mRNA_P-wetherbeei_contig10969.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10969.1.1
Unique NamemRNA_P-wetherbeei_contig10969.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10969.1.1 vs. uniprot
Match: A0A2V6V9M2_9BACT (Fis family transcriptional regulator n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6V9M2_9BACT)

HSP 1 Score: 416 bits (1069), Expect = 5.280e-139
Identity = 218/369 (59.08%), Postives = 258/369 (69.92%), Query Frame = 1
Query:  208 PLLCSEDMLERLQRWADRRRVQARAELGAAEPLLLRALPGGTLDSCLVGGLADEHGGLGLLLGSHDHGAPFSVIERERFAALLEPFAAALATHGQLRELATLRNAAEAESERLRSRLGSGVGLDELVGTDGGLKAAFERIALVTKSDVPVLILGETGAGKEMVAREIHQRSRRREAPFIRVNCGAIPPELIDSELFGHERGSFTGATSQRRGWFERADRGTLLLDEIGDLPPAAQVRLLRVLQDGLIRRVGGEDDIKVDVRIIAATHRDLPHLIQEGQFREDLWYRLATFPIVLPPLRERPADIPALAAHFARRAASRFGLRLQLPGTADLVLLSAYDWPGNVRELAAVMDRAAILGDGQGLQIATALG 1314
            P  CS     RL  W  R  V  RAE  +        +P G     LVG L    G  G+L+     G  F     E    LL+PFA AL  H +LREL  LR  AEAE + L +RLG     + +VG DGGL++  ER+ LV +SDVP+LILGETGAGKE+VAR IH RS R   PF+RVNCGAIPPELIDS+LFGHERGSFTGA   R+GWFERAD GTL LDEIGDLPPAAQVRLLRVLQDG + R+GG++ IKVD RI+ ATHRDL  +++EG+FREDLWYR+A FP++LPPLRER  DIPALA HFA+RAA+RFGL +Q+P   D+  L +Y WPGNVREL AV+DRA ILG+G  L +ATALG
Sbjct:   40 PTECSSGDAARLLAWCQRGEVAHRAERASPVADWAPCVPRGVRGEALVGPLESPRGLQGILVVLSRQGERFDARHVELVHTLLDPFAVALENHHRLRELTALRETAEAEKQSLLTRLGRTQSGETIVGADGGLRSVLERVELVARSDVPILILGETGAGKEVVARAIHTRSPRSAGPFVRVNCGAIPPELIDSQLFGHERGSFTGAVDTRKGWFERADGGTLFLDEIGDLPPAAQVRLLRVLQDGYLERIGGQEAIKVDTRIVTATHRDLTAMVREGRFREDLWYRIAVFPVLLPPLRERREDIPALARHFAQRAATRFGLPVQMPSAQDMAALVSYAWPGNVRELGAVIDRATILGNGARLDVATALG 408          
BLAST of mRNA_P-wetherbeei_contig10969.1.1 vs. uniprot
Match: A0A7Y5SJB6_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A7Y5SJB6_9BACT)

HSP 1 Score: 417 bits (1071), Expect = 7.880e-139
Identity = 238/440 (54.09%), Postives = 288/440 (65.45%), Query Frame = 1
Query:   10 SEFQSMLLAVWREAARHPSLSVAMAAMAAPLRHLWPGLQLAVRGFERALPGVVTQA-----DSRGVEFLPEPLLCSEDMLERLQRWADRRRVQARAELGAAEPLLLRALPGGTLDSCLVGGLADEHGGLGLLLGSHDHGAPFSVIERERFAALLEPFAAALATHGQLRELATLRNAAEAESERLRSRLGSGVGLDELVGTDGGLKAAFERIALVTKSDVPVLILGETGAGKEMVAREIHQRSRRREAPFIRVNCGAIPPELIDSELFGHERGSFTGATSQRRGWFERADRGTLLLDEIGDLPPAAQVRLLRVLQDGLIRRVGGEDDIKVDVRIIAATHRDLPHLIQEGQFREDLWYRLATFPIVLPPLRERPADIPALAAHFARRAASRFGLRLQLPGTADLVLLSAYDWPGNVRELAAVMDRAAILGDGQGLQIATALG 1314
            + F+ +LL VWREA RH  +  + AA+A  L    P   L VR  ++A   + T A      SR  E       CS D L R+  W  R  + +       + +L   +P     + L G L D+ G  G+LL +   G  F         ALLEPF+ AL    +LRE+  LR AAEA+   L +RLG     D +VG D GL++  ER+ LV +SDVPVLI GETG GKE++AR IH RS R   PF+RVNCGAIPPELIDS+LFGHERGSFTGAT   RGWFERADRGTL LDEIG+LPPAAQVRLLRVLQDG   RVG +  I VDVRI+AATHRDL  ++++G+FREDLWYRLA F + LPPLRER  DI ALA HFA+RAA RFGL  ++P   D+ LL +Y WPGN+REL AVMDRAAILGDGQ L++ATALG
