mRNA_P-wetherbeei_contig10714.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10714.1.1
Unique NamemRNA_P-wetherbeei_contig10714.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10714.1.1 vs. uniprot
Match: I7LWZ1_TETTS (Protein arginine methyltransferase NDUFAF7 n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7LWZ1_TETTS)

HSP 1 Score: 82.0 bits (201), Expect = 1.680e-15
Identity = 48/141 (34.04%), Postives = 71/141 (50.35%), Query Frame = 1
Query:    4 FVPTGALRLLTALQTRLPQHFLIAADFDFFPPPELREPVRLELLAANAPLVAGFDSDAGRPVDFPTYLAVPGSADILFPTDFPRLARMYAAACGRPPTAVRVMKQREFVQRHGGAVLDRTRTAGGYNPLLEDFSNAAFLLS 426
            F+PT  L++L  + + +P H +I ADFD     E  +      +  NAP+V+   S +    DF TYL   G ADI FPTDF  L+ +Y   C +   A++  +  +   +   A      T  GYNPL EDF N +F ++
Sbjct:  325 FIPTFCLKVLKHINSNIPNHNVIFADFDMLKTAESAK------MGINAPIVSQKLSKSHEKKDFSTYLVQRGQADIFFPTDFRLLSHLYKQVCNKKGKAIKSYQFMDIYSKEKWA-----ETKSGYNPLKEDFENTSFFIT 454          
BLAST of mRNA_P-wetherbeei_contig10714.1.1 vs. uniprot
Match: B7FTC2_PHATC (Protein arginine methyltransferase NDUFAF7 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FTC2_PHATC)

HSP 1 Score: 80.1 bits (196), Expect = 6.470e-15
Identity = 53/146 (36.30%), Postives = 74/146 (50.68%), Query Frame = 1
Query:    1 AFVPTGALRLLTALQTRLPQHFLIAADFDFFPPPELREPV-----RLELLAANAPLVAGFDSDAGRPVDFPTYLAVPGSADILFPTDFPRLARMYAAACGRPPTAVRVMKQREFVQRHGGAVLDRTRT-AGGYNPLLEDFSNAAFL 420
            +++PT A  +L  L    P   L+ ADFD+ PPP+  +       R  + A+  P+V   D      VD   YL  P   DILFPT+F +LA     +   P   V+V KQ +F+Q  G   +DRTR+    Y+PLL DF N + L
Sbjct:  244 SWIPTVACGVLRHLPRERPNARLLLADFDWLPPPDRLQVEDNNWHRRSVWASGEPIVTSMDD-----VDHECYLQAPPCCDILFPTNFAKLAAFVQNSWTNPRMEVKVEKQADFLQTFGPTEVDRTRSWLTSYSPLLHDFGNCSVL 384          
BLAST of mRNA_P-wetherbeei_contig10714.1.1 vs. uniprot
Match: A0A7J7QM50_9CHLO (Type II protein arginine methyltransferase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QM50_9CHLO)

HSP 1 Score: 75.1 bits (183), Expect = 5.250e-13
Identity = 50/97 (51.55%), Postives = 59/97 (60.82%), Query Frame = 1
Query:    4 FVPTGALRLLTALQTRLPQHFLIAADFDFFPPPELREPVRLELLAANAPLVAGFDSDAGRPVDFPTYLAVPGSADILFPTDFPRLARMYAAACGRPP 294
            ++PT  L+LL  L T LPQH LIAADFD  P  ++  P R      NAPLV+G    AG  VD+ T L   G+ADI FPTDF  LA +YAAA  R P
Sbjct:  352 WLPTRCLQLLELLHTVLPQHTLIAADFDALP--DVVVPGR------NAPLVSGRQG-AGVTVDYDTVLVPWGAADIFFPTDFDSLASLYAAAAHRGP 439          
BLAST of mRNA_P-wetherbeei_contig10714.1.1 vs. uniprot
Match: A0A448YWS2_9STRA (Protein arginine methyltransferase NDUFAF7 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YWS2_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.190e-12
Identity = 60/170 (35.29%), Postives = 83/170 (48.82%), Query Frame = 1
Query:    4 FVPTGALRLLTALQTRLPQHFLIAADFDFFPPPEL-------------------REPVRL-ELLAANAPLVAGFDSDAGRPVDFPTYLAVPGSADILFPTDFPRLARMY----------AAACGRPPTAVRVMKQREFVQRHGGAVLDRTRT-AGGYNPLLEDFSNAAFL 420
            +VPT A  +L  +  +     L+ ADFD+ PPP+L                   ++ + L E LA  +P+V   D   GR  D  +YL+ P   DILFPTDF +LA             AA   RP   VRV KQ +F++R G   + +TR+   G+ PLL DFSN + L
Sbjct:  281 WVPTIACGVLDHVINQRSNLGLVMADFDWLPPPDLDITTNFDEEDDILLLSKDKKKQIALKETLARGSPIVTDMD---GR--DHESYLSAPSHCDILFPTDFQKLASFAKRSLSLTEATAANTPRPSQVVRVEKQSQFLERVGFGHVSKTRSWLTGHTPLLHDFSNCSVL 445          
BLAST of mRNA_P-wetherbeei_contig10714.1.1 vs. uniprot
Match: A0A383VLJ0_TETOB (Protein arginine methyltransferase NDUFAF7 n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VLJ0_TETOB)

