mRNA_P-wetherbeei_contig11022.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11022.1.1 vs. uniprot
Match: A0A6N7H5G8_9HYPH (Transposase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7H5G8_9HYPH) HSP 1 Score: 71.2 bits (173), Expect = 3.700e-13 Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 19 EVRRKLCSRRRKGLSHIKRSQAVQTFWAMHIEAMVWSGLSIRDYAAGLHLSPYSRR 186
E RK RRR G+S RS+AVQ FWAMH+EAM WSG+ +R+YAAGL LSPYS R
Sbjct: 81 EKARKKRQRRRFGVSTDTRSRAVQAFWAMHVEAMNWSGMGVREYAAGLWLSPYSLR 136
BLAST of mRNA_P-wetherbeei_contig11022.1.1 vs. uniprot
Match: A0A439W915_9HYPH (Uncharacterized protein n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A439W915_9HYPH) HSP 1 Score: 67.8 bits (164), Expect = 6.340e-12 Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 1
Query: 25 RRKLCSRRRKGLSHIKRSQAVQTFWAMHIEAMVWSGLSIRDYAAGLHLSPYSRR 186
R+K +RRR +S R++ VQ FWAMH+EAM WSG+ +R+YAA LHLSPYS R
Sbjct: 78 RQKKGTRRRFAISTDVRNRGVQAFWAMHVEAMNWSGMGVREYAAALHLSPYSLR 131
BLAST of mRNA_P-wetherbeei_contig11022.1.1 vs. uniprot
Match: A0A7W3KYH8_9HYPH (Uncharacterized protein n=1 Tax=Aminobacter ciceronei TaxID=150723 RepID=A0A7W3KYH8_9HYPH) HSP 1 Score: 64.3 bits (155), Expect = 8.420e-12 Identity = 28/48 (58.33%), Postives = 39/48 (81.25%), Query Frame = 1
Query: 43 RRRKGLSHIKRSQAVQTFWAMHIEAMVWSGLSIRDYAAGLHLSPYSRR 186
R+R G+S R++A++ FWAMH+EAM WSG+ +R+YAA LHLSPY+ R
Sbjct: 34 RQRFGVSTDVRNRALRAFWAMHVEAMNWSGMGVREYAAALHLSPYALR 81
BLAST of mRNA_P-wetherbeei_contig11022.1.1 vs. uniprot
Match: A0A6N7GX19_9HYPH (Transposase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GX19_9HYPH) HSP 1 Score: 67.0 bits (162), Expect = 1.070e-11 Identity = 32/46 (69.57%), Postives = 37/46 (80.43%), Query Frame = 1
Query: 43 RRRKGLSHIKRSQAVQTFWAMHIEAMVWSGLSIRDYAAGLHLSPYS 180
RRR +S RS+AVQ FWAMH+EAM WSG+S+RDYAAGL LSP S
Sbjct: 58 RRRYAVSTDMRSRAVQAFWAMHVEAMNWSGMSVRDYAAGLQLSPTS 103
BLAST of mRNA_P-wetherbeei_contig11022.1.1 vs. uniprot
Match: A0A7W3KUP2_9HYPH (Transposase-like protein n=6 Tax=Aminobacter TaxID=31988 RepID=A0A7W3KUP2_9HYPH) HSP 1 Score: 65.9 bits (159), Expect = 3.160e-11 Identity = 29/48 (60.42%), Postives = 39/48 (81.25%), Query Frame = 1
Query: 43 RRRKGLSHIKRSQAVQTFWAMHIEAMVWSGLSIRDYAAGLHLSPYSRR 186
R+R G+S R++A+Q FWAMH+EAM WSG+ +R+YAA LHLSPY+ R
Sbjct: 84 RQRFGVSTDVRNRALQAFWAMHVEAMNWSGMGVREYAAALHLSPYALR 131
BLAST of mRNA_P-wetherbeei_contig11022.1.1 vs. uniprot
Match: UPI0010A95662 (transposase n=1 Tax=Mesorhizobium TaxID=68287 RepID=UPI0010A95662) HSP 1 Score: 65.9 bits (159), Expect = 3.370e-11 Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 1
Query: 40 SRRRKGLSHIKRSQAVQTFWAMHIEAMVWSGLSIRDYAAGLHLSPYS 180
+R R +S RS+AVQ FWAMH+EAM WSG+ +R+YAA LHLSPYS
Sbjct: 83 ARLRYAVSTDMRSRAVQAFWAMHVEAMNWSGMGVREYAAALHLSPYS 129
BLAST of mRNA_P-wetherbeei_contig11022.1.1 vs. uniprot
