mRNA_P-wetherbeei_contig10947.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10947.1.1
Unique NamemRNA_P-wetherbeei_contig10947.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10947.1.1 vs. uniprot
Match: A0A7C4TY04_9HYPH (AsmA family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TY04_9HYPH)

HSP 1 Score: 363 bits (932), Expect = 2.070e-107
Identity = 254/729 (34.84%), Postives = 381/729 (52.26%), Query Frame = 1
Query:    1 LNGHYRFRGNIDWHGSQREIRLGTSQREPDGKVRYKASVRAPQNGNLYVLDGVLSELSPAGRHTGTLTAKLPLANIIPASAQGRRAGAGGGRNADMIELTAAVEGDIDGVRVDNMAFSFEHDGKPQLLSGASSANWRHGLRMETRLASRWLDLDQIAGMAPQASPLQLIRHLIGQVSAVLPPDGSSLLTVDVDQVNLGGTPLSGVRLALARAGGLTSIGELRATLPGNSRAELRGTLGAVQGGGSTGQDT--FDGEIVLRGGSYQRFGAWAGAGGLIGQEEAKQSGRADAPFSLTSKLRLQPERVMLSNTSLELAGRHAAASLDWNWGQQRRLDVVAEGNAIDVRSFAPGLLNLTSEPGTPAADKARQTGFPLLARLADRIEAVNRAVG---DMKLQLRTGELTDGATTLRDVEADVTVGAGRLTIATLRVGSPANGHIELQGEIKSLDSKLASKPQASLRGWLSADNAAAVADLAGLLPSSGRSASRNWLQNANHLDTSFTLELGARPDDRLTLAAVGAIDGIEHDVELKLDGGLTGWRQAPITLRMTLDGPASSSTIRGMMLPGSAQAVPATLAKPEAARP---ARLQIDAAGATAESIVASARLELASTATVTYQGRSSISEDGGVDLSGTLNLAAPNTAAFVAFVTGGPVPQIPAAVTAGTVSVERKWGTTSLASRNLEIGASRVAGQATIARSGERT----RIDANLTASLLDLPSLMGLVLDG 2151
            L G Y+FRGN  W+G+ REIRL TS  EPDG++R+K +V    NGN Y LDG L +L+ A R  G LTA+L L            AGAG      + +L ++   D  G R+ +++ S+E DGKPQLL+G +  +W+  L +  RL SRWLDLD+IAG A   SPL+  R L   ++ ++P +G++  T+D++Q  LGG  +SG+R+ L R+GG   + E +A LPGN R  L+GT+         G D   F G+++LRG S  RF AWA A G  G+  A     A+ PF L S+L L P  + LSN + E+ G     +L + W   R L V  +G +ID+ +  PGLL                       RLA  +   +R+      ++L++R  E+ DGAT   DV+AD+ +  G L +  L+  SP    +++QG++  +    A +P  +LRG++SA  A AVA L GLL S+    +R    + +  D +FT   G+R   RLT+ + G +        + L+GGL GWR+API   + L+GP     + G             +++P  + P   A   +  AG++A S+   A LE      +T++G+S++   G + +SG L L   +       V      ++     AG V +  K GT  L  R L +G SR+ GQ T+A SGE+     RI+  L A+   L  L+G+++DG
Sbjct:  179 LEGPYKFRGNALWNGAPREIRLSTSAFEPDGRLRFKLTVHVYANGNAYTLDGTLLDLARAARVEGDLTAQLRLDT----------AGAGRIGEPTVFDLRSSFTADGRGARLGDLSLSYERDGKPQLLNGEARVSWQARLELAARLTSRWLDLDRIAGRANDVSPLESARALAQGMTELVPSEGTARATLDIEQAQLGGETVSGLRVGLERSGGALKVQEFKAALPGNVRLNLKGTI--------VGDDARAFSGDLMLRGVSLGRFLAWA-APGTSGESTA-----AEGPFWLASELSLSPAHIELSNANAEVGGAQIQGNLRYRWDGGRELAVALDGASIDLSAVVPGLLGE--------------------GRLAAMLWPASRSASHPQSVRLRIRADEVIDGATRFTDVDADIFLSGGTLRLPVLKFTSPHGLRVDMQGDVNDV----AGRPSGALRGFVSAPTAEAVAALGGLLGSAPPLPARLLPSDISSFDLAFTAAFGSRAGSRLTIRSDGMVQQSRATATILLEGGLAGWREAPIDATLKLEGPDVIPLLAG------------AVSRPSESSPSNTASFALKVAGSSAASLFTFAELERGEDR-LTFRGQSALDAAGALGVSGELLLTVADLGEAQQLVQWRRRLRLAGIGVAGLVDIAAKGGTVRLEPRGLMVGTSRLTGQLTLA-SGEQNEQKLRIEGRLRANQAPLQGLLGMLVDG 845          
BLAST of mRNA_P-wetherbeei_contig10947.1.1 vs. uniprot
Match: A0A2W4RJB4_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RJB4_9PROT)

HSP 1 Score: 296 bits (758), Expect = 6.740e-83
Identity = 225/729 (30.86%), Postives = 362/729 (49.66%), Query Frame = 1
Query:    1 LNGHYRFRGNIDWHGSQREIRLGTSQREPDGKVRYKASVRAPQNGNLYVLDGVLSELSPAGRHTGTLTAKLPLAN----IIPASAQG--RRAGAGGGRNADMIELTAAVEGDIDGVRVDNMAFSFEHDGKPQLLSGASSANWRHGLRMETRLASRWLDLDQIAGMAPQASPLQLIRHLIGQVSAVLPPDGSSLLTVDVDQVNLGGTPLSGVRLALARAGGLTSIGELRATLPGNSRAELRGTLGAVQGGGSTGQDTFDGEIVLRGGSYQRFGAWAGAGGLIGQEEAKQSGRADAPFSLTSKLRLQPERVMLSNTSLELAGRHAAASLDWNWGQQRRLDVVAEGNAIDVRSFAPGLLNLTSEPGTPAADKARQTGFPLLARLADRIEAVNRAVGDMKLQLRTGELTDGATTLRDVEADVTVGAGRLTIATLRVGSPANGHIELQGEIKSLDSKLASKPQASLRGWLSADNAAAVADLAGLLPSSGRSASRNWLQNANHLDTSFTLELGARPDDRLTLAAVGAIDGIEHD----VELKLDGGLTGWRQAPITLRMTLDGPASSSTIRGMMLPGSAQAVPATLAKPEAARPARLQIDAAGATAESIVASARLELASTATVTYQGRSSISEDGGVDLSGTLNLAAPNTAAFVAFVTGGPVP-QIPAAVTAGTVSVERKWGTTSLASRNLEIGASRVAGQATIARSGERTRIDANLTASLLDLPSLMGLVLDGA 2154
            L G YR R ++ W+   RE+R+ T+  +PDG  R K +VRAP  GN Y+ DG + +L    +  G LTA +P+ +    + P +A+G  + +   G     + E+ A V       ++ +++FSFE +G+PQLL+G + A+W     ++  LASRWLDLD+IA + P+A+ L  IR+L   V   LP +      + +DQ NL G  +S + +++   GG  +I + +A LPG+SR EL G+L      GS   + FDGEI+LRGG++ RF AWA  G    +       R+DA FS + +L+L  E + L+N S++         + + W  +R+L +  E    D+    PG L     P    A+ +   G    + L++   A + A  D++L +R   LTDG   L +V+A++ +  G L+I  LR  +P    +E+ G +       A++   SL G + A   AA+A+   +         R WL     L  +F+++ G R     T+A +  IDG  H       L L GG+ GWR AP+ + +T D P  +   RG++L G      A+    +A    RL + A G T E   A     +     ++ QGR S+  +      G +  AA +TA+ +    G P P Q       GT+ ++   G  +L   +L+I  +++ GQ  ++ S     +D +L A    LP ++ L LDG+
