mRNA_P-wetherbeei_contig10987.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10987.1.1
Unique NamemRNA_P-wetherbeei_contig10987.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10987.1.1 vs. uniprot
Match: A0A0Q7U1D6_9HYPH (MBL fold metallo-hydrolase n=4 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A0Q7U1D6_9HYPH)

HSP 1 Score: 426 bits (1095), Expect = 6.420e-149
Identity = 203/243 (83.54%), Postives = 219/243 (90.12%), Query Frame = 1
Query:    1 MADDIPFDKNLDLAPDTVDTPMPGVRRVMANNPGPFTFKGTISYIIGTGKVAIVDPGPADEAHIGALLDAVRGETVTHIFVTHTHRDHSPAVPAVKHATGATVYAEGIHRAARPLHIGENNPLDSSGDRDFVPDVYLKDGDIVKGDGWTIEAVTTPGHTANHMAYAYKEANALFIGDHVMAWATTIVAPPDGAMSDYMASLHKLAKRSEQVYFPGHGPAIGDANRFVNYYILHRTARAAALLH 729
            MA+DIP++K+LDLAPDTVD   PGVRRVMANNPGPFTFKGT+SYIIG GKVAIVDPGP D AH+ ALLDAV  ETVTHIFVTHTHRDHSPAVPA+KHATGATVYAEG+HRAARPLHIGE NPLDSSGDRDFVPDVYLKDG+IV+GDGW +E VTTPGHTANHMA+A K AN+LF GDHVMAWAT+IVAPPDGAMSDYMASL KLA R EQ YFPGHGPAI DA RFVNYYILHR AR  ++LH
Sbjct:    1 MAEDIPYNKSLDLAPDTVDEVAPGVRRVMANNPGPFTFKGTVSYIIGKGKVAIVDPGPDDPAHVAALLDAVHNETVTHIFVTHTHRDHSPAVPAIKHATGATVYAEGVHRAARPLHIGELNPLDSSGDRDFVPDVYLKDGEIVEGDGWAVEGVTTPGHTANHMAFALKGANSLFAGDHVMAWATSIVAPPDGAMSDYMASLRKLAARPEQTYFPGHGPAIPDAVRFVNYYILHRLAREDSILH 243          
BLAST of mRNA_P-wetherbeei_contig10987.1.1 vs. uniprot
Match: A0A346A2N8_9HYPH (MBL fold metallo-hydrolase n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A2N8_9HYPH)

HSP 1 Score: 421 bits (1082), Expect = 5.910e-147
Identity = 201/243 (82.72%), Postives = 216/243 (88.89%), Query Frame = 1
Query:    1 MADDIPFDKNLDLAPDTVDTPMPGVRRVMANNPGPFTFKGTISYIIGTGKVAIVDPGPADEAHIGALLDAVRGETVTHIFVTHTHRDHSPAVPAVKHATGATVYAEGIHRAARPLHIGENNPLDSSGDRDFVPDVYLKDGDIVKGDGWTIEAVTTPGHTANHMAYAYKEANALFIGDHVMAWATTIVAPPDGAMSDYMASLHKLAKRSEQVYFPGHGPAIGDANRFVNYYILHRTARAAALLH 729
            M+DDIPF+K L+LAPD VD PMPGVRRVMANNPGPFTFKGT+SYIIG G VAIVDPGP D AHIGALLDAVRGETVTHIFVTHTHRDHSPA PAVKHATGATVYAEG HR AR LHIGENNPLDSSGDRDF PDV LKDGD+V GDGWTIE V TPGHTANHMA+A+KE N LF GDHVM WAT+IVAPPDGAMSDYMASL+KLA+R E+ YFPGHGPAI +A RFVNYYILHR AR  ++L+
Sbjct:    1 MSDDIPFNKKLELAPDIVDEPMPGVRRVMANNPGPFTFKGTLSYIIGKGNVAIVDPGPDDPAHIGALLDAVRGETVTHIFVTHTHRDHSPATPAVKHATGATVYAEGPHRPARALHIGENNPLDSSGDRDFRPDVQLKDGDVVSGDGWTIEGVFTPGHTANHMAFAWKEKNVLFAGDHVMGWATSIVAPPDGAMSDYMASLNKLAQRGEETYFPGHGPAIPEAKRFVNYYILHRKAREDSILY 243          
