mRNA_P-wetherbeei_contig10999.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10999.1.1 vs. uniprot
Match: D7FPU2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPU2_ECTSI) HSP 1 Score: 219 bits (558), Expect = 7.510e-68 Identity = 122/250 (48.80%), Postives = 148/250 (59.20%), Query Frame = 1
Query: 1 LDGVRRDGQSLSLAFRSIGEIPEELAAREGPHVTDLNLTECDLRSLAGLARFPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARFVDQVAELFPSLTCLSMMRNPACPGLMDIQRPDLEACRLYRRYVLWRLPRLHSVDGADVTPEERVDASLRGRFAEMQRPRETCGGGG--TMGKGSGKRRVGLFERAPSAVYDPAGVRPAGAASLYKSPRPSVAVLTMATRRYDGRHSEGNRFIVDDHL 744
L V+RDG LSLA+R G +PE LA EG +VT LNLTECDL+S + L FP L F+DQV E FP ++ LSMMRNPACPGLMDI+RPD+EACR+YR YV++R P+L +VDG DVT ER DA+LRG+F +RP+E GG + + GK G+F+R P AV DP VRP + S +P V V RRYDG HSEGNRFIVDDHL
Sbjct: 18 LKSVKRDGTELSLAYRPFGSVPESLALAEGRYVTSLNLTECDLKSFSNLVCFPSLQTLVLDKNDLEDIKACPTIPTLTTLWFNNNRVADLPAFLDQVLERFPLISDLSMMRNPACPGLMDIKRPDMEACRMYRTYVVFRAPQLVTVDGVDVTEGERRDAALRGQFTVKRRPQEAAAGGAHPMLAEPGGKSSGGIFDRKPKAVLDPLAVRPLVNVASLPSRKP-VGVYGRE-RRYDGAHSEGNRFIVDDHL 265
BLAST of mRNA_P-wetherbeei_contig10999.1.1 vs. uniprot
Match: A0A7S2XY06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY06_9STRA) HSP 1 Score: 155 bits (392), Expect = 4.530e-43 Identity = 82/176 (46.59%), Postives = 101/176 (57.39%), Query Frame = 1
Query: 1 LDGVRRDGQSLSLAFRSIGEIPEELAAREGPHVTDLNLTECDLRSLAGLARFPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARFVDQVAELFPSLTCLSMMRNPACPGLMDIQRPDLEACRLYRRYVLWRLPRLHSVDGADVTPEERVDASLRGRFAEMQRPRETCG 528
L+GV R G LSL+FR I EIP LA+REGPHV LNLTEC+L S L +FP L F+D + + FP L LSMMRNPACPGLMD+ PDLEACRLYR YVL+R P+L ++D +VT +E +A LRG+FA +RP + G
Sbjct: 38 LEGVERIGHELSLSFRPIQEIPAVLASREGPHVKTLNLTECELSSFKNLHQFPMLETLILDKNGLEGLEGCPVMETVTTLWFNNNNVSDLPVFMDNLMQCFPRLAYLSMMRNPACPGLMDLITPDLEACRLYRLYVLYRAPQLRALDSTEVTQQELQEAKLRGQFAVKRRPASSVG 213
BLAST of mRNA_P-wetherbeei_contig10999.1.1 vs. uniprot
Match: F0YNY0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNY0_AURAN) HSP 1 Score: 149 bits (377), Expect = 4.440e-41 Identity = 116/242 (47.93%), Postives = 138/242 (57.02%), Query Frame = 1
Query: 19 DGQSLSLAFRSIGEIPEELAAREGPHVTDLNLTECDLRSLAGLARFPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARFVDQVAELFPSLTCLSMMRNPACPGLMDIQRPDLEACRLYRRYVLWRLPRLHSVDGADVTPEERVDASLRGRFAEMQRPRETCGGGGTMGKGSGKRRVGLFERAPSAVYDPAGVRPAGAASLYKSPRPSVAVLTMATRRYDGRHSEGNRFIVDDHL 744
