mRNA_P-wetherbeei_contig10997.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10997.1.1 vs. uniprot
Match: A0A835ZAN4_9STRA (Dihydroorotase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAN4_9STRA) HSP 1 Score: 351 bits (900), Expect = 3.110e-118 Identity = 186/255 (72.94%), Postives = 205/255 (80.39%), Query Frame = 1
Query: 7 EEIREAKRSGLVVAAKLYPAGATTNSDSGVTDIELIRPVLQAMSEAGMPLLVHGEVTHDDVDVFDREERFVEEVLKPLIQSMPELKVVMEHITTRAAAAFVSSAPSTVAATVTPQHLLHNRGAIFRGGLRPHMYCLPILKREEDRKALVAAATSGSTKFFLGSDSAPHAEGAKLSACGCAGIFSGHAALELYAEVFEAAGALQHFAAFCSTNGADFYGLPRNAAGAAPTTTLRRAPWTVPATYLFGAARVVRTRA 771
EEI +A++SG V A KLYPAGATTNSDSGVTD+ + PVL+AM+E GMPLLVHGEVT VD+FD+E RFVEEVL PL+ P LKVV EHITT+ AA FV S+ VAAT+TPQHLL+NR IFRGG+RPHMYCLPILKREE R ALV AATSGS K FLG+DSAPHA GAK SACGCAGIFSGHAALELYAEVF+AAGAL F AFCS GADFYGLPRNAA T TL R PW VPA+Y FGA+ VV RA
Sbjct: 89 EEIHQARKSGHVHAVKLYPAGATTNSDSGVTDLAKVYPVLEAMAEVGMPLLVHGEVTASHVDIFDKEARFVEEVLGPLVARFPNLKVVAEHITTKEAAEFVLSSGPNVAATITPQHLLYNRNEIFRGGVRPHMYCLPILKREEHRLALVGAATSGSAKIFLGTDSAPHARGAKESACGCAGIFSGHAALELYAEVFDAAGALDSFGAFCSQRGADFYGLPRNAA----TVTLAREPWRVPASYAFGASEVVPLRA 339
BLAST of mRNA_P-wetherbeei_contig10997.1.1 vs. uniprot
Match: D7FQY0_ECTSI (Dihydroorotase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY0_ECTSI) HSP 1 Score: 333 bits (854), Expect = 2.870e-111 Identity = 171/257 (66.54%), Postives = 201/257 (78.21%), Query Frame = 1
Query: 1 SPEEIREAKRSGLVVAAKLYPAGATTNSDSGVTDIELIRPVLQAMSEAGMPLLVHGEVTHDDVDVFDREERFVEEVLKPLIQSMPELKVVMEHITTRAAAAFVSSAPSTVAATVTPQHLLHNRGAIFRGGLRPHMYCLPILKREEDRKALVAAATSGSTKFFLGSDSAPHAEGAKLSACGCAGIFSGHAALELYAEVFEAAGALQHFAAFCSTNGADFYGLPRNAAGAAPTTTLRRAPWTVPATYLFGAARVVRTRA 771
+PEEI +AK SG V A KLYPAGATTNSDSGVTD+ + P ++AM+E GMPLL+HGEVT VD+FD+E RF+EEV+KPL+Q MP LKVVMEHITT A AFV++AP+ VAAT+TPQHLL+NR AIF+GG+RPHMYCLP+LKRE R LV AATSG+ KFFLG+D+APHA AK+S CGCAGIF+GHAALELY EVFE GAL FA F S +GADFYG+PRN TL + WTVP +Y FG VV RA
Sbjct: 85 TPEEILKAKASGHVYAVKLYPAGATTNSDSGVTDLANVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKPLVQKMPNLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISPCGCAGIFTGHAALELYCEVFEGEGALDRFAGFSSHHGADFYGIPRNEGA----LTLVKEKWTVPGSYKFGQTEVVPLRA 337
BLAST of mRNA_P-wetherbeei_contig10997.1.1 vs. uniprot
