mRNA_P-wetherbeei_contig10875.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10875.1.1 vs. uniprot
Match: D8LKC4_ECTSI (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKC4_ECTSI) HSP 1 Score: 144 bits (363), Expect = 3.600e-37 Identity = 72/138 (52.17%), Postives = 97/138 (70.29%), Query Frame = 1 Query: 43 RKPQKAMTAAEQRFMTKALDVWKKINAHKYAIIFRKPVSAKDAPGYDEVVHEPMDLSLIKKRIDDGAIASLEELARCAVVMCTNAMVFNGAGSEYYDYAKELRDFAREKIEEASVPGS-DPDPFMENIVVGARVARGR 453 RK ++A + F AL+VW ++ HK+AIIFRK V+ KDAPGY+E++ EPMDLSLI++RI GA+ SL++++R VMC NAMVFNG Y+DY+KELR +A E IEEA PG DP +++V GAR +R R Sbjct: 284 RKKERADSVDAAHFRRIALEVWDRVYRHKFAIIFRKAVNPKDAPGYEEIIKEPMDLSLIRERIMSGALLSLDDMSRDLCVMCNNAMVFNGKDDPYFDYSKELRTYANEVIEEARRPGFVTADPGFDSVVAGARTSRAR 421
BLAST of mRNA_P-wetherbeei_contig10875.1.1 vs. uniprot
Match: A0A7S2ZZ61_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZZ61_9RHOD) HSP 1 Score: 89.0 bits (219), Expect = 2.360e-17 Identity = 39/84 (46.43%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 100 DVWKKINAHKYAIIFRKPVSAKDAPGYDEVVHEPMDLSLIKKRIDDGAIASLEELARCAVVMCTNAMVFNGAGSEYYDYAKELR 351 DVW++I+ HKYAI FRKPV + DAP Y +V+ PMDLS +KK +D+G + + + +++C+NA+ FN GS+ + A+ELR Sbjct: 463 DVWREISNHKYAIPFRKPVKSSDAPNYYDVIRRPMDLSTVKKMLDEGKFMNPSDFQKEMLLICSNAIQFNPRGSDIEEIARELR 546
BLAST of mRNA_P-wetherbeei_contig10875.1.1 vs. uniprot
Match: A0A0D2VKM9_CAPO3 (Brd8 protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VKM9_CAPO3) HSP 1 Score: 86.3 bits (212), Expect = 1.820e-16 Identity = 40/90 (44.44%), Postives = 59/90 (65.56%), Query Frame = 1 Query: 103 VWKKINAHKYAIIFRKPVSAKDAPGYDEVVHEPMDLSLIKKRIDDGAIASLEELARCAVVMCTNAMVFNGAGSEYYDYAKELRDFAREKI 372 VW+ I+ H+YA +F +PV+ + PGY V+ PMDL+ I+KRIDDG I S + R +M NA+++N A + Y A E+R+ ARE+I Sbjct: 370 VWRNISNHRYANVFLRPVTDDEVPGYSSVIKRPMDLTTIRKRIDDGTIRSTRDFLRDIYLMFANALMYNDADHDVYLMAVEMRNDAREQI 459
BLAST of mRNA_P-wetherbeei_contig10875.1.1 vs. uniprot
Match: A0A8J4PW68_9MYCE (Bromo domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PW68_9MYCE) HSP 1 Score: 82.8 bits (203), Expect = 2.410e-15 Identity = 38/109 (34.86%), Postives = 69/109 (63.30%), Query Frame = 1 Query: 52 QKAMTAAEQRFMTKALD-VWKKINAHKYAIIFRKPVSAKDAPGYDEVVHEPMDLSLIKKRIDDGAIASLEELARCAVVMCTNAMVFNGAGSEYYDYAKELRDFAREKIE 375 +K A +R + A+ VWK +N+H++A IFR P++ +DAP YD+V+ + MDL+ +KK +DDG ++ E +++ NAM +N SE ++ A ++ +A +++E Sbjct: 186 KKKEEANNKRVLIGAMSKVWKSLNSHRFAYIFRYPITHEDAPDYDQVIKKRMDLTTLKKNLDDGLYHNVTEFKNEIILIFNNAMQYNAEHSEIFNMANSMKKYAEKELE 294
BLAST of mRNA_P-wetherbeei_contig10875.1.1 vs. uniprot
Match: UPI00077AEF1F (bromodomain-containing protein 8-like isoform X1 n=10 Tax=Acropora TaxID=6127 RepID=UPI00077AEF1F) HSP 1 Score: 83.2 bits (204), Expect = 2.500e-15 Identity = 48/132 (36.36%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 70 AEQRFMTKALDVWKKINAHKYAIIFRKPVSAKDAPGYDEVVHEPMDLSLIKKRIDDGAIASLEELARCAVVMCTNAMVFNGAGSEYYDYAKELRDFAREKIEEASVPGSDPDPFMENIVVGARVARG-RTDG 462 A++ + + VW+ HKYA +F PV+ +APGY VV PMDLS IKK I++G I + E R ++M NA+++N A + Y A+E+RD E+I+ I+V +++ RG R DG Sbjct: 767 AQKTWKKSIMLVWRAAANHKYANVFLHPVTDDEAPGYHSVVFRPMDLSTIKKNIENGTIRTTSEFQRDMMLMFQNALMYNSADHDVYRMAEEMRDDVMEQIQSY---------IATQIMVDSKMLRGHRQDG 889
BLAST of mRNA_P-wetherbeei_contig10875.1.1 vs. uniprot
Match: A0A151ZF58_9MYCE (Bromodomain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZF58_9MYCE) HSP 1 Score: 80.9 bits (198), Expect = 1.050e-14 Identity = 34/93 (36.56%), Postives = 62/93 (66.67%), Query Frame = 1 Query: 97 LDVWKKINAHKYAIIFRKPVSAKDAPGYDEVVHEPMDLSLIKKRIDDGAIASLEELARCAVVMCTNAMVFNGAGSEYYDYAKELRDFAREKIE 375 L +WK +N H++A +F+ P++ +AP YD+V+ MDLS +KK ++DG ++L+E + V++ NAM +N S+ Y A+ ++ FA +++E Sbjct: 169 LKIWKTLNGHRHAYVFKYPITHDEAPDYDKVIKHRMDLSKLKKNVEDGVYSTLQEFHKDVVLIFKNAMEYNEEKSDIYLMAETMKKFAEKELE 261