Sbjct:  177 LEGPYRVRADVRWNSKVREVRVSTAAPDPDGSTRLKVTVRAPDTGNSYMFDGSVVDLFDRPQFDGNLTAVIPITSNREGLRPTTAEGDDQPSLPAGLLARGVFEVRANVSATAISAKLSDISFSFEQNGQPQLLTGTAEASWHDRPVVKASLASRWLDLDRIADVDPEANALTAIRNLTASVIEFLPTEAEVAANLKIDQANLAGDVISDLTVSIENTGGGLTIKQFQAALPGSSRVELAGSLS-----GSGTAEAFDGEILLRGGNFNRFIAWAARGTPFAEA------RSDAGFSFSGRLKLGEEGLELTNASVDTGPNRLNGDVAYQWEGRRKLVISLETGHADISGVLPGSLG----PDLLKANLSALAGADPGSGLSEL--AASLAEADIRLHVRADALTDGTRVLHNVDANLAIENGNLSIPNLRAYTPQGFKLEVDGTVHDF----ANRATGSLFGVVEASTPAALAEALNIGAPDLDPGKRQWLSALAPLRLAFSMQFGQRDS---TVAEI-TIDGTAHSKPLVATLHLAGGIEGWRGAPVDVMLTSDSPEVARIARGLLLGGQN----ASQTDTDAPNDGRLVLKAVG-TPEHETAVHLQFVQDALRLSLQGRGSLPANADPKFEGEMEFAAASTASALRLA-GLPQPAQASEGGLNGTLGLKADGGRLTLELSSLDIAGTQLTGQIHLSGSEGAREVDLDLKADSASLPGILALALDGS 874          
BLAST of mRNA_P-wetherbeei_contig10947.1.1 vs. uniprot
Match: A0A7C2M0V9_9HYPH (AsmA family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2M0V9_9HYPH)

HSP 1 Score: 280 bits (717), Expect = 1.960e-77
Identity = 233/736 (31.66%), Postives = 359/736 (48.78%), Query Frame = 1
Query:    1 LNGHYRFRGNIDWHGSQREIRLGTSQREPDGKVRYKASVRAPQNGNLYVLDGVLSELSPAGRHTGTLTAKLPLANII------PASA-QGRRAGAGGGRNADMIELTAAVEGDIDGVRVDNMAFSFEHDGKPQLLSGASSANWRHGLRMETRLASRWLDLDQIAGMAPQASPLQLIRHLIGQVSAVLPPDGSSLLTVDVDQVNLGGTPLSGVRLALARAGGLTSIGELRATLPGNSRAELRGTLGAVQGGGSTGQDTFDGEIVLRGGSYQRFGAWAGAGGLIGQEEAKQSGRADAPFSLTSKLRLQPERVMLSNTSLELAGRHAAASLDWNWGQQRRLDVVAEGNAIDVRSFAPG----------LLNLTSEPGTPAADKARQTGFPLLARLADRIEAVNRAVGDMKLQLRTGELTDGATTLRDVEADVTVGAGRLTIATLRVGSPANGHIELQGEIKSLDSKLASKPQASLRGWLSADNAA---AVADLAGLLPSSGRSASRNWLQNANHLDTSFTLELGARPDDRLTLAAVGAIDGIEHDVELKLDGGLTGWRQAPITLRMTLDGPASSSTIRGMMLPGSAQAVPATLAKPEAARPARLQIDAAGATAESIVASARLELASTATVTYQGRSSISEDGGVDLSGTLNLAAPNTAAFVAFVTGGPVPQIPAAVTAGTVSVERKWGTTSLASRNLEIGASRVAGQATIARSGERTRIDANLTASLLDLPSLMGLVLD 2148
            L G YRFRG+     ++RE+R+ T++ EPDG VR+KA++R     + Y LDG L++L    R  G LTA+LP++ +       P SA Q     A  G  A   +L AAV     G  + N+A SFE DG+PQL++G   A+WR  + ++  L+S WLDLD+IAG   + +PL  I  L G V  ++P +G    T+ V+Q NLG   +SG+RLALAR G    I E R  +PG +RA+L+G L      G  G  TF G + LRG S  RF AWA    +          R D  F + +++ + P +++  N   +L+G     S  + W  +  L +  +   +D R+F P           LL L   P +  A     TG   +AR A R  A      D+ L+L  G L     T RDV A+V + +GRL +  L+V       +EL+G++     + A++P+  LRG   AD  A   A+A+L G+  +    A+R   Q    L  + +L LG R      L   G ++G    ++ +LDGG +GWR  P  L   +D  A++  I  ++   +  A PA        +P R+ + A G  A+ +   A  +    A ++++G+  ++ + G    G L + A +     A     P  ++ A   +G++ V        L    L +G S V G+  ++  G+R R++A L    L L SL+  +LD
Sbjct:  179 LAGPYRFRGSFVRASAERELRVATARPEPDGSVRFKATLRPLDGASTYTLDGRLADLMGKPRIDGELTARLPISGLWQAPRGQPRSARQEATVEAEAGEAA--FDLKAAVSVGAGGAALANLALSFEQDGRPQLVTGELKASWRDEVSVDMNLSSHWLDLDRIAGAGERPAPLDSIVPLAGSVRDLVPAEGRFRATLSVEQANLGREAVSGLRLALARTGDNLEIEEFRLGMPGGTRADLQGALS-----GPPGSPTFAGSLSLRGASLLRFLAWATTSAVA------FDARGDGAFGVRARIAVAPGQIVARNMVGDLSGTAVHGSARYQWEGRPALTLDIDSPQLDARAFIPPGASLADIAAPLLQLGGGPASSPAAAPASTGA--VARSAWRPAAT-----DIVLRLNAGLLVTAGRTYRDVAAEVELKSGRLRLPLLKVAGDDGFSLELEGDVD----EAATRPKGRLRGAAGADTVAGIKALAELIGVPEALRPDAAR--AQVMLPLRLAGSLALGTRLPTSADLMVDGELNGSGASLKARLDGGQSGWRTGPADLTAVVDS-ANAGAIAALLTKATNPAPPA------GQQPGRILLKATGIPAQGLATLASADAGDVA-MSFRGQV-VAAEAGNRAVGDLEVRAADATRLAALAGLSPPLRLDAMPVSGSMRVALDGKDVVLERLGLRVGGSDVRGRMALSAPGDRRRLEARLDVDELSLASLLTPLLD 879          
BLAST of mRNA_P-wetherbeei_contig10947.1.1 vs. uniprot
Match: A0A109BJK7_HYPSL (AsmA domain-containing protein n=2 Tax=Hyphomicrobium sulfonivorans TaxID=121290 RepID=A0A109BJK7_HYPSL)

HSP 1 Score: 271 bits (694), Expect = 4.230e-74
Identity = 233/728 (32.01%), Postives = 350/728 (48.08%), Query Frame = 1
