mRNA_P-wetherbeei_contig1086.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1086.2.1
Unique NamemRNA_P-wetherbeei_contig1086.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1086.2.1 vs. uniprot
Match: A0A3C0TVP3_9PROT (Pseudouridine synthase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TVP3_9PROT)

HSP 1 Score: 422 bits (1086), Expect = 1.060e-145
Identity = 210/330 (63.64%), Postives = 264/330 (80.00%), Query Frame = 1
Query:    1 MGTPIKESNYTLTVTATEAGNRLDKWLSAHIAELSRSRLQALLATGMVTRNGRTIDDASYRVKPGDCFTVHIPALVEAIPQAEAIPLHVVYEDADVIVIDKPAGMVVHPAAGNWQGTLVHALLAHCGDSLSGIGGVRRPGIVHRLDKLTSGLLAVAKTDRAHAALAAQFAAHSVQRSYLALVWGIPRPSAGRIVTQIGRSPANRQKMAVRSSGGREAITNYETLASYGTPGNPVISLIQCRLETGRTHQIRVHLTHIGHPIVGDPVYGGG-LKKAKVLPDDAQNAVTQLRRQALHAISLGFVHP-GGQPLFFESALPPDMAELVHILEKM 984
            M  P++E+  +LTV   E G RLDKWLS  IA+LSR+R+Q+LLA G ++ +GR ID+ASYRVK G+ F + IPA V+A+ + E IPL+++YED D+IVIDKPAG+VVHP AGNWQGTLVHALLAHCG SLSGIGGV+RPGIVHRLDKLTSGLL  AKT RAH  LAAQFA HSV RSYLALVWG P+P+ GR+V+QIGRSP+NRQKMAVR +GG++AITNYETL S+G P  P +SL++CRLETGRTHQIRVHL H G+P++GDPVYGG    + K+LP + +  +  L RQALHA  LGF+HP   + ++FES LP +++ L+ +L ++
Sbjct:    1 MNHPVEETLISLTVGDAEGGARLDKWLSEKIADLSRARIQSLLADGQISLDGRKIDEASYRVKSGERFHICIPAPVDAVIRPENIPLNIIYEDEDLIVIDKPAGLVVHPGAGNWQGTLVHALLAHCGASLSGIGGVKRPGIVHRLDKLTSGLLVAAKTGRAHEILAAQFAEHSVTRSYLALVWGAPKPAKGRLVSQIGRSPSNRQKMAVRPNGGKQAITNYETLQSFGNPLRPAVSLVRCRLETGRTHQIRVHLAHQGNPVIGDPVYGGNPAGREKLLPHELRKVIGGLGRQALHAAILGFIHPVRNEEMYFESPLPEEISRLLPLLGQI 330          
BLAST of mRNA_P-wetherbeei_contig1086.2.1 vs. uniprot
Match: A0A352K9U0_9PROT (Pseudouridine synthase n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352K9U0_9PROT)

HSP 1 Score: 383 bits (983), Expect = 5.210e-130
Identity = 199/318 (62.58%), Postives = 237/318 (74.53%), Query Frame = 1
Query:   34 LTVTATEAGNRLDKWLSAHIAELSRSRLQALLATGMVTRNGRTIDDASYRVKPGDCFTVHIPALVEAIPQAEAIPLHVVYEDADVIVIDKPAGMVVHPAAGNWQGTLVHALLAHCGDSLSGIGGVRRPGIVHRLDKLTSGLLAVAKTDRAHAALAAQFAAHSVQRSYLALVWGIPRPSAGRIVTQIGRSPANRQKMAVRSSGGREAITNYETLASYGTPGNPVISLIQCRLETGRTHQIRVHLTHIGHPIVGDPVYGGGLKKAKVLPDDAQNAVTQLRRQALHAISLGFVHP-GGQPLFFESALPPDMAELVHILEKM 984
            +TV  + AG+RLDKWL+  I +LSR+R+Q+LL  G VTR+G TI+D SYRVKP + F V IPA VEA PQ + I L + YEDA +IVIDKPAG+VVHP AGN +GTLV+ALL HCGDSLSGIGG++RPGIVHRLDK TSGLL VAKTD AH ALAAQF  HSV+R Y ALVWG P+ +  RI TQ+GRS  NRQKM V    G+ AITNY     YG P +P+ + + CRLETGRTHQIRVH+ HIGHPI+GDPVYG    K K LPD     + +L RQALHA  LGF+HP  G+ L FESALP D+ ELV+  E++