HSP 1 Score: 72.8 bits (177), Expect = 3.150e-12
Identity = 49/97 (50.52%), Postives = 58/97 (59.79%), Query Frame = 1
Query:    4 FVPTGALRLLTALQTRLPQHFLIAADFDFFPPPELREPVRLELLAANAPLVAGFDSDAGRPVDFPTYLAVPGSADILFPTDFPRLARMYAAACGRPP 294
            ++PT  L+LL  L   LPQH LIAADFD  P  ++  P R      NAPLV+G    AG  VD+ T L   G+ADI FPTDF  LAR+YAAA    P
Sbjct:  363 WLPTRCLQLLELLHAVLPQHTLIAADFDALP--DVVVPGR------NAPLVSGRQG-AGVIVDYDTVLVPWGAADIFFPTDFDSLARLYAAAADSGP 450          
BLAST of mRNA_P-wetherbeei_contig10714.1.1 vs. uniprot
Match: A0A7S2XJL7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJL7_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 9.900e-12
Identity = 46/126 (36.51%), Postives = 65/126 (51.59%), Query Frame = 1
Query:   67 LIAADFDFFPPPELREPV-----RLELLAANAPLVAGFDSDAGRPVDFPTYLAVPGSADILFPTDFPRLARMYAAACGRPPTAVRVMKQREFVQRHGGAVLDRTRT-AGGYNPLLEDFSNAAFLLS 426
            ++ ADFD+ P P++         RL + A   P+V   D      +D   YL  P   DILFPTDFP+LA        R    V+ MKQ EF++  G   +  T++   GY+PL+EDF N + L+S
Sbjct:    1 MLLADFDWLPRPDILNTTGARRRRLSIEADGEPIVTCMDG-----LDHECYLNAPQHCDILFPTDFPKLAAFVEKHQQR--VKVQNMKQSEFLRSFGPEQVQATKSWLSGYSPLVEDFGNCSVLVS 119          
BLAST of mRNA_P-wetherbeei_contig10714.1.1 vs. uniprot
Match: A0A2T0FEQ4_9ASCO (Protein arginine methyltransferase NDUFAF7 n=1 Tax=Wickerhamiella sorbophila TaxID=45607 RepID=A0A2T0FEQ4_9ASCO)

HSP 1 Score: 67.4 bits (163), Expect = 2.360e-10
Identity = 45/141 (31.91%), Postives = 66/141 (46.81%), Query Frame = 1
Query:    4 FVPTGALRLLTALQTRLPQHFLIAADFDFFPPPELREPVRLELLAANAPLVAGFDSDAGRPVDFPTYLAVPGSADILFPTDFPRLARMYAAACGRPPTAVRVMKQREFVQRHGGAVLDRTRTAGGYNPLLEDFSNAAFLLS 426
            ++PT  L+ L  L  + P H L+A+DF  F            +    AP++  F    G P+  PTY+A+ G  DI+FPTDF   A++Y   C R   A       +F++         T T  G +P+L  + N AFL S
Sbjct:  379 YIPTRYLQFLNVLNAKFPNHKLLASDFTNFDE---------HISGYCAPVIQTFME--GMPITIPTYMALQGFFDIMFPTDFTFAAQLYEQVCNRKAIAT---SHGDFLKNWASK---ETSTRTGEDPMLSFYRNTAFLTS 502          
BLAST of mRNA_P-wetherbeei_contig10714.1.1 vs. uniprot
Match: R7QFD1_CHOCR (Protein arginine methyltransferase NDUFAF7 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFD1_CHOCR)