Query:    1 LNGHYRFRGNIDWHGSQREIRLGTSQREPDGKVRYKASVRAPQNG-NLYVLDGVLSELSPAGRHTGTLTAKLPLANIIPASAQGRRAGAGGGRNA--DMIELTAAVEGDIDGVRVDNMAFSFEHDGKPQLLSGASSANWRHGLRMETRLASRWLDLDQIAGMAPQA-SPLQLIRHLIGQVSAVLPPDGSSLLTVDVDQVNLGGTPLSGVRLALARAGGLTSIGELRATLPGNSRAELRGTLGAVQGGGSTGQDTFDGEIVLRGGSYQRFGAWAGAGGLIGQEEAKQSGRADAPFSLTSKLRLQPERVMLSNTSLELAGRHAAASLDWNWGQQRRLDVVAEGNAIDVRSF----APGLLNLTSEPGTPAADKARQTGFPLLARLADRIEAVNRAVGDMKLQLRTGELTDGATTLRDVEADVTVGAGRLTIATLRVGSPANGHIELQGEIKSLDSKLASKPQASLRGWLSADNAAAVADLAGLL--PSSGRSASRNWLQNANHLDTSFTLELGARPDDRLTLAAVGAIDGIEHDVELKL-DGGLTGWRQAPITLRMTLDGPASSSTIRGMMLPGSAQAVPATLAKPEAARPARLQIDAAGATAESIVASARLELASTATVTYQGRSSISEDGGVDLSGTLNLAAPNTAAFVAFVTGGPVPQIPAAVTAGTVSVERKWGTTSLASRNLEIGASRVAGQATIARSGERTRI-DANLTASLLDLPSLMGLVLD 2148
             +G + F+G   W    RE+RL T   E DG +R+KA+VR   +  + Y +DG + ++  A R +G LTAKL LA+   A AQ  RAGA  G      +I   A ++G+  G+RVD++A +FE+ G+PQL+SGA++A W   L ++  L SRWLDLD +A     A +P+   R+ IG V A LP +  S +T+D+DQ NLGG P+SG RL LAR  G+  +  LRA LPG +R  L G + A Q  G +    F G++ L G S  RF  W+  G  + +       R D  FSL  +L +    + L+   +E+AGR          G++ R+ +V EG  +D   F          + S  GT AA           A  +++    +    D  ++LR G+   G   LR+V  DV V  G+L I T R  +      +L+G+++      AS PQ +LR  +   +AAA + L  LL  P   R  +  +   A  +  + ++ LGAR      + A GA+ G    +   L DGGL  WR AP  + +T++     + I   +       +PA+ A P+      + I A G  A+++  SA L       + Y GR+ +    G  L G L L+A      ++    G    +      GTV V+     T L  R+L +G S+V+G   +A   E   I    L      +P L+ LV D
Sbjct:  179 FSGPFGFKGTTHWREGTREVRLVTGATEADGSLRFKATVRDEGDHLSSYSVDGRIDDIKNAPRISGDLTAKLALAS--GALAQANRAGAASGNKKLPPVIAFRAKIDGNATGMRVDDIAMTFENVGQPQLISGAATARWEEALSVDMGLTSRWLDLDLLATTEDGADNPIATARNFIGAVMAALPKNADSKVTLDLDQANLGGEPVSGTRLELARTDGVLHLDRLRAGLPGGTRLALDGAV-AEQASGQS----FRGDVTLHGTSLARFLDWSAKGRALAEAL-----RNDGAFSLQGQLAMSDGGIRLTEAGVEVAGRPLTGEFHLLRGERPRVQLVLEGAEVDAGQFWQAGIGAFKRVVSRNGTDAA----------AAPGSEKFAWFDPQTMDFDVRLRAGQFLAGEQKLRNVSLDVGVDGGKLAIRTCRFDTADGLKFDLEGDVRDA----ASTPQGALRWAMKVPSAAAYSTLVSLLDPPQELRDQAAIFSTLAP-MSVAGSIGLGARNSGSADITADGAVQGSGRLIATALLDGGLGNWRAAPADITLTINSSPDVARILASLGARDQAQLPAS-ATPKTGE---VFIKAVGVPAQAMAVSA-LAQGPQLFLGYDGRAVLPAASGSTLDGELRLSARGLGEVMSVAGLGGGVTLSETPVVGTVRVKSASHATELDLRDLRVGDSKVSGTLALAYPSEGPAIVTGELDVDAATVPGLLALVTD 874          
BLAST of mRNA_P-wetherbeei_contig10947.1.1 vs. uniprot
Match: A0A6I3KH06_9HYPH (AsmA family protein n=1 Tax=Hyphomicrobium album TaxID=2665159 RepID=A0A6I3KH06_9HYPH)

HSP 1 Score: 270 bits (691), Expect = 9.430e-74
Identity = 218/726 (30.03%), Postives = 349/726 (48.07%), Query Frame = 1
Query:    1 LNGHYRFRGNIDWHGSQREIRLGTSQREPDGKVRYKASVRAPQ-NGNLYVLDGVLSELSPAGRHTGTLTAKLPLAN-IIPASAQGRRAGAGGGRNADMIELTAAVEGDIDGVRVDNMAFSFEHDGKPQLLSGASSANWRHGLRMETRLASRWLDLDQIAGMAPQA-SPLQLIRHLIGQVSAVLPPDGSSLLTVDVDQVNLGGTPLSGVRLALARAGGLTSIGELRATLPGNSRAELRGTLGAVQGGGSTGQDTFDGEIVLRGGSYQRFGAWAGAGGLIGQEEAKQSGRADAPFSLTSKLRLQPERVMLSNTSLELAGRHAAASLDWNWGQQRRLDVVAEGNAIDVRSFAP---GLLNLTSEPGTPAADKARQTGFPLLARLADRIEAVNRAVGDMKLQLRTGELTDGATTLRDVEADVTVGAGRLTIATLRVGSPANGHIELQGEIKSLDSKLASKPQASLRGWLSADNAAAVADLAGL--LPSSGRSASRNWLQNANHLDTSFTLELGARPDDRLTLAAVGAI-DGIEHDVELKLDGGLTGWRQAPITLRMTLDGPASSSTIRGMMLPGSAQAVPATLAKPEAARPARLQIDAAGATAESIVASARLELASTATVTYQGRSSISEDGGVDLSGTLNLAAPNTAAFVAFVTGGPVPQIPAAVTAGTVSVERKWGTTSLASRNLEIGASRVAGQATIARSGERTRI-DANLTASLLDLPSLMGLVLD 2148
            + G + F+G  +W  ++RE+R+ T   E DG +R+KA+VRA   N   Y LDG L +L    R  G +TAK+ LA+    A+A+   AG  G + A +I+  A V GD  G+RVD +  SFEH G+PQL++G+++A W+  L +E  L+SRWLDLD++A     A SP    R+ I  +   LP +  S +  D+DQ  LGG  +S ++L +AR  G   +  LRA LPG ++  + G +       +TGQ  F G++ L G S  RF  WA     + +E      R D PFSL  +L +    + L++   E  GR     + +   ++ RL V  EG  I+   F P   G        G+ A  +A+   F  L          +    D+ L++RTG+L  G + LRDV+ DV +  GRL++   +  +     +ELQG++          P+ +++  ++A      A L GL  LP   R  +  +   A  +  + +L+LG R      +AA G + +G        LDGGL  WR AP  + +T+D    +  +      GS    P+    P+   P  +   A G  ++ + A+A  + A+     Y GR ++ +DG     G L ++A   +  ++    G    +      GT+ +      T L  + L IG S++ G   ++   E   I   +++     +PSL+G+VLD
Sbjct:  179 IQGPFAFKGTTNWRETEREVRIATGTTEADGSIRFKATVRATSGNSGTYALDGRLEDLKGRPRIDGEITAKVELASETFAAAAEPAPAGVRGKKEAPLIDFKARVAGDAKGLRVDGITLSFEHVGQPQLIAGSATAEWQDNLNVEMALSSRWLDLDKVATSRESAGSPFDTARNFISAMMEALPKNADSKVAFDLDQATLGGDAVSNIKLEVARKQGALLLNNLRAGLPGGAKLAMDGAVADA----ATGQ-AFSGDLTLHGTSLARFLDWATKDKALAEEL-----RNDGPFSLQGRLAMSERGIDLTDAGAEFGGRPITGEMRYAKKERPRLSVSLEGAEIEAGEFWPTGVGAFKRIVAGGSEAPGEAK---FAWL----------DPNTTDLHLRVRTGQLVAGQSHLRDVDLDVGIEQGRLSLRAGKFATEDGLSVELQGDVADA----LKSPRGAVQWVVAAPTRETFATLVGLFDLPEDARRKADAFATLAP-MRVAGSLQLGVRKPGAGDIAADGRVQNGGRLVASALLDGGLGNWRAAPADITLTIDSTDVAPIVASFGARGSG--APSAAGAPQ---PGEVFFKAVGTPSKGMTATASAQ-ATGLFFGYDGRITLPDDGSRAFDGDLRISARALSDAMSVAGLGSGAALSETPVVGTLKLSSANHATELTPQGLSIGGSKIDGSVALSYPSEGPAIVTGDVSVDAASIPSLLGMVLD 870          
