mRNA_P-wetherbeei_contig1096.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1096.1.1
Unique NamemRNA_P-wetherbeei_contig1096.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1096.1.1 vs. uniprot
Match: A0A7S2DRR2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DRR2_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.160e-61
Identity = 104/176 (59.09%), Postives = 132/176 (75.00%), Query Frame = 1
Query:    4 QLHDRVELLGAVPHAEVRSVLVRGHIFLNCSLTESFCIAIVEAACCGLFVVSTSVGGVPEVLPHSMIKFAEPSVASLMVGLLHAIQNLV-VSPAEFHARVRDMYSWSDVAARTERAYADVLKATPRPLAARLRSFRKVGNFGQVMACFVTAALHMFWRLLEWLSPADGIEIAPDLP 528
            QL DRVELLGAVP+++VR+VLVRGHIFLNCSLTESFCIAI+EAACCGL VVST VGGVPEVLP SMIKFA P V SL+  +  AI +   + P++FH +V +MYSW+DVA RTE  YA V++     L  R R +R VG F  ++ CF+ AALH++  +LE++ PA+  ++AP  P
Sbjct:  137 QLDDRVELLGAVPYSQVRNVLVRGHIFLNCSLTESFCIAILEAACCGLVVVSTQVGGVPEVLPKSMIKFATPEVHSLVDAVGDAIASAKKIVPSDFHEQVNNMYSWADVALRTELVYARVVQLPTPSLTKRFRKYRTVGPFAGLICCFIVAALHLYLFVLEYMDPAEDTDMAPQFP 312          
BLAST of mRNA_P-wetherbeei_contig1096.1.1 vs. uniprot
Match: A0A7S1GBW6_9STRA (Phosphatidylinositol N-acetylglucosaminyltransferase (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GBW6_9STRA)

HSP 1 Score: 203 bits (516), Expect = 2.910e-60
Identity = 105/171 (61.40%), Postives = 123/171 (71.93%), Query Frame = 1
Query:    4 QLHDRVELLGAVPHAEVRSVLVRGHIFLNCSLTESFCIAIVEAACCGLFVVSTSVGGVPEVLPHSMIKFAEPSVASLMVGLLHAIQNLV-VSPAEFHARVRDMYSWSDVAARTERAYADVLKATPRPLAARLRSFRKVGNFGQVMACFVTAALHMFWRLLEWLSPADGIEI 513
            QLHDRVELLGAVPHA+VR VLVRGH+FLNCSLTESFCIAI+EAACCGL+VVST VGGVPEVLP  MIKFAEPS  +L   L  AI ++  V P +FHA VR MYSW  V  RT   Y  +L+A    L ARLR +   G     + C + AAL ++WRLLEW+ PA  +E+
Sbjct:  290 QLHDRVELLGAVPHAKVRDVLVRGHVFLNCSLTESFCIAILEAACCGLYVVSTRVGGVPEVLPEHMIKFAEPSAPALAEALSAAITSVRGVDPYDFHAAVRRMYSWQQVTERTTAVYDAILRAPRLTLMARLRLYNAAGVVFGPICCLIVAALFLYWRLLEWVWPAADVEV 460          
BLAST of mRNA_P-wetherbeei_contig1096.1.1 vs. uniprot
Match: A0A4D9CR75_9STRA (Glycos_transf_1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CR75_9STRA)

