mRNA_P-wetherbeei_contig1093.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1093.1.1
Unique NamemRNA_P-wetherbeei_contig1093.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1093.1.1 vs. uniprot
Match: D8LQ11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ11_ECTSI)

HSP 1 Score: 428 bits (1100), Expect = 5.430e-145
Identity = 224/428 (52.34%), Postives = 277/428 (64.72%), Query Frame = 1
Query:   13 VLPVDAAVSRYSGQVDALGRTYKVSLKRRRPPGGGEPVVDLSSFRCDAELKSLMEAHRVMDLLRARLAQAHDVDAFMTELLDVLGRIGAAAPAPKPPPPEYYARLLSELD---WGVLVSVDDTLTRLQLRAADAAGREHILAVTLPPDYPAGPPACAVDLPRPLELGWAPGRSSLADAIAQFRAALAPYVPLWDALDDLDAHTWVLEPERPTRAHVHRRVAVAPHCSVMLRLDPLAPRAVPEIRFLGAESVIGPLRQNLNRGLAAWDHTSLPRRNLQRALGVEFPSPATTRREEYSADCGICYAHRLP--SARGDG---------------------------------------GNAAGSCSGSGGDKANGSEDVGAAPDLFCDNACCRRPYHPQCLLEWLQGLPTSRVSFDTVFGRCPYCSSPISV 1164
            +LP+D +   + G V+A+GR Y+VS+     P G   +VDL+SFRCD EL +L+EA  V D LRARLAQ  DV+ FM EL DVL ++  + P   PPP E+Y+RL+SE+D   W  LVS+D  LT +QLR  DAAGREH+ A++LP +YP  PP C+VDLP  L L W+PG+SSLA  + QFR AL P+  LW+ LDDLD HTWVLEPE+P+R+  HRRVAVA HCSVML++DP AP  VPE+RFLG+++VIGPLR+   R L  W+H+ L R NL+ AL ++ PSPATT + +YSADCGICYA+RL    A GD                                        G AA              ED GA PD  CDNA CRRPYHP+CL  WLQGLPTSRVSFDT+FG+CPYCS PISV
Sbjct:    5 ILPLDPSQRHFGGYVEAMGRQYRVSMAC---PQGRRGIVDLASFRCDPELSALLEARGVWDTLRARLAQTEDVEGFMAELTDVLEKVLRSCPKQDPPPAEFYSRLVSEIDAVGWSHLVSMDSLLTSVQLRERDAAGREHVFAISLPSNYPHSPPICSVDLPTHLNLRWSPGQSSLATVLEQFREALTPFHELWNVLDDLDKHTWVLEPEKPSRSTTHRRVAVARHCSVMLKIDPRAPGDVPEVRFLGSQAVIGPLREAYERNLFRWNHSLLVRANLEAALELKLPSPATTAKADYSADCGICYAYRLQRDDAAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXTRXXXXXXXXXXXGAAA--------------EDAGAIPDRVCDNAKCRRPYHPKCLFVWLQGLPTSRVSFDTIFGQCPYCSDPISV 415          
BLAST of mRNA_P-wetherbeei_contig1093.1.1 vs. uniprot
Match: A0A835YLD4_9STRA (WD-repeat region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD4_9STRA)

HSP 1 Score: 384 bits (986), Expect = 2.140e-128
Identity = 202/408 (49.51%), Postives = 256/408 (62.75%), Query Frame = 1
Query:   10 SVLPVDAAVSRYSGQVDALGRTYKVSLKRRRPPGGGEPVVDLSSFRCDAELKSLMEAHRVMDLLRARLAQAHDVDAFMTELLDVLGRIGAAAPAPKPPPPEYYARLLSELD---WGVLVSVDDTLTRLQLRAADAAGREHILAVTLPPDYPAGPPACAVDLPRPLELGWAPGRSSLADAIAQFRAALAPYVPLWDALDDLDAHTWVLEPERPTRAHVHRRVAVAPHCSVMLRLDPLAPRAVPEIRFLGAESVIGPLRQNLN-------------RGLAA-----WDHTSLPRRNLQRALGVEFPSPATTRREEYSADCGICYAHRLPSARGDGGNAAGSCSGSGGDKANGSEDVGAAPDLFCDNACCRRPYHPQCLLEWLQGLPTSRVSFDTVFGRCPYCSSPISVAT 1170
            ++LP +A  + Y G ++ALGR +++ ++ + P  GG+  VD  +F CDAEL  ++ +   +  LR RLAQ  D  +F+ EL DVL R+  AAP   P P  YY+RL++E+D   W  LV++ + L+ LQLR +DAAGR H++ VT+PPDYP   P C  DLP P  L W  G+SSLAD + QFRAALAP++PLW+ LDDLDAHT VLEPE  +RA   RRVA+APHCS+ L L+PLAPRA PE+RFLGA++ + P +  +                 AA     WD + L R NL+ ALG   PSPATT RE+ S DCGICY +RL  A G GG+   S               GA PD  CDNA CRRPYHP CLL WLQGLP SR SF T FG CPYCS  IS  +
