mRNA_P-wetherbeei_contig10801.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10801.1.1 vs. uniprot
Match: D7G240_ECTSI (Trafficking protein particle complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G240_ECTSI) HSP 1 Score: 218 bits (556), Expect = 1.940e-69 Identity = 105/144 (72.92%), Postives = 119/144 (82.64%), Query Frame = 3 Query: 81 MLYNFYIFNRKGKCLYYREWHRPQNTLSH--DAAEEQRLVFGMLYSLKELVNKMSADVDPEGLHTLKTDAYTLHHLETGSGLRFVLNTDSNAGNLRPSLRHLYSAVFVEHVVKSAAFDPKAGQPIVSPAFDAKLEEYLRSLTCF 506 M+YN YIFNRKGKCLYYREW+RPQNTL + D EEQRL+FGMLYSLKE+V KMS D GLH LKTD+YTLHHLETGSGLRFVLNTD+NAG+LRP+LR LYS +FVE+V K F+P G PI PAFD++LEEYLRSL CF Sbjct: 1 MIYNLYIFNRKGKCLYYREWNRPQNTLENAADDGEEQRLMFGMLYSLKEVVTKMSTDPASAGLHALKTDSYTLHHLETGSGLRFVLNTDNNAGDLRPTLRQLYSGIFVEYVAKHPQFNPVDGSPIRLPAFDSRLEEYLRSLACF 144
BLAST of mRNA_P-wetherbeei_contig10801.1.1 vs. uniprot
Match: A0A7S2AMS8_9STRA (Trafficking protein particle complex subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMS8_9STRA) HSP 1 Score: 189 bits (480), Expect = 6.200e-58 Identity = 88/143 (61.54%), Postives = 117/143 (81.82%), Query Frame = 3 Query: 81 MLYNFYIFNRKGKCLYYREWHRPQNTLS-HDAAEEQRLVFGMLYSLKELVNKMSADVDPEGLHTLKTDAYTLHHLETGSGLRFVLNTDSNAGNLRPSLRHLYSAVFVEHVVKSAAFDPKAGQPIVSPAFDAKLEEYLRSLTCF 506 M+YNFYIF+R+G CLYYREW+RP ++ S +DAAEE++LVFGML+S+KELV++MS+ EGLH LKT+ +TLHHLET SGLRFVLNTD + G+LRPSLRH++S++FVE+V+K+ +D + +PI SP F L YL SL+CF Sbjct: 1 MIYNFYIFDRRGTCLYYREWNRPYSSFSDYDAAEERKLVFGMLFSIKELVSRMSSRPGTEGLHCLKTNNFTLHHLETASGLRFVLNTDGDTGDLRPSLRHIFSSIFVEYVIKNPLYDRLSTEPIDSPLFSRHLGVYLESLSCF 143
BLAST of mRNA_P-wetherbeei_contig10801.1.1 vs. uniprot
Match: A0A835ZQ36_9STRA (Trafficking protein particle complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ36_9STRA) HSP 1 Score: 182 bits (462), Expect = 3.210e-55 Identity = 84/142 (59.15%), Postives = 107/142 (75.35%), Query Frame = 3 Query: 81 MLYNFYIFNRKGKCLYYREWHRPQNTLSHDAAEEQRLVFGMLYSLKELVNKMSADVDPEGLHTLKTDAYTLHHLETGSGLRFVLNTDSNAGNLRPSLRHLYSAVFVEHVVKSAAFDPKAGQPIVSPAFDAKLEEYLRSLTCF 506 M++NFYIFNR GKCL+Y+EW+RPQNTL HD EE+RL+FGMLYSL+ELV KM L + TD+YTL+ ET SGLRFVLNTD+ AG+L LRH+Y +FV+ VVK F+PKAG P+ P F+ +LE+Y++SL CF Sbjct: 1 MIFNFYIFNRNGKCLFYKEWNRPQNTLQHDDGEEKRLMFGMLYSLQELVGKMGGGDGKGALQSFTTDSYTLNFFETASGLRFVLNTDNRAGDLTAILRHIYGNIFVDLVVKHPMFEPKAGVPLQLPMFEEELEKYMKSLPCF 142
BLAST of mRNA_P-wetherbeei_contig10801.1.1 vs. uniprot
Match: A0A7S2RBL8_9STRA (Trafficking protein particle complex subunit n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBL8_9STRA) HSP 1 Score: 162 bits (410), Expect = 3.150e-47 Identity = 76/143 (53.15%), Postives = 104/143 (72.73%), Query Frame = 3 Query: 81 MLYNFYIFNRKGKCLYYREWHRPQNTLSHDAAEEQR-LVFGMLYSLKELVNKMSADVDPEGLHTLKTDAYTLHHLETGSGLRFVLNTDSNAGNLRPSLRHLYSAVFVEHVVKSAAFDPKAGQPIVSPAFDAKLEEYLRSLTCF 506 M+YN YIFNRKG CLYYREW RP N+ D +E+R LVFGML+S+KE+V++M+ GL +++T +TLHHLET +G RFVLNTD+ +LR +L+H+YS +FVE+V+K+ FDP I P FD+ L EY++ L+CF Sbjct: 1 MIYNLYIFNRKGVCLYYREWKRPFNSFPPDDQDEERKLVFGMLFSIKEMVSRMTPRTADAGLSSIQTGNFTLHHLETVTGFRFVLNTDTATTDLRQNLQHIYSEIFVEYVLKNPLFDPMTSTSIEIPLFDSNLSEYIQLLSCF 143