HSP 1 Score: 196 bits (497), Expect = 3.960e-59
Identity = 103/179 (57.54%), Postives = 128/179 (71.51%), Query Frame = 1
Query:    4 QLHDRVELLGAVPHAEVRSVLVRGHIFLNCSLTESFCIAIVEAACCGLFVVSTSVGGVPEVLPHSMIKFAEPSVASLMVGLLHAIQNLV--VSPAEFHARVRDMYSWSDVAARTERAYADVLKATPRPLAARLRSFRKVGN-FGQVMACFVTAALHMFWRLLEWLSPADGIEIAPDLPA 531
            QL DRVE+LG VPH++VR VLVRGHIFLNCSLTESFCIAI+EAA CGLFVVST VGGVPEVLP SMIKFA+P+V SL  G + A   L   V+P EFH RVR MY+W +VA RTE  Y  V +A+   L  RLR +  VG      + CF  + +++ WR++EW+ P + IE+A + P+
Sbjct:  115 QLQDRVEMLGRVPHSDVRDVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTCVGGVPEVLPPSMIKFADPTVESL-AGAIEAALPLAKEVAPTEFHRRVRHMYNWMEVARRTETVYHHVREASTPTLMERLRRYNTVGGAVAGWLCCFAVSVMYLAWRVIEWIWPREDIELAHEFPS 292          
BLAST of mRNA_P-wetherbeei_contig1096.1.1 vs. uniprot
Match: W7TP55_9STRA (Phosphatidylinositol N-acetylglucosaminyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP55_9STRA)

HSP 1 Score: 196 bits (499), Expect = 7.830e-58
Identity = 102/178 (57.30%), Postives = 128/178 (71.91%), Query Frame = 1
Query:    4 QLHDRVELLGAVPHAEVRSVLVRGHIFLNCSLTESFCIAIVEAACCGLFVVSTSVGGVPEVLPHSMIKFAEPSVASLMVGLLHAIQNLV-VSPAEFHARVRDMYSWSDVAARTERAYADVLKATPRPLAARLRSFRKVGN-FGQVMACFVTAALHMFWRLLEWLSPADGIEIAPDLPA 531
            QL DRVE+LG VPH++VR VLVRGHIFLNCSLTESFCIAI+EAA CGLFVVST VGGVPEVLP SMIKFA+P+V SL   +  A+     V+PAEFH RVR MY+W +VA RTE  Y  V +A+   L  RLR +  VG      + CF  + +++ WR++EW+ P + IE+A + P+
Sbjct:  261 QLQDRVEMLGRVPHSDVRDVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTCVGGVPEVLPPSMIKFADPTVESLAAAIEAALPLAKEVAPAEFHRRVRHMYNWMEVARRTETVYHHVREASTPTLMERLRRYNTVGGAVAGWLCCFAVSVMYLAWRVIEWIWPREDIELAHEFPS 438          
BLAST of mRNA_P-wetherbeei_contig1096.1.1 vs. uniprot
Match: A0A482SJN3_9ARCH (Phosphatidylinositol N-acetylglucosaminyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJN3_9ARCH)

HSP 1 Score: 191 bits (486), Expect = 8.000e-56
Identity = 99/176 (56.25%), Postives = 126/176 (71.59%), Query Frame = 1
Query:    4 QLHDRVELLGAVPHAEVRSVLVRGHIFLNCSLTESFCIAIVEAACCGLFVVSTSVGGVPEVLPHSMIKFAEPSVASLMVGLLHAIQ-NLVVSPAEFHARVRDMYSWSDVAARTERAYADVLKATPRP-LAARLRSFRKVGNFGQVMACFVTAALHMFWRLLEWLSPADGIEIAPDL 525
            QLHDR+ELLG+VP  +VR VLVRGHIFLNCSLTESFCIA++EAA CGL+VVST VGGVPEVLP +MI FAEP   S+   +++AI  +  V P EFH RV+ MYSW +V  RTE  Y+++  AT RP LA RL  +   G F   +AC +   LH+ WR+ E++ PA  +E+ PD+
Sbjct:  262 QLHDRMELLGSVPQNKVRDVLVRGHIFLNCSLTESFCIALLEAASCGLYVVSTKVGGVPEVLPSAMISFAEPQAESIADAVINAISISRRVYPQEFHERVKSMYSWLEVCRRTELVYSNIA-ATRRPSLALRLVRYSSSGIFSGFIACVLVTLLHLLWRVCEYIDPAKDVEVCPDI 436          
BLAST of mRNA_P-wetherbeei_contig1096.1.1 vs. uniprot
Match: A0A0L0HD82_SPIPD (Phosphatidylinositol N-acetylglucosaminyltransferase n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HD82_SPIPD)