HSP 1 Score: 66.2 bits (160), Expect = 5.760e-10
Identity = 48/146 (32.88%), Postives = 73/146 (50.00%), Query Frame = 1
Query:    4 FVPTGALRLLTALQTRLPQHFLIAADFDFFPPPELREPVRLELLAANAPLVAGFDSDAGRPVDFPTYLAVP-GSADILFPTDFPRLARMYAAACGRPPTA----VRVMKQREFVQRHGG-AVLDRTRTAGGYNPLLEDFSNAAFLL 423
            +VPT + +LL A+ + L    +  +DF+ FP           L   NAP+V       G  V + +  A P G  DI+FPT+F  L R + +  G   +      R++ Q +F + H   A ++ T    GYNP+L+DF NA+FLL
Sbjct:  296 WVPTASYQLLKAISSSLSHAGMTISDFNSFPG---------ALPGENAPVVQRVQQ--GSTVVYESVTAAPFGKVDIMFPTNFHALQRCHNSFAGNGVSENSYLYRILSQEKFFEEHSSEASINATTCKDGYNPVLQDFENASFLL 430          
BLAST of mRNA_P-wetherbeei_contig10714.1.1 vs. uniprot
Match: L7IVW0_MAGOP (Protein arginine methyltransferase NDUFAF7 n=6 Tax=Pyricularia TaxID=48558 RepID=L7IVW0_MAGOP)

HSP 1 Score: 65.5 bits (158), Expect = 1.120e-9
Identity = 47/139 (33.81%), Postives = 65/139 (46.76%), Query Frame = 1
Query:    4 FVPTGALRLLTALQTRLPQHFLIAADFDFFPPPELREPVRLELLAANAPLVAGFDSDAGRPVDFPTYLAVPGSADILFPTDFPRLARMYAAACGRPPTAVRVMKQREFVQRHGGAVLDRTRTAGGYNPLLEDFSNAAFL 420
            ++PT  ++    L    P H L+ +DF + P               NAP+V        RPV   T L   G  DI+FPTDF  + +MY A  GR     RV    +F++R   A +D TRT  G NP+L  F NA+ +
Sbjct:  408 YIPTSLMQFFEVLDRYFPAHRLVTSDFHWLPD---------ATPGLNAPIVQ--TRYQRRPVPVTTPLVHQGYFDIMFPTDFTVMEKMYQAITGR---LSRVSTHEDFMRRW--AYVDETRTRSGENPMLSWFKNASVM 530          
BLAST of mRNA_P-wetherbeei_contig10714.1.1 vs. uniprot
Match: K0SS78_THAOC (Protein arginine methyltransferase NDUFAF7 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SS78_THAOC)

HSP 1 Score: 65.1 bits (157), Expect = 1.390e-9
Identity = 48/146 (32.88%), Postives = 73/146 (50.00%), Query Frame = 1
Query:    4 FVPTGALRLLTALQTRLPQHFLIAADFDFFPPPEL-REPVRLE--LLAANAPLVAGFDSDAGRPVDFPTYLAVPGSA--DILFPTDFPRLARMYAAACGRPPTAVRVMKQREFVQRHGGAVLDRTRTAGGYNPLLEDFSNAAFLLS 426
            +VPT AL  L  L    P   +  ADFD+ P  ++     R +  +L A   +     +D     D P YL  P  A  DIL+PTDF +LA   +        + + MKQ +F+ R+G A ++RTR   G++P++ DF N +  L+
Sbjct:  246 WVPTVALGFLMRLYECRPNSCVAFADFDWLPSADVGANSARQDGGILMAEPAIGDPIVTDMSG-ADHPCYLTSPPDAPCDILYPTDFAKLAAFASGLLSTDGLSCQHMKQSDFLLRYGKAEVNRTRGYTGFSPMIHDFGNTSVFLT 390          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10714.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
I7LWZ1_TETTS1.680e-1534.04Protein arginine methyltransferase NDUFAF7 n=1 Tax... [more]
B7FTC2_PHATC6.470e-1536.30Protein arginine methyltransferase NDUFAF7 n=2 Tax... [more]
A0A7J7QM50_9CHLO5.250e-1351.55Type II protein arginine methyltransferase n=1 Tax... [more]
A0A448YWS2_9STRA1.190e-1235.29Protein arginine methyltransferase NDUFAF7 n=1 Tax... [more]
A0A383VLJ0_TETOB3.150e-1250.52Protein arginine methyltransferase NDUFAF7 n=1 Tax... [more]
A0A7S2XJL7_9STRA9.900e-1236.51Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A2T0FEQ4_9ASCO2.360e-1031.91Protein arginine methyltransferase NDUFAF7 n=1 Tax... [more]
R7QFD1_CHOCR5.760e-1032.88Protein arginine methyltransferase NDUFAF7 n=1 Tax... [more]
L7IVW0_MAGOP1.120e-933.81Protein arginine methyltransferase NDUFAF7 n=6 Tax... [more]
K0SS78_THAOC1.390e-932.88Protein arginine methyltransferase NDUFAF7 n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10714contigP-wetherbeei_contig10714:1..426 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog36331.EPrPI00000023102
PFAMsMethyltransf_28
Model size426
Max annot lvl121069|Pythiales
Hectar predicted targeting categorymitochondrion
Exons1
Evalue3.35e-27
EggNOG OGs2CMRH@1|root,2QRKD@2759|Eukaryota,1MEGM@121069|Pythiales
DescriptionSource PGD
Cds size426
COG categoryH
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185881.938708-CDS-P-wetherbeei_contig10714:0..4261683185881.938708-CDS-P-wetherbeei_contig10714:0..426Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10714 1..426 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10714.1.1prot_P-wetherbeei_contig10714.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10714 1..426 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10714.1.1

