mRNA_P-wetherbeei_contig1096.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1096.3.1 vs. uniprot
Match: A0A6H5JUL1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUL1_9PHAE) HSP 1 Score: 367 bits (941), Expect = 8.840e-106 Identity = 240/594 (40.40%), Postives = 327/594 (55.05%), Query Frame = 1
Query: 460 SSSDHDDRDDVYEEDGPRSVDMSDGGGRNISLRKACDLCTRRKRACDGKKPCALCRELGVAHTCVYSARQKSGRKKKPRTEIDGILHYDETGARGILGLHPPGAGGYGAGAYGGFSSGHPAGGPAFGASGATGLVGTMESFFLATYLRDFNRFVPLTSDSVVTQSMLEVLSPAVA---VAFPDPFQKAGNASSQLELTSRRHARLAVFWGVVALGARIVGAPDAGMQRYLQLMRVSLKECFDSGDREVVQAYLLLSTLESMQGHHAKARRYLNFASTMYSG--LKAAEKESREQEEIAAGGIGIGGKPAGCDKKSDGCEDEPMEVVISMYQHKMKEPMLEAKECAESKILLEVGSNRPNDLAAVGSSSAGTXXXXXXXXXXXDGGASSATDATPCGGSPGSGXXXXXXDGGICPIQQRFNEHRSRPMDALRLLICTTVSTRTALDPRSSCPKVRAALAKADYMLESAHQVVMRSSLAECIASLVPVRIWSGVTRCMRG-----DRESGVATIEAAVELALTRPGLMTFPLWWHAVHCAAVVLAHCGRREAYEKLRVAYNVVTFGGTELPPLADFHAEAVCLE-GSHCRALAHWL 2208
S+S ++ + +E+ R V+ G+ LRKACDLCT+RKR C+GK PC+ C E GV + CVYS R KSGRKKK R IDG+L+ + T + +P G + P+ G F ASGA GL G +E+FFLATYLRDFNR VPLT++S VT+ MLEVLSPAV+ +A +P ++ +RR ARLAVFWGVVA+G+RI+GA D RYL LMR +L+ECFD D+EVVQAYLLLST+E+M+G+ A +RYL+ A TM++G + K R++ E +D +++V MY +P S VG R N A GS ++ + T GG SG D I +E +S P+ AL+ L + DP + C V+ LA+ D L+ AH + + + L+ECI +V V+I+ GVT MR DR+ G+A +E V ALTRPGL TFP+WWHA+HCAA+ LAH GR + Y +LR +N TF GTE+P + D+ +VC + G +C LA+WL
Sbjct: 92 SNSSGTNKRSLSDEEQLRLVEQEQSHGQQ--LRKACDLCTKRKRKCNGKHPCSQCTETGVPNQCVYSPRLKSGRKKKFR--IDGVLYEEGTYGGELARANPGGV----------RRNVDPSAGR-FSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVLSPAVSSRGLATANPIKQP---------ETRRQARLAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAIGPEGKLLRDRSE----------------------QDVSLDLVFQMYD----QPDGAVSGFNRSGA---VGDWRRNQNATKGSPTS--------------------PEQTHSGGGSDSGKPTSAVDQMIAQAVSPPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVTMLMRSWGQLEDRDIGLAQVEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNKTTFPGTEMPSIEDYSPASVCPQLGGNCSKLAYWL 612
BLAST of mRNA_P-wetherbeei_contig1096.3.1 vs. uniprot
Match: A0A836CBP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBP3_9STRA) HSP 1 Score: 238 bits (606), Expect = 5.840e-62 Identity = 165/486 (33.95%), Postives = 233/486 (47.94%), Query Frame = 1
Query: 814 HPAGGPAFGASGATGLVGTMESFFLATYLRDFNRFVPLTSDSVVTQSMLEVLSPAVAVAFPDPFQKAGNASSQLELTSRRHARLAVFWGVVALGARIVGAPDAGMQRYLQLMRVSLKECFDSGDREVVQAYLLLSTLESMQGHHAKARRYLNFASTMYSGLKAAEKESREQEEIAAGGIGIGGKPAGCDKKSDGCEDEPMEVVISMYQHKMKEPMLEAKECAESKILLEVGSNRPNDLAAVGSSSAGTXXXXXXXXXXXDGGASSATDATPCGGSPGSGXXXXXXDGGICPIQQRFNEHRSRPMDALRLLICTTVSTRTALDPRSSCPKVRAALAKADYMLESAHQVVMRSS-LAECIASLVPVRIWSGVTRCMRGDRE---------------SGVATIEAAVELALTRPGLMTFPLWWHAVHCAAVVLAHCGRREAYEKLRVAYNVVTFGGTELPPLADFHAEAVCLEGSHCRALAHWLNRTQP 2223