Sbjct:   16 VTVDESAAGDRLDKWLARMIPQLSRARIQSLLHEGNVTRDGGTIEDPSYRVKPAESFCVDIPAPVEATPQPQQIALDIRYEDAALIVIDKPAGLVVHPGAGNSEGTLVNALLHHCGDSLSGIGGIKRPGIVHRLDKDTSGLLVVAKTDLAHQALAAQFEEHSVERRYQALVWGAPQHAEDRIETQLGRSRYNRQKMTVLRQNGKHAITNYRCTDYYGPPASPLATRVACRLETGRTHQIRVHMAHIGHPIIGDPVYGQARIKRKQLPDALNALIDRLGRQALHAAVLGFIHPESGRKLRFESALPHDLHELVNSFEQL 333          
BLAST of mRNA_P-wetherbeei_contig1086.2.1 vs. uniprot
Match: A0A2H6J111_9BACT (Pseudouridine synthase n=1 Tax=bacterium BMS3Bbin10 TaxID=2005733 RepID=A0A2H6J111_9BACT)

HSP 1 Score: 365 bits (938), Expect = 4.040e-123
Identity = 183/329 (55.62%), Postives = 242/329 (73.56%), Query Frame = 1
Query:   16 KESNYTLTVTATEAGNRLDKWLSAHIAELSRSRLQALLATGMVTRNGRTIDDASYRVKPGDCFTVHIPALVEAIPQAEAIPLHVVYEDADVIVIDKPAGMVVHPAAGNWQGTLVHALLAHCGDSLSGIGGVRRPGIVHRLDKLTSGLLAVAKTDRAHAALAAQFAAHS----VQRSYLALVWGIPRPSAGRIVTQIGRSPANRQKMAVRSSGGREAITNYETLASYGTPGNPVISLIQCRLETGRTHQIRVHLTHIGHPIVGDPVYGGGLK-KAKVLPDDAQNAVTQLRRQALHAISLGFVHPGG-QPLFFESALPPDMAELVHILEKM 984
            K   +T+   A + G RLD++L+ ++ ++SRSRL+AL+  G  T +GRTI + ++RVKPG+ + + +P    AIP+ E IPL VVYED  +IVIDKPAG+VVHPAAGNW GTLVHAL+ HCG SLSG+GGV+RPGIVHR+DK TSGL+ VAK+D AH ALA QFA H     ++RSY ALVWGIP P  G I   +GR P  RQKM V ++GG++A+T+YE L ++G    PV S ++CRLETGRTHQIRVH+ HIG+P++GDP+YG G + KA++LPD  + AV +L RQALHA  LGF HP   Q + FESALP D++ ++  L ++
Sbjct:    9 KGQRFTIEAAAGDEGERLDRFLAKNMPDMSRSRLKALIKAGQATLDGRTIVEPNFRVKPGETYCITVPPAQPAIPKGENIPLDVVYEDDWLIVIDKPAGLVVHPAAGNWSGTLVHALIHHCGGSLSGVGGVKRPGIVHRIDKETSGLMVVAKSDAAHRALAEQFADHGRTGPLERSYEALVWGIPHPPKGTIDAALGRKPQQRQKMGVLAAGGKQAVTHYEVLETFGPAKEPVASRVRCRLETGRTHQIRVHMAHIGNPLIGDPLYGTGFRTKARILPDGPREAVEKLLRQALHATLLGFAHPKDKQAMRFESALPEDISRVLKSLSEV 337          
BLAST of mRNA_P-wetherbeei_contig1086.2.1 vs. uniprot
Match: A0A7S8C5Y9_9HYPH (Pseudouridine synthase n=1 Tax=Kaustia mangrovi TaxID=2593653 RepID=A0A7S8C5Y9_9HYPH)

HSP 1 Score: 360 bits (924), Expect = 5.370e-121
Identity = 195/333 (58.56%), Postives = 238/333 (71.47%), Query Frame = 1
Query:    1 MGTPIKESNYTLTVTATEAGNRLDKWLSAHIAELSRSRLQALLATGMVTRNGRTIDDASYRVKPGDCFTVHIPALVEAIPQAEAIPLHVVYEDADVIVIDKPAGMVVHPAAGNWQGTLVHALLAHCGDSLSGIGGVRRPGIVHRLDKLTSGLLAVAKTDRAHAALAAQFAAHS----VQRSYLALVWGIPRPSAGRIVTQIGRSPANRQKMAVRSSGGREAITNYETLASYGTP--GNPVISLIQCRLETGRTHQIRVHLTHIGHPIVGDPVYGGGLK-KAKVLPDDAQNAVTQLRRQALHAISLGFVHPG-GQPLFFESALPPDMAELVHIL 975