Sbjct:   16 ALLPCNATCTEYCGFIEALGRQFRIKIRLKSP--GGQ--VDAEAFACDAELSQILTSAGALPALRLRLAQTPDPASFVAELQDVLQRLLRAAPQSAPAPAAYYSRLVAEIDKVGWEHLVTISERLSHLQLRVSDAAGRHHVIGVTMPPDYPRTAPTCVADLPAPFALQWRAGQSSLADVLGQFRAALAPFLPLWEVLDDLDAHTHVLEPEHRSRAIAQRRVALAPHCSLSLALNPLAPRAAPEVRFLGAQASLAPFKAAVRCAXXXXXXXXXXXXAFAANAPRTWDPSRLLRANLEAALGAPLPSPATTLREDISGDCGICYQYRLADASGGGGSGGSS---------------GAVPDRVCDNARCRRPYHPACLLAWLQGLPESRTSFGTTFGTCPYCSEDISATS 404          
BLAST of mRNA_P-wetherbeei_contig1093.1.1 vs. uniprot
Match: I0Z934_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z934_COCSC)

HSP 1 Score: 277 bits (708), Expect = 1.110e-86
Identity = 151/348 (43.39%), Postives = 203/348 (58.33%), Query Frame = 1
Query:  136 SSFRCDAELKSLMEAHRVMDLLRARLAQAHDVDAFMTELLDVLGRIGAAAPAPKPPPPEYYARLLSELD---WGVLVSVDDTLTRLQLRAADAAGREHILAVTLPPDYPAGPPACAVDLPRPLELG-WAPGRSSLADAIAQFRAALAPYVPLWDALDDLDAHTWVLEPERPTRAHVHRRVAVAPHCSVMLRLDPLAPRA-VPEIRFLGAESVIGPLRQNLNRGLAA-WDHTSLPRRNLQRALGVEFPSPATTRREEYSADCGICYAHRLPSARGDGGNAAGSCSGSGGDKANGSEDVGAAPDLFCDNACCRRPYHPQCLLEWLQGLPTSRVSFDTVFGRCPYCSSPIS 1161
            +   C  EL  L+E     D + ARL  + DV +F  EL ++L ++    P  +PPP  +Y  L++E+D   W  L  +   L+ L +R +DAAGR+H++ V LP  YP   P  +  LP  ++L  W PG SSL D I  + AA+A    LW  LDDLD   WVLEPE+PT A  HRR+A+  HCS++L LDP  PRA  P++RFLG+E+   P+R  L    A  WD   LPR NL+R L ++ P+ +T+ +++ S DC ICYA+RLP A+  G                GS  +G  PD  C N  C RP+H +CL EWL  LPTSR SF+TVFG CPYCS PI+
Sbjct:   54 AKLECSRELSDLLEGCE--DTIEARLGDSPDVTSFFLELRNLLDKLLRFRPPLEPPPSTFYTGLIAEIDAVGWDRLAWLCPNLSALHIRISDAAGRDHMVKVQLPAAYPEAAPLVSAQLPEQVKLPPWQPGASSLQDLIRHYEAAIASLQDLWACLDDLDREAWVLEPEKPTPADAHRRIALGGHCSLLLELDPARPRARPPDLRFLGSEAAAAPMRTRLRAADAPPWDPGRLPRENLERLLQMKLPTRSTSAQDDISGDCCICYAYRLPPAQPPGA---------------GSATLGEVPDQSCGNPRCARPFHGRCLREWLLALPTSRRSFNTVFGECPYCSQPIT 384          
BLAST of mRNA_P-wetherbeei_contig1093.1.1 vs. uniprot
Match: C3XZ04_BRAFL (Uncharacterized protein n=7 Tax=Branchiostoma TaxID=7737 RepID=C3XZ04_BRAFL)

HSP 1 Score: 270 bits (690), Expect = 2.250e-84
Identity = 147/389 (37.79%), Postives = 218/389 (56.04%), Query Frame = 1
Query:   13 VLPVDAAVSRYSGQVDALGRTYKVSLKRRRPPGGGEPVVDLSSFRCDAELKSLMEAHRVMDLLRARLAQAHDVDAFMTELLDVLGRIGAAAPAPKPPPPEYYARLLSELD---WGVLVSVDDTLTRLQLRAADAAGREHILAVTLPPDYPAGPPACAVDLPRPLELGWAPGRSSLADAIAQFRAALAPYVPLWDALDDLDAHTWVLEPERPTRAHVHRRVAVAPHCSVMLRLDPLAPRAVPEIRFLGAESVIGPLRQNLNRGLAAWD--HTSLPRRNLQRALGVEFPSPATTRREEYSADCGICYAHRLPSARGDGGNAAGSCSGSGGDKANGSEDVGAAPDLFCDNACCRRPYHPQCLLEWLQGLPTSRVSFDTVFGRCPYCSSPISV 1164
