mRNA_P-wetherbeei_contig10932.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10932.2.1 vs. uniprot
Match: A0A836CJW0_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJW0_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.190e-48 Identity = 97/169 (57.40%), Postives = 113/169 (66.86%), Query Frame = 1 Query: 7 ISPLPTQPFRGLVSYAGPVCFLYERCEPSYTVLRRMYARLWCRLNTVRSASGCLPQLLRLVEDLLQAHAPALSTRLRIIGAA-PARLAAPWLQLGFVGLLEADQVLALWDRLLAWGGRLELLAALAAAVLVFKGEALAAAADAAEVRDLLADGSRLRVVPLLQAFLFPD 510 + P QPFRGLVSYA P+CFL+ P Y R MY R WCRLN +RSA G L LLRL EDLL+ H P L +L +G P RLA PW+Q GFVG LE +VL LWDR+LA+ L LL ALAAAV VF+ A+ AA DA VRD ADG+ L+ +PLLQAFLFP Sbjct: 443 VPPCGVQPFRGLVSYAAPLCFLWAERAPVYAAFRAMYVRYWCRLNAIRSAPGGLLHLLRLFEDLLRCHHPQLMLKLAELGIQQPLRLAMPWIQFGFVGYLEVGEVLQLWDRVLAYDS-LSLLPALAAAVFVFRSAAVLAAPDADAVRDAFADGTCLKAIPLLQAFLFPQ 610
BLAST of mRNA_P-wetherbeei_contig10932.2.1 vs. uniprot
Match: F0YBG1_AURAN (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBG1_AURAN) HSP 1 Score: 152 bits (385), Expect = 5.330e-42 Identity = 84/168 (50.00%), Postives = 109/168 (64.88%), Query Frame = 1 Query: 1 SLISPLPTQPFRGLVSYAGPVCFLYERCEPSYTVLRRMYARLWCRLNTVRSASGCLPQLLRLVEDLLQAHAPALSTRLRIIGAAPARLAAPWLQLGFVGLLEADQVLALWDRLLAWGGRLELLAALAAAVLVFKGEALAAAADAAEVRDLLADGSRLRVVPLLQAFLF 504 S + P QPFRG VSY P+ F+YER EP Y LR MYA+ WC+LN +R+A L L +L E L+ + P L L IG P +A PW+Q GFVGLL+ DQVL LWDR+L + L LL LAAA+ V++ E L +A +V+D+ +DGS L+VVPL+Q FLF Sbjct: 183 SAVPPCAVQPFRGFVSYTAPLTFVYEREEPIYYCLRAMYAKFWCKLNVMRTAECTLLPLCKLFEQLVIENHPKLFFYLVQIGVDPLAVALPWIQFGFVGLLDVDQVLLLWDRILGFED-LSLLPILAAAIFVYRSEKLLSATSLDDVKDMFSDGSILQVVPLIQTFLF 349
BLAST of mRNA_P-wetherbeei_contig10932.2.1 vs. uniprot
Match: A0A0G4ISX4_PLABS (Rab-GAP TBC domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4ISX4_PLABS) HSP 1 Score: 140 bits (352), Expect = 9.050e-36 Identity = 76/169 (44.97%), Postives = 105/169 (62.13%), Query Frame = 1 Query: 7 ISPLPTQPFRGLVSYAGPVCFLYERCEPSYTVLRRMYARLWCRLNTVRSASGCLPQLLRLVEDLLQAHAPALSTRLRIIGAAPARLAAPWLQLGFVGLLEADQVLALWDRLLAWGGRLELLAALAAAVLVFKGEALAAAADAAEVRDLLADGSRLRVVPLLQAFLFPDS 513 I P PF V A P+C+L++RCE +Y V R MYAR +CRL+T+ S G + L +L EDL+Q+ +P + +G P R+ PWL F G L DQVL LWDR+LA+ LELLA LA+A+ +F+ +++ A + E+RD+ DG RV+PLLQ FLF S Sbjct: 387 IPPCGVVPFHHQVMLAAPLCYLFQRCEHTYFVFRHMYARYFCRLHTISSRPGTILHLCKLFEDLVQSRSPQVFYHAVEVGMPPLRVVFPWLFTAFSGYLAVDQVLTLWDRILAYDS-LELLAILASAIFLFRSKSVLNATSSDEIRDIFEDGIYFRVMPLLQHFLFDSS 554