+G LSLA+ + IP ELA+ EGPHV LNLTE ++SL L FP XXXXXXXXXXXXXXXXXXX L F+D VA LFP +T LS MRNPACPGLMDI PD EAC+ YR YVL RLPRL +D ADV ER +A++RG+F+ +RP G GL E +P VR A+ S + S YDG++SEGNRFI +D L
Sbjct: 7 EGGELSLAYSELESIPAELASGEGPHVRTLNLTETGIKSLKALELFPRLQTLVLDKNALVGLIXXXXXXXXXXXXXXXXXXXDLVGFIDDVARLFPRITYLSCMRNPACPGLMDIVTPDEEACKHYRLYVLHRLPRLECLDAADVIGPERSEAAIRGQFSIKRRPNNQHAPAGP----------GLVEIGNKDEGNPFAVRSEDIAASSASRKSS----------YDGQNSEGNRFIRNDLL 228
BLAST of mRNA_P-wetherbeei_contig10999.1.1 vs. uniprot
Match: F0YGL9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGL9_AURAN) HSP 1 Score: 134 bits (338), Expect = 6.370e-36 Identity = 108/165 (65.45%), Postives = 123/165 (74.55%), Query Frame = 1
Query: 19 DGQSLSLAFRSIGEIPEELAAREGPHVTDLNLTECDLRSLAGLARFPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARFVDQVAELFPSLTCLSMMRNPACPGLMDIQRPDLEACRLYRRYVLWRLPRLHSVDGADVTPEERVDASLRGRFAEMQRP 513
+G LSLA+ + IP ELA EGP V LNLTE ++SL L FP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L F+D VA LFP +T LS MRNPACPGLMDI PD EAC+ YR YVL RLPRL +D ADV ER +A++RG+F+ +RP
Sbjct: 7 EGSELSLAYSELESIPAELANGEGPRVRTLNLTETGIKSLKALELFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVGFIDDVARLFPRITYLSCMRNPACPGLMDIVTPDEEACKHYRLYVLHRLPRLECLDAADVIGPERSEAAIRGQFSIKRRP 171
BLAST of mRNA_P-wetherbeei_contig10999.1.1 vs. uniprot
Match: A0A5A8E2Y0_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E2Y0_CAFRO) HSP 1 Score: 101 bits (251), Expect = 2.920e-22 Identity = 68/239 (28.45%), Postives = 100/239 (41.84%), Query Frame = 1
Query: 28 SLSLAFRSIGEIPEELAAREGPHVTDLNLTECDLRSLAGLARFPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARFVDQVAELFPSLTCLSMMRNPACPGLMDIQRPDLEACRLYRRYVLWRLPRLHSVDGADVTPEERVDASLRGRFAEMQRPRETCGGGGTMGKGSGKRRVGLFERAPSAVYDPAGVRPAGAASLYKSPRPSVAVLTMATRRYDGRHSEGNRFIVDDHL 744
S+ LA + + IP + PHVT L+LT+ L L+GL F + F+D E P++T LS+MRNPA P ++ + D+ A +R YV++R+P L +D A VT ER +A+ +G+F +R T P A S ++ + A L + YDG+HSEGNRFIV+D L
Sbjct: 25 SIVLAGQGLSAIPVDALRDHAPHVTSLDLTDNALMDLSGLELFSALDTLILDKNGLSSLEGAPKLPSVKTLSFNNNAVEDMTSFLDSALEAVPAVTFLSVMRNPASPPMIQLSEEDVAAATRHRLYVVYRVPSLTFLDAAPVTAAERAEAASKGKFLATRRAASTA--------------------PPXXXXXXXXXXXAEGESPKQARKGMTAFLDIGKSTYDGKHSEGNRFIVNDDL 243
BLAST of mRNA_P-wetherbeei_contig10999.1.1 vs. uniprot
Match: A0A813A777_9DINO (Lrmda protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A777_9DINO) HSP 1 Score: 100 bits (249), Expect = 8.380e-22 Identity = 61/178 (34.27%), Postives = 89/178 (50.00%), Query Frame = 1
