mRNA_P-wetherbeei_contig10950.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10950.1.1 vs. uniprot
Match: D8LMW6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMW6_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 1.020e-18 Identity = 73/177 (41.24%), Postives = 103/177 (58.19%), Query Frame = 1 Query: 1 DTVGDLVGKID---GNGSEGVQGLGTSAE-GDGVAEATQSIARLGLRNGDFLYARATNGDAAVAARAQAKADAL-RVRAAEEASAAAAREFSPFPDLARPPRPRLSKRGMGLAELQAIRDQTFKVVPQKEANVKKASVVFAAFADWTAYARALPEGQQRSALMFGTVDEKARMVKVE 516 DT+ ++GK+ G+G G +GL T A G A+ S+A LGL NGDFLY ++ D+A A A+AK+DAL R++AA +F PFP ARPP PR +KR +++A++ QTF + PQK++NVKK SV +A D+ Y + + R AL+FG V VK E Sbjct: 100 DTIDGILGKLGMEKGDGGSG-EGLSTDASAGSSTADGATSVAALGLGNGDFLYVKS---DSAARAAAKAKSDALGRMKAAVVGDKTGGSKFVPFPQHARPPPPRATKRVKTWQDIEAMQAQTFSLKPQKDSNVKKISVEQSAMDDFVGYLKQTGLRKHRCALLFGRVSPSTNGVKRE 272
BLAST of mRNA_P-wetherbeei_contig10950.1.1 vs. uniprot
Match: A0A1X6NX33_PORUM (NPL4 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NX33_PORUM) HSP 1 Score: 77.4 bits (189), Expect = 2.170e-11 Identity = 72/236 (30.51%), Postives = 101/236 (42.80%), Query Frame = 1 Query: 769 RACHIASLLGLRPVGWCVVHDKRKHFLSAAEVVTAAQLQAWAMRSFGRAAGALQVTATVPVDRAADTAATEVYTVSNQTVQMMHERVVEVH-QPSPAGDRLLMTEPVSDDGKEVTEVDTLGLVNAVAVIQHKGFLRTAFPRRKTAGAGANDDDGNEAAAAAELLALRKCLFAKRDDSTSAFLRRLADFRLLLYVSQQVGLSDDFARLCRCVRSGDAADPVVGKYKLVLETLCAGDG 1473 RA +A LGLR VG R+ LS +V A+ R +G AA A V V + T E Y +S Q V M+ VV+ + P +LL +EPV +GKEVT V T + V + H+G+LR+AFP EL A D+ F RR++DF LLL++S + + D RL V Y+L++E + G Sbjct: 320 RAERLAGWLGLRQVGIIFSARPRRCLLSGRDVAIVAEAVLSVERRYGAAAAASFVAVVVTLAEDGQTLF-EAYQISEQAVAMVRAGVVKPPAEQKPNSGKLLTSEPVFVEGKEVTAVHTEFFLVNVPIRAHEGWLRSAFPVESR-----------------ELAPQTVGHMAAALDTGMPFYRRVSDFHLLLFLSNMLDMDVDMPRLAAAVAQQRELTADEDGYRLMIEAFASPSG 537
BLAST of mRNA_P-wetherbeei_contig10950.1.1 vs. uniprot
Match: A0A7S2GWV2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GWV2_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 3.390e-11 Identity = 76/239 (31.80%), Postives = 119/239 (49.79%), Query Frame = 1 Query: 778 HIASLLGLRPVGWCVVHDKRKHF--LSAAEVVTAAQLQAWAMRSFGRAAGALQVT--ATVPVDRAAD-TAATEVYTVSNQTVQMMHERVVEVHQPSPAGDRLLMTEPVSDDGKEVTEVDTLGLVNAVAVIQH--KGFLRTAFPRRKTAGAGANDDDGNEAAAAAELLALRKCLFAKRDDSTSAFLRRLADFRLLLYVSQQVGLSDDFARLCRCVRSGDAADPVVGKYKLVLETLCAGDG 1473 ++ASLLGLR VGW H R+ LSAAEV+ AA+LQ AAG ++ T TV V D + E + VS Q ++M+ E+ +E+ P+P + T +GK V+ + V ++QH + F+ T FP+ AN D + + E+ K +K S F+ L+DF LLLY+ Q + ++ D ++C V + D P+ YK+++ +L DG Sbjct: 274 NLASLLGLRKVGWIFGHPPREEGFQLSAAEVIMAAELQL-------EAAGGVEQTPFVTVKVTVGDDGNVSFEAFQVSRQCMEMVAEQALEIG-PNPGFCYVNETFTAIQEGKPSKTVENNFFLTVVPIVQHVSETFV-TQFPK-------ANRDHDDRTQSHDEM----KRQLSKSGSSGWTFIDLLSDFALLLYLCQFLDVNTDIPKICDSVVNRDV--PLDDGYKIIISSLAGMDG 490
BLAST of mRNA_P-wetherbeei_contig10950.1.1 vs. uniprot