Match: A0A6N8E8V9_9GAMM (Dihydroorotase n=1 Tax=Allochromatium palmeri TaxID=231048 RepID=A0A6N8E8V9_9GAMM) HSP 1 Score: 319 bits (818), Expect = 6.150e-106 Identity = 165/257 (64.20%), Postives = 196/257 (76.26%), Query Frame = 1
Query: 1 SPEEIREAKRSGLVVAAKLYPAGATTNSDSGVTDIELIRPVLQAMSEAGMPLLVHGEVTHDDVDVFDREERFVEEVLKPLIQSMPELKVVMEHITTRAAAAFVSSAPSTVAATVTPQHLLHNRGAIFRGGLRPHMYCLPILKREEDRKALVAAATSGSTKFFLGSDSAPHAEGAKLSACGCAGIFSGHAALELYAEVFEAAGALQHFAAFCSTNGADFYGLPRNAAGAAPTTTLRRAPWTVPATYLFGAARVVRTRA 771
+PEEI AK SGLV A KLYPAGATTNS+SGVTDI ++PVL+AM EAGMPLLVHGEVT + +D+FDRE F+E VL+PLI +P L++V+EH+TT A +FV S P T+AAT+TP HLL+NR AI GG+RPH YCLP+LKRE R ALV AATSG +FFLG+DSAPHA G+K CGCAG+FS HAALELYAEVF+ AGAL+ F S +G DFYGLPRN A L R PWTVP +Y FG ++VV RA
Sbjct: 85 TPEEITRAKDSGLVAACKLYPAGATTNSESGVTDIPRLKPVLEAMREAGMPLLVHGEVTDEAIDIFDREPVFIERVLRPLIDQVPGLRIVLEHVTTAEAVSFVRSGPETLAATITPHHLLYNRNAILVGGIRPHFYCLPVLKRERHRLALVEAATSGHPRFFLGTDSAPHAVGSKEGRCGCAGLFSAHAALELYAEVFDQAGALERLEGFASLHGPDFYGLPRNQA----RIRLIREPWTVPESYAFGDSQVVPMRA 337
BLAST of mRNA_P-wetherbeei_contig10997.1.1 vs. uniprot
Match: A0A5D6XNV2_9STRA (Dihydroorotase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNV2_9STRA) HSP 1 Score: 316 bits (810), Expect = 1.140e-104 Identity = 164/257 (63.81%), Postives = 193/257 (75.10%), Query Frame = 1
Query: 1 SPEEIREAKRSGLVVAAKLYPAGATTNSDSGVTDIELIRPVLQAMSEAGMPLLVHGEVTHDDVDVFDREERFVEEVLKPLIQSMPELKVVMEHITTRAAAAFVSSAPSTVAATVTPQHLLHNRGAIFRGGLRPHMYCLPILKREEDRKALVAAATSGSTKFFLGSDSAPHAEGAKLSACGCAGIFSGHAALELYAEVFEAAGALQHFAAFCSTNGADFYGLPRNAAGAAPTTTLRRAPWTVPATYLFGAARVVRTRA 771
+PEEIR A S V A KLYPAGATTNSDSGVTDI + P L+AMSE GMPLLVHGEVT VD+FDRE F+E VL PL+ +MP+LK+VMEHITT AA FV+ AP+ +AAT+TPQHLL+NR IF+GGLRPH YCLP+LKRE+ R AL+ A SGS KFFLG+DSAPH K SACGCAGI+SGHAALELYAE FE+ G L+ F +GADFYGLPRN+ T LR+ PW VPA+Y F + +V +A
Sbjct: 90 TPEEIRRAAASAKVFAVKLYPAGATTNSDSGVTDIANVYPALRAMSELGMPLLVHGEVTDPSVDIFDREAAFIERVLAPLVAAMPQLKIVMEHITTEDAARFVAQAPANIAATITPQHLLYNRNVIFQGGLRPHKYCLPVLKREKHRLALLEAVASGSCKFFLGTDSAPHVAAKKESACGCAGIYSGHAALELYAEAFESIGKLELLRGFACEHGADFYGLPRNSG---EPTVLRQEPWEVPASYPFDGSELVPLKA 343
BLAST of mRNA_P-wetherbeei_contig10997.1.1 vs. uniprot
Match: A0A8K1CF02_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CF02_PYTOL) HSP 1 Score: 315 bits (807), Expect = 3.260e-104 Identity = 165/257 (64.20%), Postives = 194/257 (75.49%), Query Frame = 1