BLAST of mRNA_P-wetherbeei_contig10947.1.1 vs. uniprot
Match: A0A2W4KS24_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4KS24_9PROT)

HSP 1 Score: 266 bits (679), Expect = 2.820e-72
Identity = 175/570 (30.70%), Postives = 288/570 (50.53%), Query Frame = 1
Query:    1 LNGHYRFRGNIDWHGSQREIRLGTSQREPDGKVRYKASVRAPQNGNLYVLDGVLSELSPAGRHTGTLTAKLP----LANIIPASAQGRRAGAGGGRNADMIELTAAVEGDIDGVRVDNMAFSFEHDGKPQLLSGASSANWRHGLRMETRLASRWLDLDQIAGMAPQASPLQLIRHLIGQVSAVLPPDGSSLLTVDVDQVNLGGTPLSGVRLALARAGGLTSIGELRATLPGNSRAELRGTLGAVQGGGSTGQDTFDGEIVLRGGSYQRFGAWAGAGGLIGQEEAKQSGRADAPFSLTSKLRLQPERVMLSNTSLELAGRHAAASLDWNWGQQRRLDVVAEGNAIDVRSFAPG-----LLNLTSEPGTPAADKARQTGFPLLARLADRIEAVNRAVGDMKLQLRTGELTDGATTLRDVEADVTVGAGRLTIATLRVGSPANGHIELQGEIKSLDSKLASKPQASLRGWLSADNAAAVADLAGLLPSSGRSASRNWLQNANHLDTSFTLELGARPDDRLTLAAVGAIDGIEHDVELKLDGGLTGWRQAPITLRMTLDGPASSSTIRGMMLPG 1683
            L G YR R ++ W+G  RE+R  T+    DG  R K +VR+P +G  YVLDG + + +   +  G+ TA LP    L  + P + +  +AG+    N+   E+ A V  +    ++ ++AFSFE +G+PQL++G + A+W+  L +++ L+SRWLDLD+IAG+    + L+ +R L   V  ++P D     ++ +DQ NL G  +SG+ +A+  +G    I ELRA LPG +R ++ G+L      GS   + F+G+I+LRG S+ RF  WA  G  + +       R++  F+++  L+L  + + LS  +++    H    L + W  Q+RL +  E    D+ +  PG     LL    E  T   + +   G  LLA LA           D+++++R   L+DG   L++V+AD+ +  GRL I  L   SP   +IEL G+++S+    A K   +LRG + A  A A+ +   +  ++  +  R  L +   L  +F    GA       +   G   G      L+ D GL  WR  P  + +  D       +RG++  G
Sbjct:  177 LEGPYRIRADVHWNGETREVRASTAAPAADGSTRIKVTVRSPHSGKSYVLDGDVRDFTGRPQFEGSFTALLPTKTDLNELRPTTVEAEQAGSNEPLNS-AFEVRAQVSANAVSAKLSDVAFSFEQEGQPQLMTGMAEASWKDQLVVKSSLSSRWLDLDRIAGVEAGTNALEAMRRLSSSVMDLIPTDAEVATSITIDQANLAGDVVSGLVMAVENSGSGLEIKELRAALPGGTRLDVTGSLS-----GSGTAEAFEGDILLRGASFSRFVEWAARGSGLSET------RSNTGFAVSGHLKLSDDGLELSKATVDTGPNHLKGDLTYYWSNQKRLSLSLETEYADLSALLPGALAPELLGQAIEALTSEQNNSSAAG--LLAELAG---------ADVRIRVRADSLSDGIRMLQNVDADLNLENGRLRIPRLTASSPKGFNIELDGDVRSV----AEKANGALRGVIEAKTAEALTEALQIGLATLGADERRRLASLAPLRLAFVSHFGASDGKGAEITIDGIAQGQPLKAALQFDDGLANWRTKPADIYLVADSTEVLQVLRGLLFGG 719          
BLAST of mRNA_P-wetherbeei_contig10947.1.1 vs. uniprot
Match: UPI00093008E7 (AsmA family protein n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI00093008E7)

HSP 1 Score: 264 bits (674), Expect = 1.870e-71
Identity = 228/767 (29.73%), Postives = 341/767 (44.46%), Query Frame = 1
Query:    1 LNGHYRFRGNIDWHGSQREIRLGTSQREPDGKVRYKASVRAPQNGNLYVLDGVLSELSPAGRHTGTLTAKLPLANII--------------------------PASAQGRRAGAGG------------------------GRNADMIELTAAVEGDIDGVRVDNMAFSFEHDGKPQLLSGASSANWRHGLRMETRLASRWLDLDQIAGMAPQASPLQLIRHLIGQVSAVLPPDGSSLLTVDVDQVNLGGTPLSGVRLALARAGGLTSIGELRATLPGNSRAELRGTLGAVQGGGSTGQDTFDGEIVLRGGSYQRFGAWAGAGGLIGQEEAKQSGRADAPFSLTSKLRLQPERVMLSNTSLELAGRHAAASLDWNWGQQRRLDVVAEGNAIDVRSFAPGLLNLTSEP----GTPAADKARQTGFPLLARLADRIEAVNRAVGDMKLQLRTGELTDGATTLRDVEADVTVGAGRLTIATLRVGSPANGHIELQGEIKSLDSKLASKPQASLRGWLSADNAAAVADLAGLLPSSGRSASR-NWLQNANHLDTSFTLELGARPDDRLTLAAVGAIDGIEHDVELKLDGGLTGWRQAPITLRMTLDGPASSSTIRGMMLPGSAQAVPATLAKPEAARPARLQIDAAGATAESIVASARLELASTATVTYQGRSSISEDGGVDLSGTLNLAAPNTAAFVAFVTGGPVPQIPAAVTAGTVSVERKWGTTSLASRNLEIGASRVAGQATI-ARSGERTRIDANLTASLLDLPSLM 2133
            L+G ++FRG ++W+ S R +R+ T++ + +G++R+KA+V      N YVLD  LS+L      TG LTAKL +                              P    G  AG  G                           A   EL A V G   GV +D++A S E    PQL++G +  +W    R++  LASRWLDLD +A  +  A PL  +R     V+A LP +  +   ++ DQ+ L G P+S VRLA +R+GG   +  +RA LPG  R EL G L              DG + + G S  RF AW      +G +  K+  R D PFSL     L    + L+N S           L    G+++RL V   G  IDV  F  GL++L        G  A D++  T  P  A         + A GD+ L L+  EL DG   L+DV+AD+ +  G+L+I  L+  +    ++E +GE     S + + P+ ++RG +SA +A A   L  L  + G +  + N L        + TL+L   P +   LA  G + G      L L GG   WR +P+ L   +D P  +  +  +     A+A        E  +  R+ + AAG  A  +++ A       A ++Y+G  S+ E G   L G + +A P+    +A    G           GT+SV RK    ++    L +GAS V+GQ  + +R   R  IDA LTA    L + +
