mRNA_P-wetherbeei_contig1086.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1086.1.1
Unique NamemRNA_P-wetherbeei_contig1086.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1086.1.1 vs. uniprot
Match: A0A3C0TWE3_9PROT (RNA polymerase sigma factor RpoH n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TWE3_9PROT)

HSP 1 Score: 402 bits (1034), Expect = 6.970e-140
Identity = 195/225 (86.67%), Postives = 218/225 (96.89%), Query Frame = 1
Query:   25 TLPVLTPDGGLSRYLQEIRQFPVLDPDEEYMLAKRWREHGDTEAAHKMVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQSVKRFEPEKGFRLSTYAMWWIRASIQEYILRSWSLVKIGTTAAQKKLFFNLRRVKNQISALEDGDMTSEQVTLIANRLNVPEQEVTNMNQRLAGQDNSLNAPLRMDAEGEWQDWLVDDTPDQESVLGDSEEFKLRHNLLEDA 699
            +LPVLTPDGGL+RYLQEIR+FPVLDPDEEYMLAKRWREHGDT+AAH+MVTSHLRLVAK+AMGYRGYGLPIGEVISEGN+GLMQ+VKRFEPEKGFRLSTYAMWWIRA+IQEYILRSWSLVKIGTTAAQKKLFFNLRRVKNQI AL+DGDMTSEQV LIA++L+V EQ+VT+MNQRL GQDNSLNAPLRMDA+GEWQDWLVD+ PDQE++LG+SEE+ LR+ LLE+A
Sbjct:   10 SLPVLTPDGGLARYLQEIRRFPVLDPDEEYMLAKRWREHGDTDAAHRMVTSHLRLVAKMAMGYRGYGLPIGEVISEGNIGLMQAVKRFEPEKGFRLSTYAMWWIRAAIQEYILRSWSLVKIGTTAAQKKLFFNLRRVKNQIQALDDGDMTSEQVRLIADKLSVSEQDVTSMNQRLTGQDNSLNAPLRMDADGEWQDWLVDENPDQETLLGESEEYNLRYALLEEA 234          
BLAST of mRNA_P-wetherbeei_contig1086.1.1 vs. uniprot
Match: A0A353LTL2_9PROT (RNA polymerase sigma factor RpoH n=7 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LTL2_9PROT)

HSP 1 Score: 388 bits (996), Expect = 4.390e-134
Identity = 191/230 (83.04%), Postives = 211/230 (91.74%), Query Frame = 1
Query:    1 MAETREKATLPVLTPDGGLSRYLQEIRQFPVLDPDEEYMLAKRWREHGDTEAAHKMVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQSVKRFEPEKGFRLSTYAMWWIRASIQEYILRSWSLVKIGTTAAQKKLFFNLRRVKNQISALEDGDMTSEQVTLIANRLNVPEQEVTNMNQRLAGQDNSLNAPLRMDAEGEWQDWLVDDTPDQESVLGDSEEFKLRHNLL 690
            MA T+    LPVLTPDGGL+RYLQEIRQFP+L+P+EEYMLAK WREH DT+AAHK+VTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQSVKRFEP+KGFRL+TYAMWWIRA+IQEYILRSWSLVKIGTTAAQKKLFFNLRRVK QI ALE+GDMT EQV LIA++LNV E +VT+MNQR+AG DNSLNAPLR D EGEWQDWLVD+TPDQE+ LG+SEEF LRH +L
Sbjct:    1 MANTKN---LPVLTPDGGLARYLQEIRQFPMLEPEEEYMLAKSWREHNDTDAAHKLVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQSVKRFEPDKGFRLATYAMWWIRAAIQEYILRSWSLVKIGTTAAQKKLFFNLRRVKGQIQALEEGDMTPEQVQLIADKLNVSESDVTSMNQRMAGHDNSLNAPLRADTEGEWQDWLVDETPDQETQLGESEEFTLRHKML 227          
BLAST of mRNA_P-wetherbeei_contig1086.1.1 vs. uniprot
Match: A0A2D4VF19_9HYPH (RNA polymerase sigma factor RpoH n=1 Tax=Parvibaculum sp. TaxID=2024848 RepID=A0A2D4VF19_9HYPH)