Query: 1 SPEEIREAKRSGLVVAAKLYPAGATTNSDSGVTDIELIRPVLQAMSEAGMPLLVHGEVTHDDVDVFDREERFVEEVLKPLIQSMPELKVVMEHITTRAAAAFVSSAPSTVAATVTPQHLLHNRGAIFRGGLRPHMYCLPILKREEDRKALVAAATSGSTKFFLGSDSAPHAEGAKLSACGCAGIFSGHAALELYAEVFEAAGALQHFAAFCSTNGADFYGLPRNAAGAAPTTTLRRAPWTVPATYLFGAARVVRTRA 771
SPEEI+ A SG V A KLYPAGATTNSDSGVT+IE + P LQAMSE GMPLL+HGEVT VDVFDRE F+E VLKPL+ P+LK+VMEHITT AA FV+ AP+ VAAT+TPQHLL+NR AIF+GGLRPH YCLP+LKRE+ R+ALV A SGSTKFFLG+DSAPH + K S+CGCAGI+S HAA+ELYAE F + G ++ AF NGADFYG+PRN T L+ W VPA+Y F + +V RA
Sbjct: 89 SPEEIKTAAASGKVFAVKLYPAGATTNSDSGVTNIEKVYPALQAMSEVGMPLLMHGEVTDQCVDVFDREAVFIERVLKPLVSKFPQLKIVMEHITTEEAAKFVAQAPANVAATITPQHLLYNRNAIFQGGLRPHKYCLPVLKREKHRQALVKAIGSGSTKFFLGTDSAPHLQSKKESSCGCAGIYSAHAAVELYAEAFASIGKIELLEAFACRNGADFYGIPRNDG----ETVLKHETWEVPASYPFESGSLVPLRA 341
BLAST of mRNA_P-wetherbeei_contig10997.1.1 vs. uniprot
Match: F9UGJ3_9GAMM (Dihydroorotase n=7 Tax=Thiocapsa TaxID=1056 RepID=F9UGJ3_9GAMM) HSP 1 Score: 312 bits (800), Expect = 3.190e-103 Identity = 165/257 (64.20%), Postives = 192/257 (74.71%), Query Frame = 1
Query: 1 SPEEIREAKRSGLVVAAKLYPAGATTNSDSGVTDIELIRPVLQAMSEAGMPLLVHGEVTHDDVDVFDREERFVEEVLKPLIQSMPELKVVMEHITTRAAAAFVSSAPSTVAATVTPQHLLHNRGAIFRGGLRPHMYCLPILKREEDRKALVAAATSGSTKFFLGSDSAPHAEGAKLSACGCAGIFSGHAALELYAEVFEAAGALQHFAAFCSTNGADFYGLPRNAAGAAPTTTLRRAPWTVPATYLFGAARVVRTRA 771
SP EI AK SG V A KLYPAGATTNS++GVTD+ PV +AM A +PLLVHGEVT D VD+FDRE+RF+EE L+P++++ P LKVV EH+TT A FV P T+AAT+TP HLL+NR A+ GG+RPH+YCLPILKRE R ALV+AAT G +FFLG+DSAPHA K SACGCAG FS HAA+ELYAEVFE AGAL F S +GADFYGLPRNA T L R PWTVPA+Y FGA+RVV RA
Sbjct: 85 SPAEIGTAKASGQVFACKLYPAGATTNSENGVTDLLGRYPVFEAMQRAALPLLVHGEVTDDQVDIFDREQRFIEERLEPIVRAFPGLKVVFEHVTTAEAVDFVRDGPPTLAATITPHHLLYNRNAMLAGGIRPHLYCLPILKRERHRLALVSAATGGHPRFFLGTDSAPHAIEGKESACGCAGAFSAHAAIELYAEVFEQAGALARLEGFASHHGADFYGLPRNA----ETIRLSREPWTVPASYSFGASRVVPLRA 337
BLAST of mRNA_P-wetherbeei_contig10997.1.1 vs. uniprot
Match: A0A2P6TM20_CHLSO (Dihydroorotase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TM20_CHLSO) HSP 1 Score: 315 bits (806), Expect = 3.760e-103 Identity = 171/252 (67.86%), Postives = 194/252 (76.98%), Query Frame = 1
Query: 4 PEEIREAKRSGLVVAAKLYPAGATTNSDSGVTDIELIRPVLQAMSEAGMPLLVHGEVTHDDVDVFDREERFVEEVLKPLIQSMPELKVVMEHITTRAAAAFVSSAPSTVAATVTPQHLLHNRGAIFRGGLRPHMYCLPILKREEDRKALVAAATSGSTKFFLGSDSAPHAEGAKLSACGCAGIFSGHAALELYAEVFEAAGALQHFAAFCSTNGADFYGLPRNAAGAAPTTTLRRAPWTVPATYLFGAARVV 759
