mRNA_P-wetherbeei_contig10764.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10764.1.1 vs. uniprot
Match: D7G2H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H2_ECTSI) HSP 1 Score: 107 bits (266), Expect = 6.120e-25 Identity = 57/97 (58.76%), Postives = 68/97 (70.10%), Query Frame = 1 Query: 1 VPQSSPYQEPMRVMREAQEFVAQQLASDTTAAALEQWRDKFPWVDDNDS-KTYFELVCSLPACMKRLTLVASKTYARGLVFITVYFEGSLYVVMQVG 288 VP S Y++P+ ++ E QEFVAQ+LAS T L +W F W++D+ S TYFEL LPACM + LVA KTYARGLVFITVY EGS YVVMQ G Sbjct: 129 VPVDSVYRQPVVILAEVQEFVAQELASSRTTQELTKWSGAFHWINDDSSCSTYFELQAELPACMDEIALVACKTYARGLVFITVYQEGSFYVVMQEG 225
BLAST of mRNA_P-wetherbeei_contig10764.1.1 vs. uniprot
Match: A0A8J2S959_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S959_9STRA) HSP 1 Score: 102 bits (253), Expect = 3.560e-23 Identity = 50/96 (52.08%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 1 VPQSSPYQEPMRVMREAQEFVAQQLASDTTAAALEQWRDKFPWVDDNDSKTYFELVCSLPACMKRLTLVASKTYARGLVFITVYFEGSLYVVMQVG 288 VP S ++EPM + EA EF A++LASDT L +W D + W++++ + TYFE+ C P CM + L ASKTYARGLVFI VYF+ +LYVV+Q G Sbjct: 176 VPSESSFKEPMAFVNEAAEFAARELASDTVHDELRKWTDVYGWMENDQANTYFEIQCCPPPCMDGIALAASKTYARGLVFIAVYFDRALYVVVQDG 271
BLAST of mRNA_P-wetherbeei_contig10764.1.1 vs. uniprot
Match: A0A7S3HBV8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBV8_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.720e-21 Identity = 46/97 (47.42%), Postives = 69/97 (71.13%), Query Frame = 1 Query: 1 VPQSSPYQEPMRVMREAQEFVAQQLASDTTAAALEQWRDKFPWVDDNDSKTYFELVCSL-PACMKRLTLVASKTYARGLVFITVYFEGSLYVVMQVG 288 VP +S Y EP++ + +A EF+AQ+L S++ L + FPW+DD++S TYFEL SL PA M ++ ++ASKTY RGL+ I++Y EG++Y +MQ G Sbjct: 89 VPATSDYTEPLKFLEDASEFIAQELLSESVDKELRKMASVFPWIDDDNSSTYFELALSLVPAYMSKIKMIASKTYTRGLILISIYNEGTIYFIMQPG 185
BLAST of mRNA_P-wetherbeei_contig10764.1.1 vs. uniprot
Match: F0Y4X5_AURAN (Rad51 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4X5_AURAN) HSP 1 Score: 95.9 bits (237), Expect = 5.160e-21 Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 1 VPQSSPYQEPMRVMREAQEFVAQQLASDTTAAALEQWRDKFPWVDDNDSKTYFELVCSLPACMKRLTLVASKTYARGLVFITVYFEGSLYVVMQVG 288 VP S ++EPM + +A EF A +LAS L +W D + W++ + + TYFEL C+ P CM + L ASKTYARGLVFITVYFE + YVV+Q G Sbjct: 102 VPSESSFKEPMGFVGDASEFAAAELASARVHEELRKWTDIYTWMETDAANTYFELQCAPPPCMDGIALAASKTYARGLVFITVYFEKAFYVVVQDG 197
BLAST of mRNA_P-wetherbeei_contig10764.1.1 vs. uniprot
Match: A0A7S4D7F3_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7F3_HETAK) HSP 1 Score: 88.2 bits (217), Expect = 2.560e-18 Identity = 48/100 (48.00%), Postives = 65/100 (65.00%), Query Frame = 1 Query: 1 VPQSSPYQEPMRVMREAQEFVAQQLASDTTAAALEQWRDKFPWVDDNDSKTYFELVCSL--PAC--MKRLTLVASKTYARGLVFITVYFEGSLYVVMQVG 288 VP +S + P+++ A+EF+A +L SD +A LE+W F W+D + TYFEL C PAC M + +VASKTY RGLV ITV+ EG+ YVV+Q G Sbjct: 156 VPAASEFHRPLQLHWAAEEFLANELVSDKVSAELEKWSKVFAWIDGDSESTYFELGCQAGHPACAAMADVAVVASKTYCRGLVLITVWHEGAFYVVVQPG 255
BLAST of mRNA_P-wetherbeei_contig10764.1.1 vs. uniprot
Match: A0A7S3HC66_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HC66_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 5.970e-17 Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 1 Query: 1 VPQSSPYQEPMRVMREAQEFVAQQLASDTTAAALEQWRDKFPWVDDNDSKTYFELVCSL-PACMKRLTLVASKTYARGLVFI 243 VP +S Y EP++ + +A EF+AQ+L S++ L + FPW+DD++S TYFEL SL PA M ++ ++ASKTY RGL+ I Sbjct: 89 VPATSDYTEPLKFLEDASEFIAQELLSESVDKELRKMASVFPWIDDDNSSTYFELALSLVPAYMSKIKMIASKTYTRGLILI 170
