mRNA_P-wetherbeei_contig1093.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1093.2.1
Unique NamemRNA_P-wetherbeei_contig1093.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1093.2.1 vs. uniprot
Match: A0A835Z8L1_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L1_9STRA)

HSP 1 Score: 296 bits (757), Expect = 2.240e-86
Identity = 194/408 (47.55%), Postives = 229/408 (56.13%), Query Frame = 1
Query:   52 EAIVVCVRIRPDEEPDAACGLDLSG---SCIDIR-GQTKLTIVPPPERYSRPAEQRRVQPPTAHDFRFDRVFAPTDTQEDVFELVRPLVEATVEGFNATVFAYGQTGSGKTHTISGDSANPGILPRAVDLLFSRLNDDSRP---ELASMVFVSFVEIYNNAFHSLLPAAPATAGPGRTRGGCSGGAVNGGSXXXXXXXXRNGENSEPKIELREHPTRGVYLSGGGAGLRVPVTSAEAVCALLRKGSAARATAATKLNERSSRSHAVVTLEIEALETGPVAAARPSSPATGXXXXXXRGVTMGRLTFVDLAGSERVSLSGAEGDTLAEAQSINLSLSLLGDVLSALSKLNRAAALXXXXXXXXXXXXXXXXXXXAVERPFVPYRNSKLTYLLKDSLGGNCKTLMVCTVR 1254
            EAI V VRIRP+     +  +  S    SC+ +     K+TI  P         Q  V     H+F FDRVF     QE+VF LVRPLV A  +G+ ATVFAYG TGSGKTHTISG   + G+LPRAV LL   L  D+     +   MV +SFVEIYNN F SLL A  AT                               +   KIE+RE PTRGVYL+GG   LR+PVT  E    L+ +G   RAT+ T +NERSSRSHA++T E+E             S A+         V +G+L  +DLAGSERV LSGAEG  LAEAQSINLSLSLLGDVLSALSK +RA +                    A ERPF+PYRNSKLT+LLKDSLGGNCKTLMVC +R
Sbjct:    2 EAICVAVRIRPEAALAGSSIITSSDDLVSCVRVADAANKVTIACPARACLGSTSQSVVAESATHEFIFDRVFDAASRQEEVFTLVRPLVNAAADGYVATVFAYGMTGSGKTHTISGTGGDVGMLPRAVSLLLDSLKADAAKGPQQTIFMVTISFVEIYNNTFVSLLSAPSATT------------------------------DGNQKIEIRESPTRGVYLTGG-TNLRLPVTCTEEAMQLIHRGMEKRATSCTNMNERSSRSHAILTFEVE------------RSTAS---------VRVGKLQLIDLAGSERVGLSGAEGSVLAEAQSINLSLSLLGDVLSALSKYHRAVS---------------KGLASATERPFIPYRNSKLTHLLKDSLGGNCKTLMVCCIR 342          
BLAST of mRNA_P-wetherbeei_contig1093.2.1 vs. uniprot
Match: A0A7S4E6T1_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6T1_9STRA)

HSP 1 Score: 283 bits (724), Expect = 1.720e-73
Identity = 200/536 (37.31%), Postives = 281/536 (52.43%), Query Frame = 1
Query:   52 EAIVVCVRIRPDEEPDAACGLDLSGSCIDIRGQTKLTIVPPPERYSRPAEQRRVQPPTAHDFRFDRVFAPTDTQEDVFELVRPLVEATVEGFNATVFAYGQTGSGKTHTISGDSANPGILPRAVDLLFSRLNDDSRPELAS-MVFVSFVEIYNNAFHSLLPAAPATAGPGRTRGGCSGGAVNGGSXXXXXXXXRNGENSEPKIELREHPTRGVYLSGGGAGLRVPVTSAEAVCALLRKGSAARATAATKLNERSSRSHAVVTLEIEALETGPVAAARPSSPATGXXXXXXRGVTMGRLTFVDLAGSERVSLSGAEGDTLAEAQSINLSLSLLGDVLSALSKLNRAAALXXXXXXXXXXXXXXXXXXXAVERPFVPYRNSKLTYLLKDSLGGNCKTLMVCTVRAAPAFFQQTMSSLRYAARARDIRNAPHRVVDRLANGDGNNDRDDAGTTLRATVNEMARLKTALADRTAQFEXXXXXXXXXXXXXXXXXXXXXXLATRNAKEKAEMESLVKSVVHAHSGELERQKAGFGQLQSTL 1656
            E + V  RIRP+      CG      C+ +   T + +  P +     +  +R +P T   F  DRV  P   Q DV+E V+PLV +   G+NATVFAYG TGSGKTHT++GD+  PG+ PRAV  LF+ +   +R + A  +V VS+VE+YNN F +LL                                     +S  KIE+RE    GV+L+G  + L+V VTS + V  L+  G  ARA A T+ N+ SSRSH ++TL +++ +   +A   P + A          V +G+L  VDLAGSERVSLSGA+G+TL EAQ+INLSL+LLGDVL+ALS+                             R  VPYRNSKLTYLLKDSLGGN KTLM+ T+R++  +++Q++ SL YA+RAR I+N+    +DR   G G    +    +L+    ++  L T L  R  +F+                      L   N  E+ E+E+ + +V+H HS EL  +   FG+LQ+ L
Sbjct:   27 EHVRVIARIRPEPSSVRGCG------CLRVTSDTCVELCQP-DGVRAQSHSKRGRPRTRL-FTLDRVLGPQSVQADVYEHVKPLVHSAAHGYNATVFAYGHTGSGKTHTMTGDNVQPGVTPRAVRELFAAIEHATRTKDAVFLVHVSYVELYNNQFRNLLDDV----------------------------GNHCHASSSTKIEIRESRDTGVFLTGP-SNLKVAVTSEQEVQELISLGDKARAYALTRCNDHSSRSHCILTLHVQS-QRASIALQDPQNAAL-------TSVHVGKLNLVDLAGSERVSLSGAQGETLVEAQNINLSLALLGDVLAALSR------------NSLRGEQGTQFPRSGGSREPVPYRNSKLTYLLKDSLGGNSKTLMITTLRSSETYYRQSLVSLMYASRARTIQNSSTVNLDR---GSGPRTTE----SLQVVSEQLNHLHTRLRVREREFDALCATSASSTSENMRLKSELQRLEALNEAERCELENKLNTVIHGHSSELRNRTEQFGRLQARL 498          
BLAST of mRNA_P-wetherbeei_contig1093.2.1 vs. uniprot
Match: D8LT23_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT23_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 5.800e-73
Identity = 228/455 (50.11%), Postives = 282/455 (61.98%), Query Frame = 1