BLAST of mRNA_P-wetherbeei_contig10987.1.1 vs. uniprot
Match: A0A1Q4DKM5_9HYPH (MBL fold metallo-hydrolase n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DKM5_9HYPH)

HSP 1 Score: 394 bits (1013), Expect = 1.950e-136
Identity = 186/243 (76.54%), Postives = 212/243 (87.24%), Query Frame = 1
Query:    1 MADDIPFDKNLDLAPDTVDTPMPGVRRVMANNPGPFTFKGTISYIIGTGKVAIVDPGPADEAHIGALLDAVRGETVTHIFVTHTHRDHSPAVPAVKHATGATVYAEGIHRAARPLHIGENNPLDSSGDRDFVPDVYLKDGDIVKGDGWTIEAVTTPGHTANHMAYAYKEANALFIGDHVMAWATTIVAPPDGAMSDYMASLHKLAKRSEQVYFPGHGPAIGDANRFVNYYILHRTARAAALLH 729
            MA+DIPF+K LDLAP+TVD P+PGVRRVM +NPGPFTFKGT+SYIIG GKVAI+DPGP DE H+ ALLDAVRGETVTHI VTHTHRDHSPAVPA+K ATGATVYAEG HRAARPLHIGE +PLDSSGDRDF PD+ + DGD+++GDGW +E+V TPGHTANHMA+A KE + LF GDHVM W+T+IVAPPDGAMSDYM SL KL++R EQ+YFPGHGPAI DA RFV YY LHR AR  ++LH
Sbjct:    1 MAEDIPFNKKLDLAPETVDEPVPGVRRVMCDNPGPFTFKGTMSYIIGRGKVAIIDPGPDDERHVKALLDAVRGETVTHIVVTHTHRDHSPAVPAIKAATGATVYAEGPHRAARPLHIGEIHPLDSSGDRDFRPDIAVADGDVIEGDGWALESVATPGHTANHMAFALKERDILFAGDHVMGWSTSIVAPPDGAMSDYMGSLSKLSERPEQLYFPGHGPAIPDAVRFVAYYRLHRRAREDSILH 243          
BLAST of mRNA_P-wetherbeei_contig10987.1.1 vs. uniprot
Match: A0A127ES03_9HYPH (Metallo-beta-lactamase superfamily protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127ES03_9HYPH)

HSP 1 Score: 368 bits (945), Expect = 4.160e-126
Identity = 174/242 (71.90%), Postives = 198/242 (81.82%), Query Frame = 1
Query:    1 MADDIPFDKNLDLAPDTVDTPMPGVRRVMANNPGPFTFKGTISYIIGTGKVAIVDPGPADEAHIGALLDAVRGETVTHIFVTHTHRDHSPAVPAVKHATGATVYAEGIHRAARPLHIGENNPLDSSGDRDFVPDVYLKDGDIVKGDGWTIEAVTTPGHTANHMAYAYKEANALFIGDHVMAWATTIVAPPDGAMSDYMASLHKLAKRSEQVYFPGHGPAIGDANRFVNYYILHRTARAAALL 726
            MA+DIPFDK   L P  VD PMPGVRR++ NNP  FTFKGT+SYIIG GKVAIVDPGP +  H  ALLDAVRGETVTHIFVTHTHRDHSP VPA+KHATGA V AEG HRAARPLHIG+   LD+S D DF PD  L DG++V+GDGWTIEA+TTPGHTANHMAYA++EAN +  GDHVMAW+T +V+PPDG+M DYM+SL KLAKR E +YFPGHGPA+  A RFV  YILHR AR A++L
Sbjct:    1 MAEDIPFDKEFTLVPGKVDEPMPGVRRILCNNPSAFTFKGTMSYIIGRGKVAIVDPGPDNPEHGAALLDAVRGETVTHIFVTHTHRDHSPGVPAIKHATGALVLAEGPHRAARPLHIGDGPRLDASNDTDFRPDRALADGEVVRGDGWTIEAITTPGHTANHMAYAFREANVVLSGDHVMAWSTPVVSPPDGSMGDYMSSLQKLAKREEPIYFPGHGPAVRSAPRFVAAYILHRKAREASIL 242          