            +LP +   + Y G + A G+ Y++ ++         P  +L S R D + +  +      D+ + RL Q+ D+  F+ EL ++L +  +   +  PPP +Y+ +L+ E+D   W  LV +D +   LQ++  DA  REHIL + L   YP   P CA DLP  +   W+  + SL   + QF  ALA Y   WD +++LD  TWVLEPE+P+     RR+A+  + SV + +DP  PR +PE RFLGA+ VI P++Q+LN  L  WD   T LP  NLQ  LGV+FPSPA + +E+++  C ICYA+RL                         E++   PD  CD+  C RP+H  CL+EWL+ LP++R+SF+ +FG CPYCS PI+V
Sbjct:    2 LLPQNMQGTLYDGFITAGGKEYRLRIQL-------PPSKELKSARIDCDWRLQLVLQDKQDIFKQRLEQSPDLTTFLVELQNLLEQTSSQQSSVGPPP-QYFTQLVQEIDKLGWDRLVYIDPSFKSLQVQCRDACQREHILTINLHNQYPQMTPTCAADLPGKVNFKWSQ-QDSLQGVLHQFEKALAQYQDFWDNMEELDKSTWVLEPEKPSCKDTVRRIALGNNASVQITVDPAHPRMLPECRFLGADHVINPIKQSLNANLHCWDPRQTLLP--NLQNVLGVDFPSPANSSKEDFNMACSICYAYRL------------------------GEEI---PDRACDDPRCSRPFHATCLIEWLRALPSTRMSFNVIFGECPYCSKPITV 352          
BLAST of mRNA_P-wetherbeei_contig1093.1.1 vs. uniprot
Match: UPI00112EEF00 (E3 ubiquitin-protein ligase FANCL isoform X1 n=3 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112EEF00)

HSP 1 Score: 267 bits (682), Expect = 5.660e-83
Identity = 145/388 (37.37%), Postives = 219/388 (56.44%), Query Frame = 1
Query:   13 VLPVDAAVSRYSGQVDALGRTYKVSLKRRRPPGGGEPVVDLSSFRCDAELKSLMEAHRVMDLLRARLAQAHDVDAFMTELLDVL-GRIGAAAPAPKPPPPEYYARLLSELD---WGVLVSVDDTLTRLQLRAADAAGREHILAVTLPPDYPAGPPACAVDLPRPLELGWAPGRSSLADAIAQFRAALAPYVPLWDALDDLDAHTWVLEPERPTRAHVHRRVAVAPHCSVMLRLDPLAPRAVPEIRFLGAESVIGPLRQNLNRGLAAWDHTSLPRRNLQRALGVEFPSPATTRREEYSADCGICYAHRLPSARGDGGNAAGSCSGSGGDKANGSEDVGAAPDLFCDNACCRRPYHPQCLLEWLQGLPTSRVSFDTVFGRCPYCSSPISV 1164
            +LP +   + Y G + ALGR ++  L+   P    +  +  +  +C   LK+++  H    +++ RL  + D+ +FM EL  +L   +        PPPP+YY+ L+ +++   W  LV VD  L+ ++L+  D+AGREH++ + L  +YP  PP C VD P P E+ W P +SSL +   QF AAL      WD +D++D  TWVLEPE+PTR    RR+AV  + S+ + +DP  P+ +PE  FLGAE V+ PLR  LN  +  W+  S   +NL+  L ++FP+ A+T + ++S DCGICYA+RL +                             PD  CD+  C +P+H  CL EWL+GLP+SR SF+ +FG CPYCS PI++
Sbjct:   14 LLPQNKEKTIYDGFITALGRDFR--LRVFLP---SDFQLQNARLQCSVHLKNVL--HGYHQIVKQRLQHSCDLGSFMLELKTILEAALKNKRELNAPPPPQYYSCLVKDIENLGWDKLVFVDTELSTIRLKVEDSAGREHLITLHLKANYPLEPPDCFVDFPVPFEITWTP-KSSLINIRKQFLAALESMKEFWDVMDEIDEKTWVLEPEKPTRNATTRRIAVGNNVSINIDVDPRHPKMLPECYFLGAEHVVIPLRSKLNNNIHLWEPESNLLQNLKNVLEIDFPARASTEKSDFSMDCGICYAYRLDTT---------------------------VPDQVCDDPRCGQPFHQVCLYEWLRGLPSSRQSFNVIFGECPYCSKPITL 366          
BLAST of mRNA_P-wetherbeei_contig1093.1.1 vs. uniprot
Match: A0A7K5CBI5_MOTAL (FANCL ligase (Fragment) n=39 Tax=Neognathae TaxID=8825 RepID=A0A7K5CBI5_MOTAL)

HSP 1 Score: 262 bits (669), Expect = 3.110e-81
Identity = 148/387 (38.24%), Postives = 206/387 (53.23%), Query Frame = 1
Query:   13 VLPVDAAVSRYSGQVDALGRTYKVSLKRRRPPGGGEPVVDL----SSFRCDAELKSLMEAHRVMDLLRARLAQAHDVDAFMTELLDVLG-RIGAAAPAPKPPPPEYYARLLSELD---WGVLVSVDDTLTRLQLRAADAAGREHILAVTLPPDYPAGPPACAVDLPRPLELGWAPGRSSLADAIAQFRAALAPYVPLWDALDDLDAHTWVLEPERPTRAHVHRRVAVAPHCSVMLRLDPLAPRAVPEIRFLGAESVIGPLRQNLNRGLAAWDHTSLPRRNLQRALGVEFPSPATTRREEYSADCGICYAHRLPSARGDGGNAAGSCSGSGGDKANGSEDVGAAPDLFCDNACCRRPYHPQCLLEWLQGLPTSRVSFDTVFGRCPYCS 1149