Match: A0A7S3LCW4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LCW4_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 4.000e-10 Identity = 75/242 (30.99%), Postives = 115/242 (47.52%), Query Frame = 1 Query: 766 ERACHIASLLGLRPVGWCVVHDKRKH--FLSAAEVVTAAQLQAWAMRSFGRAAGALQVT--ATVPVDRAAD-TAATEVYTVSNQTVQMMHERVVEVHQPSPAGDRLLMTEPVSDDGKEVTEVDTLGLVNAVAVIQHKGFLRTA-FPRRKTAGAGANDDDGNEAAAAAELLALRKCLFAKRDDSTSAFLRRLADFRLLLYVSQQVGLSDDFARLCRCVRSGDAADPVVGKYKLVLETLCAGDG 1473 +R IA +LGLR VGW + H+ R+ L+ AEV+ A +LQ AAG ++ T TV V D A E + VS Q ++M+ E +EV+ + + T +GK V+ + V ++QH A FPR +D + A EL +K + F+ RLADF LLLY+SQ + + DFA++C V D + + YKL++++L +G Sbjct: 242 DRVDEIAEMLGLRKVGWILGHEAREPGLVLTNAEVIMAGELQL-------EAAGGIEDTPFVTVVVKPGEDGLVAVEAFQVSKQCMEMVAEEALEVNVENLKVCNVNETFTAIQEGKPSPTVENDFFICVVPIVQHNSETFVADFPRLNRE---LDDRTPSHDALKREL--------SKAGSAGWTFVDRLADFNLLLYLSQFLDVDADFAKICASVV--DRSVELNDGYKLIIKSLAGLEG 463
BLAST of mRNA_P-wetherbeei_contig10950.1.1 vs. uniprot
Match: D2UZ40_NAEGR (NPL4 family protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UZ40_NAEGR) HSP 1 Score: 70.9 bits (172), Expect = 1.980e-9 Identity = 64/233 (27.47%), Postives = 114/233 (48.93%), Query Frame = 1 Query: 766 ERACHIASLLGLRPVGWCVVHD-KRKHFLSAAEVVTAAQLQAWAMRSFGRAAGALQVTATVPVDRAADTAATEVYTVSNQTVQMMHERVVEVHQPSPAGDRLLMTEPVSDDGKEVTEVDTLGLVNAVAVIQHKGFLRTAFPRRKTAGAGANDDDGNEAAAAAELLALRKCLFAKRDDSTSAFLRRLADFRLLLYVSQQVGLSDDFARLCRCVRSGDAADPVVGKYKLVLETLC 1461 +RA +AS+LG++ VGW HD +R++ L E++ AA+ Q+ SF VT T + + E Y VS Q V++ + ++ + + + L+ + V + K ++D L LV+ VA+ HK + FP R G N+ N ++ L+ L +R F++R++DF LLL+++ + LS DF LC V S + + + ++ ++ C Sbjct: 226 DRADTLASMLGMKKVGWIFSHDGQREYPLLGPEIIKAAEYQSKYGPSF--------VTITACPNEIGEIQF-EAYQVSKQCVELWEKGLLSENPENL--EFLIAKKQVEIERKMTNDIDALLLVSNVAIAPHKSSFQVGFPPRNRPG---NEMFQN-------MVELKSVLLERRSQK---FVQRVSDFDLLLFLTDYLSLSSDFPGLCEAVLSQNNSQATI--FEELINAYC 432
BLAST of mRNA_P-wetherbeei_contig10950.1.1 vs. uniprot
Match: A0A7S4JEK5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JEK5_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.380e-9 Identity = 72/244 (29.51%), Postives = 115/244 (47.13%), Query Frame = 1 Query: 760 DVERACHIASLLGLRPVGWCVVHDKRKHF--LSAAEVVTAAQLQAWAMRSFGRAAGALQVT--ATVPVDRAAD-TAATEVYTVSNQTVQMMHERVVEVHQPSPAGDRLLMTEPVSDDGKEVTEVDTLGLVNAVAVIQHKG-FLRTAFPRRKTAGAGANDDDGNEAAAAAELLALRKCLFAKRDDSTSAFLRRLADFRLLLYVSQQVGLSDDFARLCRCVRSGDAADPVVGKYKLVLETLCAGDG 1473 D E ++AS+LGLR VGW H R+ LSAAEV+ AA+LQ AAG ++ T TV V D + E + VS Q ++M+ E ++V P+P + T +GK V+ + V ++QH + FPR N D + + E+ K +K + F+ L+DF LLLY+ + + + D ++C V + D P+ YK+++ ++ DG Sbjct: 271 DEETVENLASMLGLRRVGWIFGHPPREEGFQLSAAEVIMAAELQL-------EAAGGVEPTPFVTVKVTVGDDGNVSFEAFQVSRQCMEMVAEEALQVG-PNPGFCGVSDTFTAIQEGKNSKTVENNFFLTVVPIVQHASETFVSQFPRP-------NRDHDDRTQSHEEM----KRQLSKSGSAGWTFVDLLSDFNLLLYLCKFLDAATDMPKICESVVNRDV--PLDDGYKIIITSMAGMDG 493
BLAST of mRNA_P-wetherbeei_contig10950.1.1 vs. uniprot