BLAST of mRNA_P-wetherbeei_contig10764.1.1 vs. uniprot
Match: A0A482RZJ4_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZJ4_9ARCH) HSP 1 Score: 77.4 bits (189), Expect = 5.100e-16 Identity = 42/97 (43.30%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 1 VPQSSPYQEPMRVMREAQEFVAQQLASDTTAAALEQWRDKFPWVDDNDSKTYFEL-VCSLPACMKRLTLVASKTYARGLVFITVYFEGSLYVVMQVG 288 +P SS + P+R M + +F+A +LAS+ A L++ FPWV+D+++ TYFEL + P M+ + LV SKTYARGLV +T+Y +Y V+Q G Sbjct: 1 MPLSSEFHAPLRFMEGSLDFLAGELASEEVQAELQKMASVFPWVEDDEAATYFELSLAGPPDSMRGVRLVCSKTYARGLVLVTIYHGQHVYCVVQNG 97
BLAST of mRNA_P-wetherbeei_contig10764.1.1 vs. uniprot
Match: A0A6U1P8Q3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1P8Q3_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.750e-15 Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 1 VPQSSPYQEPMRVMREAQEFVAQQLASDTTAAALEQWRDKFPWVDDNDSKTYFELVCSLP--ACMKRLTLVASKTYARGLVFITVYFEGSLYVVMQVG 288 VP S + + + A+ FVA QLASD T A L +W + W++D+ + TYFEL +LP A ++ ++L+ASKTY+RGLV I +Y E S Y V+Q G Sbjct: 82 VPPQSEFHQALHHHWGAETFVADQLASDETMAELAKWGKIYTWINDDAASTYFELESALPRGASLQDVSLIASKTYSRGLVLIGIYHENSFYFVLQAG 179
BLAST of mRNA_P-wetherbeei_contig10764.1.1 vs. uniprot
Match: A0A7S4K9I0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K9I0_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 2.120e-14 Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 1 VPQSSPYQEPMRVMREAQEFVAQQLASDTTAAALEQWRDKFPWVDDNDSKTYFELVCSLPACMKRLTLVASKTYARGLVFITVYFEGSLYVVMQVG 288 +P SS + + +EAQ+F++ +L+ +E+W++ WVDDN+S TYFELV + + + +K Y RGLV +TVYFEG Y ++Q G Sbjct: 12 IPASSGFTRQLESFQEAQDFLSSELSHPHIIDKIEEWKEYHEWVDDNNS-TYFELVGDVSGSFNDVQCICAKRYIRGLVLVTVYFEGVFYTILQDG 106
BLAST of mRNA_P-wetherbeei_contig10764.1.1 vs. uniprot
Match: A0A7S2D1T8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D1T8_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 2.560e-13 Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 1 VPQSSPYQEPMRVMREAQEFVAQQLASDTTAAALEQWRDKFPWVDDNDSKTYFELVCSLPACMKRLTLVASKTYARGLVFITVYFEGSLYVVMQVG 288 +P S + +P+ + EA E+ A+ LASD + + W++D+ KT+FE+ + A M+ + LVASKTY RGL+FIT+YFEGS Y+ + G Sbjct: 120 IPAQSSFHQPVSNVYEASEYCARTLASDGILDQMAALASEHRWIEDDAEKTFFEIQADI-AGMEGIELVASKTYTRGLIFITIYFEGSFYISISEG 214 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10764.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10764.1.1 >prot_P-wetherbeei_contig10764.1.1 ID=prot_P-wetherbeei_contig10764.1.1|Name=mRNA_P-wetherbeei_contig10764.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=86bp MRVMREAQEFVAQQLASDTTAAALEQWRDKFPWVDDNDSKTYFELVCSLPback to top mRNA from alignment at P-wetherbeei_contig10764:115..661- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10764.1.1 ID=mRNA_P-wetherbeei_contig10764.1.1|Name=mRNA_P-wetherbeei_contig10764.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=547bp|location=Sequence derived from alignment at P-wetherbeei_contig10764:115..661- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10764:115..661- >mRNA_P-wetherbeei_contig10764.1.1 ID=mRNA_P-wetherbeei_contig10764.1.1|Name=mRNA_P-wetherbeei_contig10764.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=258bp|location=Sequence derived from alignment at P-wetherbeei_contig10764:115..661- (Phaeothamnion wetherbeei SAG_119_79)back to top |