mRNA_P-wetherbeei_contig1101.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1101.4.1 vs. uniprot
Match: A0A836CIT0_9STRA (2',3'-cyclic-nucleotide 3'-phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIT0_9STRA) HSP 1 Score: 129 bits (323), Expect = 2.090e-34 Identity = 72/185 (38.92%), Postives = 105/185 (56.76%), Query Frame = 1
Query: 10 YATPSFVGHSLWLCPS-PNSDLFTNLIQEIATACKTPVFPPHVTLLAGASLPEGQLLDRCRGLAAKLQPATLKVTEVASKDLYFQCVFALLAKDESLLSWRRLASEAFEEQECDLNAFMPHLSLAYGDIDDATKRQIRADVEG--AVIGCSF-------EVEALEVWCTQGRVEEWRQVARLPFT 534
YA+ +FVGHSLWL P+ P D ++ EI+ +P F PH TLLAG E +++ + R LA ++ + + VA+K LYFQ VFAL+ + ++ A EAF E +MPH+SL YGD+DD T+ I+ D + A G S ++ +EVW T+G VEEWR+ A +P +
Sbjct: 2 YASKTFVGHSLWLLPAQPALDALQEVVMEISVKRHSPCFKPHCTLLAGLPESEEEVIRKTRDLALRVAATPMTIDRVATKQLYFQSVFALIKAKDEAMNLHATAVEAFGVPEGGA-PYMPHISLFYGDVDDKTRSAIKDDAQALLAARGMSLGSPESELSMDTIEVWNTEGPVEEWRRCAVVPLS 185
BLAST of mRNA_P-wetherbeei_contig1101.4.1 vs. uniprot
Match: A0A1E7F0G3_9STRA (LigT-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F0G3_9STRA) HSP 1 Score: 115 bits (289), Expect = 4.180e-29 Identity = 66/194 (34.02%), Postives = 109/194 (56.19%), Query Frame = 1
Query: 10 YATPSFVGHSLWLCPSPNSDL-FTNLIQEIATACKTPVFPPHVTLLAGASLPEGQLLDRCRGLAAKLQPATLKVTEVASKDLYFQCVFALLAKDESLLSWRRLASEAFEEQECDLNAFMPHLSLAYGDIDDATKRQ----------------IRADVEG-AVIGCSFEVEALEVWCTQGRVEEWRQVARLPFTG 537
Y + SF+GHSLW P +S + + +LI + + +T F PH+TL+A E + R + LA+ L P T + +++ D YF+CV+A + + E++++ LA + F E+ D + ++PH+SL YGD DD K+ +R + +G A S +V+A+EVW T+G V+EW +V +P TG
Sbjct: 8 YKSSSFIGHSLWFVPCGDSKIAYESLITDASKNLETFRFIPHITLVAALLDGEIDVCVRTKKLASTLAPFTFEFDQLSHGDAYFKCVYAQMKRTETVVAANALARQFFPERSSDPD-YIPHMSLVYGDFDDTIKQHHIIPTLENSMMEDQDGVRNNSKGIAAAIASIQVDAIEVWSTEGDVKEWYKVETVPLTG 200
BLAST of mRNA_P-wetherbeei_contig1101.4.1 vs. uniprot
Match: A0A0L0HFE1_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HFE1_SPIPD) HSP 1 Score: 106 bits (264), Expect = 1.000e-25 Identity = 58/172 (33.72%), Postives = 95/172 (55.23%), Query Frame = 1
Query: 28 VGHSLWLCPSPNS--DLFTNLIQEIATACKTPVFPPHVTLLAGASLPEGQLLDRCRGLAAKLQPATLKVTEVASKDLYFQCVFALLAKDESLLSWRRLASEAFEEQECDLNAFMPHLSLAYGDIDDATKRQIRADV--EGAVIGCSFEVEALEVWCTQGRVEEWRQVARLPF 531
V +SLWLCPS + +I + TP + PH+TLL G + + ++ R +A + ++++A+KDLY+QCV A+ + L+ A + FE+++ L F PHLSL YGD+D KR+I +V E V+G +V+++++W T G E+W +A P