Query:  490 FVEIYNNAFHSLLPA-APATAGPGRTRGGCSGGA---VNGGSXXXXXXXXRNGENS-EPKIELREHPTRGVYLSGGGAGLRVPVTSAEAVCALLRKGSAARATAATKLNERSSRSHAVVTLEIEALET-------------------------------------------GPVAAARPSSPATGXXXXXXRG------VTMGRLTFVDLAGSERVSLSGAEGDTLAEAQSINLSLSLLGDVLSALSKLNRAAA----LXXXXXXXXXXXXXXXXXXXAV-ERPFVPYRNSKLTYLLKDSLGGNCKTLMVCTVRAAPAFFQQTMSSLRYAARARDIRNAPHRVVDR--LANGDGNNDRDDAGTTLRATVNEMARLKTALADRTAQFEXXXXXXXXXXXXXXXXXXXXXXLATRNAKEKAEMESLVKSVVHAHSGELERQKAGFGQLQSTLDHYGE 1671
            +VEIYNN FH+LL   A  T+G  R +   +GGA    +G  XXXXXXXX         KIE+REHP+RGV+LSGG  GLRVPV+SA AV AL+ +G+ +R TA+T LN+RSSRSHA++ LEIEA  +                                           GP+  AR  +   GXXXXXXR       V++G++  +DLAGSERVS+S  EG +L EAQ+INLSL+LLGDVL++LSK +RA+A     XXXXXXXXXXXXXXXXXX AV E+PFVPYRNSKLTYLLKDSLGGNCKTLMVC VRAAPA FQQTM SLRYA RARDI+N PHRV++                GT+LR TV+E+  L+T L + TA+FE                      LA +N  EK  M+ L++ V+H+  GELE++KA F  LQ T+D + E
Sbjct:    8 YVEIYNNVFHNLLEGVADGTSGNRRGKSSHNGGARLSADGXXXXXXXXXXXXXXXXXSTKIEVREHPSRGVFLSGG-KGLRVPVSSANAVAALVARGTKSRRTASTGLNDRSSRSHAILILEIEATHSPPSAXXXXXXXXXXRARGDAVGGPSSSVPSGGLGSSNPAAGGVGPLGVARVGAGRRGXXXXXXRRRSIVECVSIGKMQLIDLAGSERVSMSEVEGSSLVEAQNINLSLTLLGDVLNSLSKYHRASARSXXXXXXXXXXXXXXXXXXXXXRAVGEKPFVPYRNSKLTYLLKDSLGGNCKTLMVCAVRAAPACFQQTMMSLRYAGRARDIKNVPHRVLEEGGXXXXXXXXXXXXNGTSLRGTVDEIENLRTKLVETTAEFERLRGATATGESEKKALRDQLKALAEKNRCEKERMDELLEGVIHSQRGELEKRKAEFVDLQDTMDSHAE 461          
BLAST of mRNA_P-wetherbeei_contig1093.2.1 vs. uniprot
Match: A0A6H5KDX4_9PHAE (Kinesin-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX4_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 8.220e-69
Identity = 203/487 (41.68%), Postives = 259/487 (53.18%), Query Frame = 1
Query:  490 FVEIYNNAFHSLLPA-APATAGPGRTRGGCSGGA-VNGGSXXXXXXXXRNGENS---EPKIELREHPTRGVYLSGGGAGLRVPVTSAEAVCALLRKGSAARATAATKLNERSSRSHAVVTLEIEALETGP------------------VAAARPSSPATGXXXXXX-----------------RG--------------VTMGRLTFVDLAGSERVSLSGAEGDTLAEAQSINLSLSLLGDVLSALSKLNRAAA----LXXXXXXXXXXXXXXXXXXXAV-ERPFVPYRNSKLTYLLKDSLGGNCKTLMVCTVRAAPAFFQQTMSSLRYAARARDIRNAPHRVVDR-------LANGDGNNDRDDAGTTLRATVNEMARLKTALADRTA----------------------------------QFEXXXXXXXXXXXXXXXXXXXXXXLATRNAKEKAEMESLVKSVVHAHSGELERQKAGFGQLQS 1650
            +VEIYNN FH+LL   A  T+G  R +   +GGA ++ GSXXXXXXXX           KIE+REHP+RGV+LSGG  GLRVPV+SA+AV  L+ +G+ +R TA+T LN+RSSRSHA++ LEIEA  + P                  V     S+P+ G                       RG              V++G++  +DLAGSERVS+S  EG +L EAQ+INLSL+LLGDVL++LSK +RA+A                        AV E+PFVPYRNSKLTYLLKDSLGGNCKTLMVC VRAAPAFFQQTM SLR+  RARDI+N PHRV++          +  G N     GT+LR TV+E+  L+T L + TA                                  +FE                      LA +N  EK  M+ L+  V+H+  GELE++KA F  LQ+
Sbjct:   40 YVEIYNNVFHNLLEGVADGTSGNRRGKSSHNGGARLSAGSXXXXXXXXXXXXXXXXXSTKIEVREHPSRGVFLSGG-KGLRVPVSSADAVAGLVARGTKSRRTASTGLNDRSSRSHAIMILEIEATHSPPSAXXXXXXXXXXRARGDAVGGPSSSAPSGGLGSSNPVAGGVGSLGVAKVGAGRRGXXXXXXXXXSIVECVSIGKMQLIDLAGSERVSMSEVEGSSLVEAQNINLSLTLLGDVLNSLSKYHRASARSSSAGGMEGAGSSSGAPPAGRGRAVGEKPFVPYRNSKLTYLLKDSLGGNCKTLMVCAVRAAPAFFQQTMMSLRW--RARDIKNVPHRVLEEGXXXXXXXRSXXGVN-----GTSLRGTVDEIENLRTKLVETTAVRVRYSHRTEGATCSVRLNAFLVTLLVLQNGRSEEFERLRGATATGESEKKALRDQLKALAEKNRCEKERMDELLAGVIHSQRGELEKRKAEFVDLQA 518          
BLAST of mRNA_P-wetherbeei_contig1093.2.1 vs. uniprot
Match: A0A2R5G630_9STRA (Kinesin-like protein KIF3A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G630_9STRA)

HSP 1 Score: 266 bits (681), Expect = 2.840e-68
Identity = 220/580 (37.93%), Postives = 291/580 (50.17%), Query Frame = 1
Query:   40 GDAAEAIVVCVRIRPDE---------EPDAACGLDLSGSCIDI-----RGQTKLTIVPPPERYSRPAEQ--RRVQPPTAHDFRFDRVFAPTDTQEDVFELVRPLVEATVEGFNATVFAYGQTGSGKTHTISGDSANPGILPRAVDLLFSRLNDDSRPELASMVFVS--FVEIYNNAFHSLLPAAPATAGPGRTRGGCSGGAVNGGSXXXXXXXXRNGENSEPKIELREHPTRGVYLSGGGAGLRVPVTSAEAVCALLRKGSAARATAATKLNERSSRSHAVVTLEIEALETGPVAAARPSSPATGXXXXXXRGVTMGRLTFVDLAGSERVSLSGAEGDTLAEAQSINLSLSLLGDVLSALSKLNRAAALXXXXXXXXXXXXXXXXXXXAVERPFVPYRNSKLTYLLKDSLGGNCKTLMVCTVRAAPAFFQQTMSSLRYAARARDIRNAPHRVVDRLANGDGNNDRDDAGTTLRATVNEMARLKTALADRTAQFEXXXXXXXXXXXXXXXXXXXXXX------LATRNAKEKAEMESLVKSVVHAHSGELERQKAGFGQLQSTLDHYGERIEQQRAQIEAL 1707