            +LP D   + Y G V A GR + + +            VDL    +   C   LK ++  +R   +L+ RL    D+ +FM EL  VL   +        P PPEYY+ L+ +L+   W  +  VD  LT ++L+A D+ GR+H++ + L   YP  PP C VD P P  + W P ++SL D   QF AAL      WDALD++D  TWVLEPE PTR+   RR+A+  + SV + +DP  P  +PE  FLGA+  + PLR  LN  +  WD      +NL+  LG++FPS A   + +++ DCGICYA+RL                            G+APD  CD+  C +P+H  CL EWLQGLPTSR SF+ +FG CPYC+
Sbjct:    9 LLPQDRHGTAYEGFVTAQGRNFHIRILL---------PVDLQLKNARIECSWRLKKILHGYR--HILKQRLHSCPDLVSFMVELKTVLEIALKNTQDLHIPRPPEYYSCLVRDLEILGWNRVAYVDTGLTTVKLKAEDSCGRQHLITLKLNAKYPTEPPDCLVDFPVPFAVSWMP-QNSLIDIYNQFLAALESLKEFWDALDEIDGKTWVLEPENPTRSATTRRIAIGNNVSVNIEVDPRHPNMLPECYFLGADHEVNPLRTKLNNNMHLWDPEISLLQNLRELLGIDFPSRAVLEKSDFAKDCGICYAYRLD---------------------------GSAPDHVCDDPRCGQPFHQACLYEWLQGLPTSRQSFNVIFGECPYCN 356          
BLAST of mRNA_P-wetherbeei_contig1093.1.1 vs. uniprot
Match: A0A7L0YUA3_9PASE (FANCL ligase (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A7L0YUA3_9PASE)

HSP 1 Score: 262 bits (669), Expect = 3.850e-81
Identity = 148/387 (38.24%), Postives = 206/387 (53.23%), Query Frame = 1
Query:   13 VLPVDAAVSRYSGQVDALGRTYKVSLKRRRPPGGGEPVVDL----SSFRCDAELKSLMEAHRVMDLLRARLAQAHDVDAFMTELLDVLG-RIGAAAPAPKPPPPEYYARLLSELD---WGVLVSVDDTLTRLQLRAADAAGREHILAVTLPPDYPAGPPACAVDLPRPLELGWAPGRSSLADAIAQFRAALAPYVPLWDALDDLDAHTWVLEPERPTRAHVHRRVAVAPHCSVMLRLDPLAPRAVPEIRFLGAESVIGPLRQNLNRGLAAWDHTSLPRRNLQRALGVEFPSPATTRREEYSADCGICYAHRLPSARGDGGNAAGSCSGSGGDKANGSEDVGAAPDLFCDNACCRRPYHPQCLLEWLQGLPTSRVSFDTVFGRCPYCS 1149
            +LP D   + Y G V A GR + + +            VDL    +   C   LK ++  +R   +L+ RL    D+ +FM EL  VL   +        P PPEYY+ L+ +L+   W  +  VD  LT ++L+A D+ GR+H++ + L   YP  PP C VD P P  + W P ++SL D   QF AAL      WDALD++D  TWVLEPE PTR+   RR+A+  + SV + +DP  P  +PE  FLGA+  + PLR  LN  +  WD      +NL+  LG++FPS A   + +++ DCGICYA+RL                            G+APD  CD+  C +P+H  CL EWLQGLPTSR SF+ +FG CPYC+
Sbjct:   16 LLPQDRHGTAYEGFVTAQGRNFHIRILL---------PVDLQLKNARIECSWHLKRILHGYR--HILKQRLHSCPDLVSFMVELKTVLEIALKNTQDLHIPRPPEYYSCLVRDLEILGWNRVAYVDTGLTTVKLKAEDSCGRQHLITLMLNAKYPTEPPDCLVDFPVPFAVSWMP-QNSLIDIYNQFLAALESLKEFWDALDEIDGKTWVLEPENPTRSATTRRIAIGNNVSVNMEVDPRHPNMLPECYFLGADHEVNPLRTKLNNNMHLWDPEISLLQNLRELLGIDFPSRAVLEKSDFAKDCGICYAYRLD---------------------------GSAPDQVCDDPRCGQPFHQACLYEWLQGLPTSRQSFNVIFGECPYCN 363          
BLAST of mRNA_P-wetherbeei_contig1093.1.1 vs. uniprot
Match: L8HG57_ACACA (Fanconi anemia, complementation group L family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HG57_ACACA)

HSP 1 Score: 262 bits (669), Expect = 4.210e-81