BLAST of mRNA_P-wetherbeei_contig10932.2.1 vs. uniprot
Match: A0A7S3YGJ5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGJ5_HETAK) HSP 1 Score: 133 bits (335), Expect = 2.540e-35 Identity = 71/162 (43.83%), Postives = 96/162 (59.26%), Query Frame = 1 Query: 7 ISPLPTQPFRGLVSYAGPVCFLYERCEPSYTVLRRMYARLWCRLNTVRSASGCLPQLLRLVEDLLQAHAPALSTRLRIIGAAPARLAAPWLQLGFVGLLEADQVLALWDRLLAWGGRLELLAALAAAVLVFKGEALAAAADAAEVRDLLADGSRLRVVPLLQ 492 + P QPFRG +Y P+CFLY Y V R ++ R WCRLN VR G L L +L EDL+ AP RL +G +P + PW+Q GFVG LE DQ+L LWDR++ + L LL LAA++++F+ + A +RDL D +RL+VVPLL+ Sbjct: 114 VPPCGVQPFRGFCNYLAPLCFLYHDAPTCYGVARALWCRFWCRLNAVRGRPGTLLPLCKLFEDLVLQGAPDAFARLVALGVSPLSIVMPWIQFGFVGFLEPDQILLLWDRIIGFQS-LHLLPVLAASIIMFRSHNILKVDSADGLRDLFQDITRLKVVPLLR 274
BLAST of mRNA_P-wetherbeei_contig10932.2.1 vs. uniprot
Match: A0A8J2WGK4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WGK4_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.440e-34 Identity = 77/170 (45.29%), Postives = 103/170 (60.59%), Query Frame = 1 Query: 7 ISPLPTQPFRGLVSYAGPVCFLYERCEPSYTVLRRMYARLWCRLNTVRSASGCLPQLLRLVEDLLQAHAPALSTRLRIIGAAPARLAAPWLQLGFVGLLEADQVLALWDRLLAWGGRLELLAALAAAVLVFKGEALAAAADAAEVRDLLADGSRLRVVPLLQAFLFPDSV 516 + P QPFRG VSYA P+ F++ R Y R YA+ +CRLN +R+ L L L E L+ H P L L +G P +A PW+Q GFVGLL+ +QVL LWDRLL + L LL+ LAAA+ V++ E L + E R++ ADG+ L VVPLLQ FL+P+ + Sbjct: 357 VPPCGVQPFRGFVSYAAPLTFVFGRETSLYFAFRAFYAQHFCRLNVLRTNQNTLLPLCALFERLVIEHHPRLFFYLVQVGVDPLAIALPWIQFGFVGLLDVEQVLLLWDRLLGFED-LALLSVLAAAIFVYRSEKLLQCSSLEEAREMFADGAVLEVVPLLQTFLWPEGL 525
BLAST of mRNA_P-wetherbeei_contig10932.2.1 vs. uniprot
Match: A0A0H5RE29_9EUKA (Rab-GAP TBC domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RE29_9EUKA) HSP 1 Score: 132 bits (331), Expect = 8.150e-33 Identity = 73/171 (42.69%), Postives = 105/171 (61.40%), Query Frame = 1 Query: 1 SLISPLPTQPFRGLVSYAGPVCFLYERCEPSYTVLRRMYARLWCRLNTVRSASGCLPQLLRLVEDLLQAHAPALSTRLRIIGAAPARLAAPWLQLGFVGLLEADQVLALWDRLLAWGGRLELLAALAAAVLVFKGEALAAAADAAEVRDLLADGSRLRVVPLLQAFLFPDS 513 ++I P PF V A P+C+L+++ E +Y V R+MYAR +CRL+ + S + L +L EDL+Q+ +P + G P R+ PWL F G L DQVL LWDR+LA+ LELL+ LAAA+ VF+ +++ A+ E+RD+ DG+ RV+PLLQ FLF S Sbjct: 382 TIIPPCQIVPFHLQVMLAAPLCYLFQQAEQTYFVYRQMYARYFCRLHLISSRKDTIIYLCKLFEDLVQSDSPQVFYHAVEAGLPPLRVVFPWLFTAFSGYLAVDQVLILWDRILAYDS-LELLSVLAAAIFVFRSKSVMNASSGDEIRDIFEDGAHFRVLPLLQHFLFDSS 551