Sbjct:    2 ARFRELLLDVWREACRHIRIDESAAAIAEMLSRQMPLGGLLVRRIDKARSCLETVAVALVDPSRHPEHARTE--CSSDDLNRVLTWCSRGEMLSGHRREPPQSVLSLVVPQELDSAVLAGPLRDQQGPEGVLLLAAHPGDRFGEDHATLALALLEPFSVALENDRRLREMEVLREAAEADKRSLLTRLGRQALGDTIVGDDVGLRSVMERVELVARSDVPVLIFGETGTGKELIARAIHTRSERSGGPFMRVNCGAIPPELIDSQLFGHERGSFTGATDTHRGWFERADRGTLFLDEIGELPPAAQVRLLRVLQDGSFERVGAQRPITVDVRIVAATHRDLSGMVRDGKFREDLWYRLAVFSVSLPPLRERTGDISALARHFAQRAAVRFGLTPRMPTNEDIGLLVSYSWPGNIRELGAVMDRAAILGDGQNLEVATALG 439          
BLAST of mRNA_P-wetherbeei_contig10969.1.1 vs. uniprot
Match: A0A7C2NBY9_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Candidatus Dadabacteria bacterium TaxID=2080303 RepID=A0A7C2NBY9_9BACT)

HSP 1 Score: 414 bits (1064), Expect = 6.730e-138
Identity = 232/434 (53.46%), Postives = 287/434 (66.13%), Query Frame = 1
Query:   28 LLAVWREAARHPSLSVAMAAMAAPLRHLWPGLQLAVRGFERALPGVVTQADSRGVEFLPEPLLCSE-----DMLERLQRWADRRRVQARAELGAAEPLLLRALPGGTLDSCLVGGLADEHGGLGLLLGSHDHGAPFSVIERERFAALLEPFAAALATHGQLRELATLRNAAEAESERLRSRLGSGVGLDELVGTDGGLKAAFERIALVTKSDVPVLILGETGAGKEMVAREIHQRSRRREAPFIRVNCGAIPPELIDSELFGHERGSFTGATSQRRGWFERADRGTLLLDEIGDLPPAAQVRLLRVLQDGLIRRVGGEDDIKVDVRIIAATHRDLPHLIQEGQFREDLWYRLATFPIVLPPLRERPADIPALAAHFARRAASRFGLRLQLPGTADLVLLSAYDWPGNVRELAAVMDRAAILGDGQGLQIATALG 1314
            +L VWREA RH  ++  +  +A  L    P  +L V   ++    +  +A + G+  + E L   +     + ++RL  W  R  ++ R +      +   A+P       LVG LA EHG  GLLL        FS  +     +LLEPFA AL    +LREL  LR AAEA+   L +RLG     + ++G DGGL +  ER+ LV  SDVPVLI GETG+GKE+VAR IH RSR  + PFIRVNCGAI P LIDSELFGHE+GSFTGA +  +GWFERAD GTL LDEIG+LP AAQVRLLRVLQDG   RVGGE  IKVDVRI+AATHRDL  ++Q G FREDLWYR+A FPIVLPPLRER  DIP LA HF+RRAA RFGL+LQ+P + D+ LL +Y WPGNVRE ++V+DRA ILGDG+ L++A ALG
Sbjct:    1 MLGVWREACRHIEITECVTNIAKILAGRMPIDRLIVCRIDKEQSRM--EAVAVGLPRIGEKLTSHQTDWTANDMKRLLHWCSRGEIKLRKDEDKTNHISFTAIPPSIRGDVLVGPLASEHGTFGLLLLVAKSPHRFSAEDERICKSLLEPFAVALENDRRLRELNALREAAEADKRSLLARLGREDLSETIIGADGGLSSVMERVGLVAPSDVPVLIFGETGSGKEVVARAIHNRSRHAQGPFIRVNCGAISPGLIDSELFGHEKGSFTGAVTTHQGWFERADGGTLFLDEIGELPQAAQVRLLRVLQDGSFERVGGEKSIKVDVRIVAATHRDLAAMVQGGSFREDLWYRIAVFPIVLPPLRERREDIPILAEHFSRRAAMRFGLKLQMPSSEDIALLLSYHWPGNVREFSSVIDRAVILGDGERLEVAKALG 432          
BLAST of mRNA_P-wetherbeei_contig10969.1.1 vs. uniprot
Match: A0A1R4A451_HALED (GAF/sigma-54-interact/HTH domain transcription regulator n=3 Tax=Bacteria TaxID=2 RepID=A0A1R4A451_HALED)

HSP 1 Score: 413 bits (1062), Expect = 1.580e-137
Identity = 230/432 (53.24%), Postives = 285/432 (65.97%), Query Frame = 1
Query:   28 LLAVWREAARHPSLSVAMAAMAAPLRHLWPGLQLAVRGFERALPGVVTQADSRGV--EFLPEPLL-CSEDMLERLQRWADRRRVQARAELGAAEPLLLRALPGGTLDSCLVGGLADEHGGLGLLLGSHDHGAPFSVIERERFAALLEPFAAALATHGQLRELATLRNAAEAESERLRSRLGSGVGLDELVGTDGGLKAAFERIALVTKSDVPVLILGETGAGKEMVAREIHQRSRRREAPFIRVNCGAIPPELIDSELFGHERGSFTGATSQRRGWFERADRGTLLLDEIGDLPPAAQVRLLRVLQDGLIRRVGGEDDIKVDVRIIAATHRDLPHLIQEGQFREDLWYRLATFPIVLPPLRERPADIPALAAHFARRAASRFGLRLQLPGTADLVLLSAYDWPGNVRELAAVMDRAAILGDGQGLQIATALG 1314