HSP 1 Score: 187 bits (475), Expect = 3.580e-54
Identity = 94/174 (54.02%), Postives = 118/174 (67.82%), Query Frame = 1
Query:    7 LHDRVELLGAVPHAEVRSVLVRGHIFLNCSLTESFCIAIVEAACCGLFVVSTSVGGVPEVLPHSMIKFAEPSVASLMVGLLHAIQNL---VVSPAEFHARVRDMYSWSDVAARTERAYADVLKATPRPLAARLRSFRKVGNFGQVMACFVTAALHMFWRLLEWLSPADGIEIAP 519
            L DRV+LLGAV HA VR VLVRGHIFLN SLTE+FCIAIVEAACCGL VVST VGGVPEVLP  M+ FAEP    L+  L  AI+ +     +P  FH RV+DMY+WSDVA RTE  Y  ++      L  RL+ + + G +  ++AC + A  ++ W  LEWL P + I+++P
Sbjct:  252 LQDRVKLLGAVDHARVRDVLVRGHIFLNTSLTEAFCIAIVEAACCGLLVVSTRVGGVPEVLPEDMVLFAEPDEKDLVSSLSRAIETIRTDAPNPLRFHQRVKDMYNWSDVAERTEMVYDTIMTDPHLSLVERLQRYHECGVYAGILACMIVALDYLIWLFLEWLLPREDIDVSP 425          
BLAST of mRNA_P-wetherbeei_contig1096.1.1 vs. uniprot
Match: A0A5A8C4Y8_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C4Y8_CAFRO)

HSP 1 Score: 184 bits (466), Expect = 1.780e-53
Identity = 102/175 (58.29%), Postives = 113/175 (64.57%), Query Frame = 1
Query:    4 QLHDRVELLGAVPHAEVRSVLVRGHIFLNCSLTESFCIAIVEAACCGLFVVSTSVGGVPEVLPHSMIKFAEPSVASLMVGLLHAIQNLV-VSPAEFHARVRDMYSWSDVAARTERAYADVLKATPRPLAARLRSFRKVGNFGQVMACFVTAALHMFWRLLEWLSPADGIEIAPDL 525
            QL DRVELLGAV H+ VR VL RGHIFLNCSLTESFCIAI+EAACCGLFVVST VGGVPEVLP  MI FAEP   SL+  +  AI  L  V PA FH  V   YSW DVA RT   Y   + A   PL  RLR     G    V+   + A + + WR  EW  P +GIEIAPD+
Sbjct:  199 QLQDRVELLGAVQHSGVRDVLCRGHIFLNCSLTESFCIAILEAACCGLFVVSTRVGGVPEVLPSRMIAFAEPDPESLVEAVRRAISRLSEVDPAGFHDEVATRYSWHDVARRTSVVYDAAVAAPLTPLLERLRRLFSCGLAQGVIGLIMAAFVFVVWRWTEWAVPREGIEIAPDM 373          
BLAST of mRNA_P-wetherbeei_contig1096.1.1 vs. uniprot
Match: A0A397UQ26_9GLOM (Phosphatidylinositol N-acetylglucosaminyltransferase n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397UQ26_9GLOM)