            G   E I V VRIRPDE         +  AA G   S S         + +T+ T      + S+ + +  R  +P T H   FDR+F P   QEDV+  V PLV +T++G+NAT+FAYG TGSGKTHTISG     GI+PRAV  +F+   + +  E   +V V   +VE+YNN F  LL +               G A +  S  XXXXXX    ++  +IEL    +  V+LSG  + L  PVTSA+    L++ GS  RA  AT  NE SSRSHA++T  +E+             P+        +   +G+L  VDLAGSER++LS AEG TL E Q+INLSLS LGDVLSALS+L+ + +                    A +R  VPYRNSKLT+LLKDSLGGN KTLM+ T+R    + QQT+ +L YA RA+ I N      D    GD         +   A V E+ RLK  L  R A FE                            LA  N  EK  +E+ ++ VVH H+  L  Q+  +  LQ  L  Y +  ++QR +IE L
Sbjct:    5 GGGRENIRVVVRIRPDEVRPGSKDVKKARAAKGAATSSSLTSSLASSSQARTEKTGASCVRQVSQASLEVLRGDKPRTFH---FDRIFGPETAQEDVYAAVDPLVASTIKGYNATIFAYGSTGSGKTHTISGAPGCEGIIPRAVHRIFALAGELADREADGIVLVQMGYVELYNNQFKDLLYSHAQ-----------HGDASSSASTAXXXXXXXXXXSTSHRIELHTTKSGSVFLSGTPS-LHTPVTSAQEALRLIQLGSRNRAVGATDCNEHSSRSHAILTFYVES-----------RIPSANGATSVAK---LGKLHLVDLAGSERLTLSKAEGQTLTETQNINLSLSTLGDVLSALSRLHSSGS-----------KAGSRRAATAADRACVPYRNSKLTFLLKDSLGGNSKTLMIATIRTPDLYQQQTLMTLMYAERAKKIENRIQLNTD--TEGD---------SKAAALVAEVERLKMQLRKREADFERLSRQTTAGNGGPLDAASERHRMEQLAKLAQENELEKDRLEACLRQVVHNHASTLTVQQEKYSSLQFKLAEYKDVFDKQRVEIETL 533          
BLAST of mRNA_P-wetherbeei_contig1093.2.1 vs. uniprot
Match: F0YE27_AURAN (Kinesin-like protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE27_AURAN)

HSP 1 Score: 232 bits (592), Expect = 1.360e-64
Identity = 159/372 (42.74%), Postives = 203/372 (54.57%), Query Frame = 1
Query:  235 FRFDRVFAPTDTQEDVFELVRPLVEATVEGFNATVFAYGQTGSGKTHTISGDSANPGILPRAVDLLFSRLNDDSRPELAS-MVFVSFVEIYNNAFHSLLPAAPATAGPGRTRGGCSGGAVNGGSXXXXXXXXRNGENSEPKIELREHPTRGVYLSGGGAGLRVPVTSAEAVCALLRKGSAARATAATKLNERSSRSHAVVTLEIEALETGPVAAARPSSPATGXXXXXXRGVTMGRLTFVDLAGSERVSLSGAEGDTLAEAQSINLSLSLLGDVLSALSKLNRAAALXXXXXXXXXXXXXXXXXXXAVERPFVPYRNSKLTYLLKDSLGGNCKTLMVCTVRAAPAFFQQTMSSLRYAARARDIRNAPHRVVD 1347
            F  D V  P   Q+DV+E VRPL  + V+G+NATVFAYG TGSGKTHT++G +  PG+ PRAV  +F  +   +R E A  +V VS+VE+YNN F +LL      A                               S+ KIE+RE    G++L GG   L+VPV S   V  L+  G   R  A+T  NE SSRSH V+TL +E+  T                        +G+L  VDLAGSERV++SGAEG+TL EAQ+INLSL+LLGDVL+ALS+                              P VPYRNSKLT+LLKDSLGGN KTLM+  +RA   +++Q++ SL YA+RAR I NA    VD
Sbjct:    6 FTVDGVLGPRSRQDDVYEHVRPLALSVVDGYNATVFAYGHTGSGKTHTMTGTAREPGVTPRAVRDVFGAIERAARRESAVFLVHVSYVELYNNVFRNLLEDRHDHAP------------------------------SQGKIEIRESRDSGIFL-GGPPNLKVPVKSERDVRDLVAFGDRQRQYASTNCNEHSSRSHCVLTLHVESRWT----------------ESNRHSCRLGKLNLVDLAGSERVAVSGAEGETLVEAQNINLSLALLGDVLAALSR----------------NATRPKSQSPRPPEP-VPYRNSKLTHLLKDSLGGNSKTLMITNLRAHRDYYRQSLVSLMYASRARKITNATRVNVD 313          
BLAST of mRNA_P-wetherbeei_contig1093.2.1 vs. uniprot
Match: A0A5A8CVH4_CAFRO (Kinesin motor domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CVH4_CAFRO)

HSP 1 Score: 224 bits (570), Expect = 5.180e-55
Identity = 172/406 (42.36%), Postives = 217/406 (53.45%), Query Frame = 1
Query:  226 AHDFRFDRVFAPTDTQEDVFELVRPLVEATVEGFNATVFAYGQTGSGKTHTISG----DSA---------NPGILPRAVDLLFSRLNDDSRPELASMVFVSFVEIYNNAFHSLL--PAAPATAGPGRTRGGCSGGAVNGGSXXXXXXXXRNG-------------ENSEPKIELREHPTRGVYLSGGGAGLRVPVTSAEAVCALLRKGSAARATAATKLNERSSRSHAVVTLEIEAL-------ETGPVAAARPSS-PATGXXXXXXRG-VTMGRLTFVDLAGSERVSLSGAEGDT--LAEAQSINLSLSLLGDVLSALSKLNRAAALXXXXXXXXXXXXXXXXXXXAVERPFVPYRNSKLTYLLKDSLGGNCKTLMVCTVRAAPAFFQQTMSSLRYAARARDIRN 1326
            A  F FDRVFAP  TQ DVF  VRPLVE  V G+NATV AYG TGSGKTH+I G    D+A           G+L R V  LFSR+ D +  E    V +S+VE+YNN F  LL   AA   A    T       A NG           +                S PKI +RE  +RGV+L G    LRVPV+S      L+ +G+  RA  AT LN  SSRSHA+V +++E++       +    AAA P +  A+G      R  V +GRL  VDLAGSER+S+SGA  D   LAE QSINLSL++L DVLS L++    A +                         VPYRNSKLT+LL+DSLGG+ +T+M+  VR     ++QT+ +L+YA RAR IRN
Sbjct: 1380 ARPFVFDRVFAPDATQTDVFAQVRPLVEGVVSGYNATVMAYGSTGSGKTHSIMGQGGIDAALESSGAVGPGSGVLARTVSALFSRIADRAA-EREFTVRLSYVELYNNNFRDLLHKSAAAGDAVRAETTARSLADAFNGADAEEATSSSASAAASGQPQNMADRDSPSGPKISIRESRSRGVFLEGSPT-LRVPVSSVVDCLRLVAEGTRNRAVGATDLNAHSSRSHAIVIIDVESIAKDSADEDAVAAAAATPGAVTASGRPRRRRRAPVRLGRLCVVDLAGSERLSMSGAWRDEARLAETQSINLSLTVLADVLSTLAEAKGTAPV------------------------MVPYRNSKLTFLLRDSLGGSARTVMLVHVRPTSPHYRQTLVTLQYAQRARAIRN 1759          