            M  PI++  +++TV   EAG RLD+ LS H AE+SRSR +AL+  GMVT +GRTI + SYRVKPG+   V +P  V A P+ E I L +V+ED  +IVIDKPAG+VVHP AGNW GTLV+AL+AHCGDSLSGIGGVRRPGIVHRLDK TSGL+ VAKTD AHA L+ QFAAH     ++R+Y ALVWG P+   G +   I R   NRQKMAV ++GGR A T Y  +A +  P  G    SL+QC LETGRTHQIRVH+ HIGHP++GD +YG G    A+ LPD A+ A+ +L RQALHA  LGF HP  G+ L FESALP D+  LV+ L
Sbjct:    1 MDEPIRQE-HSITVADAEAGARLDRVLSLHFAEISRSRFKALIEEGMVTADGRTIVEPSYRVKPGERLAVSVPPPVPAEPEGEDIALAIVHEDEHLIVIDKPAGLVVHPGAGNWTGTLVNALIAHCGDSLSGIGGVRRPGIVHRLDKDTSGLMVVAKTDAAHAGLSEQFAAHGRDGRLERAYAALVWGAPKRMTGTVEGNIARKETNRQKMAVTATGGRHATTRYR-VAEHFPPSGGKTAASLVQCHLETGRTHQIRVHMAHIGHPLLGDMIYGAGFAASARTLPDGARKALEELGRQALHAELLGFEHPATGERLRFESALPEDLHHLVNAL 331          
BLAST of mRNA_P-wetherbeei_contig1086.2.1 vs. uniprot
Match: A0A0F2KST0_9PROT (Pseudouridine synthase n=1 Tax=Azospirillum thiophilum TaxID=528244 RepID=A0A0F2KST0_9PROT)

HSP 1 Score: 359 bits (922), Expect = 1.570e-120
Identity = 195/325 (60.00%), Postives = 235/325 (72.31%), Query Frame = 1
Query:   31 TLTVTATEAGNRLDKWLSAHIAELSRSRLQALLATGMVTRNGRTIDDASYRVKPGDCFTVHIPALVEAIPQAEAIPLHVVYEDADVIVIDKPAGMVVHPAAGNWQGTLVHALLAHCGDSLSGIGGVRRPGIVHRLDKLTSGLLAVAKTDRAHAALAAQFAAHSVQRSYLALVWGIPRPSAGRIVTQIGRSPANRQKMAVRSSGGREAITNYETLASYGTPGNPVISLIQCRLETGRTHQIRVHLTHIGHPIVGDPVYGGGL------KKAKVLPDDAQNAVTQLRRQALHAISLGFVHP-GGQPLFFESALPPDMAELVHILEKM 984
            T TV A  AG RLDK L+A + +LSRSR+QALL  G V  +GRTI DAS RVKPG  F + +P    A PQ + IPL VVYEDADV+VIDKPAG+VVHPAAGN  GTLV+ALLAHCGDSLSGIGGVRRPGIVHRLDK TSGL+ VAK DRAH  L  QFA  ++ R+YLALVWG+P P  GRI   IGRS A+R+KMAV + GG+ A T Y  + S+G       SL++C LETGRTHQIRVHLTHIGHP+VGDP+YG G       K A +LP+ A+ ++    RQALHA++L F HP  G+ + F S++P D+ EL+  LE +
Sbjct:   28 TYTVPAPAAGLRLDKALAAGLPDLSRSRVQALLEQGCVRGDGRTITDASLRVKPGQTFVLQVPEAEAAQPQPQDIPLTVVYEDADVLVIDKPAGLVVHPAAGNADGTLVNALLAHCGDSLSGIGGVRRPGIVHRLDKDTSGLMVVAKHDRAHHGLTEQFADRTLSRTYLALVWGVPNPRQGRIEGNIGRSSADRKKMAVVTGGGKPAATRYRVVKSFGMAA----SLVECVLETGRTHQIRVHLTHIGHPLVGDPLYGRGRSGRPGGKFASLLPEPARGSLVGFPRQALHAVALTFRHPVNGEIVTFRSSIPADIHELIVTLETV 348          
BLAST of mRNA_P-wetherbeei_contig1086.2.1 vs. uniprot
Match: UPI0015D4E535 (RluA family pseudouridine synthase n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D4E535)

HSP 1 Score: 358 bits (920), Expect = 2.660e-120