HSP 1 Score: 183 bits (465), Expect = 7.360e-53
Identity = 95/177 (53.67%), Postives = 118/177 (66.67%), Query Frame = 1
Query:    7 LHDRVELLGAVPHAEVRSVLVRGHIFLNCSLTESFCIAIVEAACCGLFVVSTSVGGVPEVLPHSMIKFAEPSVASLMVGLLHAIQNLVVS---PAEFHARVRDMYSWSDVAARTERAYADVLKATPRPLAARLRSFRKVGNFGQVMACFVTAALHMFWRLLEWLSPADGIEIAPDLP 528
            LHDRVE LG V H EV SVL +GHIFLN SLTE+FCI +VEAACCGL VVST VGGVPEVLP  MI F++P    L+  +L AI+ + +    P +FH  +++MYSWS+VA RTE+ Y  + K    PL  RLR +   G +   + C V A  ++FWR LEWL P D I+IAP  P
Sbjct:  245 LHDRVEFLGPVMHHEVHSVLTKGHIFLNTSLTEAFCIGMVEAACCGLLVVSTKVGGVPEVLPRHMIIFSKPEEEDLVNAVLKAIKMIRLKEAVPTKFHDEIKEMYSWSNVAERTEKVYDKIWKLKTPPLMERLRRYYGCGIWAGKIFCIVMAVDYLFWRFLEWLFPTDEIDIAPAFP 421          
BLAST of mRNA_P-wetherbeei_contig1096.1.1 vs. uniprot
Match: A0A4P9WGV2_9FUNG (Phosphatidylinositol N-acetylglucosaminyltransferase n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WGV2_9FUNG)

HSP 1 Score: 183 bits (465), Expect = 9.130e-53
Identity = 95/174 (54.60%), Postives = 117/174 (67.24%), Query Frame = 1
Query:    7 LHDRVELLGAVPHAEVRSVLVRGHIFLNCSLTESFCIAIVEAACCGLFVVSTSVGGVPEVLPHSMIKFAEPSVASLMVGLLHAIQNLVVSPAE---FHARVRDMYSWSDVAARTERAYADVLKATPRPLAARLRSFRKVGNFGQVMACFVTAALHMFWRLLEWLSPADGIEIAP 519
            L +RV+LLGAV H+++R VLVRGHIFLN SLTE+FCIAIVEAACCGL VVST VGGVPEVLP  M+ FA+P    LM  +  AI+ +  SP +    H  V  MY+WSDVA RTER Y  +++    PL  RLR F   G +   +AC + A  H+ W  LEWL P  GI++AP
Sbjct:  240 LQERVQLLGAVIHSKIRDVLVRGHIFLNTSLTEAFCIAIVEAACCGLMVVSTRVGGVPEVLPSHMMIFAQPDEDDLMESIESAIKIIETSPPDPYSLHEEVNRMYNWSDVAERTERVYEVIMREPRLPLIDRLRRFYGCGLYAGKLACMIVAVHHLLWVFLEWLVPRSGIDVAP 413          
BLAST of mRNA_P-wetherbeei_contig1096.1.1 vs. uniprot
Match: D8LMM7_ECTSI (Phosphatidylinositol N-acetylglucosaminyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMM7_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 1.430e-52
Identity = 98/134 (73.13%), Postives = 107/134 (79.85%), Query Frame = 1
Query:    4 QLHDRVELLGAVPHAEVRSVLVRGHIFLNCSLTESFCIAIVEAACCGLFVVSTSVGGVPEVLPHSMIKFAEPSVASLMVGLLHAIQNLVVS-PAEFHARVRDMYSWSDVAARTERAYADVLKATPRPLAARLRS 402
            QLHDRVE+LGAVPHA VRSVLVRGHIFLNCSLTESFCIAI+EAA CGLFVVST+VGGVPEVLP  MIKFAEP+V  L   L  AI     + P+EFHA+VRDMYSW+DVA RTERAY   LKA P  L  R +S
Sbjct:  252 QLHDRVEILGAVPHARVRSVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTAVGGVPEVLPGPMIKFAEPTVEDLTDALSDAIPLARKAVPSEFHAKVRDMYSWADVAERTERAYERALKAPPPSLVRRFQS 385          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1096.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2DRR2_9STRA1.160e-6159.09Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1GBW6_9STRA2.910e-6061.40Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
