mRNA_P-wetherbeei_contig11009.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11009.1.1 vs. uniprot
Match: D8LRQ7_ECTSI (DnaJ Cysteine-Rich Domain-Containing Protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ7_ECTSI) HSP 1 Score: 87.0 bits (214), Expect = 6.550e-19 Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 1
Query: 1 TANDYVSAFAGGTVGVMGTLVALELKKFRVKERSTCPYCSGAGKLVCAQCFGSGSLLVRSTTTDLRLSVPXXXXXXXXXXXXXXXXXXGRAVPLMLDR 294
+AN++++ AGG+VGV+GTL+ LELK+ ++K R CPYC G+GKLVCA CF +G+ V+ +D ++P GRAVP LDR
Sbjct: 116 SANEWIAGVAGGSVGVLGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAVCFSAGTFTVKLPGSDTYSTLPCPGCAGNKYITCLNCRGDGRAVPRELDR 213
BLAST of mRNA_P-wetherbeei_contig11009.1.1 vs. uniprot
Match: A0A835YW14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW14_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.550e-18 Identity = 61/97 (62.89%), Postives = 70/97 (72.16%), Query Frame = 1
Query: 7 NDYVSAFAGGTVGVMGTLVALELKKFRVKERSTCPYCSGAGKLVCAQCFGSGSLLVR--STTTDLRLSVPXXXXXXXXXXXXXXXXXXGRAVPLMLD 291
N+ +S FAGGTVGVMGTL+ LELKK V +RS CPYC GAG L CA+C+G G LL R S LSVP XXXXXXXXXXXXXX G +VP +L+
Sbjct: 80 NELMSGFAGGTVGVMGTLIGLELKKQNVVKRSVCPYCQGAGTLTCARCYGVGILLARRRSDGAAAPLSVPCGCXXXXXXXXXXXXXXDGASVPPLLE 176
BLAST of mRNA_P-wetherbeei_contig11009.1.1 vs. uniprot
Match: A0A7R9U8V3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8V3_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.070e-17 Identity = 59/98 (60.20%), Postives = 73/98 (74.49%), Query Frame = 1
Query: 1 TANDYVSAFAGGTVGVMGTLVALELKKFRVKERSTCPYCSGAGKLVCAQCFGSGSLLVRSTTTDLRLSVPXXXXXXXXXXXXXXXXXXGRAVPLMLDR 294
TA D AFAGGTVGVMG+LVA+E++K + ++R+ CPYC G G+L CA C+G+G + + + V XXXXXXXXXXXXXXXXXX R VPLMLDR
Sbjct: 43 TAGDVACAFAGGTVGVMGSLVAIEIRKLQQRKRNACPYCVGTGRLTCAVCWGAGKVEIAGAQGSQTVVVDXXXXXXXXXXXXXXXXXXXRLVPLMLDR 140
BLAST of mRNA_P-wetherbeei_contig11009.1.1 vs. uniprot
Match: A0A2V3J075_9FLOR (Protein ORANGE-LIKE, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J075_9FLOR) HSP 1 Score: 73.6 bits (179), Expect = 3.820e-14 Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 1 TANDYVSAFAGGTVGVMGTLVALELKKFRVKERSTCPYCSGAGKLVCAQCFGSGSLLVRSTTT 189
T + +A AGGTVGVMGT++ LEL++ RVK R CPYC G GKL CA C+ G++ R+ T
Sbjct: 65 TVTEITAAIAGGTVGVMGTIITLELQRQRVKHRKQCPYCRGTGKLPCASCYTIGAVPSRTALT 127
BLAST of mRNA_P-wetherbeei_contig11009.1.1 vs. uniprot
Match: M1UXZ1_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1UXZ1_CYAM1) HSP 1 Score: 73.6 bits (179), Expect = 4.450e-14 Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 1
Query: 10 DYVSAFAGGTVGVMGTLVALELKKFRVKERSTCPYCSGAGKLVCAQCFGSGSL 168
+ SAFAGG++GV+GTL+ LEL + R +ER CPYCSG GKLVC QC G+L
Sbjct: 86 ELASAFAGGSIGVLGTLLTLELAQTRARERMQCPYCSGRGKLVCGQCLALGTL 138
BLAST of mRNA_P-wetherbeei_contig11009.1.1 vs. uniprot
Match: A0A7S1TK16_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TK16_9RHOD) HSP 1 Score: 72.0 bits (175), Expect = 6.480e-14 Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 1 TANDYVSAFAGGTVGVMGTLVALELKKFRVKERSTCPYCSGAGKLVCAQCFGSGSLLV 174
T +AFAGGTVGVMG+L+A EL++ R KE CPYC G G+L C +C G G LL+