Sbjct: 4 VVYSLWLCPSEPTVQSYLKKVIDTFSDRLDTPKWNPHITLLGGINTSKEDVIALTRKVADAGANFNVTLSDIATKDLYYQCVMAVPHPSDPLIELNTTARKVFEKEDQPL--FWPHLSLIYGDLDKELKREIAEEVKKEFNVVGQIVDVKSIQIWSTTGSPEKWEFIAETPL 173
BLAST of mRNA_P-wetherbeei_contig1101.4.1 vs. uniprot
Match: A0A5D6XK14_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XK14_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.340e-22 Identity = 57/167 (34.13%), Postives = 91/167 (54.49%), Query Frame = 1
Query: 34 HSLWLCPSPNSDL-FTNLIQEIATACKTPVFPPHVTLLAGAS-LPEGQLLDRCRGLAAKLQPATLKVTEVASKDLYFQCVFALLAKDESLLSWRRLASEAFEEQECDLNAFMPHLSLAYGDIDDATKRQIRADVEGAVIGCS-FEVEALEVWCTQGRVEEWRQVARL 525
+SLW P P ++ +I A +TP F PH+TLL G S + E +++ + LA + ++ +VASKDLYFQCVF LL + L ++A+ + D FMPH+SL YG++++ATK ++ A + + +++ L++W T G V W VA
Sbjct: 9 YSLWAAPEPQAERGIAEMIHASAQRLQTPSFLPHMTLLGGISGVNEADAVEKTKQLAEAMHVLAPEIRKVASKDLYFQCVFLLLQLSDEL-------ADAYRAAKQDNVEFMPHISLVYGELNEATKEEVVAALNPHFDSSAPVKLDRLQLWNTTGAVGAWTLVAEF 168
BLAST of mRNA_P-wetherbeei_contig1101.4.1 vs. uniprot
Match: A0A2D4BSY2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSY2_PYTIN) HSP 1 Score: 93.2 bits (230), Expect = 8.270e-19 Identity = 57/176 (32.39%), Postives = 91/176 (51.70%), Query Frame = 1
Query: 10 YATPSFVGHSLWLCPSPNS-DLFTNLIQEIATACKTPVFPPHVTLLAGAS-LPEGQLLDRCRGLAAKLQPATLKVTEVASKDLYFQCVFALLAKDESLLSWRRLASEAFEEQECDLNAFMPHLSLAYGDIDDATKRQIRADVEGAVIGCSFEVEALEVWCTQGRVEEWRQVARLPF 531
YA+P FVG+SLWL P + D+ ++++E A +TP F PH+TLL + + E + + +A +L+ L+++ VASK L RR QE D FMPHLSL YGD+ + ++ ++ ++ + G + +L++W T G V+ W VA LP
Sbjct: 442 YASPEFVGYSLWLVPDGEAHDVLHDVVREYAARLQTPPFLPHITLLGAVTEMTEAAATETTQRIAERLRAMDLEISVVASK-----------------LFDRR--------QEPD---FMPHLSLVYGDLGEQQRQDLKRELGPRIDGMRLHISSLQLWNTSGPVKNWAMVADLPL 589
BLAST of mRNA_P-wetherbeei_contig1101.4.1 vs. uniprot
Match: A0A7Z8PBR3_9BACT (2'-5' RNA ligase family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Z8PBR3_9BACT) HSP 1 Score: 84.7 bits (208), Expect = 2.440e-17 Identity = 55/173 (31.79%), Postives = 84/173 (48.55%), Query Frame = 1
Query: 34 HSLWLCPSPNSD-----LFTNLIQEIATACKTPVFPPHVTLLAGASLPEGQLLDRCRGLAAKLQPATLKVTEVASKDLYFQCVFALLAKDESLLSWRRLASEAFEEQECDLNAFMPHLSLAYGDIDDATKRQIRADVEGAVIGCSFEVEALEVWCTQGRVEEWRQVARLPFTG 537