BLAST of mRNA_P-wetherbeei_contig1093.2.1 vs. uniprot
Match: A0A5A8D404_CAFRO (Kinesin motor domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D404_CAFRO)

HSP 1 Score: 217 bits (552), Expect = 1.830e-53
Identity = 170/413 (41.16%), Postives = 215/413 (52.06%), Query Frame = 1
Query:  226 AHDFRFDRVFAPTDTQEDVFELVRPLVEATVEGFNATVFAYGQTGSGKTHTISG----DSA---------NPGILPRAVDLLFSRLNDDSRPELASMVFVSFVEIYNNAFHSLL--PAAPATAGPGRTRGGCSGGAVNGGSXXXXXXXXRNG-------------ENSEPKIELREHPTRGVYLSGGGAGLRVPVTSAEAVCALLRKGSAARATAATKLNERSSRSHAVVTLEIEALETGPVAAARPSSP---------------ATGXXXXXXRG-VTMGRLTFVDLAGSERVSLSGAEGDT--LAEAQSINLSLSLLGDVLSALSKLNRAAALXXXXXXXXXXXXXXXXXXXAVERPFVPYRNSKLTYLLKDSLGGNCKTLMVCTVRAAPAFFQQTMSSLRYAARARDIRN 1326
            A  F FDRVFAP  TQ DVF  VRPLVE  V G+NATV AYG TGSGKTH+I G    D+A           G+L R V  LFSR+ D +  E    V +S+VE+YNN F  LL   AA   A    T       A NG           +                S PKI +RE  +RGV+L G    LRVPV+S      L+ +G+  RA  AT LN  SSRSHA+V +++E++       A+ S+                A+G      R  V +GRL  VDLAGSER+S+SGA  D   LAE QSINLSL++L DVLS L++    A +                         VPYRNSKLT+LL+DSLGG+ +T+M+  VR     ++QT+ +L+YA RAR IRN
Sbjct:  117 ARPFVFDRVFAPDATQTDVFAQVRPLVEGVVSGYNATVMAYGSTGSGKTHSIMGQGGIDAALESSGAVGPGSGVLARTVSALFSRIADRAA-EREFTVRLSYVELYNNNFRDLLHKSAAAGDAVRAETTARSLADAFNGADADEATSSSASAAASGQPQNMADRDSPSGPKISIRESRSRGVFLEGSPT-LRVPVSSVVDCLRLVAEGTRNRAVGATDLNAHSSRSHAIVIIDVESI-------AKDSADEDAXXXXXXXXXXVTASGRPRRRRRAPVRLGRLCVVDLAGSERLSMSGAWRDEARLAETQSINLSLTVLADVLSTLAEAKGTAPV------------------------MVPYRNSKLTFLLRDSLGGSARTVMLVHVRPTSPHYRQTLVTLQYAQRARAIRN 496          
BLAST of mRNA_P-wetherbeei_contig1093.2.1 vs. uniprot
Match: A0A5A8DZ16_CAFRO (Kinesin motor domain-containing protein n=5 Tax=Sar TaxID=2698737 RepID=A0A5A8DZ16_CAFRO)

HSP 1 Score: 217 bits (552), Expect = 3.720e-53
Identity = 170/413 (41.16%), Postives = 215/413 (52.06%), Query Frame = 1
Query:  226 AHDFRFDRVFAPTDTQEDVFELVRPLVEATVEGFNATVFAYGQTGSGKTHTISG----DSA---------NPGILPRAVDLLFSRLNDDSRPELASMVFVSFVEIYNNAFHSLL--PAAPATAGPGRTRGGCSGGAVNGGSXXXXXXXXRNG-------------ENSEPKIELREHPTRGVYLSGGGAGLRVPVTSAEAVCALLRKGSAARATAATKLNERSSRSHAVVTLEIEALETGPVAAARPSSP---------------ATGXXXXXXRG-VTMGRLTFVDLAGSERVSLSGAEGDT--LAEAQSINLSLSLLGDVLSALSKLNRAAALXXXXXXXXXXXXXXXXXXXAVERPFVPYRNSKLTYLLKDSLGGNCKTLMVCTVRAAPAFFQQTMSSLRYAARARDIRN 1326
            A  F FDRVFAP  TQ DVF  VRPLVE  V G+NATV AYG TGSGKTH+I G    D+A           G+L R V  LFSR+ D +  E    V +S+VE+YNN F  LL   AA   A    T       A NG           +                S PKI +RE  +RGV+L G    LRVPV+S      L+ +G+  RA  AT LN  SSRSHA+V +++E++       A+ S+                A+G      R  V +GRL  VDLAGSER+S+SGA  D   LAE QSINLSL++L DVLS L++    A +                         VPYRNSKLT+LL+DSLGG+ +T+M+  VR     ++QT+ +L+YA RAR IRN
Sbjct:  117 ARPFVFDRVFAPDATQTDVFAQVRPLVEGVVSGYNATVMAYGSTGSGKTHSIMGQGGIDAALESSGAVGPGSGVLARTVSALFSRIADRAA-EREFTVRLSYVELYNNNFRDLLHKSAAAGDAVRAETTARSLADAFNGADADEATSSSASAAASGQPQNMADRDSPSGPKISIRESRSRGVFLEGSPT-LRVPVSSVVDCLRLVAEGTRNRAVGATDLNAHSSRSHAIVIIDVESI-------AKDSADEDAXXXXXXXXXXVTASGRPRRRRRAPVRLGRLCVVDLAGSERLSMSGAWRDEARLAETQSINLSLTVLADVLSTLAEAKGTAPV------------------------MVPYRNSKLTFLLRDSLGGSARTVMLVHVRPTSPHYRQTLVTLQYAQRARAIRN 496          
BLAST of mRNA_P-wetherbeei_contig1093.2.1 vs. uniprot
Match: A0A8J5XSN5_DIALT (Kinesin motor domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XSN5_DIALT)

HSP 1 Score: 215 bits (547), Expect = 6.370e-53
Identity = 167/415 (40.24%), Postives = 210/415 (50.60%), Query Frame = 1
Query:  226 AHDFRFDRVFAPTDTQEDVFELVRPLVEATVEGFNATVFAYGQTGSGKTHTISGDSANPGILPRAVDLLFSRLNDDSRPELASMVFVSFVEIYNNAFHSLLPAAPATAGPGRTRGGCSGGAVNGGSXXXXXXXXRNGENSEPKIELREHPTRG-----VYLSGGGAGLRVPVTSAEAVCALLRKGSAARATAATKLNERSSRSHAVVTLEIEALETGPVAAARPSSPATGXXXXXXRGVTMGRLTFVDLAGSERVSLSGAEGDTLAEAQSINLSLSLLGDVLSALSKLNRAAALXXXXXXXXXXXXXXXXXXXAVER-PFVPYRNSKLTYLLKDSLGGNCKTLMVCTVRAAPAFFQQTMSSLRYAARARDIRNAPHRVVDRLANGDGNNDRDDAGTTLRATVNEMARLKTALADR 1452