A0A4D9CR75_9STRA3.960e-5957.54Glycos_transf_1 domain-containing protein n=1 Tax=... [more]
W7TP55_9STRA7.830e-5857.30Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
A0A482SJN3_9ARCH8.000e-5656.25Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
A0A0L0HD82_SPIPD3.580e-5454.02Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
A0A5A8C4Y8_CAFRO1.780e-5358.29Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A397UQ26_9GLOM7.360e-5353.67Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
A0A4P9WGV2_9FUNG9.130e-5354.60Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
D8LMM7_ECTSI1.430e-5273.13Phosphatidylinositol N-acetylglucosaminyltransfera... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1096contigP-wetherbeei_contig1096:8..1188 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog109760.SPPG_06357T0
Preferred nameSPT14
PFAMsGlycos_transf_1,PIGA
Model size552
Max annot lvl4751|Fungi
KEGG koko:K03857
KEGG ReactionR05916
KEGG Pathwayko00563,ko01100,map00563,map01100
KEGG ModuleM00065
Hectar predicted targeting categoryother localisation
GOsGO:0000506,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0017176,GO:0019538,GO:0019637,GO:0031984,GO:0032991,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0071704,GO:0090407,GO:0098796,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1903509,GO:1990234
Exons4
Evalue5.86e-55
EggNOG OGsCOG0438@1|root,KOG1111@2759|Eukaryota,38ENZ@33154|Opisthokonta,3NWSA@4751|Fungi
Ec32 ortholog descriptionN-acetylglucosaminyl-phosphatidylinositol biosynthetic protein PigA, family GT4
Ec32 orthologEc-06_003950.2
EC2.4.1.198
DescriptionPhosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit
Cds size552
COG categoryIMO
CAZyGT4
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185891.7314322-CDS-P-wetherbeei_contig1096:7..2411683185891.7314322-CDS-P-wetherbeei_contig1096:7..241Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1096 8..241 +
1683185891.7477477-CDS-P-wetherbeei_contig1096:417..4531683185891.7477477-CDS-P-wetherbeei_contig1096:417..453Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1096 418..453 +
1683185891.7568674-CDS-P-wetherbeei_contig1096:652..7931683185891.7568674-CDS-P-wetherbeei_contig1096:652..793Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1096 653..793 +
1683185891.7674344-CDS-P-wetherbeei_contig1096:1047..11881683185891.7674344-CDS-P-wetherbeei_contig1096:1047..1188Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1096 1048..1188 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1096.1.1prot_P-wetherbeei_contig1096.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1096 8..1188 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1096.1.1