+++WL P P + T L Q++A P FPPH+TL +G + E QL+D R LA P L+ + +F+ + + LLS+R A + F + F PHLSLAYG++D+ +R +E + ++ +W QG V WRQVA + TG
Sbjct: 14 YAIWLNPDPQAQEALLPQMTALRQDLAG----PAFPPHLTLTSGIAGIEEQLVDHLRVLAENQAPFRLQPRGIQVSGDFFRAITVAVDSPPQLLSFRSQACQRFGLDA--MRPFHPHLSLAYGEVDNERLHHLRRHLETRSWP-NLHIQRCSLWRLQGPVSNWRQVADVGLTG 179
BLAST of mRNA_P-wetherbeei_contig1101.4.1 vs. uniprot
Match: A0A1Y1IM29_KLENI (Uncharacterized protein (Fragment) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IM29_KLENI) HSP 1 Score: 84.3 bits (207), Expect = 4.380e-17 Identity = 51/161 (31.68%), Postives = 83/161 (51.55%), Query Frame = 1
Query: 82 LIQEIATACKTPVFPPHVTLLAGAS--LPEGQLLDRCRGLAAKLQPATLKVTEVASKDLYFQCVFALLAKDESLLSWRRLASEAFEEQECDLNAFMPHLSLAYGDIDDATKRQIRADVEGA----VIGCSFEVEALEVWCTQGR---VEEWRQVARLPFTG 537
LI ++++ TP F PHVT+L G L + Q+L R R LAA++ P +V +VA YFQ V+ + KD +L+ + F+ A+MPH+SL YGD+ + + Q+ V G ++ F V + ++ T ++ W +VA P +G
Sbjct: 28 LIADLSSQHGTPPFSPHVTVLGGFGDQLDQDQVLARTRALAAQVAPYRCRVADVACGSSYFQMVYLRMHKDAPVLNAHAASVSCFQVAPSSKPAYMPHMSLLYGDLANEVREQVVEAVAGQHKDLLVDTEFLVRSFHLYRTDPTDLLMKTWEEVAVFPLSG 188
BLAST of mRNA_P-wetherbeei_contig1101.4.1 vs. uniprot
Match: A0A0F9CS41_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9CS41_9ZZZZ) HSP 1 Score: 82.0 bits (201), Expect = 1.550e-16 Identity = 49/150 (32.67%), Postives = 80/150 (53.33%), Query Frame = 1
Query: 73 FTNLIQEIATACK-TPVFPPHVTLLAGASLPEGQLLDRCRGLAAKLQPATLKVTEVAS-KDLYFQCVFALLAKDESLLSWRRLASEAF---EEQECDLNAFMPHLSLAYGDIDDATKRQIRADVEGAVIGCSFEVEALEVWCTQGRVEEW 507
F +LI+ +A +P+F H+TLL G E LL LA +QP +++ +A +D +++C++ E LL R+ A F + + AFMPHLS+ YG ID+ RQ+ + G+ +GC+F E++ ++ T G EW
Sbjct: 3 FNSLIEALAREHPPSPLFASHITLLGGIRGAEDDLLQGLNELAGAIQPFQVRLEGLAGHEDSFYRCLYLRAEPSEELLRARKEAERIFTRFRNEASEGEAFMPHLSILYGRIDNEA-RQMMINSLGSALGCNFRAESVSLYRTDGAPAEW 151
BLAST of mRNA_P-wetherbeei_contig1101.4.1 vs. uniprot
Match: A0A316VG84_9BASI (2, 3 cyclic phosphodiesterase n=1 Tax=Meira miltonrushii TaxID=1280837 RepID=A0A316VG84_9BASI) HSP 1 Score: 82.0 bits (201), Expect = 5.840e-16 Identity = 61/211 (28.91%), Postives = 95/211 (45.02%), Query Frame = 1
Query: 10 YATPSFVGHSLWLCPSPNSDL------FTNLIQEIATACKTPVFPPHVTLLAGASLPEGQLLDRC----RGLAAKLQPAT-----LKVTEVASKDLYFQCVFALLAKDESLLSWRRLASEAFEEQECDLNAFMPHLSLAYGDIDDATKRQIRADVE---------------GAVIGCS---------FEVEALEVWCTQGRVEEWRQVARL 525