            A  + FD V  PT TQEDV+    P VEA ++G NA +F YGQTGSGKTHT+ G +  PG++ RA   LF+    D+RPE    + V++VE+YNN F  LL  AP    P R R                             I L E PT       VYLSG    LR PV SA+ +  L+  G+AARATA+TKLN  SSRSHA++TL +EA + G   A                   +G++  VDLAGSE ++LSGAEG T  EAQ+IN SLS L DVL ALSK                          AV     +PYRN KLT LL DS+GGN KTLM+ TV    +  +QT  +  +AARAR IR  P+  +   A   G          L A  +E+  L++ LA R
Sbjct:  115 AKAYGFDAVLPPTATQEDVWAECAPFVEAPLDGLNACIFTYGQTGSGKTHTMLGTAEEPGVVRRACARLFAAA--DARPEAEFQLSVTYVELYNNEFKDLL--APDNQ-PDRRR---------------ALPIELEAARKRRPIALHELPTAAGQPPSVYLSGSET-LRTPVRSADELLELVAFGAAARATASTKLNAFSSRSHAILTLHVEARDAGAPTA------------------RVGKVHLVDLAGSENLTLSGAEGGTRVEAQAINASLSALADVLEALSKRGAHPTAPGVPNSPRREGGTPAAARAAVGGVASIPYRNHKLTRLLADSIGGNSKTLMLTTVLPFASCHRQTTMAAHFAARARAIR--PYAPLAPPAEHIG-------ARALAALTSELEMLRSRLAQR 481          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1093.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8L1_9STRA2.240e-8647.55Kinesin-like protein n=1 Tax=Tribonema minus TaxID... [more]
A0A7S4E6T1_9STRA1.720e-7337.31Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
D8LT23_ECTSI5.800e-7350.11Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KDX4_9PHAE8.220e-6941.68Kinesin-like protein n=1 Tax=Ectocarpus sp. CCAP 1... [more]
A0A2R5G630_9STRA2.840e-6837.93Kinesin-like protein KIF3A n=1 Tax=Hondaea ferment... [more]
F0YE27_AURAN1.360e-6442.74Kinesin-like protein (Fragment) n=1 Tax=Aureococcu... [more]
A0A5A8CVH4_CAFRO5.180e-5542.36Kinesin motor domain-containing protein n=1 Tax=Ca... [more]
A0A5A8D404_CAFRO1.830e-5341.16Kinesin motor domain-containing protein n=1 Tax=Ca... [more]
A0A5A8DZ16_CAFRO3.720e-5341.16Kinesin motor domain-containing protein n=5 Tax=Sa... [more]
A0A8J5XSN5_DIALT6.370e-5340.24Kinesin motor domain-containing protein n=1 Tax=Di... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1093contigP-wetherbeei_contig1093:2419..7897 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LT23
PFAMsKinesin
Model size4617
Max annot lvl2759|Eukaryota
KEGG koko:K10401,ko:K11498
Hectar predicted targeting categoryother localisation
Exons4
Evalue7.33e-74
EggNOG OGsCOG5059@1|root,KOG0242@2759|Eukaryota
Descriptionmicrotubule motor activity
Cds size4416
COG categoryZ
BRITEko00000,ko01009,ko03036,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1093.2.1prot_P-wetherbeei_contig1093.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1093 2455..7732 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185890.5834394-UTR-P-wetherbeei_contig1093:2418..24541683185890.5834394-UTR-P-wetherbeei_contig1093:2418..2454Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1093 2419..2454 +
1683185890.6263325-UTR-P-wetherbeei_contig1093:7732..78971683185890.6263325-UTR-P-wetherbeei_contig1093:7732..7897Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1093 7733..7897 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185890.5963802-CDS-P-wetherbeei_contig1093:2454..26941683185890.5963802-CDS-P-wetherbeei_contig1093:2454..2694Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1093 2455..2694 +
1683185890.605096-CDS-P-wetherbeei_contig1093:3123..32451683185890.605096-CDS-P-wetherbeei_contig1093:3123..3245Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1093 3124..3245 +
1683185890.6120083-CDS-P-wetherbeei_contig1093:3535..43761683185890.6120083-CDS-P-wetherbeei_contig1093:3535..4376Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1093 3536..4376 +
1683185890.619061-CDS-P-wetherbeei_contig1093:4519..77321683185890.619061-CDS-P-wetherbeei_contig1093:4519..7732Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1093 4520..7732 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1093.2.1

>prot_P-wetherbeei_contig1093.2.1 ID=prot_P-wetherbeei_contig1093.2.1|Name=mRNA_P-wetherbeei_contig1093.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1472bp
MGDAAEAIVVCVRIRPDEEPDAACGLDLSGSCIDIRGQTKLTIVPPPERY
SRPAEQRRVQPPTAHDFRFDRVFAPTDTQEDVFELVRPLVEATVEGFNAT
VFAYGQTGSGKTHTISGDSANPGILPRAVDLLFSRLNDDSRPELASMVFV
SFVEIYNNAFHSLLPAAPATAGPGRTRGGCSGGAVNGGSGGTNGGSGRNG