Identity = 190/315 (60.32%), Postives = 232/315 (73.65%), Query Frame = 1
Query:   55 AGNRLDKWLSAHIAELSRSRLQALLATGMVTRNGRTIDDASYRVKPGDCFTVHIPALVEAIPQAEAIPLHVVYEDADVIVIDKPAGMVVHPAAGNWQGTLVHALLAHCGDSLSGIGGVRRPGIVHRLDKLTSGLLAVAKTDRAHAALAAQFAAHSVQRSYLALVWGIPRPSAGRIVTQIGRSPANRQKMAVRSSGGREAITNYETLASYGTPGNPVISLIQCRLETGRTHQIRVHLTHIGHPIVGDPVYGGGL------KKAKVLPDDAQNAVTQLRRQALHAISLGFVHPG-GQPLFFESALPPDMAELVHILE 978
            AG RLDK L+  I +LSRSR+QALL +G V+ +GR + DAS RV+ GD + V +P    A P A+ IPL VV+ED DV+V+DKPAG+VVHPAAGN  GTLV+ALLAHCGDSLSGIGGVRRPGIVHRLDK TSGL+ VAK DRAH AL AQFA  S+ R+YLALVWG+P P  GRI   IGRS A+R+KMAV +SGG+ A T Y   +SYG       +L++C+LETGRTHQIRVH+TH GHP+VGD VYG G        K   LP+  + A+ +  RQALHA ++ FVHPG G+P+ FE+ALP DMA L+  L+
Sbjct:   31 AGERLDKALAVSIPDLSRSRVQALLESGCVSADGRPVADASLRVRAGDRYEVTVPDAEPAEPVAQDIPLTVVHEDEDVVVLDKPAGLVVHPAAGNADGTLVNALLAHCGDSLSGIGGVRRPGIVHRLDKDTSGLMVVAKNDRAHHALTAQFADRSLSRTYLALVWGVPSPREGRIEGNIGRSSADRKKMAVVASGGKHAATRYRVRSSYGLSA----ALVECKLETGRTHQIRVHMTHAGHPLVGDAVYGRGRTARPTGSKTAALPEPVRRALVEFPRQALHAAAIEFVHPGTGKPMRFEAALPADMAALIARLD 341          
BLAST of mRNA_P-wetherbeei_contig1086.2.1 vs. uniprot
Match: A0A5J4E1W9_9BACT (Pseudouridine synthase n=1 Tax=bacterium MnTg02 TaxID=2080452 RepID=A0A5J4E1W9_9BACT)

HSP 1 Score: 358 bits (919), Expect = 4.170e-120
Identity = 188/327 (57.49%), Postives = 235/327 (71.87%), Query Frame = 1
Query:   16 KESNYTLTVTATEAGNRLDKWLSAHIAELSRSRLQALLATGMVTRNGRTIDDASYRVKPGDCFTVHIPALVEAIPQAEAIPLHVVYEDADVIVIDKPAGMVVHPAAGNWQGTLVHALLAHCGDSLSGIGGVRRPGIVHRLDKLTSGLLAVAKTDRAHAALAAQFAAHS----VQRSYLALVWGIPRPSAGRIVTQIGRSPANRQKMAVRSSGGREAITNYETLASYGTPGNPVISLIQCRLETGRTHQIRVHLTHIGHPIVGDPVYGGGLK-KAKVLPDDAQNAVTQLRRQALHAISLGFVHP-GGQPLFFESALPPDMAELVHILE 978
            K   +T  VT  + G RLD++L+  ++++SRSRL+AL+  G V  +G TI + +YRVKPG+CF V +P    AIP+ EAIPL+VV+ED  VI+IDKPAG+VVHPAAG+W GTLV+AL+AHCGDSLSGIGGVRRPGIVHRLDK TSGL+ VAKTD AH  LAAQFA+H     ++RSY ALVWG+P  S GRI T IGR  +NR KMA    GG+ ++T+YE          P+ SL++C LETGRTHQIRVH+ HIGHP++GD  YG G    A+ L  +A+ A+  L RQALHA  LGF+HP  G+ L FES LP D A LV  L+
Sbjct:   20 KLDRHTFRVTEQDQGERLDRFLTRALSDISRSRLKALIKEGHVAHDGATIVEPNYRVKPGECFLVDVPEPEPAIPRPEAIPLNVVFEDDSVIIIDKPAGLVVHPAAGHWTGTLVNALIAHCGDSLSGIGGVRRPGIVHRLDKETSGLMVVAKTDAAHQGLAAQFASHGRDGHLERSYAALVWGVPARSKGRIETGIGRKISNRLKMAAVIKGGKPSVTHYEIARRLPNGDAPLASLVKCTLETGRTHQIRVHMAHIGHPVLGDMTYGAGFAASARKLAPEARAALDTLGRQALHAQFLGFIHPLSGEKLRFESTLPEDFAALVEALK 346          