HP P F AS A GLVG +E+ F+A Y+RD N F+P+TS+ V MLE V P A AS RR A+LAVFWGVVALG+RI+GAP A ++RY + +L++CFD D VVQAYLLL +LE+M G+ KARRY++FA T+++ L+A + + Q ++ E +E ++ ++ +M E C D G +A GA++A A C + I +PMDALRL + TR LDP S CP V A L + + ++ SS L +C+A + P IW G+T M G + +G+ + A +ELA++RPGLMTFPLWWH +HCAA+ L H G R Y++ + ++ + GT+LPP F+ + VC + CR WL R P
Sbjct: 276 HPLARP-FTASPALGLVGHVENIFIAAYIRDLNNFIPMTSEGAVMSGMLETGKSLV------PANAAPAASK------RRSAKLAVFWGVVALGSRILGAPRADVERYRAQVTAALRDCFDEDDPMVVQAYLLLGSLETMLGNCPKARRYMHFAKTVHASLRAKSVQEQHQAQL-----------------------EGLETLLQVFGARMCE-------C---------------DAVDEGPCTAS--------------GANTAVAAAACSEM-------------LQSIFMARTGQAVKPMDALRLTLGMPNITRKVLDPESPCPIVLAHLHHLENACDGVGVIINTSSVLTDCVAIVAPQMIWHGITLSMSGRIQXXXXXXXXXXXXXXXAGLKEVAAGMELAMSRPGLMTFPLWWHCMHCAAITLQHHGLRADYDRFKAVFDNHCYPGTQLPPFDAFNLDHVCGADNLCRQYQAWLLRRMP 676
BLAST of mRNA_P-wetherbeei_contig1096.3.1 vs. uniprot
Match: A0A835YR83_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR83_9STRA) HSP 1 Score: 141 bits (356), Expect = 3.360e-30 Identity = 69/174 (39.66%), Postives = 103/174 (59.20%), Query Frame = 1
Query: 1708 HRSRPMDALRLLICTTVSTRTALDPRSSCPKVRAALAKADYMLESAHQVVMRSSLAECIASLVPVRIWSGVTRCMRGDRESGVATIEAAVELALTRPGLMTFPLWWHAVHCAAVVLAHCGRREAYEKLRVAYNVVTFGGTELPPLADFHAE--AVCLEGSHCRALAHWLNRTQP 2223
H P++ALR++I ALD RS+C +VR +L ++ + V+ S L +C+A P ++ G+T M+G GV IE + LA+TRPGL+TF +WWH +HCAA+ +AH R + Y +L+ Y+ T GT+LP LAD+HA+ +VC +C+ HWL R P
Sbjct: 930 HVRSPINALRIMIGLQGFASKALDHRSTCAEVRHSLLLLEHAWDGVLAVITNSGLQDCVAVTAPQCLYHGITLVMQGRLAMGVEHIERGINLAITRPGLVTFTIWWHCLHCAAITMAHLNRVDTYLRLKDVYDRHTHPGTQLPSLADYHADCGSVCGPDQYCQQFRHWLERRLP 1103
BLAST of mRNA_P-wetherbeei_contig1096.3.1 vs. uniprot
Match: A0A835Z4T4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4T4_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.150e-16 Identity = 57/173 (32.95%), Postives = 90/173 (52.02%), Query Frame = 1
Query: 1714 SRPMDALRLLI-----------CTTVSTRTALDPRSSCPKVRAALAKADYMLESAHQVVMRSSLAECIASLVPVRIWSGVTRCMRGDRESGVATIEAAVELALTRPGLMTFPLWWHAVHCAAVVLAHCGRREAYEKLRVAYNVVTFGGTELPPLADFHAE--AVCLEGSHCRA 2193
SRP DALR+++ AL+P S V+ + ++A ++ ++L+ CIA+ P + G T M+ E G+A IE + LA+ +P L+ F LWWHA+HC + LAH GR AY + + Y+ TF GT+LP + + A+ ++C G +C A
Sbjct: 208 SRPFDALRIMLGVXXXXXXXXXXXXXXXXXALEPASPTHVVQQNVQHLVDAWDAAGVIMTCTTLSGCIAARAPQLLLRGSTLLMQERVEEGLADIEQGLALAVQQPNLIRFSLWWHAIHCGVIGLAHHGRIGAYVRTKAVYDAYTFPGTQLPDMPTYLADDHSICGPGHYCIA 380
BLAST of mRNA_P-wetherbeei_contig1096.3.1 vs. uniprot
Match: D8LU13_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU13_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 7.290e-11 Identity = 73/265 (27.55%), Postives = 114/265 (43.02%), Query Frame = 1
Query: 553 LRKACDLCTRRKRACDGKKPCALCRELGVAHTCVYSAR-----QKSGRKKKPRTEIDGILHYDETGARGILGLHPPGAGGYGAGAYGGFSSGH-PAGGPAFGASGATGLVGTMESFFLATYLRDFNRFVPLTSDSVVTQSMLEVLSPAVAVAFP--------DPFQKAGNASSQLELTSRRHA-----RLAVFWGVVALGARIVGAPDAGMQRYLQLMRVSL-KECFDSGDREVVQAYLLLSTLESMQGHHAKARRYLNFASTMY 1287