ENSEPKIELREHPTRGVYLSGGGAGLRVPVTSAEAVCALLRKGSAARATA
ATKLNERSSRSHAVVTLEIEALETGPVAAARPSSPATGGGGGGGRGVTMG
RLTFVDLAGSERVSLSGAEGDTLAEAQSINLSLSLLGDVLSALSKLNRAA
ALAAAAGGSSSSGGSVPAAAAAVERPFVPYRNSKLTYLLKDSLGGNCKTL
MVCTVRAAPAFFQQTMSSLRYAARARDIRNAPHRVVDRLANGDGNNDRDD
AGTTLRATVNEMARLKTALADRTAQFERLKQATAAGGAEAALLKREVAAL
ATRNAKEKAEMESLVKSVVHAHSGELERQKAGFGQLQSTLDHYGERIEQQ
RAQIEALERERETATAAAAAAAAEAVAVAAEAAGAAARLEGAGTELRAER
DARAADGAAAAAAAAASSAEAERYRKALKRLAKERDRLLAELEAAKQMPP
PPPANGASAAATAVAASFGVAEAEAALAVAEAVSEQLHERLADETARAWR
LEAALAAATVEAKAAAAVREADFEAERRRLAADLDSLMAAAAATAARAEA
AGGEERRQLEAALMQLRRDLESRAVAAEDALAAAEAVAATAARERAEAMQ
DARTQHAAAMAAAVAEAEERAARKSDAAMAAERHRRKDAEDKLRQATEQR
AAEEAAAAATAVATALAAAEAVHAAALDGLRREHAVALAAAVAAKVAEAV
EAAGAAKRLDAAHKAALTEQERRASSERRRAEAAAAEATAAAAAGMAAAT
EEAAALRRRADGLDEELASARSAEAAAMAASEAAREECNVVASKYSALKV
DRRRLKEKYDKAVSVGAAAAAHVAELEAAMRAAQATATAAATALEAAAAS
AVQDRAAALAQAATQRQAAESAAAAAAQEWATQAVAQRQQQAAVTEAAST
RAHAAEAERDAATARADTAAARADAAMAQVEAASRELTALRALREADAAE
RRGLEQEVRMASGDAADAGAHSEFMLRREEDMAAQRRQLFRQAEEQRAAA
AAAEAQAEAAVAEAARWEDVAAAAAANGARLAAELAAARAAVAAQAADAD
AARQEAAATAMALLTAEQALAAEKRRGGAREAEATALRAELAVKAEIVVK
LMRYCGGGSGVVAAAIPDSRLTGLGLPTVNGARSGSNGGAIAEICAANDG
GGGDDGGSTGNENNHSGVTLTSQSGESNFSELMSAIAAVTTAGRASSVSP
PAGTAKLTLGTAALPLSPVRSRSGGRRGSARGGCGAESGGGNGIGSDDSG
DGGGGAGSSEVRYLAIPKEAT*
back to top

mRNA from alignment at P-wetherbeei_contig1093:2419..7897+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1093.2.1 ID=mRNA_P-wetherbeei_contig1093.2.1|Name=mRNA_P-wetherbeei_contig1093.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5479bp|location=Sequence derived from alignment at P-wetherbeei_contig1093:2419..7897+ (Phaeothamnion wetherbeei SAG_119_79)
TTTTCCATAACCGAAAGGGGGGAAAGAAAGGAATGCATGGGCGATGCCGC TGAGGCCATCGTAGTGTGCGTACGGATCCGCCCCGATGAAGAGCCCGACG CCGCGTGCGGCCTTGATCTCTCGGGTTCCTGCATTGATATTCGAGGTCAA ACAAAGCTGACGATTGTCCCACCGCCGGAGCGGTACAGCCGTCCAGCGGA GCAGCGTCGGGTGCAGCCCCCAACGGCTCACGATTTCAGGTTCGACCGCG TCTTTGCGCCAACAGACACGCAAGAGGTGATTTTGAAAGGCAACGACGAC GGCGTGTTGTACGTCTTGTGTTAGGCAGCGTCGCATGTCGAAAAGATACT TTTTAGTTCTCTTCTTGAAGAGAGCTAATTGTCCTAAGTCCTTTAATACA TACAAAAGATTGGTGAGGATTAAGGAGTCATCTCTCTTGCCGAGTACAGA ACTGCTGTTGACCCCGAATTGCTAAAGTTTGTTTAAGTGTGCTTGGAAGA GGACAAAAAGGCTGCCCGGGTGTAGTTTGCCTCGCGTATTTTTTTGGGGG TACCTTTTCCGTCGCCGTCTGTCGTCGTTTTTCTTGTTGTTTGCCCGTCG CCATCTGGAAGCTCATACCCTTACTCGCACACAGTCATGATGCAGTTTAC ACTCGGTGGCCATCAATGCAACGCTCGCTGCCACCTCTGACTTGTCAATT TGCAGGATGTCTTCGAGTTGGTGCGCCCGCTGGTCGAGGCCACAGTGGAG GGATTCAATGCCACCGTATTCGCCTATGGCCAGACAGGCTCGGGAAAGAC ACACACGATCAGTGGGGACAGCGCCAAGTGAGCTTTGCTGCTTGCCCCGT GTCGTCGTACCTGCCTGCGTGCTGTTTCCTTTGTAGTTTATCCTCCTCTC TTTTGTTTTTTAGAAGGTTGGAACTGTAAACAAACGGTGAATTATACATC AAGCAAGTTTATGATAGAGCTCCTTTCGCGTTGAAGAGGAGTTGGCTGCA TTGTTGTCGCTTTCGAGGCCGCCTTGAAACTTATTTTGGCCTTCCATGAA GGCGGCAGTTACCTAATTCTGATCTCCTCCTTTCTTCCGCCCTTCTTTCA TCCCCACATGCCGACAGCCCGGGAATTCTGCCGCGCGCGGTAGACCTCCT TTTCTCGCGGCTCAACGATGACAGCCGCCCGGAGCTCGCCTCGATGGTCT TTGTCTCTTTCGTCGAAATCTACAACAACGCATTTCACTCCCTCCTCCCG GCTGCCCCCGCCACCGCCGGGCCTGGTCGAACACGCGGCGGCTGTAGCGG TGGCGCCGTTAATGGCGGCAGCGGCGGCACTAATGGAGGCAGCGGCCGCA ACGGTGAGAACAGCGAGCCGAAGATCGAGCTTCGGGAGCACCCGACGCGC GGCGTCTATTTGTCGGGGGGCGGCGCAGGGTTGCGCGTGCCGGTGACGTC CGCGGAGGCGGTCTGCGCGCTGCTGCGGAAGGGTTCTGCCGCGCGAGCGA CGGCGGCGACGAAACTGAACGAACGGAGCAGCCGCAGCCATGCTGTTGTC ACCCTCGAGATTGAGGCCCTCGAGACCGGCCCGGTGGCGGCGGCGAGGCC GTCTTCCCCTGCTACTGGCGGAGGCGGCGGTGGCGGCCGCGGGGTGACGA TGGGGCGGCTGACGTTTGTGGATCTGGCGGGCTCGGAGCGGGTATCGCTG TCGGGAGCCGAGGGGGACACGCTCGCTGAAGCACAGAGCATCAACCTGTC GCTTTCGCTGCTAGGAGATGTTCTCAGCGCGCTCTCCAAGCTCAACCGGG CCGCTGCCCTGGCTGCCGCCGCCGGCGGCAGCAGCAGCAGCGGTGGCTCT GTGCCAGCGGCCGCGGCGGCTGTGGAACGGCCTTTTGTGCCGTACCGTAA CTCGAAGCTGACGTACCTGTTGAAGGACTCGCTGGGCGGCAACTGCAAGA CTTTGATGGTGCATCCGTTTGGAAAGCGAATGATTCTCGCTTGAACACAG GCGCTGCTTCAAGCCCTGCCCGGGTTCTTTTCTGAGACGTTCTCGACCAT TTACCCTTTTCCGCTACCATCTCCCCTATGCGATGCCGGACGGGCGGGCA GGTCTGCACGGTGCGCGCCGCACCGGCCTTCTTCCAGCAGACGATGAGCT CCCTCCGCTACGCGGCGCGCGCCCGCGACATAAGGAACGCCCCACACCGC GTAGTGGACCGGCTCGCAAACGGCGACGGCAACAACGACCGTGACGACGC CGGCACGACGCTCCGGGCGACCGTCAACGAGATGGCACGGCTGAAGACGG CGCTGGCCGACCGGACGGCGCAGTTCGAGCGGTTGAAGCAGGCAACAGCG