Query: 268 LARFVDQVAELFPSLTCLSMMRNPACPGLMDIQRPDLEACRLYRRYVLWRLPRLHSVDGADVTPEERVDASLRGRFAEMQRP-----RETCGGGGTMGKGSGKRRVGLF--------------ERAPSAVYDPAGVRPAGAASLYKSPRPSVAVLTMATRRYDGRHSEGNRFIVDDHL 744
LA F+D V FP LT LS+MRNPA P ++ + + D+ + YR Y+++R+P L +D V+ ER +A+ +G+F +++ R T G G G GS + G+ E SA P A + + +PS A L + YDG+HSEGNRFI D L
Sbjct: 86 LAAFMDSVTSNFPGLTTLSLMRNPASPPMVALSQEDIARAKRYRLYIIYRMPALAFLDATPVSTAEREEAAAKGKFLAVRKSAAAAARRTSGVAGQAGTGSRRASSGMDGGLSSSGGHAHAKGEEGGSATASPVAASAVAAEAAPATRKPS-AFLAYSRSSYDGKHSEGNRFITTDQL 262
BLAST of mRNA_P-wetherbeei_contig10999.1.1 vs. uniprot
Match: UPI0014035E72 (leucine-rich melanocyte differentiation-associated protein n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI0014035E72) HSP 1 Score: 85.9 bits (211), Expect = 1.520e-16 Identity = 70/246 (28.46%), Postives = 102/246 (41.46%), Query Frame = 1
Query: 7 GVRRDGQSLSLAFRSIGEIPEELAAREGPHVTDLNLTECDLRSLAGLARFPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARFVDQVAELFPSLTCLSMMRNPACPGLMDIQRPDLEACRLYRRYVLWRLPRLHSVDGADVTPEERVDASLRGRFAEMQRPRETCGGGGTMGKGSGKRRVGLFERAPSAVYDPAGVRPAGAASLYKSPRPSVAVLTMATRRYDGRHSEGNRFIVDDHL 744
GV DG +S + IPE+L ++ G L+L+ LRSL GL F L +D +AE+ PSL LS++ N ACP + D + YR ++L ++P L +D VT +E+ +AS RG F ++ +P+E G + +G + P P G R S +K + Y G+HSEGNRFI DD L
Sbjct: 10 GVVVDGTQVSYISQDCEAIPEQLGSKHGLFTKRLDLSFNLLRSLEGLEEFVCLEELILDNNLLRSDLQLPRLPYLHTLMINKNQITELDSLLDHLAEVVPSLKYLSLLGNVACPNELVNLDNDENDYQRYRFFILHKMPNLKFLDARKVTQKEQREASTRGVFMKVVKPKELATGESDL------NTLGFHQYTPL----PQGTRDG---SNHKG------IFAKCRYAYHGKHSEGNRFIRDDQL 236
BLAST of mRNA_P-wetherbeei_contig10999.1.1 vs. uniprot
Match: A0A812HNT1_9DINO (LRMDA protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812HNT1_9DINO) HSP 1 Score: 87.0 bits (214), Expect = 8.090e-16 Identity = 51/159 (32.08%), Postives = 76/159 (47.80%), Query Frame = 1
Query: 268 LARFVDQVAELFPSLTCLSMMRNPACPGLMDIQRPDLEACRLYRRYVLWRLPRLHSVDGADVTPEERVDASLRGRFAEMQRPRETCGGGGTMGKGSGKRRVGLFERAPSAVYDPAGVRPAGAASLYKSPRPSVAVLTMATRRYDGRHSEGNRFIVDDHL 744
+ F+D E P++T LS+MRNPA P ++ + D+ A +R YV++R+P L +D A VT ER +A+ +G+F +R T P A S ++ + A L + YDG+HSEGNRFIV+D L
Sbjct: 906 MTSFLDSALEAVPAVTFLSVMRNPASPPMIQLSEEDVAAATRHRLYVVYRVPSLTFLDAAPVTAAERAEAASKGKFLATRRAASTA--------------------PPXXXXXXXXXXXAEGESPKQARKGMTAFLDIGKSTYDGKHSEGNRFIVNDDL 1044
BLAST of mRNA_P-wetherbeei_contig10999.1.1 vs. uniprot