Identity = 154/384 (40.10%), Postives = 207/384 (53.91%), Query Frame = 1
Query:   64 LGRTYKVSLKRRRPPGGGEPVVDLSS-FRCDAELKSLMEAHRVMDLLRARLAQAHDVDAFMTELLDVLGRI---------GAAAPAPKPPPPEYYARLLSELD---WGVLVSVDDTLTRLQLRAADAAGREHILAVTLPPDYPAGPPACAVDLPRPLELGWAPGR-SSLADAIAQFRAALAPYVPLWDALDDLDAHTWVLEPERPTRAHVHRRVAVAPHCSVMLRLDPLAPRAVPEIRFLGAESVIGPLRQNLNRGLAAWDHTSLPRRNLQRALGVEFPSP-ATTRREEYSADCGICYAHRLPSARGDGGNAAGSCSGSGGDKANGSEDVGAAPDLFCDNACCRRPYHPQCLLEWLQGLPTSRVSFDTVFGRCPYCSSPISVAT 1170
            LG  + V+++R   P G E + D ++  RC   L+  +  HR    LR RLA+++D  +F+ E+ DVL +             +    P    +Y+R+++E+D   W  LVS +D+LTRL LR  D AGREH L V L PD+P   P C  DLP+ L L W P + S+LAD + QF  AL  Y  LW  L+D+D HTWVLEPERPT A   RR+A+  HCS+ + +D  AP +VP+ RFLG+E+ +  LR+NLN  L  WD       NL R LG E P   A    +  S  CGICYA R                             G  P + C  A C + +H  CL+EWL+ LP++R SF T+FG CPYCS+ I V T
Sbjct:   14 LGTEWAVAVER---PRGTERMGDAAARVRCSPALRRRLAPHRAA--LRHRLAESNDAHSFLVEVADVLSKTTXXXXXXXXXVRSGGVPPRGGGFYSRVVAEIDAVGWSKLVSANDSLTRLSLRTTDEAGREHRLEVELMPDHPRTAPVCTTDLPQALALRWDPAQPSTLADVVRQFEEALRGYQALWAVLEDIDRHTWVLEPERPTLATSIRRIALGNHCSLQVVIDAAAPASVPQCRFLGSETRVAALRENLNANLDLWDEGQALHVNLGRVLGCELPGKEAAATGDRASIGCGICYALRFK---------------------------GDIPTVLCSLASCNKAFHEACLVEWLRVLPSTRQSFGTLFGTCPYCSTQIVVKT 365          
BLAST of mRNA_P-wetherbeei_contig1093.1.1 vs. uniprot
Match: A0A6J0HRY2_9PASS (E3 ubiquitin-protein ligase FANCL isoform X1 n=1 Tax=Lepidothrix coronata TaxID=321398 RepID=A0A6J0HRY2_9PASS)

HSP 1 Score: 261 bits (668), Expect = 7.130e-81
Identity = 146/388 (37.63%), Postives = 206/388 (53.09%), Query Frame = 1
Query:   13 VLPVDAAVSRYSGQVDALGRTYKVSLKRRRPPGGGEPVVDLSSFRCDAELKSLMEAHRVMDLLRARLAQAHDVDAFMTELLDVLG-RIGAAAPAPKPPPPEYYARLLSELD---WGVLVSVDDTLTRLQLRAADAAGREHILAVTLPPDYPAGPPACAVDLPRPLELGWAPGRSSLADAIAQFRAALAPYVPLWDALDDLDAHTWVLEPERPTRAHVHRRVAVAPHCSVMLRLDPLAPRAVPEIRFLGAESVIGPLRQNLNRGLAAWDHTSLPRRNLQRALGVEFPSPATTRREEYSADCGICYAHRLPSARGDGGNAAGSCSGSGGDKANGSEDVGAAPDLFCDNACCRRPYHPQCLLEWLQGLPTSRVSFDTVFGRCPYCSSPISV 1164
            +LP +   + Y G V A GR + + +         +  +  +   C   LK ++  HR   +L+ RL    D+ +FM EL  VL   +        P PPEYY+ L+ +L+   W  +  VD  LT ++L+A D+ GR+H++ + L   YP  PP C VD P    + W P ++SL D   QF AAL      WDALD++D  TWVLEPE PTR+   RR+A+  + SV + +DP  P  +PE  FLGA+  + PLR  LN  +  WD      +NL+  L +EFPS A   + +++ DCGICYA+RL                            GAAPD  CD   C +P+H  CL EWLQGLPTSR SF+ +FG CPYC+ P+++
Sbjct:   14 LLPQNRWGTAYEGFVTAQGRDFHIRVLLPE-----DLQLKNARIECSWSLKKIL--HRYQHILKQRLHSCPDLVSFMVELRTVLEIALKNTQDLHVPRPPEYYSCLVRDLEILGWNKVAYVDTGLTTVRLKAEDSCGRQHLITLKLNAKYPTEPPDCLVDFPVQFAISWMP-QNSLLDIYNQFLAALESLKEFWDALDEIDGKTWVLEPENPTRSATARRIAIGNNVSVNVEVDPRHPNMLPECYFLGADHAVAPLRTKLNNNMHLWDPEISLLQNLKDLLEIEFPSRAVLEKSDFAKDCGICYAYRLD---------------------------GAAPDQVCDEPRCGQPFHQACLYEWLQGLPTSRQSFNVIFGECPYCNKPLTL 366          