            +L VWREA RH  ++ ++AA+A  L    P  +L +R  +     + T AD+ G   E     L   S D +ERL +W     +   A         L A+P    D+ L+G L  EH  +GLL+      A  S  +      LLEPFAAAL    +LREL  LR +AEA+   L SRLG     D ++G D GL+   +R+  V  SD  VL+LGETG+GKE++AR +HQRS R   PFIRVNCGAIPPEL+DSELFGHE+GSFTGA S+RRGWFERAD GTL LDEIG+LP AAQVRLLRVLQDG   RVGGE  I+VDVR++AAT+ DL  ++Q G+FREDLWYR+A FPIVLPPLRER  DIPALA HFA RAA RFG++ Q+    DL LL+AY WPGNVRE  +V++RA ILGDG+ L ++ ALG
Sbjct:    8 MLEVWREACRHIEIAESVAAIADQLSQWLPIKRLLIRRLDPVTYHLETVADTLGSKDESRDRGLTELSSDNIERLMKWCQLGELAHCASRHHEHSFTLAAIPTSLTDNVLIGPLISEHDTVGLLIMQLRPDAKISEHDEVLCKRLLEPFAAALENDRRLRELKALRESAEADKRSLLSRLGRDALGDTVIGADNGLRQVMQRVQQVADSDAAVLVLGETGSGKEVIARSVHQRSTRAGGPFIRVNCGAIPPELVDSELFGHEKGSFTGAVSRRRGWFERADEGTLFLDEIGELPMAAQVRLLRVLQDGSFERVGGETSIQVDVRVVAATNNDLARMVQRGEFREDLWYRIAVFPIVLPPLRERSEDIPALAEHFAERAARRFGMKPQVLSAHDLSLLAAYPWPGNVREFNSVLERAVILGDGERLDVSQALG 439          
BLAST of mRNA_P-wetherbeei_contig10969.1.1 vs. uniprot
Match: A0A286RBY9_9BACT (Formate hydrogenlyase transcriptional activator n=3 Tax=Planctomycetes TaxID=203682 RepID=A0A286RBY9_9BACT)

HSP 1 Score: 414 bits (1063), Expect = 2.980e-137
Identity = 238/438 (54.34%), Postives = 298/438 (68.04%), Query Frame = 1
Query:   22 SMLLAVWREAARHPSLSVAMAAMAAPLRHLWPGLQLAVRGFERALPGVVTQADSRGVE-FLPEPLL-CSEDMLERLQRWADRRRVQA----RAELGAAEPLLLRALPGGTLDSCLVGGLADEHGGLGL-LLGSHDHGAPFSVIERERFAALLEPFAAALATHGQLRELATLRNAAEAESERLRSRLGSGVGLDELVGTDGGLKAAFERIALVTKSDVPVLILGETGAGKEMVAREIHQRSRRREAPFIRVNCGAIPPELIDSELFGHERGSFTGATSQRRGWFERADRGTLLLDEIGDLPPAAQVRLLRVLQDGLIRRVGGEDDIKVDVRIIAATHRDLPHLIQEGQFREDLWYRLATFPIVLPPLRERPADIPALAAHFARRAASRFGLRLQLPGTADLVLLSAYDWPGNVRELAAVMDRAAILGDGQGLQIATALG 1314
            ++L+ VWREA RH  ++ ++A +A  L++  P   + VR  + +   + T A +  V  +L + +   S   L RL +W   R V      R +L   +   L +L G    + LVGGL  +    G+ LL   + G PF+    + F  +LEP A +L    ++RELA LR AAEAE + L +RLG     D +VG DGGLK   ER+ LV +SDVPVL+LGETG GKE++AR IH RS R +APF+RVNCGAIPPEL+DS+LFGHE+GSFTGA    +GWFERAD GTL LDEIG+LP  AQVRLL+VLQDG   RVGG   I VDVRIIAATHR+L  +++ G+FREDLWYRLA FPI LPPLR+RP DIPALA HFA RAA RF L LQLP   D+ LL +YDWPGN+RELAAV+DRAAILGDG+GLQ+A ALG
Sbjct:   39 TLLVEVWREACRHIEIAESVAGIATVLKNRIPFQVMVVRRLKPSDSVLETVAVAPTVPPWLGQRVTPLSRAALSRLMQWCLGRDVLKMPPNRPDLCGVD---LESLLGNAPAAVLVGGLVSDGKATGIALLVEREDGPPFTTSHVQLFHEVLEPLAVSLENDARVRELAVLREAAEAERQSLLARLGRKSLGDTIVGADGGLKHVMERVELVARSDVPVLLLGETGTGKELIARTIHLRSPRAKAPFLRVNCGAIPPELVDSQLFGHEKGSFTGAVETHQGWFERADGGTLFLDEIGELPLDAQVRLLQVLQDGTFERVGGRHPITVDVRIIAATHRNLQEMVRAGRFREDLWYRLAVFPIFLPPLRDRPEDIPALARHFAERAAVRFNLPLQLPTEEDIRLLMSYDWPGNIRELAAVIDRAAILGDGRGLQVAKALG 473          
BLAST of mRNA_P-wetherbeei_contig10969.1.1 vs. uniprot
Match: A0A1G2Z5P8_9BACT (Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium RBG_13_63_9 TaxID=1801965 RepID=A0A1G2Z5P8_9BACT)

HSP 1 Score: 410 bits (1054), Expect = 2.320e-136