HSP 1 Score: 360 bits (925), Expect = 2.790e-123
Identity = 179/221 (81.00%), Postives = 197/221 (89.14%), Query Frame = 1
Query:   31 PVLTPDGGLSRYLQEIRQFPVLDPDEEYMLAKRWREHGDTEAAHKMVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQSVKRFEPEKGFRLSTYAMWWIRASIQEYILRSWSLVKIGTTAAQKKLFFNLRRVKNQISALEDGDMTSEQVTLIANRLNVPEQEVTNMNQRLAGQDNSLNAPLRMDAE-GEWQDWLVDDTPDQESVLGDSEEFKLRHNLL 690
            P   P+G LSRYLQEIR+FP+L+P EEYMLAKRW+EH D+EAAHKMVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQ+VKRFEPEKGFRL+TYAMWWIRASIQEYILRSWSLVK+GTTAAQKKLFFNLR+VK QI A+EDGD+  EQVT IA+RL V E EV +MN+R+AG DNSLNAPLR D+E GEWQDWLVDD PDQES LGDSEE  LR  +L
Sbjct:    7 PAPNPEGSLSRYLQEIRKFPMLEPQEEYMLAKRWKEHEDSEAAHKMVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQAVKRFEPEKGFRLATYAMWWIRASIQEYILRSWSLVKMGTTAAQKKLFFNLRKVKGQIQAIEDGDLRHEQVTEIADRLGVTEDEVISMNRRMAGPDNSLNAPLRQDSESGEWQDWLVDDAPDQESELGDSEEMNLRREML 227          
BLAST of mRNA_P-wetherbeei_contig1086.1.1 vs. uniprot
Match: A0A6N6VNW9_9HYPH (RNA polymerase sigma factor RpoH n=3 Tax=Parvibaculum TaxID=256616 RepID=A0A6N6VNW9_9HYPH)

HSP 1 Score: 358 bits (919), Expect = 2.200e-122
Identity = 176/225 (78.22%), Postives = 201/225 (89.33%), Query Frame = 1
Query:   28 LPVLTPDGGLSRYLQEIRQFPVLDPDEEYMLAKRWREHGDTEAAHKMVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQSVKRFEPEKGFRLSTYAMWWIRASIQEYILRSWSLVKIGTTAAQKKLFFNLRRVKNQISALEDGDMTSEQVTLIANRLNVPEQEVTNMNQRLAGQDNSLNAPLRMDAEG-EWQDWLVDDTPDQESVLGDSEEFKLRHNLLEDA 699
            +P  +P+G LSRYLQEIR+FP+L+P EEYMLAKRW+EH D+EAAHK+VTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQ+VKRFEPEKGFRL+TYAMWWIRASIQEYILRSWSLVK+GTTAAQKKLFFNLR+VK QI A+E+GD+  E VT IA+RL V E+EVT+MN+RL+G DNSLNAPLR D+EG EWQDWLVDD+ DQE+ LGD EE  LRH +L  A
Sbjct:    5 MPAPSPEGSLSRYLQEIRKFPMLEPQEEYMLAKRWKEHEDSEAAHKLVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQAVKRFEPEKGFRLATYAMWWIRASIQEYILRSWSLVKMGTTAAQKKLFFNLRKVKGQIQAIEEGDLHPEHVTYIADRLGVTEEEVTSMNRRLSGPDNSLNAPLRQDSEGGEWQDWLVDDSADQETTLGDQEEMGLRHEMLAQA 229          
BLAST of mRNA_P-wetherbeei_contig1086.1.1 vs. uniprot
Match: A0A7Y8SQT8_9PROT (RNA polymerase sigma factor RpoH n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y8SQT8_9PROT)