BLAST of mRNA_P-wetherbeei_contig1093.1.1 vs. uniprot
Match: A0A2P6V2I1_9CHLO (E3 ubiquitin-ligase FANCL n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V2I1_9CHLO)

HSP 1 Score: 262 bits (670), Expect = 7.950e-81
Identity = 164/408 (40.20%), Postives = 220/408 (53.92%), Query Frame = 1
Query:   28 AAVSRYSGQVDALGRTYKVSLKRRRPPGGGEPV-------------VDLSSFRCDA--ELKSLMEA-----HRVMDLLRARLAQAHDVDAFMTEL---LDVLGRIGAAAPAPKPP--PPEYYARLLSELD---WGVLVSVDDTLTRLQLRAADAAGREHILAVTLPPDYPAGPPACAVDLPRPLELGWAPGRSSLADAIAQFRAALAPYVPLWDALDDLDAHTWVLEPERPTRAHVHRRVAVAPHCSVMLRLDPLAPRAVP-EIRFLGAESVIGPLRQNLNRGLAAWDHTSLPRRNLQRALGVEFPSPATTRREEYSADCGICYAHRLPSARGDGGNAAGSCSGSGGDKANGSEDVGAAPDLFCDNACCRRPYHPQCLLEWLQGLPTSRVSFDTVFGRCPYCSSPISV 1164
            AAV+      DA+G TY+  +        G P                L+  R +   EL +L+       H  + L + RLA++  + AF  EL   +D L    AA PA      P  +Y+ L  EL+   W  + ++   L+ + L A DAAGR H L ++LPP YPA  P  A DLP PLEL W  G +SLA  +AQF AALA + PLWD+LDDLDAH WV+EP  P+R  +HRR+A+  H S+ L LDP AP A+P + RF+G++  + PLRQ L+     W      R NL+  L +  P       EE SADC ICYA+RL  A G                  G+ + G APD+ CDNA C +P+H +CL+EWL    T+R SF+T+FG CPYCS+PI+V
Sbjct:   10 AAVAPLLLPCDAIGSTYEGYVLSNAQRAAGLPASLWLRISGLCVGAASLAGARLEVGPELAALLGGXXXXXHGSVSLAQ-RLAESPSLAAFCVELQNMVDQLSLESAATPAAPSATRPAAFYSGLRGELEALGWQRVAALSPDLSAVTLAAVDAAGRRHELRLSLPPGYPAAQPTPAADLPAPLELRWGAG-ASLATCLAQFEAALAQHQPLWDSLDDLDAHAWVIEPSAPSRGALHRRIALGSHVSLALTLDPAAPGALPNDCRFMGSDRAVAPLRQRLHDNRGLWQEGRPLRGNLEAVLQLALPQRQGEDAEEASADCAICYAYRLLPAEG------------------GAAEDGEAPDVNCDNAACGKPFHRRCLVEWLNSDQTTRQSFNTLFGACPYCSAPITV 397          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1093.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ11_ECTSI5.430e-14552.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YLD4_9STRA2.140e-12849.51WD-repeat region-domain-containing protein n=1 Tax... [more]
I0Z934_COCSC1.110e-8643.39Uncharacterized protein n=1 Tax=Coccomyxa subellip... [more]
C3XZ04_BRAFL2.250e-8437.79Uncharacterized protein n=7 Tax=Branchiostoma TaxI... [more]
UPI00112EEF005.660e-8337.37E3 ubiquitin-protein ligase FANCL isoform X1 n=3 T... [more]
A0A7K5CBI5_MOTAL3.110e-8138.24FANCL ligase (Fragment) n=39 Tax=Neognathae TaxID=... [more]
A0A7L0YUA3_9PASE3.850e-8138.24FANCL ligase (Fragment) n=3 Tax=Passeriformes TaxI... [more]
L8HG57_ACACA4.210e-8140.10Fanconi anemia, complementation group L family pro... [more]
A0A6J0HRY2_9PASS7.130e-8137.63E3 ubiquitin-protein ligase FANCL isoform X1 n=1 T... [more]
A0A2P6V2I1_9CHLO7.950e-8140.20E3 ubiquitin-ligase FANCL n=1 Tax=Micractinium con... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1093contigP-wetherbeei_contig1093:1132..2310 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LQ11