Identity = 233/436 (53.44%), Postives = 283/436 (64.91%), Query Frame = 1
Query:   13 EFQSMLLAVWREAARHPSLSVAMAAMAAPLRHLWPGLQLAVRGFERALPGVVTQADSRGVEFLPEPLLCSEDMLERLQRWADRRRVQARAELGAAEPLLLRALPGGTLDSCLVG--GLADEHGGLGLLLGSHDHGAPFSVIERERFAALLEPFAAALATHGQLRELATLRNAAEAESERLRSRLGSGVGLDELVGTDGGLKAAFERIALVTKSDVPVLILGETGAGKEMVAREIHQRSRRREAPFIRVNCGAIPPELIDSELFGHERGSFTGATSQRRGWFERADRGTLLLDEIGDLPPAAQVRLLRVLQDGLIRRVGGEDDIKVDVRIIAATHRDLPHLIQEGQFREDLWYRLATFPIVLPPLRERPADIPALAAHFARRAASRFGLRLQLPGTADLVLLSAYDWPGNVRELAAVMDRAAILGDGQGLQIATALG 1314
            +FQ++LL+VW+EA RH  +  +   ++A L    P  Q+ VR  +R    + T A   G         CS   ++RL  W  R  V  R   G+    L   +P G       G  G  DEH G+ +L+        F          LL+PF+  L    +LRE+A LR AAEAE+  L +RLG     D +VG + GL+A  ER  LV +SD PVLI GETGAGKE++AR +H RS R   P +RVNCGAIPPELIDSELFGHE+G+FTGA   R+GWFERAD GTL LDEIGDLP AAQVRLLR+LQDG + RVGG+  + VDVRI+AATHRDL  ++ EG+FREDLWYRLA FPIVLPPLRER  DIP LA HFA RAA+RFGL L LP    + LL +Y WPGNVRELAAV+DRAAILGDG+GL+I  ALG
Sbjct:    3 KFQTVLLSVWQEACRHIEIIESTETISAILARHMPIHQILVRRIDRQHCCLETVAAGLGASPGDARTECSPSQMKRLLSWCRRGEVTKRGRGGSLSGELAVMVPEGIEGEAFAGPLGCRDEHFGVLVLVAPPKR--TFHARHVSLMQVLLDPFSVVLDNDRRLREMAALREAAEAETRLLLTRLGRKKLEDTIVGAESGLRAVMERAKLVARSDAPVLIFGETGAGKELLARAVHARSARCAGPIMRVNCGAIPPELIDSELFGHEKGAFTGAVEGRKGWFERADGGTLFLDEIGDLPHAAQVRLLRILQDGWLERVGGQHPVHVDVRIVAATHRDLAGMVAEGEFREDLWYRLAVFPIVLPPLRERREDIPELARHFAERAATRFGLPLVLPSQDGIELLLSYPWPGNVRELAAVIDRAAILGDGEGLEIGKALG 436          
BLAST of mRNA_P-wetherbeei_contig10969.1.1 vs. uniprot
Match: A0A7G9NZL9_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetales bacterium zrk34 TaxID=2723666 RepID=A0A7G9NZL9_9BACT)

HSP 1 Score: 409 bits (1050), Expect = 7.450e-136
Identity = 237/438 (54.11%), Postives = 285/438 (65.07%), Query Frame = 1
Query:   13 EFQSMLLAVWREAARHPSLSVAMAAMA-APLRHLWPGLQLAVRGFERAL---PGVVTQADSRGVEFLPEPLLCSEDMLERLQRWADRRRVQARAELGAAEPLLLRALPGGTLDSCLVGGLADEHGGLGLLLGSHDHGAPFSVIERERFAALLEPFAAALATHGQLRELATLRNAAEAESERLRSRLGSGVGLDELVGTDGGLKAAFERIALVTKSDVPVLILGETGAGKEMVAREIHQRSRRREAPFIRVNCGAIPPELIDSELFGHERGSFTGATSQRRGWFERADRGTLLLDEIGDLPPAAQVRLLRVLQDGLIRRVGGEDDIKVDVRIIAATHRDLPHLIQEGQFREDLWYRLATFPIVLPPLRERPADIPALAAHFARRAASRFGLRLQLPGTADLVLLSAYDWPGNVRELAAVMDRAAILGDGQGLQIATALG 1314
            +F  MLL VWR+A RH  ++ A   +  A  RHL     +  R  E A    P    +AD R    LP+           L RW  + +V  RA    A P  L  +P       L G L  +   +G  +     G PF   + +RF AL EP   AL    +L EL TLR  AEA+      RLG       ++G + GL A  +R+  V +SD PVL+LGETG GKE++AR IH RSR  + PFIRVNCGAI PELIDSELFGHE+G+FTGA  +RRGWFERAD GTLLLDE+G+LPPAAQVRLLRVLQDG+  RVGGE  I V VRIIAATHRDLP ++Q+G FR+DLWYR+A FPIV+PPLRERP DI ALA HFARRAA+R GLRLQ+P  ADL LL+AYDWPGN+RELA+V++RAAILGDG+ L IA ALG