BLAST of mRNA_P-wetherbeei_contig10875.1.1 vs. uniprot
Match: UPI00109B764C (bromodomain-containing protein 8 isoform X1 n=3 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109B764C) HSP 1 Score: 80.1 bits (196), Expect = 1.470e-14 Identity = 38/102 (37.25%), Postives = 63/102 (61.76%), Query Frame = 1 Query: 70 AEQRFMTKALDVWKKINAHKYAIIFRKPVSAKDAPGYDEVVHEPMDLSLIKKRIDDGAIASLEELARCAVVMCTNAMVFNGAGSEYYDYAKELRDFAREKIE 375 A++ + + VW+ HKYA +F PV+ +APGY +V PMDL+ IKK I++G+I + E R ++M NA+++N A + Y A+E+RD ++I+ Sbjct: 203 AQKNWKKSIMLVWRAAANHKYANVFLHPVTDDEAPGYHGIVFRPMDLTTIKKNIENGSIRTTSEFQRDMMLMFQNALMYNNADHDVYRMAEEMRDDVMDQIQ 304
BLAST of mRNA_P-wetherbeei_contig10875.1.1 vs. uniprot
Match: A0A2W1B266_HELAM (Bromo domain-containing protein (Fragment) n=1 Tax=Helicoverpa armigera TaxID=29058 RepID=A0A2W1B266_HELAM) HSP 1 Score: 76.6 bits (187), Expect = 1.720e-14 Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 1 Query: 121 AHKYAIIFRKPVSAKDAPGYDEVVHEPMDLSLIKKRIDDGAIASLEELARCAVVMCTNAMVFNGAGSEYYDYAKEL 348 AHKYA +F +P+S +APGY VV PMDLS I++ ID+G I + E+ R ++M +NA+++N + Y AKE+ Sbjct: 3 AHKYASLFLRPISDDEAPGYSMVVKRPMDLSTIRRNIDNGVIRTTEQFQRDVLLMLSNALMYNSSEHSVYTMAKEM 78
BLAST of mRNA_P-wetherbeei_contig10875.1.1 vs. uniprot
Match: A0A6V2FV78_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2FV78_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.730e-14 Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 97 LDVWKKINAHKYAIIFRKPVSAKDAPGYDEVVHEPMDLSLIKKRIDDGAIASLEELARCAVVMCTNAMVFNGAGSEYYDYAKELRDFAREKIEEASVPGSD 399 L +WK+I++H+ A +FRKPV+A++APGY + + PMDLSLI++ I G I S +L ++C N + FNG S+Y +E F + I A S+ Sbjct: 318 LSLWKRISSHRTATVFRKPVNAREAPGYSDRIIFPMDLSLIRRMITTGMIVSYADLHERIGLICHNCVKFNGRESDYGLVTREFESFVDDTIVTAVTTASE 418
BLAST of mRNA_P-wetherbeei_contig10875.1.1 vs. uniprot
Match: A0A2B4RYS1_STYPI (Tetratricopeptide repeat protein 28 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RYS1_STYPI) HSP 1 Score: 79.7 bits (195), Expect = 4.300e-14 Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = 1 Query: 70 AEQRFMTKALDVWKKINAHKYAIIFRKPVSAKDAPGYDEVVHEPMDLSLIKKRIDDGAIASLEELARCAVVMCTNAMVFNGAGSEYYDYAKELRDFAREKIE 375 A++ + + VW+ HKYA +F PV+ +APGY +V PMDLS IKK I++G I + E R ++M NA+++N A + Y A+E+ D E+I+ Sbjct: 867 AQKTWKKSIMLVWRAAANHKYANVFLHPVTDDEAPGYHSIVFRPMDLSTIKKNIENGTIRTTSEFQRDMMLMFQNALMYNSADHDVYRMAEEMGDDVMEQIQ 968 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10875.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10875.1.1 >prot_P-wetherbeei_contig10875.1.1 ID=prot_P-wetherbeei_contig10875.1.1|Name=mRNA_P-wetherbeei_contig10875.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=178bp GSGGGGGRGGRSARRKPQKAMTAAEQRFMTKALDVWKKINAHKYAIIFRKback to top mRNA from alignment at P-wetherbeei_contig10875:47..1062- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10875.1.1 ID=mRNA_P-wetherbeei_contig10875.1.1|Name=mRNA_P-wetherbeei_contig10875.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1016bp|location=Sequence derived from alignment at P-wetherbeei_contig10875:47..1062- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10875:47..1062- >mRNA_P-wetherbeei_contig10875.1.1 ID=mRNA_P-wetherbeei_contig10875.1.1|Name=mRNA_P-wetherbeei_contig10875.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig10875:47..1062- (Phaeothamnion wetherbeei SAG_119_79)back to top |