mRNA_P-wetherbeei_contig10989.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10989.1.2 vs. uniprot
Match: A0A6A1UNY8_9ROSI (Uncharacterized protein n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1UNY8_9ROSI) HSP 1 Score: 70.5 bits (171), Expect = 7.000e-11 Identity = 42/98 (42.86%), Postives = 57/98 (58.16%), Query Frame = 3
Query: 273 ARARKLHPPLMVAAALFAAVFGTQGGIGALLLADHPLLDSGHAATSGYLVALLATQALLGNVMGQNSTARTAHAAVGAGAVGLLLVHAGLGLKLGFSF 566
A A+ LHP L+ F A+ G GG+ +LL +D P+ +S HA T +ALLA Q+ L + N R H +G G + L L+HA LGL+LGFSF
Sbjct: 157 AIAKDLHPKLLGGMFFFFAL-GATGGVISLLTSDKPIFESPHAVTGIIGLALLAMQSTLPALFENNPELRNVHGILGGGIMSLFLIHAALGLRLGFSF 253
BLAST of mRNA_P-wetherbeei_contig10989.1.2 vs. uniprot
Match: A0A0K9QWZ2_SPIOL (Uncharacterized protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QWZ2_SPIOL) HSP 1 Score: 70.5 bits (171), Expect = 8.150e-11 Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 3
Query: 273 ARARKLHPPLMVAAALFAAVFGTQGGIGALLLADHPLLDSGHAATSGYLVALLATQALLGNVMGQNSTARTAHAAVGAGAVGLLLVHAGLGLKLGFSF 566
A+A+ LHP L+ +F + G GG+ +LL +D P+ DS HA T +ALL Q L + N R H +G+G + L +VHA LGL+LGFS+
Sbjct: 170 AKAKDLHPKLLAGMFIFFGL-GATGGVTSLLTSDRPIFDSPHAVTGLIGLALLTIQTTLPTLFEGNPGLRNVHGILGSGIMTLFVVHAALGLQLGFSY 266
BLAST of mRNA_P-wetherbeei_contig10989.1.2 vs. uniprot
Match: A0A2V0P790_9CHLO (Translation initiation factor n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P790_9CHLO) HSP 1 Score: 69.3 bits (168), Expect = 1.000e-10 Identity = 39/97 (40.21%), Postives = 61/97 (62.89%), Query Frame = 3
Query: 273 ARARKLHPPLMVAAALFAAVFGTQGGIGALLLADHPLLDSGHAATSGYLVALLATQALLGNVMGQNSTARTAHAAVGAGAVGLLLVHAGLGLKLGFS 563
A+A+ LHP L+ A +F A+ G GG +L++ P+ +S H T+ + + LLA QA+L ++ +RT HA G G +GL+L+HAGLG++L S
Sbjct: 114 AKAKDLHPKLLGGAFVFFAL-GATGGCMSLIMQGKPIFESAHVTTALWGLTLLAFQAMLPLFFDESPGSRTVHAFFGTGIMGLMLIHAGLGVQLALS 209
BLAST of mRNA_P-wetherbeei_contig10989.1.2 vs. uniprot
Match: A0A1S2Z6H2_CICAR (uncharacterized protein LOC101490805 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2Z6H2_CICAR) HSP 1 Score: 68.9 bits (167), Expect = 2.300e-10 Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 3
Query: 273 ARARKLHPPLMVAAALFAAVFGTQGGIGALLLADHPLLDSGHAATSGYLVALLATQALLGNVMGQNSTARTAHAAVGAGAVGLLLVHAGLGLKLGFS 563
A+A+ LHP L+ F A+ G GG+ +LL +D P+ +S HA T +ALL Q +L ++ N R H +G+ + L LVHA LGL+LGFS
Sbjct: 150 AKAKDLHPKLLAGMFFFFAL-GATGGVTSLLTSDKPIFESPHAVTGVIGLALLTIQTILPSLFEGNPGLRNVHGILGSSIMTLFLVHAALGLQLGFS 245
BLAST of mRNA_P-wetherbeei_contig10989.1.2 vs. uniprot
Match: A0A7S4GID7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GID7_9EUGL) HSP 1 Score: 65.1 bits (157), Expect = 7.570e-9 Identity = 48/100 (48.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query: 273 ARARKLHPPLM-VAAALFAAVFGTQGGIGALLLADHPLLDSGHAATSGYLVALLATQALLGNVMG-QNS-TARTAHAAVGAGAVGLLLVHAGLGLKLGFS 563
A A HP LM + LFA G QGG+ L PL S H+ T + LL Q +LG VM QNS T RTAH +G+ + LLL+HAGLGLKLG S
Sbjct: 181 ALAGASHPALMGLMTVLFA--LGGQGGLLFTLYEGRPLFSSEHSVTGVAGITLLLAQGVLGKVMKVQNSDTLRTAHTVIGSAIMILLLIHAGLGLKLGLS 278
BLAST of mRNA_P-wetherbeei_contig10989.1.2 vs. uniprot
Match: A0A834H810_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834H810_RHOSS) HSP 1 Score: 63.2 bits (152), Expect = 4.050e-8 Identity = 43/118 (36.44%), Postives = 58/118 (49.15%), Query Frame = 3
Query: 273 ARARKLHPPLMVAAALFAAVFGTQGGIGALLLADHPLLDSGHAATSGYLVALLATQALLG--------------------NVMGQNSTARTAHAAVGAGAVGLLLVHAGLGLKLGFSF 566
A A+ LHP L+ F A+ G GG+ +LL +D P+ +S HA T +ALL Q +L N M N R H +G+G + L LVHA LGL+LGFS+