BLAST of mRNA_P-wetherbeei_contig10932.2.1 vs. uniprot
Match: UPI0018864B2E (TBC1 domain family member 19 isoform X1 n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI0018864B2E) HSP 1 Score: 126 bits (316), Expect = 8.560e-31 Identity = 76/159 (47.80%), Postives = 94/159 (59.12%), Query Frame = 1 Query: 28 PFRGLVSYAGPVCFLYERCEPSYTVLRRMYARLWCRLNTVRSASGCLPQLLRLVEDLLQAHAPALSTRLRIIGAAPARLAAPWLQLGFVGLLEADQVLALWDRLLAWGGRLELLAALAAAVLVFKGEALAAAADAAEVRDLLADGSRLRVVPLLQAFLF 504 PF G Y P+CFLY+ Y+V R MY R + RL++V SA + L L+E LLQ H P L LR IGA P R+A WL F G L DQ+L LWDR+L + LEL+A LAAAV F+ E L A +LAD S LRV+PL+Q+FLF Sbjct: 368 PFHGFSMYVAPLCFLYKEPSELYSVFREMYTRYFFRLHSVSSARSGIVSLCLLLERLLQTHLPRLFHHLRRIGAQPLRIAFKWLLRAFSGYLCTDQLLFLWDRILGYDS-LELVAVLAAAVFAFRAENLMEVTSLASAEAVLADLSTLRVMPLIQSFLF 525
BLAST of mRNA_P-wetherbeei_contig10932.2.1 vs. uniprot
Match: A0A2D4MQA0_9SAUR (Rab-GAP TBC domain-containing protein (Fragment) n=2 Tax=Bifurcata TaxID=1329961 RepID=A0A2D4MQA0_9SAUR) HSP 1 Score: 120 bits (300), Expect = 1.650e-30 Identity = 71/159 (44.65%), Postives = 92/159 (57.86%), Query Frame = 1 Query: 28 PFRGLVSYAGPVCFLYERCEPSYTVLRRMYARLWCRLNTVRSASGCLPQLLRLVEDLLQAHAPALSTRLRIIGAAPARLAAPWLQLGFVGLLEADQVLALWDRLLAWGGRLELLAALAAAVLVFKGEALAAAADAAEVRDLLADGSRLRVVPLLQAFLF 504 PF G Y P+CFLY Y + R +Y R + RL+++ S S + L L E+LLQ+H P L LR IGA P R++ W+ F G L DQ+L LWDR+L + LE+LA LAAAV VF+ L A +LAD S L+V+PLLQ FLF Sbjct: 74 PFHGFSMYVAPLCFLYNEPSKLYQIFREIYVRYFFRLHSISSHSSGIVSLCLLFENLLQSHLPQLFYHLREIGAQPLRISFKWMVRAFSGYLATDQLLFLWDRILGYN-TLEILAVLAAAVFVFRAGNLMEVTSLAAAEAVLADLSTLKVMPLLQIFLF 231
BLAST of mRNA_P-wetherbeei_contig10932.2.1 vs. uniprot
Match: UPI00199267C4 (TBC1 domain family member 19 isoform X1 n=2 Tax=Silurus meridionalis TaxID=175797 RepID=UPI00199267C4) HSP 1 Score: 124 bits (312), Expect = 3.080e-30 Identity = 72/163 (44.17%), Postives = 94/163 (57.67%), Query Frame = 1 Query: 28 PFRGLVSYAGPVCFLYERCEPSYTVLRRMYARLWCRLNTVRSASGCLPQLLRLVEDLLQAHAPALSTRLRIIGAAPARLAAPWLQLGFVGLLEADQVLALWDRLLAWGGRLELLAALAAAVLVFKGEALAAAADAAEVRDLLADGSRLRVVPLLQAFLFPDSV 