BLAST of mRNA_P-wetherbeei_contig1086.2.1 vs. uniprot
Match: A0A2U1VF50_9PROT (Pseudouridine synthase n=1 Tax=Azospirillum sp. TSO35-2 TaxID=716796 RepID=A0A2U1VF50_9PROT)

HSP 1 Score: 355 bits (911), Expect = 5.380e-119
Identity = 191/321 (59.50%), Postives = 230/321 (71.65%), Query Frame = 1
Query:   37 TVTATEAGNRLDKWLSAHIAELSRSRLQALLATGMVTRNGRTIDDASYRVKPGDCFTVHIPALVEAIPQAEAIPLHVVYEDADVIVIDKPAGMVVHPAAGNWQGTLVHALLAHCGDSLSGIGGVRRPGIVHRLDKLTSGLLAVAKTDRAHAALAAQFAAHSVQRSYLALVWGIPRPSAGRIVTQIGRSPANRQKMAVRSSGGREAITNYETLASYGTPGNPVISLIQCRLETGRTHQIRVHLTHIGHPIVGDPVYGGGL------KKAKVLPDDAQNAVTQLRRQALHAISLGFVHPG-GQPLFFESALPPDMAELVHILE 978
            TV    AG RLDK L+A + +LSRSR+QALL  G V   GRTI D S RVKPG  FT+ +P    A PQA+ IPL VVYED+DV+V+DKPAG+VVHPAAGN   TLV+ALLAHCGDSLSGIGGVRRPGIVHRLDK TSGL+ VAK DRAH  L  QFA  ++ R+YLALVWG+P P  GRI   IGRS A+R+KMAV + GG+ A T Y  L S+G       +L++C LETGRTHQIRVH+THIGHP+VGDP+YG G       K A  LP+ A++ + +  RQALHA +L F HPG G+ + F S +P D+ EL+  LE
Sbjct:   21 TVPDAAAGERLDKALAAGLPDLSRSRVQALLEQGCVREAGRTITDPSLRVKPGQTFTLRVPDAEPAEPQAQDIPLDVVYEDSDVLVLDKPAGLVVHPAAGNPDSTLVNALLAHCGDSLSGIGGVRRPGIVHRLDKDTSGLMVVAKNDRAHHGLTEQFADRTLSRTYLALVWGVPNPKQGRIEGAIGRSSADRKKMAVVTGGGKHAATRYRVLKSFGQAA----ALVECVLETGRTHQIRVHMTHIGHPLVGDPLYGRGRSSRPGGKHASTLPEPARSRLVEFPRQALHAAALTFRHPGSGEVVEFRSPMPADIHELLVTLE 337          
BLAST of mRNA_P-wetherbeei_contig1086.2.1 vs. uniprot
Match: UPI001AE495E9 (RluA family pseudouridine synthase n=1 Tax=Azospirillum rugosum TaxID=416170 RepID=UPI001AE495E9)

HSP 1 Score: 355 bits (911), Expect = 5.570e-119
Identity = 184/326 (56.44%), Postives = 231/326 (70.86%), Query Frame = 1
Query:   28 YTLTVTATEAGNRLDKWLSAHIAELSRSRLQALLATGMVTRNGRTIDDASYRVKPGDCFTVHIPALVEAIPQAEAIPLHVVYEDADVIVIDKPAGMVVHPAAGNWQGTLVHALLAHCGDSLSGIGGVRRPGIVHRLDKLTSGLLAVAKTDRAHAALAAQFAAHSVQRSYLALVWGIPRPSAGRIVTQIGRSPANRQKMAVRSSGGREAITNYETLASYGTPGNPVISLIQCRLETGRTHQIRVHLTHIGHPIVGDPVYGGGL------KKAKVLPDDAQNAVTQLRRQALHAISLGFVHPG-GQPLFFESALPPDMAELVHILEKM 984
            +T  + A   G+RLDK L+A +  LSRSR+QALL  G V   GRTI D S RVKPG  F V +P    A P+A+ IPL V+YED DV+VIDKPAG+VVHPAAGN   TLV+ALLAHCGDSLSGIGGV+RPGIVHRLDK TSGL+ VAK DRAH AL  QF+  S+ R+Y ALVWG+P P  GRI   IGRS A+R+KMAV + GG+ A T Y  + ++GT     ++L++C LETGRTHQIRVH+ HIGHP+VGDP+YG G       + A  LP+  +       RQALHA+ L F+HP  G+ + F+++LPPD+ +L+H LE +