Sbjct:  179 LDGPFKFRGTVNWNESPRNVRVATAKLDDNGQLRFKAAVDVIGGANSYVLDARLSDLKTTPTLTGDLTAKLHVGKDAKPADGAPDVTLEAEPERKADAAPGADPTEMTGLEAGQAGETAAAAPASVPTXXXXXXPADTAQANTAKAFELKAKVTGTALGVALDDVAVSLEAGSTPQLITGQAKFDWTDRTRLDVNLASRWLDLDGLAKTSEAAMPLDAVRSYFEMVAAALPAEADTNALLEFDQLTLAGEPISNVRLAASRSGGPLELKGVRADLPGGVRLELDGVLTP-----RARAPDLDGTLFVSGKSLMRFLAWG-----LGNQNLKRE-RTDGPFSLDGHFALGDGTLALTNASAVFQDTPLEGDLKLALGERKRLAVAISGPRIDVAQFKGGLVDLNHLRHILFGADAGDES--TDAPAGAPF-------DPAGGDLALDLKVAELVDGERRLKDVDADIRLERGKLSIPRLKFATAEGLYVEAEGEA----SDVPANPKGAVRGLISAPDAEAAHALLALFDADGEARDKLNRLAGLAPFRLAGTLKLAGGPANASALAIDGKLGGGRLSATLNLGGGRAKWRTSPLDLEAAIDSPDVARLVATLFDARIARAAG------EPPKSGRVIVKAAGVPANGLLSFAEATGEGLA-ISYRGDVSLPEGGATGLDGEVKIAVPDARTALAIAGLGVADGAGGIPLKGTLSVRRKADVLTIDGEALALGASTVSGQVAVTSRDDGRKTIDAKLTADKATLSAAL 914          
BLAST of mRNA_P-wetherbeei_contig10947.1.1 vs. uniprot
Match: UPI0003753CC9 (AsmA family protein n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI0003753CC9)

HSP 1 Score: 256 bits (653), Expect = 1.030e-68
Identity = 216/752 (28.72%), Postives = 346/752 (46.01%), Query Frame = 1
Query:    1 LNGHYRFRGNIDWHGSQREIRLGTSQREPDGKVRYKASVRAPQNGNLYVLDGVLSELSPAGRHTGTLTAKLPLAN------------IIPASAQGRRA-----------------GAGGGRNADMIELTAAVEGDIDGVRVDNMAFSFEHDGKPQLLSGASSANWRHGLRMETRLASRWLDLDQIAGMAPQASPLQLIRHLIGQVSAVLPPDGSSLLTVDVDQVNLGGTPLSGVRLALARAGGLTSIGELRATLPGNSRAELRGTLGAVQGGGSTGQ-DTFDGEIVLRGGSYQRFGAWAGAGGLIGQEEAKQSGRADAPFSLTSKLRLQPERVMLSNTSLELAGRHAAASLDWNWGQQRRLDVVAEGNAIDVRSFAPGLLNLTSEPG------TPAADKARQTGFPLLARLADRIEAVNRAVGDMKLQLRTGELTDGATTLRDVEADVTVGAGRLTIATLRVGSPANGHIELQGEIKSLDSKLASKPQASLRGWLSADNAAAVADLAGLLPSSGRSASR-NWLQNANHLDTSFTLELGARPDDRLTLAAVGAIDGIEHDVELKLDGGLTGWRQAPITLRMTLDGPASSSTIRGMMLPGSAQAVPATLAKPEAARPARLQIDAAGATAESIVASARLELASTATVTYQGRSSISEDGGVDLSGTLNLAAPNTAAFVAFVTGGPVPQIPAAVTAGTVSVERKWGTTSLASRNLEIGASRVAGQATIARSGERTRIDANLTASLLDLPSLMGLVL 2145
            L G +RF+G ++W G+ R +R+ T++ + +G +R+KA+V    + N YVLD  LS++       G LTAKL L +            + P +A    A                  A     A   EL + ++G   G  + ++A S E    PQL++G +   W   LR++ +LASRWLDLDQ++  A    PL+  R     +++VLP +  +   +D DQ+ LGG P+S V LA +RAGG   +  +RA LPG  R EL G L        TG+    DG + + G S  RF AW      + ++      R D  FS+  K  L  E + L++T++E AG      +  + GQ+++L +  EG  +DV  F  GL+ L +  G       PAA        P +     +    + A  D+ L L+  +L DG   L+DV+A V +  G L+I  LR  +P   +IE +GE K + ++    PQ ++RG +SA NAAA      LL     S    +          +  LEL     +  TL   G + G      L+   G+  WR AP+ ++ + + P  ++ +  +        + +T A+P   R  R+ I A G  A+ +++ A +  A   ++ Y+G+  +   G   L+G LN++A +    +A                GTV V R+    +L    + +G S V+G   +     +  IDA L A+     +L+  VL
Sbjct:  179 LEGPFRFKGEVNWDGAPRNLRVSTAKIDNNGDLRFKAAVDVVGSANSYVLDARLSDIKNTPTLDGELTAKLALGSGAQAASTKGAPSLEPVAAPAAEAPHXXXXXXXXXXXXXXXXAASPGGASGFELKSKIKGTTLGFELSDIAVSLEAGATPQLITGDAKVGWADKLRLDVQLASRWLDLDQLSHAADPRMPLEAGRSYFEALASVLPVEADTNAQLDFDQLTLGGEPISNVHLAASRAGGPLELKGVRADLPGGVRLELDGILTP------TGKVPRLDGALFVSGKSLTRFLAWGFGATNVARD------RNDGSFSIDGKFALGDETLALTDTAVEFAGTPLTGEVKLDLGQRKKLAMTIEGPRVDVAQFGSGLVGLNALRGLLFGGDAPAAPADAAAAEPQV-----KSTLFDPATADLSLDLKVAKLLDGPRVLKDVDAVVRLERGTLSIPRLRFSTPEGLYIEAEGEAKDVPAR----PQGAIRGLISAPNAAAGRAFLTLLDVEDASLPTFDRFARLAPFRLAGALELSGGAANASTLDLDGTLGGGRVSASLRXXXGIGQWRTAPLDVQASAENPDVAALVATLF----DTQIKSTAAEPP--RSGRVVIKATGVPAQGLLSLADVT-AEGLSLGYRGQVKLPAPGDTQLAGDLNVSAADARVALALAGVSAAEGAAGVPIGGTVHVRREGPLLTLGGEAITLGDSTVSGDVALKSESGKQTIDAKLVANKASFAALLSPVL 902          
BLAST of mRNA_P-wetherbeei_contig10947.1.1 vs. uniprot
Match: UPI0009303E44 (AsmA family protein n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI0009303E44)

HSP 1 Score: 241 bits (614), Expect = 1.270e-63
Identity = 206/722 (28.53%), Postives = 339/722 (46.95%), Query Frame = 1