Sbjct: 22 TVAQIAAAFAGGTVGVMGSLIAWELRQLRDKESKQCPYCLGTGRLRCGRCLGQGELLI 79
BLAST of mRNA_P-wetherbeei_contig11009.1.1 vs. uniprot
Match: A0A7S2WEZ4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEZ4_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 8.070e-14 Identity = 30/57 (52.63%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 4 ANDYVSAFAGGTVGVMGTLVALELKKFRVKERSTCPYCSGAGKLVCAQCFGSGSLLV 174
A D ++ FAGG+VGV+G + A+E+KK K++S CPYC+G G L CA+C+GSG ++V
Sbjct: 53 AADVLAGFAGGSVGVLGAIFAIEMKKRETKKKSECPYCNGNGHLTCAKCYGSGFMVV 109
BLAST of mRNA_P-wetherbeei_contig11009.1.1 vs. uniprot
Match: A0A835YP24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP24_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 8.490e-14 Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 1
Query: 1 TANDYVSA-FAGGTVGVMGTLVALELKKFRVKERSTCPYCSGAGKLVCAQCFGSGSLLVRSTTTDLRLSVPXXXXXXXXXXXXXXXXXXGRAVPLMLDR 294
++ ++VSA GG+VGV+GTL+ +E KK+ V++ S C YC G+G LVC QC G+G L + + T+ +S+ GR+VP L+R
Sbjct: 12 SSTEHVSAGILGGSVGVIGTLLGIEWKKYNVRQASECCYCRGSGHLVCGQCLGTGELTLVNAVTNKSISLGCPTCSGMTYITCINCKGDGRSVPNFLNR 110
BLAST of mRNA_P-wetherbeei_contig11009.1.1 vs. uniprot
Match: R7QE93_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE93_CHOCR) HSP 1 Score: 72.0 bits (175), Expect = 3.640e-13 Identity = 31/56 (55.36%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 1 TANDYVSAFAGGTVGVMGTLVALELKKFRVKERSTCPYCSGAGKLVCAQCFGSGSL 168
T N+ +A AGGTVGVMGT++ LE+++ +VKER CPYC G GKL CA C+ G++
Sbjct: 119 TINEITAAIAGGTVGVMGTIITLEVRRQQVKERKQCPYCRGNGKLPCATCYTVGAV 174
BLAST of mRNA_P-wetherbeei_contig11009.1.1 vs. uniprot
Match: A0A7S2V2Y1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Y1_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.260e-12 Identity = 55/89 (61.80%), Postives = 63/89 (70.79%), Query Frame = 1
Query: 25 FAGGTVGVMGTLVALELKKFRVKERSTCPYCSGAGKLVCAQCFGSGSLLVRSTTTDLRLSVPXXXXXXXXXXXXXXXXXXGRAVPLMLD 291
FAGG VG +GTL ALE K+ +V R CPYC+G G L CA C G+G +L + T L V XXXXXXXXXXXXXXXXXX AVPL+LD
Sbjct: 99 FAGGLVGCLGTLAALESKRSQVNSRKLCPYCTGKGTLTCAHCLGTGGILSINPDTGAELRVDXXXXXXXXXXXXXXXXXXXXAVPLILD 187 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11009.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11009.1.1 >prot_P-wetherbeei_contig11009.1.1 ID=prot_P-wetherbeei_contig11009.1.1|Name=mRNA_P-wetherbeei_contig11009.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=98bp TANDYVSAFAGGTVGVMGTLVALELKKFRVKERSTCPYCSGAGKLVCAQCback to top mRNA from alignment at P-wetherbeei_contig11009:610..1150+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11009.1.1 ID=mRNA_P-wetherbeei_contig11009.1.1|Name=mRNA_P-wetherbeei_contig11009.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=541bp|location=Sequence derived from alignment at P-wetherbeei_contig11009:610..1150+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11009:610..1150+ >mRNA_P-wetherbeei_contig11009.1.1 ID=mRNA_P-wetherbeei_contig11009.1.1|Name=mRNA_P-wetherbeei_contig11009.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=294bp|location=Sequence derived from alignment at P-wetherbeei_contig11009:610..1150+ (Phaeothamnion wetherbeei SAG_119_79)back to top |