Match: UPI001BDC1688 (transposase n=1 Tax=Aminobacter anthyllidis TaxID=1035067 RepID=UPI001BDC1688) HSP 1 Score: 64.3 bits (155), Expect = 8.060e-11 Identity = 28/48 (58.33%), Postives = 39/48 (81.25%), Query Frame = 1
Query: 43 RRRKGLSHIKRSQAVQTFWAMHIEAMVWSGLSIRDYAAGLHLSPYSRR 186
R+R G+S R++A++ FWAMH+EAM WSG+ +R+YAA LHLSPY+ R
Sbjct: 34 RQRFGVSTDVRNRALRAFWAMHVEAMNWSGMGVREYAAALHLSPYALR 81
BLAST of mRNA_P-wetherbeei_contig11022.1.1 vs. uniprot
Match: UPI001FF00C39 (transposase n=1 Tax=Mesorhizobium sp. B3-1-9 TaxID=2589892 RepID=UPI001FF00C39) HSP 1 Score: 64.7 bits (156), Expect = 8.420e-11 Identity = 31/49 (63.27%), Postives = 38/49 (77.55%), Query Frame = 1
Query: 40 SRRRKGLSHIKRSQAVQTFWAMHIEAMVWSGLSIRDYAAGLHLSPYSRR 186
+RRR +S R++AVQ FWAMH+EAM WSG+ IR+YAA LHLSP S R
Sbjct: 81 ARRRFAVSTDVRNRAVQAFWAMHVEAMNWSGMGIREYAAALHLSPTSLR 129
BLAST of mRNA_P-wetherbeei_contig11022.1.1 vs. uniprot
Match: A0A3S1ZY27_9HYPH (Uncharacterized protein n=2 Tax=Mesorhizobium TaxID=68287 RepID=A0A3S1ZY27_9HYPH) HSP 1 Score: 63.9 bits (154), Expect = 1.630e-10 Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 1
Query: 1 QREVDAEV-RRKLCSRRRKGLSHIKRSQAVQTFWAMHIEAMVWSGLSIRDYAAGLHLSPYSRR 186
Q+ ++A+ RRK +R R +S R++AVQ +WAMH+EAM WSG+ +R+YAA LHLSP S R
Sbjct: 69 QKRLEAQAKRRKKRARLRFAVSTDVRNRAVQAYWAMHVEAMNWSGMGVREYAAALHLSPTSLR 131
BLAST of mRNA_P-wetherbeei_contig11022.1.1 vs. uniprot
Match: UPI00124EC808 (transposase n=1 Tax=Brucella anthropi TaxID=529 RepID=UPI00124EC808) HSP 1 Score: 63.5 bits (153), Expect = 2.250e-10 Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 19 EVRRKLCSRRRKGLSHIKRSQAVQTFWAMHIEAMVWSGLSIRDYAAGLHLSPYSRR 186
E RRK +RRR +S +R++ +Q FWAMHIEAM WSG+ +R+YAA L LSP S R
Sbjct: 76 ENRRKKRARRRFSVSTDERNRGLQAFWAMHIEAMNWSGMGVREYAASLQLSPTSLR 131 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11022.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11022.1.1 >prot_P-wetherbeei_contig11022.1.1 ID=prot_P-wetherbeei_contig11022.1.1|Name=mRNA_P-wetherbeei_contig11022.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=62bp QREVDAEVRRKLCSRRRKGLSHIKRSQAVQTFWAMHIEAMVWSGLSIRDYback to top mRNA from alignment at P-wetherbeei_contig11022:6..191+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11022.1.1 ID=mRNA_P-wetherbeei_contig11022.1.1|Name=mRNA_P-wetherbeei_contig11022.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=186bp|location=Sequence derived from alignment at P-wetherbeei_contig11022:6..191+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11022:6..191+ >mRNA_P-wetherbeei_contig11022.1.1 ID=mRNA_P-wetherbeei_contig11022.1.1|Name=mRNA_P-wetherbeei_contig11022.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=186bp|location=Sequence derived from alignment at P-wetherbeei_contig11022:6..191+ (Phaeothamnion wetherbeei SAG_119_79)back to top |