Sbjct:   19 HTYEIPAESGGDRLDKALAAGLPGLSRSRVQALLEQGCVREGGRTITDPSLRVKPGQTFDVFVPEAEPAQPEAQDIPLDVIYEDEDVLVIDKPAGLVVHPAAGNPDNTLVNALLAHCGDSLSGIGGVKRPGIVHRLDKDTSGLMVVAKNDRAHHALTEQFSGRSLSRTYQALVWGVPSPKEGRIEGNIGRSTADRKKMAVVAHGGKHAATRYRVVKAFGT----ALALVECVLETGRTHQIRVHMAHIGHPVVGDPLYGKGRAGRAGGRHASTLPEPVRGLFVGFPRQALHAVGLSFLHPTRGEQVRFQTSLPPDIRDLIHTLESL 340          
BLAST of mRNA_P-wetherbeei_contig1086.2.1 vs. uniprot
Match: A0A1M3LT29_9PROT (Pseudouridine synthase n=1 Tax=Magnetospirillum sp. 64-120 TaxID=1895778 RepID=A0A1M3LT29_9PROT)

HSP 1 Score: 354 bits (909), Expect = 7.460e-119
Identity = 190/317 (59.94%), Postives = 227/317 (71.61%), Query Frame = 1
Query:   40 VTATEAGNRLDKWLSAHIAELSRSRLQALLATGMVTRNGRTIDDASYRVKPGDCFTVHIPALVEAIPQAEAIPLHVVYEDADVIVIDKPAGMVVHPAAGNWQGTLVHALLAHCGDSLSGIGGVRRPGIVHRLDKLTSGLLAVAKTDRAHAALAAQFAAHSVQRSYLALVWGIPRPSAGRIVTQIGRSPANRQKMAVRSSGGREAITNYETLASYGTPGNPVISLIQCRLETGRTHQIRVHLTHIGHPIVGDPVYGGG-LKKAKVLPDDAQNAVTQLRRQALHAISLGFVHP-GGQPLFFESALPPDMAELVHILEKM 984
            VTA EAG+RLDKWLS+ + +LSR+R++ L+  G VT  G+TI DAS RVKPG  F V IP    A P  + IPL + YED D+IVIDKPAG+VVHPA G+   TLV+ALLAHCGDSLSGIGGV+RPGIVHR+DK TSGLL VAK DRAH  LA QFA HS++R Y ALVWG P P  G I   IGRSP +R+KMA+ S GG+ A+T Y  L S+       +SL++CRL TGRTHQIRVH+T IGHP+VGD VYG     K K LPD+A+ A+T   RQALHA  LGF HP  G  L FES +P D+ EL+  LE +
Sbjct:   15 VTAEEAGSRLDKWLSSRLPDLSRTRIKGLIDDGRVTATGQTITDASARVKPGQDFVVSIPPDRPADPIPQDIPLSIAYEDGDLIVIDKPAGLVVHPAPGSPDQTLVNALLAHCGDSLSGIGGVKRPGIVHRIDKDTSGLLVVAKNDRAHHGLAEQFAVHSLERVYRALVWGTPVPREGEITGNIGRSPQDRKKMAIVSHGGKPALTRYRVLKSFAAG---TVSLVECRLATGRTHQIRVHMTSIGHPLVGDQVYGRSRAAKLKALPDEARQALTSFPRQALHAAVLGFNHPISGALLRFESHIPLDINELIATLESV 328          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1086.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TVP3_9PROT1.060e-14563.64Pseudouridine synthase n=1 Tax=Alphaproteobacteria... [more]
A0A352K9U0_9PROT5.210e-13062.58Pseudouridine synthase n=6 Tax=Alphaproteobacteria... [more]
A0A2H6J111_9BACT4.040e-12355.62Pseudouridine synthase n=1 Tax=bacterium BMS3Bbin1... [more]
A0A7S8C5Y9_9HYPH5.370e-12158.56Pseudouridine synthase n=1 Tax=Kaustia mangrovi Ta... [more]
A0A0F2KST0_9PROT1.570e-12060.00Pseudouridine synthase n=1 Tax=Azospirillum thioph... [more]
UPI0015D4E5352.660e-12060.32RluA family pseudouridine synthase n=1 Tax=Azospir... [more]
A0A5J4E1W9_9BACT4.170e-12057.49Pseudouridine synthase n=1 Tax=bacterium MnTg02 Ta... [more]