HSP 1 Score: 352 bits (903), Expect = 6.610e-120
Identity = 171/226 (75.66%), Postives = 198/226 (87.61%), Query Frame = 1
Query:   22 ATLPVLTPDGGLSRYLQEIRQFPVLDPDEEYMLAKRWREHGDTEAAHKMVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQSVKRFEPEKGFRLSTYAMWWIRASIQEYILRSWSLVKIGTTAAQKKLFFNLRRVKNQISALEDGDMTSEQVTLIANRLNVPEQEVTNMNQRLAGQDNSLNAPLRMDAEGEWQDWLVDDTPDQESVLGDSEEFKLRHNLLEDA 699
            + LP L+ +GGLSRYL EIR+FP+L+PDEEYMLAKRWRE  DTEAAH++VTSHLRLVAKIAMGYRGYGLP+ E+ISEGNVGLMQ+VKRFEPEKGFRL+TYAMWWIRA+IQEYILRSWSLVKIGTTAAQKKLFFNLRR+K QI A+++GD+  +QVT IA +L VPEQEV +MN+RLA  DNSLNAPLR D +GEWQDWLVD+  DQE++L + EE   R  LLEDA
Sbjct:    3 SNLPTLSGEGGLSRYLAEIRKFPMLEPDEEYMLAKRWREDEDTEAAHQLVTSHLRLVAKIAMGYRGYGLPVAEIISEGNVGLMQAVKRFEPEKGFRLATYAMWWIRAAIQEYILRSWSLVKIGTTAAQKKLFFNLRRIKGQIEAIDEGDLHPDQVTTIATKLGVPEQEVVSMNRRLAAPDNSLNAPLRQDGDGEWQDWLVDEGTDQETLLAEREELDERRELLEDA 228          
BLAST of mRNA_P-wetherbeei_contig1086.1.1 vs. uniprot
Match: A0A2E2QJV4_9PROT (RNA polymerase sigma factor RpoH n=6 Tax=Sneathiella TaxID=510690 RepID=A0A2E2QJV4_9PROT)

HSP 1 Score: 350 bits (898), Expect = 2.700e-119
Identity = 167/226 (73.89%), Postives = 201/226 (88.94%), Query Frame = 1
Query:   22 ATLPVLTPDGGLSRYLQEIRQFPVLDPDEEYMLAKRWREHGDTEAAHKMVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQSVKRFEPEKGFRLSTYAMWWIRASIQEYILRSWSLVKIGTTAAQKKLFFNLRRVKNQISALEDGDMTSEQVTLIANRLNVPEQEVTNMNQRLAGQDNSLNAPLRMDAEGEWQDWLVDDTPDQESVLGDSEEFKLRHNLLEDA 699
            +TLPVLTP+GGLSRYLQEIR+FP+L+  EEYMLAK W++HGDTEAAHKMVTSHLRLVAKIAMGYRGYGLPI E+ISEGNVG+MQ+VKRFEPEKGFRLSTYAMWWIRA+IQEYILR+WSLVK+GTTAAQKKLFFNLR++K QI A+++GDM++EQV  I+ +L V E EV NMN+RL   D+SLNAP+R ++EGEW DWL D+TP+QE+V  ++EE K R  +LE+A
Sbjct:    5 STLPVLTPEGGLSRYLQEIRKFPMLEQSEEYMLAKAWKDHGDTEAAHKMVTSHLRLVAKIAMGYRGYGLPIAELISEGNVGMMQAVKRFEPEKGFRLSTYAMWWIRAAIQEYILRTWSLVKMGTTAAQKKLFFNLRKIKGQIEAIDEGDMSAEQVKTISKKLGVSEDEVINMNRRLTAPDHSLNAPMRAESEGEWMDWLEDETPNQETVYAENEELKSRRAMLENA 230          
BLAST of mRNA_P-wetherbeei_contig1086.1.1 vs. uniprot
Match: UPI00146A2C5E (RNA polymerase sigma factor RpoH n=2 Tax=Sneathiella TaxID=510690 RepID=UPI00146A2C5E)

HSP 1 Score: 349 bits (895), Expect = 7.460e-119
Identity = 166/224 (74.11%), Postives = 197/224 (87.95%), Query Frame = 1
Query:   28 LPVLTPDGGLSRYLQEIRQFPVLDPDEEYMLAKRWREHGDTEAAHKMVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQSVKRFEPEKGFRLSTYAMWWIRASIQEYILRSWSLVKIGTTAAQKKLFFNLRRVKNQISALEDGDMTSEQVTLIANRLNVPEQEVTNMNQRLAGQDNSLNAPLRMDAEGEWQDWLVDDTPDQESVLGDSEEFKLRHNLLEDA 699
            +P LTP+GGLSRYLQEIR+FP+L+PDEEYMLAK WR+  D+EAAHKMVTSHLRLVAKIAMGYRGYGLP+GE+I+EGNVG+MQ+VKRFEPEKGFRLSTYAMWWIRA+IQEYILR+WSLVK+GTTAAQKKLFFNLR++K QI A+++GDMT EQV  I+ +L V E EV NMN+RL   D+SLN+P+R D+EGEW DWL DDTPDQE+V  ++EE K R  +LE A
Sbjct:    6 MPTLTPEGGLSRYLQEIRKFPMLEPDEEYMLAKAWRDREDSEAAHKMVTSHLRLVAKIAMGYRGYGLPVGELIAEGNVGMMQAVKRFEPEKGFRLSTYAMWWIRAAIQEYILRTWSLVKMGTTAAQKKLFFNLRKIKGQIQAIDEGDMTHEQVKTISTKLGVSETEVINMNRRLTAPDHSLNSPMRADSEGEWMDWLEDDTPDQETVYAENEELKSRRAMLESA 229          
BLAST of mRNA_P-wetherbeei_contig1086.1.1 vs. uniprot
Match: A0A2E5KRC5_9PROT (RNA polymerase sigma factor RpoH n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E5KRC5_9PROT)