Query:    1 LNGHYRFRGNIDWHGSQREIRLGTSQREPDGKVRYKASVRAPQNG-NLYVLDGVLSELSPAGRHTGTLTAKLPLANIIPASAQGRRAGAGGGRNADMIELTAAVEGDIDGVRVDNMAFSFEHDGKPQLLSGASSANWRHGLRMETRLASRWLDLDQIAGMAPQASPLQLIRHLIGQVSAVLPPDGSSLLTVDVDQVNLGGTPLSGVRLALARAGGLTSIGELRATLPGNSRAELRGTLGAVQGGGSTGQDTFDGEIVLRGGSYQRFGAWAGAGGLIGQEEAKQSGRADAPFSLTSKLRLQPERVMLSNTSLELAGRHAAASLDWNWGQQRRLDVVAEGNAIDVRSFAP-GLLNLTSEPGTPAADKARQTGFPLLARLADRIEAVNRAVGDMKLQLRTGELTDGATTLRDVEADVTVGAGRLTIATLRVGSPANGHIELQGEIKSLDSKLASKPQASLRGWLSADNAAAVADLAGLLPSSGRSASR-NWLQNANHLDTSFTLELGARPDDRLTLAAVGAID-GIEHDVELKLDGGLTGWRQAPITLRMTLDGPASSSTIRGMMLPGSAQAVPATLAKPEAARPARLQIDAAGATAESIVASARLELASTATVTYQGRSSISEDGGVDLSGTLNLAAPNTAAFVAFVTG-GPVPQIPAAVTAGTVSVERKWGTTSLASRNLEIGASRVAGQATIARSGERTRIDAN-LTASLLDLPSLMGLVLD 2148
            + G + F+G   W    R++R+ T   + DG +R+KA+VR    G NLY +DG L +     R  G +TAKL L     A+     A  G    A +++  A ++G+ +G+RVD++A SFEH G+PQL++G+++A W   L+++  L+SRWLDLD++A  +   +P +  R+ I  +   LP +  S +  D+DQ  LGG  +S ++L + R GG+  +  LRA +PG +R  L G   AV   G+ GQ  F G++ L G S  RF  WA     +  +   +  R + PFSL     +    + L++   E+ GR    ++ ++  ++ R ++  EG  +D     P G+  L        AD A +   P  A L       + A  D++L+LR G L  G   LRDV+ D+ +  GRL +      S  + ++E+ G +    ++    P+ SL   ++A +  A A L  L     ++  + + L     L  + ++ELG R      ++  G++  G    +   LDGGL GWR AP  +  T++     +    M         P+ +          +   A G     + A+A ++ A    + Y GR ++  DG   L G L +AA N  A V  V G G    +      G++ V     T  L    L +G S+V+G   ++   E + I    +      +P L+  VLD
Sbjct:  179 IEGPFSFKGVAVWDDGARDVRIATGAADADGSIRFKATVRGTGAGANLYAIDGRLQDAKGKPRVDGEITAKLTLP-ADEAALTSAPAVPGAKAEAPLVDFKARIDGNSEGLRVDDIALSFEHIGQPQLIAGSATATWTDALKIDMGLSSRWLDLDRVAKPSAAGAPFETARNFILAMMEALPKNADSRVAFDLDQATLGGEAVSDIKLEVMRNGGVLGVSNLRAGMPGGARIALDG---AVDAAGAKGQ-AFRGDLTLYGTSLARFLNWA-----VKDKAVAEVVRNEGPFSLQGDFAMSENAIDLTDAGAEIGGRAMTGAVHYSKKERPRFELALEGVEMDAEELWPAGIAGLKRVLAGGEADAAPEK--PKFAWL-------DPAATDVQLRLRAGSLLAGKDRLRDVDMDIGINGGRLDVRRAAFASDNDLNVEIDGSV----AETMKDPRGSLHWTIAAPSKEAFATLVALFDLDDQTRRQADALSALTPLRLAGSVELGRRLPQSADVSIDGSVQSGGRLVMSALLDGGLDGWRAAPADITATVNSADVGAAWEAM------SGRPSIVRSKVTPIAGEMFFKAVGTGLSGMTATASVK-APNLFLGYDGRVTLPADGQRGLDGELRVAA-NGLADVMEVAGLGGGTSLEQIAVNGSMRVVSSDHTFELHPERLTLGGSKVSGAVALSYPSEGSAIVTGAIDVDQATIPGLLAFVLD 869          
BLAST of mRNA_P-wetherbeei_contig10947.1.1 vs. uniprot
Match: A0A537RQ00_9PROT (AsmA family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RQ00_9PROT)

HSP 1 Score: 231 bits (589), Expect = 4.840e-61
Identity = 196/627 (31.26%), Postives = 295/627 (47.05%), Query Frame = 1
Query:  292 ELTAAVEGDIDGVRVDNMAFSFEHDGKPQLLSGASSANWRHGLRMETRLASRWLDLDQIAGMAPQASPLQLIRHLIGQVSAVLPPDGSSLLTVDVDQVNLGGTPLSGVRLALARAGGLTSIGELRATLPGNSRAELRGTLGAVQGGGSTGQDTFDGEIVLRGGSYQRFGAWAGAGGLIGQEEAKQSGRADAPFSLTSKLRLQPERVMLSNTSLELAGRHAAASLDWNWGQQRRLDVVAEGNAIDVRSFAPGLLNLTSE-----PGTPAADKARQTGFPLLAR-LADRIEAVNRAVGDMKLQLRTGELTDGATTLRDVEADVTVGAGRLTIATLRVGSPANGHIELQGEIKSLDSKLASKPQASLRGWLSADNAAAVADLAGLL--PSSGRSASRNWLQNANHLDTSFTLELGARPDDRLTLAAVGAIDGIEHDVELKLDGGLTGWRQAPITLRMTLDGPASSSTIRGMMLPGSAQAVPATLAKPEAARPARLQIDAAGATAESIVASARLELASTATVTYQGRSSISEDGGVDLSGTLNLAAPNTAAFVAFVTGGPVPQIPAAVTAGTVSVERKWGTTSLASRNLEIGASRVAGQATIARSGERTRIDANLTASLLDLPSLMGLVLD 2148
            +L AAV  D  G  + ++A +FE DG+PQL+SG   A WR  L +E  LASRWLDLD+IAG +  A PL  +  L   +  +LP D  S  T  VDQ N+G   +SG+RL+LAR+     I ELR  LPG SR EL+G +      G      FDG I LRG S  RF  WA AG L          + D  F + S+L + P R    N   +L+G   +A + + W  +  + +  EG  +D R+  P   +L         G        Q+G    AR L         A  D  +++  G+L   A T RDV  ++ +  G L +  LR+       +EL+G+++      AS+P+ SLR    AD  AA+A LA LL  P + R  +R   +    L  + +L LGAR      L   G  +G    +  + DG   GWR  P  +   ++G   +  I  ++ P  +        +       R+ + A G  +E + + A  E    A + ++GR  ++ + G   +G L++ A + A   A     P  ++     AG+V +     T +L    L+IG S V GQ ++A +GER R++A L    L +  L+G++ D
Sbjct:   10 DLRAAVRADPAGATLTDLALAFEQDGRPQLISGELQAKWRDVLSVEMSLASRWLDLDRIAGASEGAGPLDSVIPLAMGLRDLLPADSRSRATFSVDQANVGREAVSGLRLSLARSKDRLEIEELRLGLPGGSRGELQGIVT-----GPPEAPVFDGSIGLRGTSLVRFLGWATAGALTFDP------KGDGTFGVRSQLMIAPGRAAARNIIGDLSGTAISADVQYRWEGRPEVSLSLEGPQLDARALVPAGASLADVFDVVLHGPLTGLGGGQSGGQGAARGLGAAKPGWRGAQTDASIRISLGQLMTAARTYRDVAMEIELKGGHLRLPLLRIAGDDGFSLELEGDVEDA----ASRPKGSLRAVAGADTGAAIAPLAELLGIPEAFRPDARR-ARAMVPLRLAGSLALGARTPTSADLVLNGEANGAGVKLNARFDGAPAGWRMGPADVTGLVEG-NDAQVIAALLAPSGSPG------RXXXXGSGRVLVKAVGVPSEGLASLASAETGDLA-LDFRGRL-VARESGNSAAGDLDIRAMDGARLAALTGLAPPLRLDGLPIAGSVKLSVDSSTLALDRLALKIGGSDVKGQLSLASAGERRRVEARLDVEELSVAKLLGVLQD 611          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10947.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A7C4TY04_9HYPH2.070e-10734.84AsmA family protein n=1 Tax=Hyphomicrobiales bacte... [more]