Sbjct:    3 QFHPMLLEVWRQACRHIDIAEACQNICTAVARHLPMDRLVIYRLDETARLIEPVAAGRADGRSAP-LPQATSPGTAAWRDLMRWCRQNQVTHRAAEPDAPPFKL--IPRNDACDRLTGPLISQTKVIGGAVIIAPPGRPFDDDDIKRFDALREPLTVALENDERLHELITLRERAEADKRSALVRLGREDFSQTIIGAEAGLNAVMQRLDQVARSDTPVLLLGETGCGKEVIARAIHDRSRHPDGPFIRVNCGAIAPELIDSELFGHEKGAFTGAAMRRRGWFERADGGTLLLDEVGELPPAAQVRLLRVLQDGMFERVGGEQSIHVHVRIIAATHRDLPAMVQDGSFRQDLWYRIAVFPIVIPPLRERPGDIAALADHFARRAATRLGLRLQVPTDADLDLLAAYDWPGNIRELASVIERAAILGDGRRLDIAKALG 437          
BLAST of mRNA_P-wetherbeei_contig10969.1.1 vs. uniprot
Match: A0A538RT74_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A538RT74_9BACT)

HSP 1 Score: 406 bits (1044), Expect = 1.700e-134
Identity = 234/436 (53.67%), Postives = 284/436 (65.14%), Query Frame = 1
Query:   16 FQSMLLAVWREAARHPSLSVAMAAMAAPLRHLWPGLQLAVR--GFER-ALPGVVTQADSRGVEFLPEPLLCSEDMLERLQRWADRRRVQARAELGAAEPLLLRALPGGTLDSCLVGGLADEHGGLGLLLGSHDHGAPFSVIERERFAALLEPFAAALATHGQLRELATLRNAAEAESERLRSRLGSGVGLDELVGTDGGLKAAFERIALVTKSDVPVLILGETGAGKEMVAREIHQRSRRREAPFIRVNCGAIPPELIDSELFGHERGSFTGATSQRRGWFERADRGTLLLDEIGDLPPAAQVRLLRVLQDGLIRRVGGEDDIKVDVRIIAATHRDLPHLIQEGQFREDLWYRLATFPIVLPPLRERPADIPALAAHFARRAASRFGLRLQLPGTADLVLLSAYDWPGNVRELAAVMDRAAILGDGQGLQIATALG 1314
            F  +LL  WRE  RH  +  ++A +A  L    P   + VR   F+R +L  V T      V   P    C ED+L+ ++ WA+R +V  R   G     L   LP G     L G L  E G  G+L+        F     E  AALLEPF  AL    ++REL  LR A EA++  L SRLG    +D +VG + GL+   E+I LV +SD PVL+ GETG+GKE+VAR IH RSRR + PF+RVNCGAIPPEL+DSELFGHE+GSFTGAT+ R+GWFERAD GTL LDE G+LP AAQVRLLR+LQDG   RVGGE  + VDVRI+AATHRDL  L+  G+FREDLWYR+  FPI LPPLR+R  DIPALAAHFA RAA+R G    +P   D+ LL AY WPGNVRELAAV++RAAILGDG+ L +A ALG
Sbjct:    4 FSLLLLDAWREVCRHIEIGESVARVAPILVRRLPVDLVLVRRIDFQRGSLETVATGVCGEQVALKPRSE-CPEDLLDEIRHWAERGQV-IRLTAGQVREQLRGVLPDGLEGDVLCGPLNTEEGPAGVLILLARPPQAFRAEHEELLAALLEPFTVALENDRRVRELTRLREALEADNRSLLSRLGRHDIVDSVVGAETGLRPVMEKIELVARSDAPVLVFGETGSGKEVVARAIHTRSRRADKPFLRVNCGAIPPELVDSELFGHEKGSFTGATNIRKGWFERADGGTLFLDECGELPLAAQVRLLRILQDGTFERVGGERQLTVDVRIVAATHRDLQSLVAAGRFREDLWYRIVVFPIRLPPLRDRKEDIPALAAHFALRAANRLGTLPLVPSPEDIRLLLAYPWPGNVRELAAVIERAAILGDGKHLDVAQALG 437          
BLAST of mRNA_P-wetherbeei_contig10969.1.1 vs. uniprot
Match: A0A518HE85_9BACT (Formate hydrogenlyase transcriptional activator n=2 Tax=Tautonia plasticadhaerens TaxID=2527974 RepID=A0A518HE85_9BACT)

HSP 1 Score: 402 bits (1033), Expect = 6.220e-133
Identity = 229/436 (52.52%), Postives = 289/436 (66.28%), Query Frame = 1
Query:   22 SMLLAVWREAARHPSLSVAMAAMAAPLRHLWPGLQLAVRGFERALPGVVTQADSRGVEFLPEPLLCSEDM----LERLQRWADRRRVQARAELGA-AEPLLLRALPGGTLDSCLVGGLADEHGGLGLLLGSHDHGAPFSVIERERFAALLEPFAAALATHGQLRELATLRNAAEAESERLRSRLGSGVGLDELVGTDGGLKAAFERIALVTKSDVPVLILGETGAGKEMVAREIHQRSRRREAPFIRVNCGAIPPELIDSELFGHERGSFTGATSQRRGWFERADRGTLLLDEIGDLPPAAQVRLLRVLQDGLIRRVGGEDDIKVDVRIIAATHRDLPHLIQEGQFREDLWYRLATFPIVLPPLRERPADIPALAAHFARRAASRFGLRLQLPGTADLVLLSAYDWPGNVRELAAVMDRAAILGDGQGLQIATALG 1314