>prot_P-wetherbeei_contig10714.1.1 ID=prot_P-wetherbeei_contig10714.1.1|Name=mRNA_P-wetherbeei_contig10714.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=142bp
AFVPTGALRLLTALQTRLPQHFLIAADFDFFPPPELREPVRLELLAANAP
LVAGFDSDAGRPVDFPTYLAVPGSADILFPTDFPRLARMYAAACGRPPTA
VRVMKQREFVQRHGGAVLDRTRTAGGYNPLLEDFSNAAFLLS
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mRNA from alignment at P-wetherbeei_contig10714:1..426+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10714.1.1 ID=mRNA_P-wetherbeei_contig10714.1.1|Name=mRNA_P-wetherbeei_contig10714.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=426bp|location=Sequence derived from alignment at P-wetherbeei_contig10714:1..426+ (Phaeothamnion wetherbeei SAG_119_79)
GCCTTTGTCCCAACCGGCGCTCTCCGGCTGCTGACGGCGCTCCAGACGCG GCTGCCTCAGCACTTCCTCATCGCCGCCGACTTCGACTTCTTCCCGCCGC CGGAGCTGCGAGAGCCCGTCCGCCTGGAACTGCTCGCCGCCAACGCCCCG TTGGTCGCCGGGTTCGATTCCGATGCCGGCCGTCCAGTCGACTTTCCGAC GTACCTCGCCGTTCCGGGCAGCGCCGACATTCTGTTCCCGACCGACTTCC CGCGGCTGGCGCGCATGTACGCGGCGGCGTGCGGGCGGCCGCCGACGGCG GTGCGAGTGATGAAACAGCGGGAATTTGTGCAACGGCACGGGGGCGCAGT GCTGGACCGAACGCGAACGGCCGGCGGCTACAATCCGCTGCTTGAAGACT TTTCCAACGCCGCATTTCTCTTATCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10714:1..426+

>mRNA_P-wetherbeei_contig10714.1.1 ID=mRNA_P-wetherbeei_contig10714.1.1|Name=mRNA_P-wetherbeei_contig10714.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=426bp|location=Sequence derived from alignment at P-wetherbeei_contig10714:1..426+ (Phaeothamnion wetherbeei SAG_119_79)
GCCTTTGTCCCAACCGGCGCTCTCCGGCTGCTGACGGCGCTCCAGACGCG
GCTGCCTCAGCACTTCCTCATCGCCGCCGACTTCGACTTCTTCCCGCCGC
CGGAGCTGCGAGAGCCCGTCCGCCTGGAACTGCTCGCCGCCAACGCCCCG
TTGGTCGCCGGGTTCGATTCCGATGCCGGCCGTCCAGTCGACTTTCCGAC
GTACCTCGCCGTTCCGGGCAGCGCCGACATTCTGTTCCCGACCGACTTCC
CGCGGCTGGCGCGCATGTACGCGGCGGCGTGCGGGCGGCCGCCGACGGCG
GTGCGAGTGATGAAACAGCGGGAATTTGTGCAACGGCACGGGGGCGCAGT
GCTGGACCGAACGCGAACGGCCGGCGGCTACAATCCGCTGCTTGAAGACT
TTTCCAACGCCGCATTTCTCTTATCC
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