A0A2U1VF50_9PROT5.380e-11959.50Pseudouridine synthase n=1 Tax=Azospirillum sp. TS... [more]
UPI001AE495E95.570e-11956.44RluA family pseudouridine synthase n=1 Tax=Azospir... [more]
A0A1M3LT29_9PROT7.460e-11959.94Pseudouridine synthase n=1 Tax=Magnetospirillum sp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1086contigP-wetherbeei_contig1086:819..1805 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1207063.P24_13498
Preferred namerluD
PFAMsPseudoU_synth_2,S4
Model size987
Max annot lvl204441|Rhodospirillales
KEGG koko:K06180
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.22e-119
EggNOG OGsCOG0564@1|root,COG0564@2|Bacteria,1MUBN@1224|Proteobacteria,2TSBK@28211|Alphaproteobacteria,2JQ4Y@204441|Rhodospirillales
EC5.4.99.23
DescriptionResponsible for synthesis of pseudouridine from uracil
Cds size987
COG categoryJ
BRITEko00000,ko01000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185887.5596907-CDS-P-wetherbeei_contig1086:818..18051683185887.5596907-CDS-P-wetherbeei_contig1086:818..1805Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1086 819..1805 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1086.2.1prot_P-wetherbeei_contig1086.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1086 819..1805 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1086.2.1

>prot_P-wetherbeei_contig1086.2.1 ID=prot_P-wetherbeei_contig1086.2.1|Name=mRNA_P-wetherbeei_contig1086.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=329bp
MGTPIKESNYTLTVTATEAGNRLDKWLSAHIAELSRSRLQALLATGMVTR
NGRTIDDASYRVKPGDCFTVHIPALVEAIPQAEAIPLHVVYEDADVIVID
KPAGMVVHPAAGNWQGTLVHALLAHCGDSLSGIGGVRRPGIVHRLDKLTS
GLLAVAKTDRAHAALAAQFAAHSVQRSYLALVWGIPRPSAGRIVTQIGRS
PANRQKMAVRSSGGREAITNYETLASYGTPGNPVISLIQCRLETGRTHQI
RVHLTHIGHPIVGDPVYGGGLKKAKVLPDDAQNAVTQLRRQALHAISLGF
VHPGGQPLFFESALPPDMAELVHILEKM*
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mRNA from alignment at P-wetherbeei_contig1086:819..1805-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1086.2.1 ID=mRNA_P-wetherbeei_contig1086.2.1|Name=mRNA_P-wetherbeei_contig1086.