GCTGGGGGCGCCGAGGCGGCGCTCCTCAAACGGGAAGTGGCGGCGCTGGC GACGCGCAACGCCAAGGAAAAGGCCGAGATGGAGAGTCTCGTAAAGAGTG TCGTCCACGCGCATTCGGGCGAGCTGGAGCGGCAGAAGGCGGGTTTTGGC CAGCTGCAGTCGACGCTCGACCACTACGGGGAGCGGATCGAGCAGCAGCG TGCGCAGATAGAGGCGCTAGAGAGGGAGCGGGAGACAGCGACAGCCGCGG CGGCGGCGGCCGCGGCTGAGGCGGTGGCAGTGGCGGCCGAGGCGGCGGGC GCAGCGGCGCGGTTGGAAGGAGCCGGCACAGAGCTGCGCGCGGAGCGGGA CGCGCGGGCGGCGGACGGCGCGGCGGCAGCGGCCGCGGCGGCGGCGTCCT CTGCTGAGGCGGAGCGCTACCGCAAGGCGCTGAAGCGGCTGGCGAAGGAG CGGGATCGCCTGCTGGCAGAGCTCGAAGCGGCGAAGCAAATGCCGCCGCC ACCACCAGCTAACGGTGCTTCGGCCGCCGCCACCGCTGTCGCAGCATCGT TTGGTGTTGCGGAGGCGGAGGCCGCACTTGCGGTGGCGGAAGCCGTCTCG GAACAGCTGCACGAGCGGCTCGCAGACGAAACGGCGCGAGCATGGCGGCT CGAGGCAGCGCTTGCCGCCGCCACAGTCGAAGCGAAGGCAGCGGCTGCGG TACGAGAGGCAGACTTCGAAGCAGAGCGGCGTCGGTTGGCGGCTGACTTG GACTCTCTGATGGCAGCAGCGGCGGCAACAGCGGCACGCGCCGAGGCCGC TGGTGGAGAAGAACGCAGGCAGCTGGAGGCGGCATTGATGCAGCTGAGAC GGGACCTCGAGAGCCGTGCGGTGGCGGCAGAGGACGCTCTTGCAGCAGCC GAGGCGGTCGCGGCAACGGCGGCGCGGGAGAGGGCCGAGGCGATGCAGGA CGCACGGACGCAGCACGCCGCGGCTATGGCAGCAGCAGTCGCCGAAGCGG AAGAGCGCGCAGCGCGAAAGTCCGACGCAGCGATGGCCGCCGAGCGGCAC CGGAGGAAGGACGCGGAGGATAAATTGAGGCAGGCGACAGAGCAGCGGGC CGCCGAAGAGGCGGCGGCGGCAGCGACAGCGGTGGCGACGGCGCTGGCGG CGGCCGAAGCGGTGCACGCGGCGGCGCTCGATGGGCTTAGGCGTGAGCAC GCTGTTGCTCTTGCGGCGGCAGTAGCGGCCAAGGTGGCAGAGGCGGTCGA AGCGGCAGGGGCGGCGAAACGCCTTGACGCAGCGCACAAGGCGGCATTAA CAGAGCAGGAGCGGCGAGCGTCCTCGGAGCGGCGGCGGGCCGAGGCTGCA GCAGCCGAGGCAACCGCAGCTGCGGCCGCCGGGATGGCGGCGGCGACGGA GGAGGCGGCAGCACTGCGGCGGCGGGCGGATGGACTCGACGAAGAGTTGG CGTCCGCTCGGAGCGCCGAGGCGGCAGCGATGGCAGCGTCGGAGGCCGCT CGGGAGGAGTGCAATGTCGTGGCTTCAAAGTACTCAGCACTTAAAGTTGA CCGGCGGCGGCTCAAGGAGAAGTACGACAAGGCGGTCTCGGTCGGCGCGG CGGCGGCGGCGCACGTCGCCGAGCTGGAGGCAGCCATGAGAGCCGCACAG GCGACGGCGACGGCTGCCGCGACGGCACTTGAGGCGGCGGCAGCTTCGGC GGTGCAAGACCGCGCCGCCGCCCTCGCGCAGGCGGCGACGCAGCGCCAGG CCGCGGAGTCCGCGGCGGCAGCGGCGGCGCAGGAGTGGGCGACGCAGGCG GTGGCACAGCGCCAGCAGCAGGCTGCCGTGACGGAAGCGGCGAGCACCCG AGCCCATGCGGCGGAGGCCGAGCGCGACGCGGCGACGGCGCGCGCTGATA CTGCGGCGGCGCGGGCGGATGCGGCGATGGCGCAGGTCGAAGCCGCGTCG CGCGAGCTGACGGCGCTGCGGGCACTTCGGGAGGCGGATGCAGCAGAAAG ACGCGGGCTGGAGCAGGAGGTGCGCATGGCGAGCGGGGACGCTGCCGACG CCGGTGCCCACTCTGAGTTCATGCTGCGCCGCGAGGAGGACATGGCGGCG CAGCGGCGGCAGCTCTTCCGGCAGGCGGAGGAGCAGCGGGCGGCGGCGGC AGCCGCCGAGGCCCAGGCAGAGGCAGCGGTGGCGGAAGCCGCACGCTGGG AGGATGTGGCAGCGGCGGCGGCTGCGAACGGCGCGCGGCTGGCAGCGGAG CTGGCGGCGGCGCGGGCGGCGGTGGCGGCGCAGGCGGCGGACGCGGACGC GGCGCGGCAGGAGGCGGCGGCCACAGCGATGGCGTTGCTCACGGCAGAGC AGGCGCTTGCGGCAGAAAAACGGCGCGGTGGGGCGCGGGAGGCAGAGGCG ACGGCGCTGCGAGCAGAGCTCGCCGTCAAGGCGGAGATCGTCGTCAAGCT GATGCGCTACTGCGGCGGCGGCAGCGGCGTCGTCGCCGCCGCCATCCCAG ATTCCCGCCTCACGGGACTGGGACTGCCTACCGTCAACGGCGCCCGCAGC GGGAGCAACGGCGGTGCGATTGCCGAAATTTGTGCTGCCAATGACGGTGG CGGCGGTGATGACGGAGGGAGCACCGGCAACGAGAACAACCATAGTGGAG TTACGTTGACGTCACAGAGTGGCGAATCAAACTTCTCGGAGCTGATGTCG GCGATTGCGGCGGTAACGACGGCGGGCCGAGCCTCAAGCGTCTCTCCGCC CGCGGGCACCGCCAAACTGACGCTGGGGACCGCGGCGTTGCCGCTGTCGC CGGTGCGGAGCCGGTCCGGTGGACGCCGCGGCAGCGCCAGAGGGGGCTGC GGGGCAGAGAGCGGCGGTGGCAACGGAATTGGCAGTGATGATAGTGGCGA TGGCGGTGGTGGCGCTGGCAGCAGCGAGGTGCGGTATTTGGCGATTCCGA AGGAGGCCACATGATGAGCGGGCTCCTTGCAGCGCAACACTGCGACGATT TGCTGTTGAGATGTATTTTTGATACTTAGAGGTAAAGTGTTGCACCCTAG AAAAGTATGGTAGGTACAGGCCGAGGTGGTTTATTTTGGCCCGAAGGTAG ACTGGACTTTTAATAAAGTCTTTTACATG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1093:2419..7897+

>mRNA_P-wetherbeei_contig1093.2.1 ID=mRNA_P-wetherbeei_contig1093.2.1|Name=mRNA_P-wetherbeei_contig1093.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=4416bp|location=Sequence derived from alignment at P-wetherbeei_contig1093:2419..7897+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCGATGCCGCTGAGGCCATCGTAGTGTGCGTACGGATCCGCCCCGA
TGAAGAGCCCGACGCCGCGTGCGGCCTTGATCTCTCGGGTTCCTGCATTG
ATATTCGAGGTCAAACAAAGCTGACGATTGTCCCACCGCCGGAGCGGTAC
AGCCGTCCAGCGGAGCAGCGTCGGGTGCAGCCCCCAACGGCTCACGATTT
CAGGTTCGACCGCGTCTTTGCGCCAACAGACACGCAAGAGGATGTCTTCG
AGTTGGTGCGCCCGCTGGTCGAGGCCACAGTGGAGGGATTCAATGCCACC
GTATTCGCCTATGGCCAGACAGGCTCGGGAAAGACACACACGATCAGTGG
GGACAGCGCCAACCCGGGAATTCTGCCGCGCGCGGTAGACCTCCTTTTCT
CGCGGCTCAACGATGACAGCCGCCCGGAGCTCGCCTCGATGGTCTTTGTC