Match: A0A7S2CU30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CU30_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 3.020e-15 Identity = 37/59 (62.71%), Postives = 46/59 (77.97%), Query Frame = 1
Query: 322 SMMRNPACPGLMDIQRPDLEACRLYRRYVLWRLPRLHSVDGADVTPEERVDASLRGRFA 498
+M RNPA PGLMDI PDLE+ RLYR YVL+R+P L +D DVT EER +A++RG+FA
Sbjct: 2 NMRRNPAAPGLMDIVTPDLESIRLYRLYVLFRIPDLLMLDSTDVTAEERGEAAVRGQFA 60
BLAST of mRNA_P-wetherbeei_contig10999.1.1 vs. uniprot
Match: A0A6J0TW50_9SAUR (leucine-rich repeat-containing protein C10orf11 homolog isoform X1 n=2 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0TW50_9SAUR) HSP 1 Score: 80.5 bits (197), Expect = 1.340e-14 Identity = 71/246 (28.86%), Postives = 100/246 (40.65%), Query Frame = 1
Query: 7 GVRRDGQSLSLAFRSIGEIPEELAAREGPHVTDLNLTECDLRSLAGLARFPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARFVDQVAELFPSLTCLSMMRNPACPGLMDIQRPDLEACRLYRRYVLWRLPRLHSVDGADVTPEERVDASLRGRFAEMQRPRETCGGGGTMGKGSGKRRVGLFERAPSAVYDPAGVRPAGAASLYKSPRPSVAVLTMATRRYDGRHSEGNRFIVDDHL 744
G+ +G +S + EIPE L + G L+L+ LRS+ GL F L +D + E+ PSL LS++ N ACP + + D R YR +VL +L +L +D V+ ER +ASLRG F ++ +PR+ K +P Y P P+G+ L VL Y G+HSEGNRFI DD L
Sbjct: 3 GLVVNGTQVSYIGQDCKEIPEFLGRKYGNIARRLDLSFNLLRSVEGLETFSSLEELILDNNLLGNDLRLPRLPHLHTLMLNKNQITELEGLLDHLVEVAPSLEYLSLLGNTACPNELVCKDKDEGDYRRYRYFVLHKLTKLKFLDSRKVSRTEREEASLRGAFMKVVKPRDA------------KVSADGSPISPQIHYTPL---PSGSRDLTNH----RGVLGKCRYVYYGKHSEGNRFIRDDQL 229 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10999.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10999.1.1 >prot_P-wetherbeei_contig10999.1.1 ID=prot_P-wetherbeei_contig10999.1.1|Name=mRNA_P-wetherbeei_contig10999.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=249bp LDGVRRDGQSLSLAFRSIGEIPEELAAREGPHVTDLNLTECDLRSLAGLAback to top mRNA from alignment at P-wetherbeei_contig10999:100..1828- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10999.1.1 ID=mRNA_P-wetherbeei_contig10999.1.1|Name=mRNA_P-wetherbeei_contig10999.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1729bp|location=Sequence derived from alignment at P-wetherbeei_contig10999:100..1828- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10999:100..1828- >mRNA_P-wetherbeei_contig10999.1.1 ID=mRNA_P-wetherbeei_contig10999.1.1|Name=mRNA_P-wetherbeei_contig10999.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=747bp|location=Sequence derived from alignment at P-wetherbeei_contig10999:100..1828- (Phaeothamnion wetherbeei SAG_119_79)back to top |