A0A2W4RJB4_9PROT6.740e-8330.86Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
A0A7C2M0V9_9HYPH1.960e-7731.66AsmA family protein n=1 Tax=Hyphomicrobiales bacte... [more]
A0A109BJK7_HYPSL4.230e-7432.01AsmA domain-containing protein n=2 Tax=Hyphomicrob... [more]
A0A6I3KH06_9HYPH9.430e-7430.03AsmA family protein n=1 Tax=Hyphomicrobium album T... [more]
A0A2W4KS24_9PROT2.820e-7230.70Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
UPI00093008E71.870e-7129.73AsmA family protein n=1 Tax=Hyphomicrobium sp. CS1... [more]
UPI0003753CC91.030e-6828.72AsmA family protein n=1 Tax=Hyphomicrobium zavarzi... [more]
UPI0009303E441.270e-6328.53AsmA family protein n=1 Tax=Hyphomicrobium sp. NDB... [more]
A0A537RQ00_9PROT4.840e-6131.26AsmA family protein n=1 Tax=Alphaproteobacteria ba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10947contigP-wetherbeei_contig10947:1..2229 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1267005.KB911256_gene1900
Preferred nameasmA
PFAMsAsmA,AsmA_2
Model size2154
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K07289
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.69e-69
EggNOG OGsCOG2982@1|root,COG2982@2|Bacteria,1MUNH@1224|Proteobacteria,2TT0W@28211|Alphaproteobacteria,3N7AH@45401|Hyphomicrobiaceae
DescriptionAsmA family
Cds size2154
COG categoryM
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185891.2103543-CDS-P-wetherbeei_contig10947:0..4831683185891.2103543-CDS-P-wetherbeei_contig10947:0..483Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10947 1..483 +
1683185891.218899-CDS-P-wetherbeei_contig10947:558..22291683185891.218899-CDS-P-wetherbeei_contig10947:558..2229Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10947 559..2229 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10947.1.1prot_P-wetherbeei_contig10947.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10947 1..2229 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10947.1.1

>prot_P-wetherbeei_contig10947.1.1 ID=prot_P-wetherbeei_contig10947.1.1|Name=mRNA_P-wetherbeei_contig10947.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=718bp
LNGHYRFRGNIDWHGSQREIRLGTSQREPDGKVRYKASVRAPQNGNLYVL
DGVLSELSPAGRHTGTLTAKLPLANIIPASAQGRRAGAGGGRNADMIELT
AAVEGDIDGVRVDNMAFSFEHDGKPQLLSGASSANWRHGLRMETRLASRW
LDLDQIAGMAPQASPLQLIRHLIGQVSAVLPPDGSSLLTVDVDQVNLGGT
PLSGVRLALARAGGLTSIGELRATLPGNSRAELRGTLGAVQGGGSTGQDT
FDGEIVLRGGSYQRFGAWAGAGGLIGQEEAKQSGRADAPFSLTSKLRLQP
ERVMLSNTSLELAGRHAAASLDWNWGQQRRLDVVAEGNAIDVRSFAPGLL
NLTSEPGTPAADKARQTGFPLLARLADRIEAVNRAVGDMKLQLRTGELTD
GATTLRDVEADVTVGAGRLTIATLRVGSPANGHIELQGEIKSLDSKLASK
PQASLRGWLSADNAAAVADLAGLLPSSGRSASRNWLQNANHLDTSFTLEL
GARPDDRLTLAAVGAIDGIEHDVELKLDGGLTGWRQAPITLRMTLDGPAS
SSTIRGMMLPGSAQAVPATLAKPEAARPARLQIDAAGATAESIVASARLE
LASTATVTYQGRSSISEDGGVDLSGTLNLAAPNTAAFVAFVTGGPVPQIP
AAVTAGTVSVERKWGTTSLASRNLEIGASRVAGQATIARSGERTRIDANL
TASLLDLPSLMGLVLDGA
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mRNA from alignment at P-wetherbeei_contig10947:1..2229+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10947.1.1 ID=mRNA_P-wetherbeei_contig10947.1.1|Name=mRNA_P-wetherbeei_contig10947.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2229bp|location=Sequence derived from alignment at P-wetherbeei_contig10947:1..2229+ (Phaeothamnion wetherbeei SAG_119_79)
CTCAACGGCCACTATCGCTTTCGCGGCAACATCGATTGGCACGGGTCCCA GCGCGAGATCCGCCTGGGCACCTCGCAACGCGAGCCCGACGGCAAGGTTC GCTACAAGGCGAGTGTGAGGGCGCCCCAGAACGGCAACCTGTATGTCCTC GACGGCGTGCTGTCCGAACTGTCGCCGGCCGGCCGCCACACCGGCACGCT GACCGCCAAGTTGCCGCTCGCCAACATCATTCCTGCGAGCGCCCAGGGCC GGCGCGCGGGTGCGGGCGGCGGACGCAATGCCGATATGATCGAACTCACC GCTGCCGTCGAGGGCGACATCGACGGTGTCCGCGTCGACAACATGGCGTT CTCCTTCGAGCACGACGGCAAGCCGCAACTGTTGAGCGGCGCCTCCTCGG CGAACTGGCGCCATGGCTTGCGGATGGAGACGCGCCTCGCCTCGCGCTGG CTCGATCTCGACCAGATCGCCGGCATGGCACCCGTCAAGCCGGAGGGCAA CCCGGATGCACAGTCCGGCAAGCAGCAACCCGGCCCGTCCGAAGGCGCAT CGGCCCAGCAGGCATCGCCGCTGCAGCTCATCCGGCACCTGATCGGTCAG GTCAGCGCCGTGCTGCCACCCGACGGTTCGTCCCTGCTGACCGTCGATGT CGATCAGGTCAACCTCGGCGGCACGCCGCTCAGTGGCGTCAGGCTGGCCT