PE+ AK +G VVA KLYPAGATTNSDSGVTDI P L+AM+EAG+ LLVHGEVT +VD FDRE+ F+E LKPL+ +PEL+VVMEHITTR AA FV+SAP+ VAA+VTPQHLL NR A+F GGLRPH +CLPILKREE R A+ AAATSGS KFFLG+DSAPH + AK SACGCAG+FS AL LYA FE AGALQH AF S NG DFYGLPRN LRR PWTVPA+Y FG ++VV
Sbjct: 157 PEDAHRAKEAG-VVAFKLYPAGATTNSDSGVTDIGKCLPTLRAMAEAGLLLLVHGEVTDPEVDFFDREKVFIETKLKPLLDKVPELRVVMEHITTRDAAEFVASAPANVAASVTPQHLLLNRNALFVGGLRPHAFCLPILKREEHRAAVAAAATSGSRKFFLGTDSAPHPKHAKESACGCAGLFSAPVALPLYAHAFEQAGALQHLEAFASLNGPDFYGLPRNT----DKVVLRRQPWTVPASYAFGDSQVV 403
BLAST of mRNA_P-wetherbeei_contig10997.1.1 vs. uniprot
Match: A0A537D4W8_9PROT (Dihydroorotase n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537D4W8_9PROT) HSP 1 Score: 311 bits (797), Expect = 1.220e-102 Identity = 160/250 (64.00%), Postives = 191/250 (76.40%), Query Frame = 1
Query: 10 EIREAKRSGLVVAAKLYPAGATTNSDSGVTDIELIRPVLQAMSEAGMPLLVHGEVTHDDVDVFDREERFVEEVLKPLIQSMPELKVVMEHITTRAAAAFVSSAPSTVAATVTPQHLLHNRGAIFRGGLRPHMYCLPILKREEDRKALVAAATSGSTKFFLGSDSAPHAEGAKLSACGCAGIFSGHAALELYAEVFEAAGALQHFAAFCSTNGADFYGLPRNAAGAAPTTTLRRAPWTVPATYLFGAARVV 759
EI +A+RSG V+ K YPAGATTNS SGVT IE + PVL AM + +PLL+HGEVT +VD+FDRE FVE VL+P+++ P LKVV+EH+TTR AA F+++AP+ V AT+TPQHLLH+R A+ GG+RPH+YCLPILKRE R+ALV AATSG+ KFFLG+DSAPHA AK SACGCAG ++ HAALELYAE FE AGAL AF S +GADFYGLPRN T TL R WTVPA Y FG+ VV
Sbjct: 86 EIAQARRSGFVIGMKYYPAGATTNSASGVTAIERVYPVLDAMQKHALPLLIHGEVTAREVDIFDRERVFVESVLEPILRDFPALKVVLEHVTTREAAEFIAAAPAHVGATITPQHLLHSRNALLAGGIRPHLYCLPILKRESHRQALVKAATSGNPKFFLGTDSAPHARNAKQSACGCAGCYTAHAALELYAEAFETAGALDKLEAFASFHGADFYGLPRNG----DTVTLMREAWTVPAEYAFGSHAVV 331
BLAST of mRNA_P-wetherbeei_contig10997.1.1 vs. uniprot
Match: E1ZMJ7_CHLVA (Dihydroorotase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZMJ7_CHLVA) HSP 1 Score: 312 bits (799), Expect = 1.230e-102 Identity = 168/252 (66.67%), Postives = 195/252 (77.38%), Query Frame = 1
Query: 4 PEEIREAKRSGLVVAAKLYPAGATTNSDSGVTDIELIRPVLQAMSEAGMPLLVHGEVTHDDVDVFDREERFVEEVLKPLIQSMPELKVVMEHITTRAAAAFVSSAPSTVAATVTPQHLLHNRGAIFRGGLRPHMYCLPILKREEDRKALVAAATSGSTKFFLGSDSAPHAEGAKLSACGCAGIFSGHAALELYAEVFEAAGALQHFAAFCSTNGADFYGLPRNAAGAAPTTTLRRAPWTVPATYLFGAARVV 759
PEE+ AK +G VVA KLYPAGATTNSDSGVTD P L+AM+EAG+ LLVHGEVT +VD FDRE+ F+E LKPL+ +PEL+VVMEHITT AAAFV+++P++VAA+VTPQH+L NR A+F GGLRPH +CLPILKREE R A+ AAATSGS KFFLG+DSAPH + AK SACGCAG+FS AL LYA FE AGALQH AF + +G DFYGLPRN TLRR PWTVPATY FG + VV