HSP 1 Score: 348 bits (894), Expect = 1.100e-118
Identity = 165/227 (72.69%), Postives = 200/227 (88.11%), Query Frame = 1
Query:   19 KATLPVLTPDGGLSRYLQEIRQFPVLDPDEEYMLAKRWREHGDTEAAHKMVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQSVKRFEPEKGFRLSTYAMWWIRASIQEYILRSWSLVKIGTTAAQKKLFFNLRRVKNQISALEDGDMTSEQVTLIANRLNVPEQEVTNMNQRLAGQDNSLNAPLRMDAEGEWQDWLVDDTPDQESVLGDSEEFKLRHNLLEDA 699
            K  +PV++P+GGLSRYLQEIR FP+LD +EEY+LAKRWREH D ++AH +VTSHLRLVAKIAMGYRGYGLP+GE+ISEGNVGLMQ+VKRFEPEKGFRL+TYAMWWIRASIQEYILRSWSLVK+GTT AQKKLFFNLR++K Q+ A+E+GD+  + V  IA++L+V E +V  MN+RL+G D+SLNAP+R+D EGEWQDWLVD+TPDQE+ LG++EE   R NLL DA
Sbjct:    3 KNLIPVISPEGGLSRYLQEIRNFPMLDAEEEYILAKRWREHDDVDSAHTLVTSHLRLVAKIAMGYRGYGLPVGELISEGNVGLMQAVKRFEPEKGFRLATYAMWWIRASIQEYILRSWSLVKMGTTTAQKKLFFNLRKLKGQLKAIEEGDLHPDTVKTIADKLDVSEDDVVQMNRRLSGADHSLNAPMRVDGEGEWQDWLVDETPDQETALGETEELGRRRNLLADA 229          
BLAST of mRNA_P-wetherbeei_contig1086.1.1 vs. uniprot
Match: A0A3M0XWM2_9PROT (RNA polymerase sigma factor RpoH n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M0XWM2_9PROT)

HSP 1 Score: 347 bits (891), Expect = 3.240e-118
Identity = 167/224 (74.55%), Postives = 199/224 (88.84%), Query Frame = 1
Query:   28 LPVLTPDGGLSRYLQEIRQFPVLDPDEEYMLAKRWREHGDTEAAHKMVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQSVKRFEPEKGFRLSTYAMWWIRASIQEYILRSWSLVKIGTTAAQKKLFFNLRRVKNQISALEDGDMTSEQVTLIANRLNVPEQEVTNMNQRLAGQDNSLNAPLRMDAEGEWQDWLVDDTPDQESVLGDSEEFKLRHNLLEDA 699
            LPVL  +G LSRYLQEIR+FP+L+ DEEY+LAKRWREHGD EAAHK+VTSHLRLVAKIAMGYRGYGLP+ E+ISEGNVG+MQ+VKRF+PE+GFRL+TYAMWWIRA+IQEYIL SWSLVK+GTTAAQKKLFFNLR++K Q+ A+E+GD+  EQVT IA  LNVPE +V NMN+RLA  D+SLNAPLR+D +GEWQDWLVD++ DQES+L D+EE + R  LLE+A
Sbjct:    6 LPVLVTEGNLSRYLQEIRKFPMLEADEEYILAKRWREHGDIEAAHKLVTSHLRLVAKIAMGYRGYGLPLSELISEGNVGMMQAVKRFDPERGFRLATYAMWWIRAAIQEYILHSWSLVKMGTTAAQKKLFFNLRKLKGQMQAIEEGDLQPEQVTKIAETLNVPEVDVVNMNRRLAAPDHSLNAPLRIDGDGEWQDWLVDESEDQESLLADAEELEQRRALLEEA 229          
BLAST of mRNA_P-wetherbeei_contig1086.1.1 vs. uniprot
Match: A7HV40_PARL1 (RNA polymerase sigma factor RpoH n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A7HV40_PARL1)