TGGCGCGTGCTGGCGGCCTCACCAGCATCGGTGAGCTCAGGGCGACGCTG CCGGGCAATTCCCGCGCCGAATTGCGCGGGACACTCGGTGCGGTCCAGGG CGGCGGCTCGACCGGCCAGGATACGTTCGACGGCGAAATCGTCCTGCGCG GCGGCAGCTATCAGCGCTTCGGGGCCTGGGCCGGCGCCGGCGGGCTGATC GGCCAGGAGGAAGCCAAGCAGTCCGGCCGCGCGGATGCGCCGTTCTCGCT CACCTCGAAACTCCGCCTGCAGCCCGAGCGGGTGATGCTGTCGAACACCT CGCTCGAGCTGGCCGGGCGCCACGCGGCGGCGTCGCTCGATTGGAACTGG GGCCAGCAGCGCCGGCTCGATGTCGTCGCCGAGGGCAACGCGATCGACGT CAGGTCGTTTGCTCCCGGCCTGTTGAATTTGACGTCGGAGCCCGGCACGC CGGCCGCCGACAAGGCCCGCCAGACCGGCTTTCCCTTGCTGGCGCGCCTG GCCGACCGGATCGAAGCGGTCAATCGTGCGGTCGGCGATATGAAACTCCA GCTTCGCACCGGCGAACTGACCGACGGCGCCACGACCCTCCGCGATGTCG AGGCGGACGTGACCGTCGGGGCTGGCCGGTTGACGATTGCCACGCTCAGG GTTGGCAGTCCCGCGAACGGCCACATCGAACTGCAGGGCGAGATCAAGAG CCTCGATTCGAAGCTTGCCTCCAAGCCCCAGGCCAGCCTGCGCGGCTGGC TGTCGGCCGACAACGCCGCCGCCGTCGCGGACCTTGCCGGTCTTCTGCCA TCGAGCGGGCGCAGTGCGTCGAGGAACTGGCTGCAGAACGCCAACCACCT CGACACGTCCTTCACCCTGGAACTCGGCGCCAGGCCGGACGACCGCTTGA CGCTGGCAGCCGTCGGCGCCATCGACGGGATCGAGCACGACGTCGAGCTG AAACTCGACGGTGGCCTCACCGGCTGGCGGCAAGCGCCCATCACTCTGAG GATGACGCTCGACGGCCCCGCCTCCAGCAGCACGATCCGCGGGATGATGC TGCCCGGCAGCGCACAGGCGGTCCCCGCAACGCTGGCCAAACCCGAAGCT GCCCGCCCCGCCCGGCTGCAGATCGACGCCGCGGGCGCGACGGCTGAATC GATCGTCGCATCCGCCCGCCTCGAATTGGCGAGCACGGCGACCGTAACCT ATCAGGGCCGCTCGTCGATCAGCGAAGACGGCGGCGTCGATCTTTCGGGC ACCCTGAACCTCGCTGCGCCCAACACCGCAGCGTTCGTCGCTTTCGTCAC CGGCGGCCCCGTGCCCCAGATCCCGGCGGCGGTCACTGCGGGAACCGTTT CGGTCGAGCGCAAGTGGGGGACGACATCCCTGGCGTCGCGCAATCTGGAG ATCGGTGCAAGCCGCGTTGCGGGACAGGCGACGATCGCGAGGTCGGGCGA ACGGACCCGCATCGACGCCAACCTGACGGCTTCGCTACTCGACCTGCCAT CGCTGATGGGCCTTGTCCTGGATGGAGCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10947:1..2229+

>mRNA_P-wetherbeei_contig10947.1.1 ID=mRNA_P-wetherbeei_contig10947.1.1|Name=mRNA_P-wetherbeei_contig10947.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2154bp|location=Sequence derived from alignment at P-wetherbeei_contig10947:1..2229+ (Phaeothamnion wetherbeei SAG_119_79)
CTCAACGGCCACTATCGCTTTCGCGGCAACATCGATTGGCACGGGTCCCA
GCGCGAGATCCGCCTGGGCACCTCGCAACGCGAGCCCGACGGCAAGGTTC
GCTACAAGGCGAGTGTGAGGGCGCCCCAGAACGGCAACCTGTATGTCCTC
GACGGCGTGCTGTCCGAACTGTCGCCGGCCGGCCGCCACACCGGCACGCT
GACCGCCAAGTTGCCGCTCGCCAACATCATTCCTGCGAGCGCCCAGGGCC
GGCGCGCGGGTGCGGGCGGCGGACGCAATGCCGATATGATCGAACTCACC
GCTGCCGTCGAGGGCGACATCGACGGTGTCCGCGTCGACAACATGGCGTT
CTCCTTCGAGCACGACGGCAAGCCGCAACTGTTGAGCGGCGCCTCCTCGG
CGAACTGGCGCCATGGCTTGCGGATGGAGACGCGCCTCGCCTCGCGCTGG
CTCGATCTCGACCAGATCGCCGGCATGGCACCCCAGGCATCGCCGCTGCA
GCTCATCCGGCACCTGATCGGTCAGGTCAGCGCCGTGCTGCCACCCGACG
GTTCGTCCCTGCTGACCGTCGATGTCGATCAGGTCAACCTCGGCGGCACG
CCGCTCAGTGGCGTCAGGCTGGCCTTGGCGCGTGCTGGCGGCCTCACCAG
CATCGGTGAGCTCAGGGCGACGCTGCCGGGCAATTCCCGCGCCGAATTGC
GCGGGACACTCGGTGCGGTCCAGGGCGGCGGCTCGACCGGCCAGGATACG
TTCGACGGCGAAATCGTCCTGCGCGGCGGCAGCTATCAGCGCTTCGGGGC
CTGGGCCGGCGCCGGCGGGCTGATCGGCCAGGAGGAAGCCAAGCAGTCCG
GCCGCGCGGATGCGCCGTTCTCGCTCACCTCGAAACTCCGCCTGCAGCCC
GAGCGGGTGATGCTGTCGAACACCTCGCTCGAGCTGGCCGGGCGCCACGC
GGCGGCGTCGCTCGATTGGAACTGGGGCCAGCAGCGCCGGCTCGATGTCG
TCGCCGAGGGCAACGCGATCGACGTCAGGTCGTTTGCTCCCGGCCTGTTG
AATTTGACGTCGGAGCCCGGCACGCCGGCCGCCGACAAGGCCCGCCAGAC
CGGCTTTCCCTTGCTGGCGCGCCTGGCCGACCGGATCGAAGCGGTCAATC
GTGCGGTCGGCGATATGAAACTCCAGCTTCGCACCGGCGAACTGACCGAC
GGCGCCACGACCCTCCGCGATGTCGAGGCGGACGTGACCGTCGGGGCTGG
CCGGTTGACGATTGCCACGCTCAGGGTTGGCAGTCCCGCGAACGGCCACA
TCGAACTGCAGGGCGAGATCAAGAGCCTCGATTCGAAGCTTGCCTCCAAG
CCCCAGGCCAGCCTGCGCGGCTGGCTGTCGGCCGACAACGCCGCCGCCGT
CGCGGACCTTGCCGGTCTTCTGCCATCGAGCGGGCGCAGTGCGTCGAGGA
ACTGGCTGCAGAACGCCAACCACCTCGACACGTCCTTCACCCTGGAACTC
GGCGCCAGGCCGGACGACCGCTTGACGCTGGCAGCCGTCGGCGCCATCGA
CGGGATCGAGCACGACGTCGAGCTGAAACTCGACGGTGGCCTCACCGGCT
GGCGGCAAGCGCCCATCACTCTGAGGATGACGCTCGACGGCCCCGCCTCC
AGCAGCACGATCCGCGGGATGATGCTGCCCGGCAGCGCACAGGCGGTCCC
CGCAACGCTGGCCAAACCCGAAGCTGCCCGCCCCGCCCGGCTGCAGATCG
ACGCCGCGGGCGCGACGGCTGAATCGATCGTCGCATCCGCCCGCCTCGAA
TTGGCGAGCACGGCGACCGTAACCTATCAGGGCCGCTCGTCGATCAGCGA
AGACGGCGGCGTCGATCTTTCGGGCACCCTGAACCTCGCTGCGCCCAACA
CCGCAGCGTTCGTCGCTTTCGTCACCGGCGGCCCCGTGCCCCAGATCCCG
GCGGCGGTCACTGCGGGAACCGTTTCGGTCGAGCGCAAGTGGGGGACGAC
ATCCCTGGCGTCGCGCAATCTGGAGATCGGTGCAAGCCGCGTTGCGGGAC
AGGCGACGATCGCGAGGTCGGGCGAACGGACCCGCATCGACGCCAACCTG
ACGGCTTCGCTACTCGACCTGCCATCGCTGATGGGCCTTGTCCTGGATGG
AGCA
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