516 PF G Y P+CFLY Y+V R MY R + RL+++ S+ + L E LLQ+H P LS L+ IGA P R+A W+ F G L DQ+L LWDR+L +G LE++A LAAAV F+ E L A +LAD S L+V+PLLQ FLF + Sbjct: 364 PFHGFSMYVAPLCFLYNEPSKLYSVFREMYVRYFFRLHSISSSPSGIVSLCLQFERLLQSHLPQLSYHLQEIGAQPLRIAFKWMVRAFSGYLSTDQLLLLWDRILGYGS-LEVVAVLAAAVFTFRAENLMEVTSLASAEAVLADLSTLKVMPLLQIFLFATGI 525
BLAST of mRNA_P-wetherbeei_contig10932.2.1 vs. uniprot
Match: A0A3Q3GUP7_9LABR (TBC1 domain family member 19 n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3GUP7_9LABR) HSP 1 Score: 124 bits (311), Expect = 4.900e-30 Identity = 72/163 (44.17%), Postives = 93/163 (57.06%), Query Frame = 1 Query: 28 PFRGLVSYAGPVCFLYERCEPSYTVLRRMYARLWCRLNTVRSASGCLPQLLRLVEDLLQAHAPALSTRLRIIGAAPARLAAPWLQLGFVGLLEADQVLALWDRLLAWGGRLELLAALAAAVLVFKGEALAAAADAAEVRDLLADGSRLRVVPLLQAFLFPDSV 516 PF G Y P+CFLY Y+V R MY R + RL+++ S+ + L E LLQ H P L LR IGA P R+A W+ GF G L DQ+L LWDR+L + LE++A LAAAV F+ E L A +LAD S L+V+PL+Q FLF S+ Sbjct: 383 PFHGFSMYVAPLCFLYNEPSKLYSVFREMYTRYFFRLHSISSSPSGIVSLCLQFERLLQTHLPQLFYHLRQIGAQPLRIAFKWMVRGFSGYLSTDQLLLLWDRILGYDS-LEVVAVLAAAVFAFRAENLMEVTSLASAEAVLADLSTLKVMPLIQVFLFATSI 544 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10932.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10932.2.1 >prot_P-wetherbeei_contig10932.2.1 ID=prot_P-wetherbeei_contig10932.2.1|Name=mRNA_P-wetherbeei_contig10932.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=175bp SLISPLPTQPFRGLVSYAGPVCFLYERCEPSYTVLRRMYARLWCRLNTVRback to top mRNA from alignment at P-wetherbeei_contig10932:1587..2111- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10932.2.1 ID=mRNA_P-wetherbeei_contig10932.2.1|Name=mRNA_P-wetherbeei_contig10932.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=525bp|location=Sequence derived from alignment at P-wetherbeei_contig10932:1587..2111- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10932:1587..2111- >mRNA_P-wetherbeei_contig10932.2.1 ID=mRNA_P-wetherbeei_contig10932.2.1|Name=mRNA_P-wetherbeei_contig10932.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=525bp|location=Sequence derived from alignment at P-wetherbeei_contig10932:1587..2111- (Phaeothamnion wetherbeei SAG_119_79)back to top |