEVVAAVVTCGGLCPGLNSVIYHLTTTLFRNYS
AKAVWGIR*
back to top

mRNA from alignment at P-wetherbeei_contig11060:147..323+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11060.1.1 ID=mRNA_P-wetherbeei_contig11060.1.1|Name=mRNA_P-wetherbeei_contig11060.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=177bp|location=Sequence derived from alignment at P-wetherbeei_contig11060:147..323+ (Phaeothamnion wetherbeei SAG_119_79)
ACCAAGGCGCTGCTGCGCGCCGGGCCGCGGAAGAAGCTACACTTTGAGCC
GACAGAGGTAGTGGCGGCAGTGGTGACGTGTGGCGGGCTGTGCCCGGGCC
TCAACAGTGTCATCTACCACCTCACCACCACCCTCTTCCGCAACTACAGC
GCCAAGGCTGTCTGGGGCATCCGGTAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig11060:147..323+

>mRNA_P-wetherbeei_contig11060.1.1 ID=mRNA_P-wetherbeei_contig11060.1.1|Name=mRNA_P-wetherbeei_contig11060.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=177bp|location=Sequence derived from alignment at P-wetherbeei_contig11060:147..323+ (Phaeothamnion wetherbeei SAG_119_79)
ACCAAGGCGCTGCTGCGCGCCGGGCCGCGGAAGAAGCTACACTTTGAGCC
GACAGAGGTAGTGGCGGCAGTGGTGACGTGTGGCGGGCTGTGCCCGGGCC
TCAACAGTGTCATCTACCACCTCACCACCACCCTCTTCCGCAACTACAGC
GCCAAGGCTGTCTGGGGCATCCGGTAA
back to top