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=987bp|location=Sequence derived from alignment at P-wetherbeei_contig1086:819..1805- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGAACTCCGATTAAAGAAAGCAACTACACCCTTACCGTCACTGCGAC GGAAGCCGGTAATCGTCTGGACAAATGGCTGAGCGCGCATATTGCGGAAC TCAGCCGTTCGCGTTTACAGGCCTTGCTGGCAACCGGAATGGTTACCCGG AATGGGCGGACGATAGACGACGCCTCTTACAGGGTCAAACCCGGCGATTG TTTTACGGTGCATATCCCCGCCCTTGTTGAGGCCATACCGCAGGCCGAGG CCATCCCCCTGCATGTGGTTTATGAAGACGCGGACGTGATCGTCATTGAC AAGCCGGCCGGCATGGTGGTGCATCCCGCCGCCGGTAACTGGCAGGGCAC CCTGGTGCATGCGCTGCTGGCGCATTGCGGCGACAGCCTTTCCGGCATTG GCGGGGTACGGCGGCCGGGCATTGTCCACCGGCTGGACAAGCTGACCAGC GGCCTGCTGGCGGTTGCCAAAACCGACCGCGCCCATGCAGCACTGGCGGC GCAGTTTGCCGCCCACAGCGTCCAGCGCAGCTATCTGGCGCTGGTATGGG GTATCCCGCGCCCCAGTGCCGGGCGCATTGTCACCCAGATTGGCCGCAGC CCTGCAAATCGGCAAAAAATGGCCGTAAGGTCAAGCGGCGGCCGCGAAGC CATCACCAATTATGAAACGCTTGCAAGTTATGGCACGCCCGGCAATCCCG TAATCAGTCTGATACAATGCCGCCTGGAAACCGGCCGCACGCATCAAATC CGGGTGCATCTGACGCATATCGGGCACCCGATTGTGGGCGATCCGGTTTA TGGAGGCGGCCTTAAAAAAGCCAAGGTTCTGCCTGATGATGCACAAAATG CGGTTACACAGCTCAGACGGCAGGCCTTGCACGCCATCTCTCTGGGCTTT GTTCACCCGGGGGGGCAGCCTTTGTTTTTCGAAAGCGCGCTGCCGCCCGA TATGGCGGAGCTCGTGCATATTCTGGAAAAAATGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1086:819..1805-

>mRNA_P-wetherbeei_contig1086.2.1 ID=mRNA_P-wetherbeei_contig1086.2.1|Name=mRNA_P-wetherbeei_contig1086.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=987bp|location=Sequence derived from alignment at P-wetherbeei_contig1086:819..1805- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGAACTCCGATTAAAGAAAGCAACTACACCCTTACCGTCACTGCGAC
GGAAGCCGGTAATCGTCTGGACAAATGGCTGAGCGCGCATATTGCGGAAC
TCAGCCGTTCGCGTTTACAGGCCTTGCTGGCAACCGGAATGGTTACCCGG
AATGGGCGGACGATAGACGACGCCTCTTACAGGGTCAAACCCGGCGATTG
TTTTACGGTGCATATCCCCGCCCTTGTTGAGGCCATACCGCAGGCCGAGG
CCATCCCCCTGCATGTGGTTTATGAAGACGCGGACGTGATCGTCATTGAC
AAGCCGGCCGGCATGGTGGTGCATCCCGCCGCCGGTAACTGGCAGGGCAC
CCTGGTGCATGCGCTGCTGGCGCATTGCGGCGACAGCCTTTCCGGCATTG
GCGGGGTACGGCGGCCGGGCATTGTCCACCGGCTGGACAAGCTGACCAGC
GGCCTGCTGGCGGTTGCCAAAACCGACCGCGCCCATGCAGCACTGGCGGC
GCAGTTTGCCGCCCACAGCGTCCAGCGCAGCTATCTGGCGCTGGTATGGG
GTATCCCGCGCCCCAGTGCCGGGCGCATTGTCACCCAGATTGGCCGCAGC
CCTGCAAATCGGCAAAAAATGGCCGTAAGGTCAAGCGGCGGCCGCGAAGC
CATCACCAATTATGAAACGCTTGCAAGTTATGGCACGCCCGGCAATCCCG
TAATCAGTCTGATACAATGCCGCCTGGAAACCGGCCGCACGCATCAAATC
CGGGTGCATCTGACGCATATCGGGCACCCGATTGTGGGCGATCCGGTTTA
TGGAGGCGGCCTTAAAAAAGCCAAGGTTCTGCCTGATGATGCACAAAATG
CGGTTACACAGCTCAGACGGCAGGCCTTGCACGCCATCTCTCTGGGCTTT
GTTCACCCGGGGGGGCAGCCTTTGTTTTTCGAAAGCGCGCTGCCGCCCGA
TATGGCGGAGCTCGTGCATATTCTGGAAAAAATGTAA
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