>prot_P-wetherbeei_contig1096.1.1 ID=prot_P-wetherbeei_contig1096.1.1|Name=mRNA_P-wetherbeei_contig1096.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=184bp
QQLHDRVELLGAVPHAEVRSVLVRGHIFLNCSLTESFCIAIVEAACCGLF
VVSTSVGGVPEVLPHSMIKFAEPSVASLMVGLLHAIQNLVVSPAEFHARV
RDMYSWSDVAARTERAYADVLKATPRPLAARLRSFRKVGNFGQVMACFVT
AALHMFWRLLEWLSPADGIEIAPDLPAPSIVATH
back to top

mRNA from alignment at P-wetherbeei_contig1096:8..1188+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1096.1.1 ID=mRNA_P-wetherbeei_contig1096.1.1|Name=mRNA_P-wetherbeei_contig1096.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1181bp|location=Sequence derived from alignment at P-wetherbeei_contig1096:8..1188+ (Phaeothamnion wetherbeei SAG_119_79)
CAACAGCTGCACGACCGCGTGGAGCTGTTGGGGGCCGTACCGCACGCCGA GGTGCGCAGTGTTTTGGTGCGCGGCCACATCTTTCTGAACTGCTCGCTGA CCGAGTCATTCTGCATCGCCATCGTCGAGGCGGCCTGCTGCGGGCTCTTC GTCGTCAGCACGAGCGTGGGGGGAGTGCCCGAGGTGCTGCCGCACTCGAT GATCAAGTTTGCCGAGCCGAGCGTCGCGTCGCTTGTGGCCGCACTCGCCG ATGCCATCCCGCTGGCGCGCAAGGCGAGGAAGCGAGAGAAAGGGCAGGAC GGGGGCGATTGGCGGTTATAAACGTTTGAAATATGGGCGGAGGAAGGAAG GAAGGAATGGCTGAGGTTTTTGGTTTCGGTTTGGGTGTTTTTTGGTTGCT AGAGCTTTAGATGGTGGGATTGCTGCATGCCATCCAAAACTTGGTTGTCA GCCACGCTGCTGCGTCGCTTCGATTCTTTTTTGATGCTGTCATTAGTTAT AGCCTTAGGCGTTTCACTTACTTCATACGCTGCCGTGACCATTACTCACA GCATTTCGGCTGCTCCTTTAACTGGCGGGTGGCTTGTCGTTCCTGTTCTT TGCGTCTGCTCGGCTTCACTCTGCCCTATTCCGCTCTGCATGCAGGTGTC GCCGGCAGAGTTCCATGCGCGGGTGCGGGACATGTACAGCTGGTCGGACG TGGCAGCACGCACAGAGCGCGCCTACGCCGACGTGCTGAAGGCAACACCC AGGCCGCTCGCCGCGCGCCTCCGCTCTTTCCGCAAGGTGCGGTGGCGGCA GCGGCATACTCGTGAGAGCTATGCTGTGGTGACTGCAAAGGGTGCTGCTC TGTTAAAATTCCCTGTGTGTCCGGCGAACAAGGTGGCATACTTGCCCGGG TTTCTAAATTTTTTGAGACGCGGTAAATGTCTTTCTCCTTTCGCATGGCG GGTGCATTGCGCGACCTTCGTTGCTGTACCGACTTCCTGCGCTCGCGCTC GCCTCTTTGTCCTCTTCCTCCAATCTGTGCATTAAGCTAGGTCGGAAACT TCGGGCAGGTGATGGCGTGCTTCGTCACGGCGGCGTTGCACATGTTCTGG CGGCTGTTGGAGTGGCTCTCGCCAGCGGACGGCATCGAGATAGCCCCGGA CCTGCCGGCACCTAGCATTGTGGCGACACAC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1096:8..1188+

>mRNA_P-wetherbeei_contig1096.1.1 ID=mRNA_P-wetherbeei_contig1096.1.1|Name=mRNA_P-wetherbeei_contig1096.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=552bp|location=Sequence derived from alignment at P-wetherbeei_contig1096:8..1188+ (Phaeothamnion wetherbeei SAG_119_79)
CAACAGCTGCACGACCGCGTGGAGCTGTTGGGGGCCGTACCGCACGCCGA
GGTGCGCAGTGTTTTGGTGCGCGGCCACATCTTTCTGAACTGCTCGCTGA
CCGAGTCATTCTGCATCGCCATCGTCGAGGCGGCCTGCTGCGGGCTCTTC
GTCGTCAGCACGAGCGTGGGGGGAGTGCCCGAGGTGCTGCCGCACTCGAT
GATCAAGTTTGCCGAGCCGAGCGTCGCGTCGCTTATGGTGGGATTGCTGC
ATGCCATCCAAAACTTGGTTGTGTCGCCGGCAGAGTTCCATGCGCGGGTG
CGGGACATGTACAGCTGGTCGGACGTGGCAGCACGCACAGAGCGCGCCTA
CGCCGACGTGCTGAAGGCAACACCCAGGCCGCTCGCCGCGCGCCTCCGCT
CTTTCCGCAAGGTCGGAAACTTCGGGCAGGTGATGGCGTGCTTCGTCACG
GCGGCGTTGCACATGTTCTGGCGGCTGTTGGAGTGGCTCTCGCCAGCGGA
CGGCATCGAGATAGCCCCGGACCTGCCGGCACCTAGCATTGTGGCGACAC
AC
back to top