BLAST of mRNA_P-wetherbeei_contig10987.1.1 vs. uniprot
Match: A0A1Q3W1Y5_9BRAD (MBL fold metallo-hydrolase n=1 Tax=Afipia sp. 64-13 TaxID=1895701 RepID=A0A1Q3W1Y5_9BRAD)

HSP 1 Score: 361 bits (926), Expect = 3.840e-123
Identity = 167/241 (69.29%), Postives = 195/241 (80.91%), Query Frame = 1
Query:    7 DDIPFDKNLDLAPDTVDTPMPGVRRVMANNPGPFTFKGTISYIIGTGKVAIVDPGPADEAHIGALLDAVRGETVTHIFVTHTHRDHSPAVPAVKHATGATVYAEGIHRAARPLHIGENNPLDSSGDRDFVPDVYLKDGDIVKGDGWTIEAVTTPGHTANHMAYAYKEANALFIGDHVMAWATTIVAPPDGAMSDYMASLHKLAKRSEQVYFPGHGPAIGDANRFVNYYILHRTARAAALLH 729
            DDIPF++N  L P  VD P+PGVRR++ NNPGPFTF GT+SYI+G GKVAI+DPGPAD+AH+ ALL AVRGETVTHI VTHTH DHSP VP +K ATGATVYAEG HRA+RP+H GE    +S  DRDF PDV LKDGD+V GDGW +EAVTTPGHTANHMA+A+ E    FIGDHVM W+T+IV+PPDG+M DYMASL KL +R EQ+YF GHGP I DA RFV++ I HR AR A++LH
Sbjct:    5 DDIPFNRNFPLVPGVVDEPVPGVRRLLCNNPGPFTFTGTLSYIVGRGKVAIIDPGPADDAHLDALLHAVRGETVTHILVTHTHLDHSPGVPRIKEATGATVYAEGPHRASRPVHAGETRKTESGADRDFRPDVQLKDGDVVTGDGWALEAVTTPGHTANHMAFAWPERGVTFIGDHVMGWSTSIVSPPDGSMVDYMASLEKLTRRGEQLYFSGHGPEIPDAVRFVHFLIRHRKAREASILH 245          
BLAST of mRNA_P-wetherbeei_contig10987.1.1 vs. uniprot
Match: A0A1Q7BZZ5_9PROT (MBL fold metallo-hydrolase n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BZZ5_9PROT)

HSP 1 Score: 355 bits (910), Expect = 8.450e-121
Identity = 166/242 (68.60%), Postives = 199/242 (82.23%), Query Frame = 1
Query:    1 MADDIPFDKNLDLAPDTVDTPMPGVRRVMANNPGPFTFKGTISYIIGTGKVAIVDPGPADEAHIGALLDAVRGETVTHIFVTHTHRDHSPAVPAVKHATGATVYAEGIHRAARPLHIGENNPLDSSGDRDFVPDVYLKDGDIVKGDGWTIEAVTTPGHTANHMAYAYKEANALFIGDHVMAWATTIVAPPDGAMSDYMASLHKLAKRSEQVYFPGHGPAIGDANRFVNYYILHRTARAAALL 726
            M+ ++PFD++ DL P TV+  +PGVRR++ANNPGPFTFKGT+SYI+G G+VAI+DPGP DE HI ALLDAVRGETVTHIFVTHTHRDHSPAVP +K ATGA V AEG HRAARPLH+GE   +++S D +F PD  L DG++V G  WTIEAV TPGHTANHMA+A+KEA+ LF GDHVMAW+T +VAPPDGAMSDY+ASL KLA+RSE +Y PGHG  + +A RFV +YI HR  R AA+L
Sbjct:    1 MSAELPFDRSFDLPPGTVEEVVPGVRRLLANNPGPFTFKGTVSYIVGRGQVAIIDPGPLDETHIAALLDAVRGETVTHIFVTHTHRDHSPAVPRIKAATGALVLAEGAHRAARPLHVGEAPRMEASNDTEFRPDRTLADGEVVTGSDWTIEAVATPGHTANHMAFAFKEADLLFSGDHVMAWSTPVVAPPDGAMSDYVASLQKLARRSEPIYLPGHGGMVREAPRFVQHYIQHRQNREAAIL 242          
BLAST of mRNA_P-wetherbeei_contig10987.1.1 vs. uniprot
Match: A0A537TXX5_9PROT (MBL fold metallo-hydrolase n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537TXX5_9PROT)