TCTTTCGTCGAAATCTACAACAACGCATTTCACTCCCTCCTCCCGGCTGC
CCCCGCCACCGCCGGGCCTGGTCGAACACGCGGCGGCTGTAGCGGTGGCG
CCGTTAATGGCGGCAGCGGCGGCACTAATGGAGGCAGCGGCCGCAACGGT
GAGAACAGCGAGCCGAAGATCGAGCTTCGGGAGCACCCGACGCGCGGCGT
CTATTTGTCGGGGGGCGGCGCAGGGTTGCGCGTGCCGGTGACGTCCGCGG
AGGCGGTCTGCGCGCTGCTGCGGAAGGGTTCTGCCGCGCGAGCGACGGCG
GCGACGAAACTGAACGAACGGAGCAGCCGCAGCCATGCTGTTGTCACCCT
CGAGATTGAGGCCCTCGAGACCGGCCCGGTGGCGGCGGCGAGGCCGTCTT
CCCCTGCTACTGGCGGAGGCGGCGGTGGCGGCCGCGGGGTGACGATGGGG
CGGCTGACGTTTGTGGATCTGGCGGGCTCGGAGCGGGTATCGCTGTCGGG
AGCCGAGGGGGACACGCTCGCTGAAGCACAGAGCATCAACCTGTCGCTTT
CGCTGCTAGGAGATGTTCTCAGCGCGCTCTCCAAGCTCAACCGGGCCGCT
GCCCTGGCTGCCGCCGCCGGCGGCAGCAGCAGCAGCGGTGGCTCTGTGCC
AGCGGCCGCGGCGGCTGTGGAACGGCCTTTTGTGCCGTACCGTAACTCGA
AGCTGACGTACCTGTTGAAGGACTCGCTGGGCGGCAACTGCAAGACTTTG
ATGGTCTGCACGGTGCGCGCCGCACCGGCCTTCTTCCAGCAGACGATGAG
CTCCCTCCGCTACGCGGCGCGCGCCCGCGACATAAGGAACGCCCCACACC
GCGTAGTGGACCGGCTCGCAAACGGCGACGGCAACAACGACCGTGACGAC
GCCGGCACGACGCTCCGGGCGACCGTCAACGAGATGGCACGGCTGAAGAC
GGCGCTGGCCGACCGGACGGCGCAGTTCGAGCGGTTGAAGCAGGCAACAG
CGGCTGGGGGCGCCGAGGCGGCGCTCCTCAAACGGGAAGTGGCGGCGCTG
GCGACGCGCAACGCCAAGGAAAAGGCCGAGATGGAGAGTCTCGTAAAGAG
TGTCGTCCACGCGCATTCGGGCGAGCTGGAGCGGCAGAAGGCGGGTTTTG
GCCAGCTGCAGTCGACGCTCGACCACTACGGGGAGCGGATCGAGCAGCAG
CGTGCGCAGATAGAGGCGCTAGAGAGGGAGCGGGAGACAGCGACAGCCGC
GGCGGCGGCGGCCGCGGCTGAGGCGGTGGCAGTGGCGGCCGAGGCGGCGG
GCGCAGCGGCGCGGTTGGAAGGAGCCGGCACAGAGCTGCGCGCGGAGCGG
GACGCGCGGGCGGCGGACGGCGCGGCGGCAGCGGCCGCGGCGGCGGCGTC
CTCTGCTGAGGCGGAGCGCTACCGCAAGGCGCTGAAGCGGCTGGCGAAGG
AGCGGGATCGCCTGCTGGCAGAGCTCGAAGCGGCGAAGCAAATGCCGCCG
CCACCACCAGCTAACGGTGCTTCGGCCGCCGCCACCGCTGTCGCAGCATC
GTTTGGTGTTGCGGAGGCGGAGGCCGCACTTGCGGTGGCGGAAGCCGTCT
CGGAACAGCTGCACGAGCGGCTCGCAGACGAAACGGCGCGAGCATGGCGG
CTCGAGGCAGCGCTTGCCGCCGCCACAGTCGAAGCGAAGGCAGCGGCTGC
GGTACGAGAGGCAGACTTCGAAGCAGAGCGGCGTCGGTTGGCGGCTGACT
TGGACTCTCTGATGGCAGCAGCGGCGGCAACAGCGGCACGCGCCGAGGCC
GCTGGTGGAGAAGAACGCAGGCAGCTGGAGGCGGCATTGATGCAGCTGAG
ACGGGACCTCGAGAGCCGTGCGGTGGCGGCAGAGGACGCTCTTGCAGCAG
CCGAGGCGGTCGCGGCAACGGCGGCGCGGGAGAGGGCCGAGGCGATGCAG
GACGCACGGACGCAGCACGCCGCGGCTATGGCAGCAGCAGTCGCCGAAGC
GGAAGAGCGCGCAGCGCGAAAGTCCGACGCAGCGATGGCCGCCGAGCGGC
ACCGGAGGAAGGACGCGGAGGATAAATTGAGGCAGGCGACAGAGCAGCGG
GCCGCCGAAGAGGCGGCGGCGGCAGCGACAGCGGTGGCGACGGCGCTGGC
GGCGGCCGAAGCGGTGCACGCGGCGGCGCTCGATGGGCTTAGGCGTGAGC
ACGCTGTTGCTCTTGCGGCGGCAGTAGCGGCCAAGGTGGCAGAGGCGGTC
GAAGCGGCAGGGGCGGCGAAACGCCTTGACGCAGCGCACAAGGCGGCATT
AACAGAGCAGGAGCGGCGAGCGTCCTCGGAGCGGCGGCGGGCCGAGGCTG
CAGCAGCCGAGGCAACCGCAGCTGCGGCCGCCGGGATGGCGGCGGCGACG
GAGGAGGCGGCAGCACTGCGGCGGCGGGCGGATGGACTCGACGAAGAGTT
GGCGTCCGCTCGGAGCGCCGAGGCGGCAGCGATGGCAGCGTCGGAGGCCG
CTCGGGAGGAGTGCAATGTCGTGGCTTCAAAGTACTCAGCACTTAAAGTT
GACCGGCGGCGGCTCAAGGAGAAGTACGACAAGGCGGTCTCGGTCGGCGC
GGCGGCGGCGGCGCACGTCGCCGAGCTGGAGGCAGCCATGAGAGCCGCAC
AGGCGACGGCGACGGCTGCCGCGACGGCACTTGAGGCGGCGGCAGCTTCG
GCGGTGCAAGACCGCGCCGCCGCCCTCGCGCAGGCGGCGACGCAGCGCCA
GGCCGCGGAGTCCGCGGCGGCAGCGGCGGCGCAGGAGTGGGCGACGCAGG
CGGTGGCACAGCGCCAGCAGCAGGCTGCCGTGACGGAAGCGGCGAGCACC
CGAGCCCATGCGGCGGAGGCCGAGCGCGACGCGGCGACGGCGCGCGCTGA
TACTGCGGCGGCGCGGGCGGATGCGGCGATGGCGCAGGTCGAAGCCGCGT
CGCGCGAGCTGACGGCGCTGCGGGCACTTCGGGAGGCGGATGCAGCAGAA
AGACGCGGGCTGGAGCAGGAGGTGCGCATGGCGAGCGGGGACGCTGCCGA
CGCCGGTGCCCACTCTGAGTTCATGCTGCGCCGCGAGGAGGACATGGCGG
CGCAGCGGCGGCAGCTCTTCCGGCAGGCGGAGGAGCAGCGGGCGGCGGCG
GCAGCCGCCGAGGCCCAGGCAGAGGCAGCGGTGGCGGAAGCCGCACGCTG
GGAGGATGTGGCAGCGGCGGCGGCTGCGAACGGCGCGCGGCTGGCAGCGG
AGCTGGCGGCGGCGCGGGCGGCGGTGGCGGCGCAGGCGGCGGACGCGGAC
GCGGCGCGGCAGGAGGCGGCGGCCACAGCGATGGCGTTGCTCACGGCAGA
GCAGGCGCTTGCGGCAGAAAAACGGCGCGGTGGGGCGCGGGAGGCAGAGG
CGACGGCGCTGCGAGCAGAGCTCGCCGTCAAGGCGGAGATCGTCGTCAAG
CTGATGCGCTACTGCGGCGGCGGCAGCGGCGTCGTCGCCGCCGCCATCCC
AGATTCCCGCCTCACGGGACTGGGACTGCCTACCGTCAACGGCGCCCGCA
GCGGGAGCAACGGCGGTGCGATTGCCGAAATTTGTGCTGCCAATGACGGT
GGCGGCGGTGATGACGGAGGGAGCACCGGCAACGAGAACAACCATAGTGG
AGTTACGTTGACGTCACAGAGTGGCGAATCAAACTTCTCGGAGCTGATGT
CGGCGATTGCGGCGGTAACGACGGCGGGCCGAGCCTCAAGCGTCTCTCCG
CCCGCGGGCACCGCCAAACTGACGCTGGGGACCGCGGCGTTGCCGCTGTC
GCCGGTGCGGAGCCGGTCCGGTGGACGCCGCGGCAGCGCCAGAGGGGGCT
GCGGGGCAGAGAGCGGCGGTGGCAACGGAATTGGCAGTGATGATAGTGGC
GATGGCGGTGGTGGCGCTGGCAGCAGCGAGGTGCGGTATTTGGCGATTCC
GAAGGAGGCCACATGA
back to top