Preferred nameFANCL
PFAMsFANCL_C,WD-3
Model size1179
Max annot lvl2759|Eukaryota
KEGG koko:K10606,ko:K17426
KEGG Pathwayko03460,ko04120,map03460,map04120
KEGG ModuleM00413
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006464,GO:0006513,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007276,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0016567,GO:0016604,GO:0016740,GO:0019538,GO:0019787,GO:0019899,GO:0019953,GO:0022414,GO:0031625,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032446,GO:0032501,GO:0032504,GO:0032991,GO:0033554,GO:0034641,GO:0036211,GO:0036297,GO:0042127,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043240,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0046483,GO:0048609,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051716,GO:0061630,GO:0061659,GO:0065007,GO:0070013,GO:0070647,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564
Exons1
Evalue8.9e-146
EggNOG OGsKOG3268@1|root,KOG3268@2759|Eukaryota
Ec32 ortholog descriptionFanconi anemia complex, subunit FancL, WD-repeat containing domain
Ec32 orthologEc-15_001360.1
EC2.3.2.27
Descriptionprotein monoubiquitination
Cds size1179
COG categoryS
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03400,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185890.552836-CDS-P-wetherbeei_contig1093:1131..23101683185890.552836-CDS-P-wetherbeei_contig1093:1131..2310Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1093 1132..2310 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1093.1.1prot_P-wetherbeei_contig1093.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1093 1132..2310 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1093.1.1

>prot_P-wetherbeei_contig1093.1.1 ID=prot_P-wetherbeei_contig1093.1.1|Name=mRNA_P-wetherbeei_contig1093.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=393bp
MRYSVLPVDAAVSRYSGQVDALGRTYKVSLKRRRPPGGGEPVVDLSSFRC
DAELKSLMEAHRVMDLLRARLAQAHDVDAFMTELLDVLGRIGAAAPAPKP
PPPEYYARLLSELDWGVLVSVDDTLTRLQLRAADAAGREHILAVTLPPDY
PAGPPACAVDLPRPLELGWAPGRSSLADAIAQFRAALAPYVPLWDALDDL
DAHTWVLEPERPTRAHVHRRVAVAPHCSVMLRLDPLAPRAVPEIRFLGAE
SVIGPLRQNLNRGLAAWDHTSLPRRNLQRALGVEFPSPATTRREEYSADC
GICYAHRLPSARGDGGNAAGSCSGSGGDKANGSEDVGAAPDLFCDNACCR
RPYHPQCLLEWLQGLPTSRVSFDTVFGRCPYCSSPISVATIR*
back to top

mRNA from alignment at P-wetherbeei_contig1093:1132..2310-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1093.1.1 ID=mRNA_P-wetherbeei_contig1093.1.1|Name=mRNA_P-wetherbeei_contig1093.