HSP 1 Score: 354 bits (909), Expect = 1.200e-120
Identity = 171/242 (70.66%), Postives = 195/242 (80.58%), Query Frame = 1
Query:    1 MADDIPFDKNLDLAPDTVDTPMPGVRRVMANNPGPFTFKGTISYIIGTGKVAIVDPGPADEAHIGALLDAVRGETVTHIFVTHTHRDHSPAVPAVKHATGATVYAEGIHRAARPLHIGENNPLDSSGDRDFVPDVYLKDGDIVKGDGWTIEAVTTPGHTANHMAYAYKEANALFIGDHVMAWATTIVAPPDGAMSDYMASLHKLAKRSEQVYFPGHGPAIGDANRFVNYYILHRTARAAALL 726
            M+ DIPFDK+ DL P+TV   MPGVRR++ANNPGPFTFKGT+SYI+G  +VAIVDPGP D+ HI ALLDAVRGETVTHIFVTHTHRDHSPAVP +K ATGA V AEG HR AR L+IGE   LD+S D DF PD  L DG+++ G GWTIEAV TPGHTANHMA+A KEA+ LF GDHVMAW+T +VAPPDGAMSDYMASL KLA+RSE +Y PGHG A+ DA +FV  YI HR  R  A+L
Sbjct:    1 MSADIPFDKSFDLVPETVQEVMPGVRRLLANNPGPFTFKGTVSYIVGRDQVAIVDPGPLDDTHIAALLDAVRGETVTHIFVTHTHRDHSPAVPRIKAATGAVVLAEGAHRPARALNIGEAPRLDASNDTDFRPDRTLADGEVIPGAGWTIEAVATPGHTANHMAFALKEADLLFSGDHVMAWSTPVVAPPDGAMSDYMASLQKLARRSESLYLPGHGGAVRDAPQFVQAYIRHRERRETAIL 242          
BLAST of mRNA_P-wetherbeei_contig10987.1.1 vs. uniprot
Match: B6JFL1_AFIC5 (Putative beta-lactamase n=1 Tax=Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) TaxID=504832 RepID=B6JFL1_AFIC5)

HSP 1 Score: 353 bits (905), Expect = 5.980e-120
Identity = 163/243 (67.08%), Postives = 198/243 (81.48%), Query Frame = 1
Query:    1 MADDIPFDKNLDLAPDTVDTPMPGVRRVMANNPGPFTFKGTISYIIGTGKVAIVDPGPADEAHIGALLDAVRGETVTHIFVTHTHRDHSPAVPAVKHATGATVYAEGIHRAARPLHIGENNPLDSSGDRDFVPDVYLKDGDIVKGDGWTIEAVTTPGHTANHMAYAYKEANALFIGDHVMAWATTIVAPPDGAMSDYMASLHKLAKRSEQVYFPGHGPAIGDANRFVNYYILHRTARAAALLH 729
            + +DIPF++N  L P  VD P+PGVRRV+ +NPGPFTF GT+SYI+G G+VAIVDPGP D+AHI ALLDAVRGETVTHIFVTHTHRDHSPAVP ++ ATGA+VYAEG HRAARP+H GE      S D DF PDV L DG++V G+GW+++AVTTPGHTANHMA+A++E + +F+GDHVM W+TTIV PPDGAM D+MASL KLA R E++YFPGHGP I D  RF ++ I HR AR A++LH
Sbjct:    3 LDNDIPFNRNFPLKPGVVDRPVPGVRRVLCDNPGPFTFTGTVSYIVGEGRVAIVDPGPDDDAHIAALLDAVRGETVTHIFVTHTHRDHSPAVPKIRQATGASVYAEGPHRAARPMHEGEPPRNKESNDLDFRPDVALTDGEVVSGEGWSLQAVTTPGHTANHMAFAWRERSLIFVGDHVMGWSTTIVVPPDGAMIDFMASLEKLAARPERLYFPGHGPEIEDGPRFADFMIRHRRAREASILH 245          
BLAST of mRNA_P-wetherbeei_contig10987.1.1 vs. uniprot
Match: A0A6L5FJZ2_9HYPH (MBL fold metallo-hydrolase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FJZ2_9HYPH)

HSP 1 Score: 352 bits (903), Expect = 1.430e-119