Sbjct: 118 PEEVLRAKEAG-VVAFKLYPAGATTNSDSGVTDFRKCLPTLRAMAEAGLLLLVHGEVTDPEVDFFDREKVFIETKLKPLLDEVPELRVVMEHITTADAAAFVAASPASVAASVTPQHMLLNRNALFLGGLRPHAFCLPILKREEHRAAVAAAATSGSPKFFLGTDSAPHPKHAKESACGCAGLFSAPVALALYAHAFEQAGALQHLEAFAAFHGPDFYGLPRNT----DKITLRRQPWTVPATYQFGDSEVV 364
BLAST of mRNA_P-wetherbeei_contig10997.1.1 vs. uniprot
Match: A0A1H3HIA6_ALLWA (Dihydroorotase n=1 Tax=Allochromatium warmingii TaxID=61595 RepID=A0A1H3HIA6_ALLWA) HSP 1 Score: 309 bits (792), Expect = 5.920e-102 Identity = 166/259 (64.09%), Postives = 191/259 (73.75%), Query Frame = 1
Query: 1 SPEEIREAKRSGLVVAAKLYPAGATTNSDSGVTDIELIRPVLQAMSEAGMPLLVHGEVTHDDVDVFDREERFVEEVLKPLIQSMPELKVVMEHITTRAAAAFVSSAPSTVAATVTPQHLLHNRGAIFRGGLRPHMYCLPILKREEDRKALVAAATSGSTKFFLGSDSAPHAEGAKLSACGCAGIFSGHAALELYAEVFEAAGALQHFAAFCSTNGADFYGLPRNAAGAAPTTT--LRRAPWTVPATYLFGAARVVRTRA 771
+P+EI A+ SG VVA KLYPAGATTNSDSGVTDI + PVL+AM AG+PLLVHGEVT + VD+FDRE F+E VL+PL+ ++P LK+VMEH+TT A FV S P T+AAT+T HLL+NR A+F GGLRPH YCLP+LKRE R ALV AATSG +FFLG+DSAPHA K CGCAGIF+ HAALELYAEVFE A AL F S +GADFYGLPRN TT LRR PWTVP Y FG + VV RA
Sbjct: 85 TPDEIMRARESGAVVACKLYPAGATTNSDSGVTDIPRLTPVLEAMRAAGLPLLVHGEVTDETVDLFDREPVFIERVLRPLLTAVPGLKIVMEHVTTAEAVNFVRSGPETLAATITAHHLLYNRNALFAGGLRPHYYCLPVLKRERHRLALVEAATSGHRRFFLGTDSAPHALETKECGCGCAGIFTAHAALELYAEVFEQADALDRLEGFASLHGADFYGLPRN------TTRIHLRRDPWTVPERYRFGDSEVVPLRA 337 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10997.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10997.1.1 >prot_P-wetherbeei_contig10997.1.1 ID=prot_P-wetherbeei_contig10997.1.1|Name=mRNA_P-wetherbeei_contig10997.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp SPEEIREAKRSGLVVAAKLYPAGATTNSDSGVTDIELIRPVLQAMSEAGMback to top mRNA from alignment at P-wetherbeei_contig10997:5..1936- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10997.1.1 ID=mRNA_P-wetherbeei_contig10997.1.1|Name=mRNA_P-wetherbeei_contig10997.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1932bp|location=Sequence derived from alignment at P-wetherbeei_contig10997:5..1936- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10997:5..1936- >mRNA_P-wetherbeei_contig10997.1.1 ID=mRNA_P-wetherbeei_contig10997.1.1|Name=mRNA_P-wetherbeei_contig10997.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig10997:5..1936- (Phaeothamnion wetherbeei SAG_119_79)back to top |