Match: A0A7S4QJ61_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QJ61_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 4.420e-9 Identity = 72/233 (30.90%), Postives = 113/233 (48.50%), Query Frame = 1 Query: 778 HIASLLGLRPVGWCVVHDKRKHF--LSAAEVVTAAQLQAWAMRSFGRAAGALQVT--ATVPVDRAAD-TAATEVYTVSNQTVQMMHERVVEVHQPSPAGDRLLMTEPVSDDGKEVTEVDTLGLVNAVAVIQH-KGFLRTAFPRRKTAGAGANDDDGNEAAAAAELLALRKCLFAKRDDSTSAFLRRLADFRLLLYVSQQVGLSDDFARLCRCVRSGDAADPVVGKYKLVLETL 1458 ++ASLLGL+ VGW H R+ LSAAEV+ AA+LQ AA ++ T TV V D + E + VS Q ++M+ E+ +EV P+P + T +GK V+ + V ++QH T FP+ AN D + + E+ K +K S F+ L+DF LLLY+ Q + ++ D ++C V + D P+ YK+++ +L Sbjct: 209 NLASLLGLKRVGWIFGHPPREEGFQLSAAEVIMAAELQL-------EAADGVEQTPFVTVKVTVGDDGNVSFEAFQVSRQCMEMVAEQALEVG-PNPGFCYVNETFTAIQEGKASKTVENNFFLTVVPIVQHVSDVFVTQFPK-------ANRDHDDRTQSHDEM----KRQLSKSGSSGWTFIDLLSDFSLLLYLCQFLDVNTDIPKICDSVVNRDV--PLDDGYKIIIASL 420
BLAST of mRNA_P-wetherbeei_contig10950.1.1 vs. uniprot
Match: A0A7S3VCP6_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VCP6_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 2.920e-7 Identity = 69/236 (29.24%), Postives = 113/236 (47.88%), Query Frame = 1 Query: 781 IASLLGLRPVGWCVVHDKR-KHF-LSAAEVVTAAQLQAWAMRSFGRAAGALQVTATVPVDRAAD-TAATEVYTVSNQTVQMMHERVVEVHQPSPAGDRLLMTEPVSDDGKEVTEVDTLGLVNAVAVIQH--KGFLRTAFPRRKTAGAGANDDDGNEAAAAAELLALRKCLFAKRDDSTSAFLRRLADFRLLLYVSQQVGLSDDFARLCRCVRSGDAADPVVGKYKLVLETLCAGDG 1473 +ASLLGLR VGW H R K F +S+AE+V AA+LQ + TV V A D + E + VS Q ++M+ E + V + +P + T +GKE ++ + V + QH + F+ + FP+ AN D + E+ K +K + F+ LADF LL+Y+++ + + D ++CR + + D P+ YKL++ ++ DG Sbjct: 292 VASLLGLRKVGWIFGHPPREKGFQMSSAEIVMAAELQIECAEDVAQTPFV-----TVKVTVADDGNVSMEAFQVSKQCMEMVAEEALVVGE-NPGFCYVSDTFTAIQEGKESRTIENNFFLTVVPINQHATETFV-SEFPK-------ANRDHDTRQQSHDEM----KKQLSKSGSAGWTFIDLLADFNLLIYLTKFLDIETDIPKICRSIVNRDI--PLEEGYKLIIASMAGLDG 507 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10950.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10950.1.1 >prot_P-wetherbeei_contig10950.1.1 ID=prot_P-wetherbeei_contig10950.1.1|Name=mRNA_P-wetherbeei_contig10950.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=389bp MGLAELQAIRDQTFKVVPQKEANVKKASVVFAAFADWTAYARALPEGQQRback to top mRNA from alignment at P-wetherbeei_contig10950:202..2156- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10950.1.1 ID=mRNA_P-wetherbeei_contig10950.1.1|Name=mRNA_P-wetherbeei_contig10950.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1955bp|location=Sequence derived from alignment at P-wetherbeei_contig10950:202..2156- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10950:202..2156- >mRNA_P-wetherbeei_contig10950.1.1 ID=mRNA_P-wetherbeei_contig10950.1.1|Name=mRNA_P-wetherbeei_contig10950.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1167bp|location=Sequence derived from alignment at P-wetherbeei_contig10950:202..2156- (Phaeothamnion wetherbeei SAG_119_79)back to top |