HSP 1 Score: 348 bits (893), Expect = 7.690e-118
Identity = 171/221 (77.38%), Postives = 196/221 (88.69%), Query Frame = 1
Query:   31 PVLTPDGGLSRYLQEIRQFPVLDPDEEYMLAKRWREHGDTEAAHKMVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQSVKRFEPEKGFRLSTYAMWWIRASIQEYILRSWSLVKIGTTAAQKKLFFNLRRVKNQISALEDGDMTSEQVTLIANRLNVPEQEVTNMNQRLAGQDNSLNAPLRMDAEG-EWQDWLVDDTPDQESVLGDSEEFKLRHNLL 690
            P   P+G LSRYLQEIR+FP+L+P EEYMLAKRWREH DTEAAH++VTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQ+VKRFEPE+GFRL+TYAMWWIRASIQEYILRSWSLVK+GTTAAQKKLFFNLR+VK QI A+E+GD+  EQV +I++RL V E EV +MN+RL+G DNSLNAPLR D+EG EWQDWLVDDT DQE+ LG++EE   R  +L
Sbjct:   46 PAPNPEGSLSRYLQEIRKFPMLEPQEEYMLAKRWREHEDTEAAHQLVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQAVKRFEPERGFRLATYAMWWIRASIQEYILRSWSLVKMGTTAAQKKLFFNLRKVKGQIQAIEEGDLHPEQVKVISDRLGVTEDEVISMNRRLSGPDNSLNAPLRQDSEGGEWQDWLVDDTADQEATLGEAEELDQRREML 266          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1086.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TWE3_9PROT6.970e-14086.67RNA polymerase sigma factor RpoH n=1 Tax=Alphaprot... [more]
A0A353LTL2_9PROT4.390e-13483.04RNA polymerase sigma factor RpoH n=7 Tax=Alphaprot... [more]
A0A2D4VF19_9HYPH2.790e-12381.00RNA polymerase sigma factor RpoH n=1 Tax=Parvibacu... [more]
A0A6N6VNW9_9HYPH2.200e-12278.22RNA polymerase sigma factor RpoH n=3 Tax=Parvibacu... [more]
A0A7Y8SQT8_9PROT6.610e-12075.66RNA polymerase sigma factor RpoH n=1 Tax=Alphaprot... [more]
A0A2E2QJV4_9PROT2.700e-11973.89RNA polymerase sigma factor RpoH n=6 Tax=Sneathiel... [more]
UPI00146A2C5E7.460e-11974.11RNA polymerase sigma factor RpoH n=2 Tax=Sneathiel... [more]
A0A2E5KRC5_9PROT1.100e-11872.69RNA polymerase sigma factor RpoH n=1 Tax=Alphaprot... [more]
A0A3M0XWM2_9PROT3.240e-11874.55RNA polymerase sigma factor RpoH n=1 Tax=Alphaprot... [more]
A7HV40_PARL17.690e-11877.38RNA polymerase sigma factor RpoH n=5 Tax=Alphaprot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1086contigP-wetherbeei_contig1086:3..701 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog402881.Plav_2159
Preferred namerpoH
PFAMsSigma70_r1_2,Sigma70_r2,Sigma70_r4
Model size699
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K03089
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.26e-118
EggNOG OGsCOG0568@1|root,COG0568@2|Bacteria,1MVWR@1224|Proteobacteria,2TR9Q@28211|Alphaproteobacteria,1JNJ7@119043|Rhodobiaceae
DescriptionSigma-70 factor, region 1.2
Cds size699
COG categoryK
BRITEko00000,ko03021
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185887.5309913-CDS-P-wetherbeei_contig1086:2..7011683185887.5309913-CDS-P-wetherbeei_contig1086:2..701Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1086 3..701 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1086.1.1prot_P-wetherbeei_contig1086.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1086 3..701 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1086.1.1