Identity = 171/242 (70.66%), Postives = 190/242 (78.51%), Query Frame = 1
Query:    1 MADDIPFDKNLDLAPDTVDTPMPGVRRVMANNPGPFTFKGTISYIIGTGKVAIVDPGPADEAHIGALLDAVRGETVTHIFVTHTHRDHSPAVPAVKHATGATVYAEGIHRAARPLHIGENNPLDSSGDRDFVPDVYLKDGDIVKGDGWTIEAVTTPGHTANHMAYAYKEANALFIGDHVMAWATTIVAPPDGAMSDYMASLHKLAKRSEQVYFPGHGPAIGDANRFVNYYILHRTARAAALL 726
            MADDI FDK  DLA   V+  MPGVRR++ NNP PFTFKGT+SYI+G GKVAIVDPGP D AH+ ALLDAVRGETVTHIFVTHTHRDHSPAVPAVK ATGATVYAEG HR +R +H+GE   LD+SGD DF PDV L DG+ V  + WT EAVTTPGHT NHMA+A KE NA+FIGDHVMAW+T+IVAPPDG+M DYMASL KL  R E VY PGHG  I DA  FV  YI HR  R  ++L
Sbjct:    5 MADDIVFDKRFDLAAGVVEEVMPGVRRILCNNPSPFTFKGTVSYIVGKGKVAIVDPGPDDSAHVAALLDAVRGETVTHIFVTHTHRDHSPAVPAVKAATGATVYAEGPHRPSREVHLGEAPRLDASGDFDFRPDVMLADGETVASEDWTFEAVTTPGHTKNHMAFALKEVNAMFIGDHVMAWSTSIVAPPDGSMGDYMASLEKLTPRGETVYLPGHGGLINDAPTFVAQYIRHRKGREDSIL 246          
BLAST of mRNA_P-wetherbeei_contig10987.1.1 vs. uniprot
Match: A0A1W6ZSP8_9HYPH (MBL fold metallo-hydrolase n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZSP8_9HYPH)

HSP 1 Score: 350 bits (899), Expect = 4.260e-119
Identity = 168/243 (69.14%), Postives = 192/243 (79.01%), Query Frame = 1
Query:    1 MADDIPFDKNLDLAPDTVDTPMPGVRRVMANNPGPFTFKGTISYIIGTGKVAIVDPGPADEAHIGALLDAVRGETVTHIFVTHTHRDHSPAVPAVKHATGATVYAEGIHRAARPLHIGENNPLDSSGDRDFVPDVYLKDGDIVKGDGWTIEAVTTPGHTANHMAYAYKEANALFIGDHVMAWATTIVAPPDGAMSDYMASLHKLAKRSEQVYFPGHGPAIGDANRFVNYYILHRTARAAALLH 729
            M DDIPFDK+ DL P  +    P VR + A N GPFTFKGT+SYI+G G VAI+DPGP D  HIGALL AVR ETVTHI +THTHRDHSPA  A++ ATGA  Y EG HRA+RPLHIGE NPLD++GD DF PD  L DG+I++G+GWT+EAVTTPGH ANHMAYA KE NALF GDHVM W+T+IVAPPDGAMSDYMASL+KLAKRSE+VYFPGHG  I +A RFV  YI HR  R  ++LH
Sbjct:    1 MNDDIPFDKSFDLEPGVLKDIAPKVRALCAGNAGPFTFKGTVSYIVGRGNVAIIDPGPDDPVHIGALLKAVRDETVTHIILTHTHRDHSPAAAAIRAATGAKTYGEGPHRASRPLHIGEINPLDAAGDTDFHPDHKLADGEIIEGEGWTLEAVTTPGHCANHMAYALKETNALFSGDHVMGWSTSIVAPPDGAMSDYMASLYKLAKRSEEVYFPGHGNMIREAPRFVQSYIRHRLGREESILH 243          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10987.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0Q7U1D6_9HYPH6.420e-14983.54MBL fold metallo-hydrolase n=4 Tax=unclassified Ps... [more]
A0A346A2N8_9HYPH5.910e-14782.72MBL fold metallo-hydrolase n=1 Tax=Pseudolabrys ta... [more]