BLAST of mRNA_P-wetherbeei_contig10801.1.1 vs. uniprot
Match: A0A812VIE8_SYMMI (Trafficking protein particle complex subunit n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VIE8_SYMMI) HSP 1 Score: 156 bits (395), Expect = 3.880e-45 Identity = 67/139 (48.20%), Postives = 105/139 (75.54%), Query Frame = 3 Query: 81 MLYNFYIFNRKGKCLYYREWHRPQNTLSHDAAEEQRLVFGMLYSLKELVNKMSADVDPEGLHTLKTDAYTLHHLETGSGLRFVLNTDSNAGNLRPSLRHLYSAVFVEHVVKSAAFDPKAGQPIVSPAFDAKLEEYLRSL 497 M+YN YI++RKGKCL+Y+EW RP NTL+ D EE+RL+FGML+SLK+L K++ + P+GLHT+KT+AYTLHH E+ +G+ F++N+D + +L +L+H+Y+ +FVE V+++ + I P F+ KLE+Y+R++ Sbjct: 1 MIYNLYIYDRKGKCLFYKEWSRPMNTLADDPGEEKRLMFGMLFSLKDLAAKLAPSIGPQGLHTVKTNAYTLHHFESVTGMSFIMNSDPSLPDLYHNLQHIYNNIFVECVIRNPLYRHCPHDAIDCPLFEKKLEDYVRTI 139
BLAST of mRNA_P-wetherbeei_contig10801.1.1 vs. uniprot
Match: A0A4D9D8U8_9STRA (Trafficking protein particle complex subunit n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8U8_9STRA) HSP 1 Score: 146 bits (368), Expect = 6.080e-41 Identity = 73/147 (49.66%), Postives = 104/147 (70.75%), Query Frame = 3 Query: 81 MLYNFYIFNRKGKCLYYREWHRPQNTLSHDAAEEQRLVFGMLYSLKELVNKMSADVDP---EGLHTLKTDAYTLHHLETGSGLRFVLNTDSNAGNLRPSLRHLYSAVFVEHVVKSAAFDPKAGQPI--VSPAFDAKLEEYLRSLTCF 506 M+YN YIF+R+G CL+YREW RP NTL+ D EE++L+FGMLYS+K LV + + P +GL+ L+T+AYTLHH ET +GLRFVLNTD++ ++R LRH+YS ++V+HVV++ + G + PAF LE+Y+ +L F Sbjct: 1 MIYNLYIFDRRGACLFYREWCRPLNTLAEDPEEEKKLMFGMLYSIKGLVAALGSKNAPSSSDGLNHLRTNAYTLHHFETLTGLRFVLNTDNSIVDMRGHLRHIYSGIWVQHVVQNPQYKIGEGGSAGRLPPAFAQSLEQYVTNLPGF 147
BLAST of mRNA_P-wetherbeei_contig10801.1.1 vs. uniprot
Match: A0A7R9YCB9_9STRA (Trafficking protein particle complex subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCB9_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.430e-40 Identity = 72/154 (46.75%), Postives = 102/154 (66.23%), Query Frame = 3 Query: 57 PFGAAREAMLYNFYIFNRKGKCLYYREWHRPQNTLS--HDAAEEQRLVFGMLYSLKELVNKMSADVDPEG-----LHTLKTDAYTLHHLETGSGLRFVLNTDSNAGNLRPSLRHLYSAVFVEHVVKSAAFDPKAGQPIVSPAFDAKLEEYLRSL 497 P+ A + M++N YIF+R G CL+Y+EWHRP NTLS D E+ RL+FGML+SLKE+V KMS +G + ++T Y+ H ET +GLRFVLN D+ A +LR L +Y+ +FVE V+K+ +DP+ G P + F+ +LE YLR+L Sbjct: 28 PWLAQGQGMIFNMYIFSRSGSCLFYKEWHRPLNTLSGEEDPGEDARLMFGMLFSLKEIVGKMSGRSAEKGERREDIQVMRTSTYSTHLYETQTGLRFVLNVDAAAPSLRGELEEIYAGIFVEKVIKNPLYDPRDGPPEIPEDFEEELEAYLRAL 181
BLAST of mRNA_P-wetherbeei_contig10801.1.1 vs. uniprot