>prot_P-wetherbeei_contig1086.1.1 ID=prot_P-wetherbeei_contig1086.1.1|Name=mRNA_P-wetherbeei_contig1086.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=233bp
MAETREKATLPVLTPDGGLSRYLQEIRQFPVLDPDEEYMLAKRWREHGDT
EAAHKMVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQSVKRFEPEK
GFRLSTYAMWWIRASIQEYILRSWSLVKIGTTAAQKKLFFNLRRVKNQIS
ALEDGDMTSEQVTLIANRLNVPEQEVTNMNQRLAGQDNSLNAPLRMDAEG
EWQDWLVDDTPDQESVLGDSEEFKLRHNLLEDA
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mRNA from alignment at P-wetherbeei_contig1086:3..701-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1086.1.1 ID=mRNA_P-wetherbeei_contig1086.1.1|Name=mRNA_P-wetherbeei_contig1086.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=699bp|location=Sequence derived from alignment at P-wetherbeei_contig1086:3..701- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTGAGACGAGAGAAAAGGCGACTTTACCTGTATTGACCCCGGATGG CGGGCTATCCCGCTATTTGCAGGAAATCCGTCAGTTCCCGGTGCTGGACC CGGATGAAGAATATATGCTGGCCAAACGCTGGCGCGAACATGGCGACACC GAGGCCGCGCATAAAATGGTGACCAGCCATTTGCGGCTGGTGGCGAAAAT CGCCATGGGCTATCGCGGCTATGGGCTGCCGATTGGCGAGGTGATTTCAG AAGGCAATGTCGGGCTGATGCAGTCCGTCAAACGTTTTGAGCCGGAAAAA GGCTTTCGCCTGTCCACCTACGCCATGTGGTGGATCCGCGCCTCGATCCA GGAATATATTCTGCGTTCCTGGAGCCTGGTGAAAATCGGCACCACAGCGG CGCAGAAAAAGCTGTTCTTCAATCTGCGGCGGGTCAAGAACCAGATTTCC GCGCTGGAAGATGGCGACATGACCTCGGAACAGGTGACCCTGATCGCCAA CCGACTGAACGTGCCTGAGCAGGAAGTCACCAATATGAACCAGCGCCTGG CGGGCCAGGACAATTCGCTCAACGCGCCGCTGCGCATGGATGCGGAAGGC GAATGGCAGGACTGGCTGGTCGATGACACGCCGGACCAGGAATCCGTGCT GGGCGACAGCGAAGAGTTCAAACTGCGCCATAACTTGCTGGAGGATGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1086:3..701-

>mRNA_P-wetherbeei_contig1086.1.1 ID=mRNA_P-wetherbeei_contig1086.1.1|Name=mRNA_P-wetherbeei_contig1086.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=699bp|location=Sequence derived from alignment at P-wetherbeei_contig1086:3..701- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTGAGACGAGAGAAAAGGCGACTTTACCTGTATTGACCCCGGATGG
CGGGCTATCCCGCTATTTGCAGGAAATCCGTCAGTTCCCGGTGCTGGACC
CGGATGAAGAATATATGCTGGCCAAACGCTGGCGCGAACATGGCGACACC
GAGGCCGCGCATAAAATGGTGACCAGCCATTTGCGGCTGGTGGCGAAAAT
CGCCATGGGCTATCGCGGCTATGGGCTGCCGATTGGCGAGGTGATTTCAG
AAGGCAATGTCGGGCTGATGCAGTCCGTCAAACGTTTTGAGCCGGAAAAA
GGCTTTCGCCTGTCCACCTACGCCATGTGGTGGATCCGCGCCTCGATCCA
GGAATATATTCTGCGTTCCTGGAGCCTGGTGAAAATCGGCACCACAGCGG
CGCAGAAAAAGCTGTTCTTCAATCTGCGGCGGGTCAAGAACCAGATTTCC
GCGCTGGAAGATGGCGACATGACCTCGGAACAGGTGACCCTGATCGCCAA
CCGACTGAACGTGCCTGAGCAGGAAGTCACCAATATGAACCAGCGCCTGG
CGGGCCAGGACAATTCGCTCAACGCGCCGCTGCGCATGGATGCGGAAGGC
GAATGGCAGGACTGGCTGGTCGATGACACGCCGGACCAGGAATCCGTGCT
GGGCGACAGCGAAGAGTTCAAACTGCGCCATAACTTGCTGGAGGATGCG
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