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1179bp|location=Sequence derived from alignment at P-wetherbeei_contig1093:1132..2310- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCTACTCCGTGCTGCCCGTGGATGCGGCGGTGTCGCGCTACAGCGG CCAGGTCGACGCGCTGGGCCGCACCTACAAAGTATCTTTGAAGCGACGAC GCCCTCCCGGCGGCGGCGAGCCCGTCGTCGACCTGAGCTCGTTCCGCTGC GACGCCGAGCTCAAGAGTCTGATGGAGGCGCACCGCGTCATGGACCTGCT GCGGGCGCGCCTGGCGCAGGCGCATGACGTGGACGCCTTCATGACGGAGC TCCTCGACGTCTTAGGACGCATCGGCGCAGCCGCGCCGGCGCCGAAGCCG CCTCCTCCCGAGTACTACGCGCGTCTTCTTTCAGAGCTCGACTGGGGCGT GCTCGTCTCTGTGGATGACACACTCACTCGCCTCCAGCTGCGCGCCGCTG ATGCCGCGGGCCGCGAGCACATCCTCGCCGTGACGCTGCCGCCCGACTAT CCCGCGGGGCCGCCCGCCTGCGCCGTCGATCTTCCGCGCCCGCTGGAGCT CGGCTGGGCGCCCGGTCGTTCGTCCCTTGCCGACGCGATCGCCCAGTTCC GGGCAGCTCTCGCGCCGTACGTCCCGCTGTGGGACGCGCTGGACGACCTG GACGCCCACACGTGGGTGCTGGAGCCGGAGCGGCCGACGCGCGCGCATGT GCACCGGCGAGTGGCCGTGGCGCCGCACTGCTCGGTGATGCTGCGGCTGG ACCCGCTCGCGCCGCGGGCCGTGCCCGAGATTCGCTTCCTGGGCGCGGAG TCCGTCATCGGGCCGCTGCGGCAGAACTTAAACAGGGGCTTGGCGGCTTG GGACCACACCAGCCTGCCGAGGCGCAACCTGCAGCGTGCGCTGGGCGTCG AGTTTCCGTCGCCGGCGACTACGCGCCGCGAGGAGTACAGCGCCGACTGC GGCATCTGCTACGCCCACCGCCTGCCGTCCGCTCGCGGAGATGGCGGCAA CGCGGCCGGGAGTTGCAGTGGCAGCGGCGGGGACAAAGCAAATGGGAGCG AGGACGTCGGGGCGGCGCCAGATCTGTTCTGCGACAACGCGTGCTGCCGG CGGCCGTACCACCCGCAGTGCCTGCTCGAGTGGCTGCAAGGATTGCCGAC TAGCCGCGTCAGCTTCGACACCGTCTTCGGGCGATGCCCCTACTGCAGCT CCCCCATCAGCGTCGCCACCATCCGGTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1093:1132..2310-

>mRNA_P-wetherbeei_contig1093.1.1 ID=mRNA_P-wetherbeei_contig1093.1.1|Name=mRNA_P-wetherbeei_contig1093.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1179bp|location=Sequence derived from alignment at P-wetherbeei_contig1093:1132..2310- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCTACTCCGTGCTGCCCGTGGATGCGGCGGTGTCGCGCTACAGCGG
CCAGGTCGACGCGCTGGGCCGCACCTACAAAGTATCTTTGAAGCGACGAC
GCCCTCCCGGCGGCGGCGAGCCCGTCGTCGACCTGAGCTCGTTCCGCTGC
GACGCCGAGCTCAAGAGTCTGATGGAGGCGCACCGCGTCATGGACCTGCT
GCGGGCGCGCCTGGCGCAGGCGCATGACGTGGACGCCTTCATGACGGAGC
TCCTCGACGTCTTAGGACGCATCGGCGCAGCCGCGCCGGCGCCGAAGCCG
CCTCCTCCCGAGTACTACGCGCGTCTTCTTTCAGAGCTCGACTGGGGCGT
GCTCGTCTCTGTGGATGACACACTCACTCGCCTCCAGCTGCGCGCCGCTG
ATGCCGCGGGCCGCGAGCACATCCTCGCCGTGACGCTGCCGCCCGACTAT
CCCGCGGGGCCGCCCGCCTGCGCCGTCGATCTTCCGCGCCCGCTGGAGCT
CGGCTGGGCGCCCGGTCGTTCGTCCCTTGCCGACGCGATCGCCCAGTTCC
GGGCAGCTCTCGCGCCGTACGTCCCGCTGTGGGACGCGCTGGACGACCTG
GACGCCCACACGTGGGTGCTGGAGCCGGAGCGGCCGACGCGCGCGCATGT
GCACCGGCGAGTGGCCGTGGCGCCGCACTGCTCGGTGATGCTGCGGCTGG
ACCCGCTCGCGCCGCGGGCCGTGCCCGAGATTCGCTTCCTGGGCGCGGAG
TCCGTCATCGGGCCGCTGCGGCAGAACTTAAACAGGGGCTTGGCGGCTTG
GGACCACACCAGCCTGCCGAGGCGCAACCTGCAGCGTGCGCTGGGCGTCG
AGTTTCCGTCGCCGGCGACTACGCGCCGCGAGGAGTACAGCGCCGACTGC
GGCATCTGCTACGCCCACCGCCTGCCGTCCGCTCGCGGAGATGGCGGCAA
CGCGGCCGGGAGTTGCAGTGGCAGCGGCGGGGACAAAGCAAATGGGAGCG
AGGACGTCGGGGCGGCGCCAGATCTGTTCTGCGACAACGCGTGCTGCCGG
CGGCCGTACCACCCGCAGTGCCTGCTCGAGTGGCTGCAAGGATTGCCGAC
TAGCCGCGTCAGCTTCGACACCGTCTTCGGGCGATGCCCCTACTGCAGCT
CCCCCATCAGCGTCGCCACCATCCGGTGA
back to top