A0A1Q4DKM5_9HYPH1.950e-13676.54MBL fold metallo-hydrolase n=1 Tax=Rhizobiales bac... [more]
A0A127ES03_9HYPH4.160e-12671.90Metallo-beta-lactamase superfamily protein n=1 Tax... [more]
A0A1Q3W1Y5_9BRAD3.840e-12369.29MBL fold metallo-hydrolase n=1 Tax=Afipia sp. 64-1... [more]
A0A1Q7BZZ5_9PROT8.450e-12168.60MBL fold metallo-hydrolase n=1 Tax=Alphaproteobact... [more]
A0A537TXX5_9PROT1.200e-12070.66MBL fold metallo-hydrolase n=4 Tax=Alphaproteobact... [more]
B6JFL1_AFIC55.980e-12067.08Putative beta-lactamase n=1 Tax=Afipia carboxidovo... [more]
A0A6L5FJZ2_9HYPH1.430e-11970.66MBL fold metallo-hydrolase n=1 Tax=Hyphomicrobiale... [more]
A0A1W6ZSP8_9HYPH4.260e-11969.14MBL fold metallo-hydrolase n=1 Tax=Pseudorhodoplan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10987contigP-wetherbeei_contig10987:1..729 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog504832.OCAR_6918
Preferred nameMA20_07390
PFAMsLactamase_B
Model size729
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00004,RC00137
KEGG koko:K01069
KEGG ReactionR01736
KEGG Pathwayko00620,map00620
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.8e-121
EggNOG OGsCOG0491@1|root,COG0491@2|Bacteria,1MVC3@1224|Proteobacteria,2TUAZ@28211|Alphaproteobacteria,3JRMU@41294|Bradyrhizobiaceae
EC3.1.2.6
DescriptionMetallo-beta-lactamase superfamily
Cds size729
COG categoryS
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185892.9466405-CDS-P-wetherbeei_contig10987:0..7291683185892.9466405-CDS-P-wetherbeei_contig10987:0..729Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10987 1..729 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10987.1.1prot_P-wetherbeei_contig10987.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10987 1..729 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10987.1.1

>prot_P-wetherbeei_contig10987.1.1 ID=prot_P-wetherbeei_contig10987.1.1|Name=mRNA_P-wetherbeei_contig10987.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=243bp
MADDIPFDKNLDLAPDTVDTPMPGVRRVMANNPGPFTFKGTISYIIGTGK
VAIVDPGPADEAHIGALLDAVRGETVTHIFVTHTHRDHSPAVPAVKHATG
ATVYAEGIHRAARPLHIGENNPLDSSGDRDFVPDVYLKDGDIVKGDGWTI
EAVTTPGHTANHMAYAYKEANALFIGDHVMAWATTIVAPPDGAMSDYMAS
LHKLAKRSEQVYFPGHGPAIGDANRFVNYYILHRTARAAALLH