            ++LL +WRE  RH  +  ++  +A  L    P     VR  + A  GVV           P P     ++    ++RL  W  RR+V   A+  A AEP  +  LP GT    L G L    G  G+LL +      F     E  AALL+PFA AL    +LREL +LR A EAE+  L ++LG     D +VG + GL+   E++A V  SD PVL+LGETG+GKE+VAR +H RSRR   PF+R+NCGAIPPEL+DSELFGHE+GSFTGA ++R+GWFERAD GTL LDE+G+LPPAAQVRLLRVLQDG + RVGGE  + VDVRI+AATHRDL  ++ +G+FR+DLWYR+A FPI LPPLRERPAD+PALAAHFA R++ R G+    P   D+ LL  Y WPGNVRELAAV++RAAILGDG+ L++A ALG
Sbjct:   18 TLLLEIWREVCRHLQIPESVELIAPLLARRLPADLALVRRIDAA-GGVVETVALGHCRPGPAPSRARSELTPEAMQRLIAWCHRRQVLRLADRSATAEPPGI--LPEGTDGEVLAGPLLAADGPAGVLLLTARPPRQFRDEHAELLAALLDPFAVALDNDRRLRELTSLREAVEAENRSLLTKLGRLDISDSIVGAETGLREVMEQVARVAPSDAPVLVLGETGSGKEVVARAVHTRSRRARGPFLRINCGAIPPELVDSELFGHEKGSFTGAVAERKGWFERADTGTLFLDEVGELPPAAQVRLLRVLQDGQLERVGGERPVSVDVRIVAATHRDLEAMVGDGRFRQDLWYRIAVFPIRLPPLRERPADVPALAAHFALRSSRRLGMPPLAPTAEDVGLLVTYPWPGNVRELAAVIERAAILGDGERLEVALALG 450          
BLAST of mRNA_P-wetherbeei_contig10969.1.1 vs. uniprot
Match: A0A1G3A9N7_9BACT (Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium RBG_16_64_12 TaxID=1801971 RepID=A0A1G3A9N7_9BACT)

HSP 1 Score: 400 bits (1027), Expect = 3.430e-132
Identity = 231/439 (52.62%), Postives = 284/439 (64.69%), Query Frame = 1
Query:   13 EFQSMLLAVWREAARHPSLSVAMAAMAAPLRHLWPGLQLAVRGFERALPGVVTQADSRGVEFLPEPLL---CSEDMLERLQRWADRRRVQARAELGAAEPLLLRALPGGTLDSCLVG--GLADEHGGLGLLLGSHDHGAPFSVIERERFAALLEPFAAALATHGQLRELATLRNAAEAESERLRSRLGSGVGLDELVGTDGGLKAAFERIALVTKSDVPVLILGETGAGKEMVAREIHQRSRRREAPFIRVNCGAIPPELIDSELFGHERGSFTGATSQRRGWFERADRGTLLLDEIGDLPPAAQVRLLRVLQDGLIRRVGGEDDIKVDVRIIAATHRDLPHLIQEGQFREDLWYRLATFPIVLPPLRERPADIPALAAHFARRAASRFGLRLQLPGTADLVLLSAYDWPGNVRELAAVMDRAAILGDGQGLQIATALG 1314
            +FQ++LL+VW+EA RH  +S + A ++A L    P  Q+ VR  +     + T A         +P     CS   L++L  W  R  V       +    L   +P G     L G  G+ DEH G+ +L+   +    F          LL+PF+ AL    +LRE+A LR AAEAE+  L +RLG     D +VG D GL+A  ER  LV +SD PVLI GETG GKE++AR IH RS R   P +RVNCGAIPPEL+DSELFGHE+G+FTGA   R+GWFERAD GTL LDEIGDLP AAQVRLLR+LQDG + RVGG+  + VDVRI+AATHR+L  ++ EG+FREDLWYRLA FPIVLPPLRER  DIP LA HFA RAA+RFGL L LP    + LL +Y WPGNVRELAAV+DRAAILG G+ L+I  ALG
Sbjct:    3 KFQTVLLSVWQEACRHIEISESTATISAILSRHMPIHQVFVRRIDCQHCCLETVALGLAASEHVQPAARTECSPSQLKKLLSWCRRGEVTKCGGHASLSGELATMVPAGIEGDVLAGPLGVRDEHFGVLVLVAPPERA--FKARHVSLMQVLLDPFSVALDNDQRLREMAALREAAEAETRLLLTRLGRKKLEDTIVGADSGLRAVMERAELVARSDAPVLIFGETGTGKELLARAIHARSARCAGPIMRVNCGAIPPELVDSELFGHEKGAFTGAVETRKGWFERADGGTLFLDEIGDLPHAAQVRLLRILQDGWLERVGGQHPVSVDVRIVAATHRNLAGMVAEGKFREDLWYRLAVFPIVLPPLRERHEDIPELAEHFAGRAATRFGLPLVLPSRDGIDLLISYPWPGNVRELAAVIDRAAILGGGERLEIGKALG 439          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10969.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V6V9M2_9BACT5.280e-13959.08Fis family transcriptional regulator n=1 Tax=Candi... [more]
A0A7Y5SJB6_9BACT7.880e-13954.09Sigma-54-dependent Fis family transcriptional regu... [more]
A0A7C2NBY9_9BACT6.730e-13853.46Sigma-54-dependent Fis family transcriptional regu... [more]