Sbjct: 181 ATAKDLHPKLLAGMFFFFAL-GATGGVTSLLTSDKPIFESPHAVTGSIGLALLTIQTILPTLFEELEYFLSRLIFGFELPNPMQGNPGLRNVHGILGSGIMTLFLVHAALGLQLGFSY 297
BLAST of mRNA_P-wetherbeei_contig10989.1.2 vs. uniprot
Match: UPI00140BD85F (DUF4079 domain-containing protein n=1 Tax=Aphanocapsa montana TaxID=327565 RepID=UPI00140BD85F) HSP 1 Score: 58.9 bits (141), Expect = 2.750e-7 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 3
Query: 306 VAAALFAAV-FGTQGGIGALLLADHPLLDSGHAATSGYLVALLATQALLGNV-MGQNSTARTAHAAVGAGAVGLLLVHAGLGLKLGFS 563
VA +FA + G GGI +L++ PLL S H T ++ LLA+ LL + GQ T RT HA +G+ A+G+ +VHA LG++LG S
Sbjct: 75 VAPLMFAFIAMGYTGGILSLVMQKQPLLSSPHFWTGTAIIGLLASNGLLAAMKFGQGGTLRTVHAYLGSVALGVFVVHAVLGVRLGLS 162
BLAST of mRNA_P-wetherbeei_contig10989.1.2 vs. uniprot
Match: K9TII7_9CYAN (Uncharacterized protein n=2 Tax=Oscillatoriaceae TaxID=1892254 RepID=K9TII7_9CYAN) HSP 1 Score: 58.5 bits (140), Expect = 3.590e-7 Identity = 40/95 (42.11%), Postives = 53/95 (55.79%), Query Frame = 3
Query: 282 RKLHPPLMVAAALFAAVFGTQGGIGALLLADHPLLDSGHAATSGYLVALLATQALLG-NVMGQNSTARTAHAAVGAGAVGLLLVHAGLGLKLGFS 563
RKL P + + AL G GG+ +L++ P+L+S H T L+ LLA L G T R AHA +G A+GL+L+HA LGLKLG S
Sbjct: 68 RKLAPWMFLFMAL-----GYTGGVLSLVMQRQPILESPHFWTGSILLVLLALNGTLSLGFQGDRLTLRAAHAYIGTVALGLMLLHALLGLKLGLS 157
BLAST of mRNA_P-wetherbeei_contig10989.1.2 vs. uniprot
Match: A0A8J7BQD2_9CYAN (DUF4079 domain-containing protein n=3 Tax=unclassified Trichocoleus TaxID=2628910 RepID=A0A8J7BQD2_9CYAN) HSP 1 Score: 57.8 bits (138), Expect = 6.590e-7 Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 3
Query: 270 AARARKLHPPLMVAAALFAAVFGTQGGIGALLLADHPLLDSGHAATSGYLVALLATQALLGNV-MGQNSTARTAHAAVGAGAVGLLLVHAGLGLKLGFS 563
A ++R HP + LF A+ G GG+ +L++ P+L+S H T +++LLA ++ G N + R HA +G+ A+ L+LVHAGLGLKLG S
Sbjct: 60 ADQSRNAHPKIAGWMFLFMAL-GFTGGVLSLVMQQQPVLESPHFWTGLVVLSLLAFNGVIALAGFGGNKSLRIVHALLGSIALLLMLVHAGLGLKLGLS 157
BLAST of mRNA_P-wetherbeei_contig10989.1.2 vs. uniprot
Match: A0A8K1ZVY9_9CYAN (DUF4079 family protein n=1 Tax=Petrachloros mirabilis ULC683 TaxID=2781853 RepID=A0A8K1ZVY9_9CYAN) HSP 1 Score: 56.6 bits (135), Expect = 1.820e-6 Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 3
Query: 330 VFGTQGGIGALLLADHPLLDSGHAATSGYLVALLATQALLG-NVMGQNSTARTAHAAVGAGAVGLLLVHAGLGLKLGFS 563
V G GGI +L++ + P+L+S H + ++ LL A L G + RTAHA +G+ A+G+L++H LGLKLGF+
Sbjct: 82 VLGYTGGILSLVMQEQPILESPHFWSGSTVIGLLGINAALSLTKFGGQGSLRTAHAYLGSVALGVLVIHTLLGLKLGFT 160 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10989.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10989.1.2 >prot_P-wetherbeei_contig10989.1.2 ID=prot_P-wetherbeei_contig10989.1.2|Name=mRNA_P-wetherbeei_contig10989.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=160bp MICLVLPLAAYGVSLGLQIRVARLAASAVAASVADFEGMENVAAAAAAKAback to top mRNA from alignment at P-wetherbeei_contig10989:806..2041- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10989.1.2 ID=mRNA_P-wetherbeei_contig10989.1.2|Name=mRNA_P-wetherbeei_contig10989.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1236bp|location=Sequence derived from alignment at P-wetherbeei_contig10989:806..2041- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10989:806..2041- >mRNA_P-wetherbeei_contig10989.1.2 ID=mRNA_P-wetherbeei_contig10989.1.2|Name=mRNA_P-wetherbeei_contig10989.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=480bp|location=Sequence derived from alignment at P-wetherbeei_contig10989:806..2041- (Phaeothamnion wetherbeei SAG_119_79)back to top |