Match: A0A067CRD6_SAPPC (Trafficking protein particle complex subunit n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CRD6_SAPPC) HSP 1 Score: 143 bits (361), Expect = 6.690e-40 Identity = 69/146 (47.26%), Postives = 96/146 (65.75%), Query Frame = 3 Query: 81 MLYNFYIFNRKGKCLYYREWHRPQNTLS-HDAAEEQRLVFGMLYSLKELVNKMS---ADVDPEGLHTLKTDAYTLHHLETGSGLRFVLNTDSNAGNLRPSLRHLYSAVFVEHVVKSAAFDPKAGQPIVSPAFDAKLEEYLRSLTCF 506 M+YN YIFNR G CL Y EW+R + ++ DA EE+RL+FG+++SLKE + KM+ + + L T KTD YT HHLET SGLRF+L +D+N G+L+ L+HLY ++VE V K+ D K+ +PI F + Y+ SL CF Sbjct: 1 MIYNLYIFNRAGACLLYEEWNRSSDAMTLSDAEEEKRLMFGLIFSLKEFLRKMAPTASTTSSQSLKTFKTDTYTCHHLETASGLRFILTSDNNTGDLQDVLQHLYGNLYVELVTKNPVHDAKSTKPIKCKLFRHSVRHYMESLPCF 146
BLAST of mRNA_P-wetherbeei_contig10801.1.1 vs. uniprot
Match: A0A6A4ZH59_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZH59_9STRA) HSP 1 Score: 145 bits (367), Expect = 4.590e-39 Identity = 68/146 (46.58%), Postives = 101/146 (69.18%), Query Frame = 3 Query: 81 MLYNFYIFNRKGKCLYYREWHRPQNTLS-HDAAEEQRLVFGMLYSLKELVNKMSADVDPEGLHTLKT---DAYTLHHLETGSGLRFVLNTDSNAGNLRPSLRHLYSAVFVEHVVKSAAFDPKAGQPIVSPAFDAKLEEYLRSLTCF 506 M+YNFYIFNR G CL Y EW+R + ++ +DA EE+RL+FG+++SLKE + KMS H+LKT D YT HHLET SGLRF+L+TD+ +G+L+ +L+++Y ++VE V K+ D ++ +P+ F A ++ Y+ SL CF Sbjct: 17 MIYNFYIFNRSGACLMYEEWNRSNDAMTLNDAEEEKRLMFGLIFSLKEFLRKMSPPTSTPQTHSLKTFKTDVYTCHHLETPSGLRFILSTDNQSGDLQEALQYMYGNLYVELVTKNPVHDARSTKPVKCKLFRANIKAYIESLACF 162
BLAST of mRNA_P-wetherbeei_contig10801.1.1 vs. uniprot
Match: A0A7S3HIB3_9STRA (Trafficking protein particle complex subunit (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIB3_9STRA) HSP 1 Score: 140 bits (353), Expect = 7.450e-39 Identity = 65/135 (48.15%), Postives = 97/135 (71.85%), Query Frame = 3 Query: 81 MLYNFYIFNRKGKCLYYREWHRPQNTLSHDAAEEQRLVFGMLYSLKELVNKMSADVDP-EGLHTLKTDAYTLHHLETGSGLRFVLNTDSNAGNLRPSLRHLYSAVFVEHVVKSAAFDPKAGQPIVSPAFDAKLEE 482 M +NFYIFNRKGKCL+Y+EW RP N ++ D EE++LVFGML+SLK+L +K+S D + LHT+KT+A+TLHH ++ SGL FVLNT + + +L+H+YS +FVE + ++ + K +P+ F ++LE+ Sbjct: 1 MFHNFYIFNRKGKCLFYKEWDRPVNKMADDPEEEKKLVFGMLFSLKDLTSKLSPDGQGLDHLHTVKTNAFTLHHYQSPSGLMFVLNTHPDVADFHNNLQHVYSNIFVECIARNPLYKHKPDEPLKCALFVSRLED 135 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10801.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10801.1.1 >prot_P-wetherbeei_contig10801.1.1 ID=prot_P-wetherbeei_contig10801.1.1|Name=mRNA_P-wetherbeei_contig10801.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp MLYNFYIFNRKGKCLYYREWHRPQNTLSHDAAEEQRLVFGMLYSLKELVNback to top mRNA from alignment at P-wetherbeei_contig10801:1273..2264- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10801.1.1 ID=mRNA_P-wetherbeei_contig10801.1.1|Name=mRNA_P-wetherbeei_contig10801.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=992bp|location=Sequence derived from alignment at P-wetherbeei_contig10801:1273..2264- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10801:1273..2264- >mRNA_P-wetherbeei_contig10801.1.1 ID=mRNA_P-wetherbeei_contig10801.1.1|Name=mRNA_P-wetherbeei_contig10801.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig10801:1273..2264- (Phaeothamnion wetherbeei SAG_119_79)back to top |