Y+ +F G+SLWL P+ ++ ++ Q++ P F PHVTLL+G + +G D+ +G + T LK+ EV ++ LYFQC+ L K LLS +AF D + PH SL YG + TK Q++ ++ G G S E+ A+E+W T G V +W++V R+
Sbjct: 8 YSQSTFTGYSLWLVPTRQEEVNILKDGMQHIRQQVHADISAP-FEPHVTLLSGLNEEDGWTADKIWHAFKGAGQRWASNTKGVLSLKLEEVTTRGLYFQCILIALEKTSELLSINAYMRDAFNAH--DQPPYFPHCSLLYGHL---TKEQMQQTIQSLKQGDRPLYHETGKGIAFGISDSGKNPIKQIELGAVELWNTNGSVADWKRVHRI 212
BLAST of mRNA_P-wetherbeei_contig1101.4.1 vs. uniprot
Match: A0A1G2HQN0_9BACT (Uncharacterized protein n=1 Tax=Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_01_FULL_39_25 TaxID=1802202 RepID=A0A1G2HQN0_9BACT) HSP 1 Score: 79.3 bits (194), Expect = 2.760e-15 Identity = 50/172 (29.07%), Postives = 89/172 (51.74%), Query Frame = 1
Query: 28 VGHSLWLCPSPNSDLFTNL---IQEIATACKTPVFPPHVTLLAGA-SLPEGQLLDRCRGLAAKLQPATLKVTEVASKDLYFQCVFALLAKDESLLSWRRLASEAFEEQECDLNAFMPHLSLAYGDIDDATKRQIRADVEGAVIGCSFEVEALEVWCTQGRVEEWRQVARLPF 531
+G+ L+ P +LF +L I +A F PH+TLLA E +L+ + + LAA +QP ++ E+ +D YF+ ++ + + + + A E F Q D+NA+MPHLSL YG++ + K ++ A + F V+ + ++ T+G ++W Q+ P
Sbjct: 10 IGYHLFFLPQ--GELFDSLQSTINTLAEKYSGVKFEPHLTLLARIPKAEEAELVAKTQQLAATMQPFEVEPKEILIEDAYFRALYCKAEPNAKMEEYHQKALEMFGVQ--DVNAYMPHLSLYYGNVPQSIKEKMIASLS-LPASMKFLVDKVYLYRTEGEAQDWMQIGGYPL 176 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1101.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1101.4.1 >prot_P-wetherbeei_contig1101.4.1 ID=prot_P-wetherbeei_contig1101.4.1|Name=mRNA_P-wetherbeei_contig1101.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=181bp MVSYATPSFVGHSLWLCPSPNSDLFTNLIQEIATACKTPVFPPHVTLLAGback to top mRNA from alignment at P-wetherbeei_contig1101:7175..7857- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1101.4.1 ID=mRNA_P-wetherbeei_contig1101.4.1|Name=mRNA_P-wetherbeei_contig1101.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=683bp|location=Sequence derived from alignment at P-wetherbeei_contig1101:7175..7857- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1101:7175..7857- >mRNA_P-wetherbeei_contig1101.4.1 ID=mRNA_P-wetherbeei_contig1101.4.1|Name=mRNA_P-wetherbeei_contig1101.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig1101:7175..7857- (Phaeothamnion wetherbeei SAG_119_79)back to top |