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mRNA from alignment at P-wetherbeei_contig10987:1..729-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10987.1.1 ID=mRNA_P-wetherbeei_contig10987.1.1|Name=mRNA_P-wetherbeei_contig10987.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=729bp|location=Sequence derived from alignment at P-wetherbeei_contig10987:1..729- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGACGACATTCCCTTCGACAAGAATCTCGACCTCGCGCCGGACAC GGTGGACACACCGATGCCCGGCGTGCGCAGGGTCATGGCCAACAATCCGG GCCCGTTCACCTTCAAGGGCACGATCAGCTACATCATAGGCACCGGCAAG GTCGCCATCGTCGATCCCGGCCCGGCCGATGAGGCGCATATCGGCGCGTT GCTGGATGCCGTGCGCGGCGAGACGGTGACGCATATTTTCGTCACCCACA CCCACCGCGACCATTCGCCGGCGGTTCCGGCGGTCAAGCACGCCACCGGC GCCACGGTCTATGCTGAAGGCATTCACCGCGCGGCGCGGCCTTTGCATAT CGGCGAGAACAACCCGCTCGATTCCAGCGGCGACCGCGATTTCGTGCCGG ACGTCTATTTGAAGGACGGCGACATCGTCAAAGGCGACGGCTGGACGATC GAGGCGGTGACCACGCCCGGCCACACCGCCAACCACATGGCCTATGCCTA CAAGGAAGCCAACGCGCTGTTCATCGGCGATCATGTAATGGCGTGGGCGA CCACCATTGTCGCGCCGCCGGACGGCGCGATGAGCGACTACATGGCCTCG CTGCACAAGCTGGCCAAACGCTCCGAGCAGGTCTATTTCCCCGGTCATGG CCCGGCCATCGGCGACGCCAACCGCTTCGTCAATTATTACATTCTGCACC GCACGGCTCGCGCAGCCGCGCTCCTCCAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10987:1..729-

>mRNA_P-wetherbeei_contig10987.1.1 ID=mRNA_P-wetherbeei_contig10987.1.1|Name=mRNA_P-wetherbeei_contig10987.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=729bp|location=Sequence derived from alignment at P-wetherbeei_contig10987:1..729- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGACGACATTCCCTTCGACAAGAATCTCGACCTCGCGCCGGACAC
GGTGGACACACCGATGCCCGGCGTGCGCAGGGTCATGGCCAACAATCCGG
GCCCGTTCACCTTCAAGGGCACGATCAGCTACATCATAGGCACCGGCAAG
GTCGCCATCGTCGATCCCGGCCCGGCCGATGAGGCGCATATCGGCGCGTT
GCTGGATGCCGTGCGCGGCGAGACGGTGACGCATATTTTCGTCACCCACA
CCCACCGCGACCATTCGCCGGCGGTTCCGGCGGTCAAGCACGCCACCGGC
GCCACGGTCTATGCTGAAGGCATTCACCGCGCGGCGCGGCCTTTGCATAT
CGGCGAGAACAACCCGCTCGATTCCAGCGGCGACCGCGATTTCGTGCCGG
ACGTCTATTTGAAGGACGGCGACATCGTCAAAGGCGACGGCTGGACGATC
GAGGCGGTGACCACGCCCGGCCACACCGCCAACCACATGGCCTATGCCTA
CAAGGAAGCCAACGCGCTGTTCATCGGCGATCATGTAATGGCGTGGGCGA
CCACCATTGTCGCGCCGCCGGACGGCGCGATGAGCGACTACATGGCCTCG
CTGCACAAGCTGGCCAAACGCTCCGAGCAGGTCTATTTCCCCGGTCATGG
CCCGGCCATCGGCGACGCCAACCGCTTCGTCAATTATTACATTCTGCACC
GCACGGCTCGCGCAGCCGCGCTCCTCCAC
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