+R++C C R+K++CDG++PC C G C YS R Q G++ +PR H E +L PP A SS P AS A GLVG ES FL+ + F+PLT+ S + ++M+++++ + P + A L S H R FW +ALGA G+P + +Y QL +L K D EV +A+ +L+ L G + + Y + +++
Sbjct: 23 MRRSCSECGRKKKSCDGRRPCGRCVRTGS--NCTYSKRRWHLPQPHGQQHQPRPSRRDRTHRKEV----LLQSSPPEAL---------VSSARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVG-FLPLTTRSTIREAMVQIMATPATLQRPAVGGGCDEEALFDAIARGEDLINASEGHQHPMNPRSCTFWCAIALGALAKGSPFESVAKYSQLAHEALAKSKSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLF 271
BLAST of mRNA_P-wetherbeei_contig1096.3.1 vs. uniprot
Match: D8LU16_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU16_ECTSI) HSP 1 Score: 59.3 bits (142), Expect = 4.330e-5 Identity = 51/152 (33.55%), Postives = 78/152 (51.32%), Query Frame = 1
Query: 553 LRKACDLCTRRKRACDGKKPCALCRELGVAHTCVYSARQKSGRKKKPRTEIDGILHYDETGARG-ILGLH--PPGAGGYGAGAYGGFSSGH-PAGGPAFGASGATGLVGTMESFFLATYLRDFNRFVPLTSDSVVTQSMLEVL-SPAVAVAF 993
+R++C C R+K+ CDG++PC C G C YS R++ + +T + D GA G + LH PPGA +SG P AS ATGLVG E+ FL+ + F+PLT+ S + ++M+ ++ SPA+ +F
Sbjct: 28 IRRSCSECGRKKKRCDGQRPCRRCVRSGSQ--CTYSKRRRRLLQTHKQTHL---RQPDRDGAHGGEVPLHSTPPGALA---------TSGRLPLARFGLSASPATGLVGMQENAFLSDFFGCVG-FLPLTTQSHIRETMVNIMVSPAIRQSF 164
BLAST of mRNA_P-wetherbeei_contig1096.3.1 vs. uniprot
Match: D8LD86_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD86_ECTSI) HSP 1 Score: 59.3 bits (142), Expect = 4.850e-5 Identity = 38/147 (25.85%), Postives = 71/147 (48.30%), Query Frame = 1
Query: 856 GLVGTMESFFLATYLRDFNRFVPLTSDSVVTQSMLEVLSPAVAVAFPDPFQKAGNASSQLELTSRRHARLAVFWGVVALGARIVGAPDAGMQRYLQLMRVSLKECFDSGDREVVQAYLLLSTLESMQGHHAKARRYLNFASTMYSGL 1296
G+ ++ +L +L++FN FVPLT+ ++ ++ +P P + E R++AR+AV G + +GA + G + YL+ +R +L FD E + AY++ + + G+ A R Y+ FA + + L
Sbjct: 99 GITSKVDVTYLNFFLKEFNAFVPLTTQDILRDAL-----------YPVPAALTERSFHGDEEYRRQNARVAVIQGCITIGALLKGHTQ--VVGYLRNVREALTNSFDFVSSETMSAYMVTAYCHDLMGNAAATRNYMEFAKAVATQL 232 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1096.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1096.3.1 >prot_P-wetherbeei_contig1096.3.1 ID=prot_P-wetherbeei_contig1096.3.1|Name=mRNA_P-wetherbeei_contig1096.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=910bp MSDGGGRNISLRKACDLCTRRKRACDGKKPCALCRELGVAHTCVYSARQKback to top mRNA from alignment at P-wetherbeei_contig1096:2545..7781- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1096.3.1 ID=mRNA_P-wetherbeei_contig1096.3.1|Name=mRNA_P-wetherbeei_contig1096.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5237bp|location=Sequence derived from alignment at P-wetherbeei_contig1096:2545..7781- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1096:2545..7781- >mRNA_P-wetherbeei_contig1096.3.1 ID=mRNA_P-wetherbeei_contig1096.3.1|Name=mRNA_P-wetherbeei_contig1096.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2730bp|location=Sequence derived from alignment at P-wetherbeei_contig1096:2545..7781- (Phaeothamnion wetherbeei SAG_119_79)back to top |