A0A1R4A451_HALED1.580e-13753.24GAF/sigma-54-interact/HTH domain transcription reg... [more]
A0A286RBY9_9BACT2.980e-13754.34Formate hydrogenlyase transcriptional activator n=... [more]
A0A1G2Z5P8_9BACT2.320e-13653.44Fis family transcriptional regulator n=1 Tax=Planc... [more]
A0A7G9NZL9_9BACT7.450e-13654.11Sigma-54-dependent Fis family transcriptional regu... [more]
A0A538RT74_9BACT1.700e-13453.67Sigma-54-dependent Fis family transcriptional regu... [more]
A0A518HE85_9BACT6.220e-13352.52Formate hydrogenlyase transcriptional activator n=... [more]
A0A1G3A9N7_9BACT3.430e-13252.62Fis family transcriptional regulator n=1 Tax=Planc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10969contigP-wetherbeei_contig10969:913..2226 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog530564.Psta_0612
PFAMsGAF,GAF_2,HTH_8,Sigma54_activat
Model size1314
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.69e-128
EggNOG OGsCOG3829@1|root,COG3829@2|Bacteria,2J54R@203682|Planctomycetes
DescriptionSigma-54 interaction domain
Cds size1314
COG categoryKT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185892.02772-CDS-P-wetherbeei_contig10969:912..22261683185892.02772-CDS-P-wetherbeei_contig10969:912..2226Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10969 913..2226 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10969.1.1prot_P-wetherbeei_contig10969.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10969 913..2226 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10969.1.1

>prot_P-wetherbeei_contig10969.1.1 ID=prot_P-wetherbeei_contig10969.1.1|Name=mRNA_P-wetherbeei_contig10969.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=438bp
MTDSEFQSMLLAVWREAARHPSLSVAMAAMAAPLRHLWPGLQLAVRGFER
ALPGVVTQADSRGVEFLPEPLLCSEDMLERLQRWADRRRVQARAELGAAE
PLLLRALPGGTLDSCLVGGLADEHGGLGLLLGSHDHGAPFSVIERERFAA
LLEPFAAALATHGQLRELATLRNAAEAESERLRSRLGSGVGLDELVGTDG
GLKAAFERIALVTKSDVPVLILGETGAGKEMVAREIHQRSRRREAPFIRV
NCGAIPPELIDSELFGHERGSFTGATSQRRGWFERADRGTLLLDEIGDLP
PAAQVRLLRVLQDGLIRRVGGEDDIKVDVRIIAATHRDLPHLIQEGQFRE
DLWYRLATFPIVLPPLRERPADIPALAAHFARRAASRFGLRLQLPGTADL
VLLSAYDWPGNVRELAAVMDRAAILGDGQGLQIATALG
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mRNA from alignment at P-wetherbeei_contig10969:913..2226+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10969.1.1 ID=mRNA_P-wetherbeei_contig10969.1.1|Name=mRNA_P-wetherbeei_contig10969.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1314bp|location=Sequence derived from alignment at P-wetherbeei_contig10969:913..2226+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACGGACTCTGAATTCCAATCGATGCTGCTCGCAGTCTGGCGCGAGGC GGCGCGCCACCCCTCCCTGAGTGTCGCGATGGCCGCCATGGCGGCCCCGC TGCGGCATCTGTGGCCTGGCTTGCAACTCGCCGTGCGCGGCTTCGAGCGC GCCCTGCCCGGCGTCGTGACGCAGGCCGATAGTCGCGGCGTGGAGTTTTT GCCCGAACCCTTGCTGTGCAGCGAGGACATGCTGGAACGACTGCAACGCT GGGCTGATCGCCGACGCGTGCAAGCGCGTGCCGAACTCGGCGCCGCCGAG CCACTGCTGTTGCGGGCCCTGCCGGGCGGCACATTGGATAGTTGCCTGGT CGGGGGCCTGGCCGATGAGCACGGCGGCCTTGGCCTGTTGCTCGGCAGTC ACGACCATGGCGCGCCGTTCTCCGTTATCGAACGCGAGCGCTTCGCGGCC CTGCTGGAACCCTTCGCTGCCGCGCTCGCGACCCATGGTCAGTTGCGCGA ACTGGCCACCTTGCGCAACGCCGCCGAGGCGGAATCCGAGCGCCTGCGCT CGCGACTTGGCAGCGGTGTAGGACTCGATGAACTGGTCGGCACCGACGGC GGCTTGAAAGCAGCCTTCGAGCGCATCGCGCTGGTGACGAAGTCCGACGT GCCGGTGCTGATCCTGGGTGAAACCGGCGCCGGCAAGGAAATGGTTGCGC GCGAGATCCATCAGCGCTCGCGGCGCCGCGAAGCGCCCTTCATCCGCGTC AACTGCGGCGCGATTCCGCCGGAACTGATCGACTCTGAATTATTCGGCCA CGAGCGCGGCAGTTTCACCGGCGCCACCAGTCAACGTCGCGGCTGGTTTG AACGCGCTGATCGCGGCACTTTGTTACTCGACGAAATCGGCGACCTGCCG CCGGCCGCACAGGTGCGCCTACTCCGAGTACTGCAGGATGGTCTTATCCG TCGTGTCGGTGGCGAAGACGACATCAAGGTCGACGTGCGCATCATTGCCG CGACCCATCGCGATCTGCCCCATCTGATCCAGGAAGGACAGTTTCGCGAA GACCTCTGGTATCGCCTCGCAACCTTTCCAATCGTGCTGCCACCGCTGCG CGAACGGCCGGCGGATATTCCCGCGCTGGCTGCCCATTTCGCGCGCCGCG CGGCGAGCCGCTTCGGCCTGCGCCTGCAATTGCCGGGGACGGCGGATCTG GTGTTGCTCAGCGCTTATGACTGGCCCGGTAATGTGCGCGAACTGGCGGC CGTCATGGATCGCGCGGCCATTCTCGGCGACGGTCAGGGCCTGCAGATTG CCACCGCTCTCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10969:913..2226+

>mRNA_P-wetherbeei_contig10969.1.1 ID=mRNA_P-wetherbeei_contig10969.1.1|Name=mRNA_P-wetherbeei_contig10969.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1314bp|location=Sequence derived from alignment at P-wetherbeei_contig10969:913..2226+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACGGACTCTGAATTCCAATCGATGCTGCTCGCAGTCTGGCGCGAGGC
GGCGCGCCACCCCTCCCTGAGTGTCGCGATGGCCGCCATGGCGGCCCCGC
TGCGGCATCTGTGGCCTGGCTTGCAACTCGCCGTGCGCGGCTTCGAGCGC
GCCCTGCCCGGCGTCGTGACGCAGGCCGATAGTCGCGGCGTGGAGTTTTT
GCCCGAACCCTTGCTGTGCAGCGAGGACATGCTGGAACGACTGCAACGCT
GGGCTGATCGCCGACGCGTGCAAGCGCGTGCCGAACTCGGCGCCGCCGAG
CCACTGCTGTTGCGGGCCCTGCCGGGCGGCACATTGGATAGTTGCCTGGT
CGGGGGCCTGGCCGATGAGCACGGCGGCCTTGGCCTGTTGCTCGGCAGTC
ACGACCATGGCGCGCCGTTCTCCGTTATCGAACGCGAGCGCTTCGCGGCC
CTGCTGGAACCCTTCGCTGCCGCGCTCGCGACCCATGGTCAGTTGCGCGA
ACTGGCCACCTTGCGCAACGCCGCCGAGGCGGAATCCGAGCGCCTGCGCT
CGCGACTTGGCAGCGGTGTAGGACTCGATGAACTGGTCGGCACCGACGGC
GGCTTGAAAGCAGCCTTCGAGCGCATCGCGCTGGTGACGAAGTCCGACGT
GCCGGTGCTGATCCTGGGTGAAACCGGCGCCGGCAAGGAAATGGTTGCGC
GCGAGATCCATCAGCGCTCGCGGCGCCGCGAAGCGCCCTTCATCCGCGTC
AACTGCGGCGCGATTCCGCCGGAACTGATCGACTCTGAATTATTCGGCCA
CGAGCGCGGCAGTTTCACCGGCGCCACCAGTCAACGTCGCGGCTGGTTTG
AACGCGCTGATCGCGGCACTTTGTTACTCGACGAAATCGGCGACCTGCCG
CCGGCCGCACAGGTGCGCCTACTCCGAGTACTGCAGGATGGTCTTATCCG
TCGTGTCGGTGGCGAAGACGACATCAAGGTCGACGTGCGCATCATTGCCG
CGACCCATCGCGATCTGCCCCATCTGATCCAGGAAGGACAGTTTCGCGAA
GACCTCTGGTATCGCCTCGCAACCTTTCCAATCGTGCTGCCACCGCTGCG
CGAACGGCCGGCGGATATTCCCGCGCTGGCTGCCCATTTCGCGCGCCGCG
CGGCGAGCCGCTTCGGCCTGCGCCTGCAATTGCCGGGGACGGCGGATCTG
GTGTTGCTCAGCGCTTATGACTGGCCCGGTAATGTGCGCGAACTGGCGGC
CGTCATGGATCGCGCGGCCATTCTCGGCGACGGTCAGGGCCTGCAGATTG
CCACCGCTCTCGGC
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