mRNA_P-wetherbeei_contig1069.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1069.2.1
Unique NamemRNA_P-wetherbeei_contig1069.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1069.2.1 vs. uniprot
Match: A0A0S8AZU2_9PROT (Nitric oxide synthase n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8AZU2_9PROT)

HSP 1 Score: 258 bits (658), Expect = 4.110e-86
Identity = 127/156 (81.41%), Postives = 137/156 (87.82%), Query Frame = 1
Query:    1 MKLTILVGTMTGTAQLVAQELELAWDGDGVSVETLLMDDLDAAVFSRDGVFLVCTSTYGQGDVPDNSKKFYEDLQAKRPDLSGVRYGVFGLGDRTYAETFNFGGMKFDVLLGELGAQRIGERVQHDASSGVLPEEKAEEWAAGWLEQAREAAAQTA 468
            MK+ +LVGTMTGTAQLVAQELEL WD     VETLLMD LDA VF+R+GVFL+CTSTYGQGDVPDN+KK YEDL+AKRPDLS +RYGVFGLGDRTYAETFNFGG +FD LL ELGAQR+GERVQHDASSGVLPEE A EW AGWLEQAR A AQTA
Sbjct:    1 MKINVLVGTMTGTAQLVAQELELTWDDGETQVETLLMDGLDAGVFAREGVFLICTSTYGQGDVPDNAKKLYEDLRAKRPDLSQLRYGVFGLGDRTYAETFNFGGKRFDDLLAELGAQRVGERVQHDASSGVLPEEAAAEWGAGWLEQARAATAQTA 156          
BLAST of mRNA_P-wetherbeei_contig1069.2.1 vs. uniprot
Match: A0A1F3YRM9_9PROT (Flavodoxin-like domain-containing protein n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YRM9_9PROT)

HSP 1 Score: 241 bits (615), Expect = 1.520e-79
Identity = 119/152 (78.29%), Postives = 133/152 (87.50%), Query Frame = 1
Query:    1 MKLTILVGTMTGTAQLVAQELELAWDGDGVSVETLLMDDLDAAVFSRDGVFLVCTSTYGQGDVPDNSKKFYEDLQAKRPDLSGVRYGVFGLGDRTYAETFNFGGMKFDVLLGELGAQRIGERVQHDASSGVLPEEKAEEWAAGWLEQAREAA 456
            MKLT+LVGTMTGTAQLVAQELEL WD   + VETLLMD LD++VF+RDGVFL+ TSTYGQGDVPDN+K  YEDL+AKRPDLS VRYGVFGLGDRTYAETFNFGG +FD LLGELGA+RIGERVQHDA+SGVLPEE A +W  GW+  A+ AA
Sbjct:    1 MKLTLLVGTMTGTAQLVAQELELVWDDGEMHVETLLMDQLDSSVFARDGVFLLVTSTYGQGDVPDNAKALYEDLKAKRPDLSRVRYGVFGLGDRTYAETFNFGGKRFDELLGELGARRIGERVQHDAASGVLPEEMATQWGEGWIALAKGAA 152          
BLAST of mRNA_P-wetherbeei_contig1069.2.1 vs. uniprot
Match: A0A1F4ARH8_9PROT (Flavodoxin-like domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4ARH8_9PROT)

HSP 1 Score: 236 bits (602), Expect = 1.400e-77
Identity = 119/156 (76.28%), Postives = 130/156 (83.33%), Query Frame = 1
Query:    1 MKLTILVGTMTGTAQLVAQELELAWDGDGVSVETLLMDDLDAAVFSRDGVFLVCTSTYGQGDVPDNSKKFYEDLQAKRPDLSGVRYGVFGLGDRTYAETFNFGGMKFDVLLGELGAQRIGERVQHDASSGVLPEEKAEEWAAGWLEQAREAAAQTA 468
            MK+TILVGTMTGTAQLVAQELELAW  D   VETLLM++ D +VF RDGV L+CTSTYGQGDVPDN+K  YE+L+ +RPDLS VRYGVFGLGDRTYAETFNFGG +FD LL  LGA+RIGERVQHDASSGVL EE AEEW A WL  AREAA   A
Sbjct:    1 MKITILVGTMTGTAQLVAQELELAWGDDDTQVETLLMENADPSVFQRDGVTLICTSTYGQGDVPDNAKALYEELRTERPDLSQVRYGVFGLGDRTYAETFNFGGKRFDELLAGLGARRIGERVQHDASSGVLAEETAEEWGAEWLTLAREAAGHAA 156          
BLAST of mRNA_P-wetherbeei_contig1069.2.1 vs. uniprot
Match: A0A522VUT8_9PROT (Nitric oxide synthase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A522VUT8_9PROT)

HSP 1 Score: 236 bits (602), Expect = 1.400e-77
Identity = 116/151 (76.82%), Postives = 127/151 (84.11%), Query Frame = 1
Query:    1 MKLTILVGTMTGTAQLVAQELELAWDGDGVSVETLLMDDLDAAVFSRDGVFLVCTSTYGQGDVPDNSKKFYEDLQAKRPDLSGVRYGVFGLGDRTYAETFNFGGMKFDVLLGELGAQRIGERVQHDASSGVLPEEKAEEWAAGWLEQAREA 453
            M +TILVGTMTGTAQLVAQELELAW  DG  VETLLM+  D + F R+GV L+CTSTYGQGDVPDN+K  Y +LQAKRPDL G+RYGVFGLGDRTYAETFNFGG +FD LL ELGAQRIGERVQHDASSG+L EE A EW A WL+ AREA
Sbjct:    1 MNITILVGTMTGTAQLVAQELELAWGDDGTQVETLLMEKADLSAFGREGVVLICTSTYGQGDVPDNAKALYAELQAKRPDLVGLRYGVFGLGDRTYAETFNFGGKRFDELLAELGAQRIGERVQHDASSGILAEEAAAEWGAEWLKLAREA 151          
BLAST of mRNA_P-wetherbeei_contig1069.2.1 vs. uniprot
Match: A0A521YKQ4_9PROT (Nitric oxide synthase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YKQ4_9PROT)

HSP 1 Score: 230 bits (587), Expect = 2.890e-75
Identity = 114/149 (76.51%), Postives = 125/149 (83.89%), Query Frame = 1
Query:    4 KLTILVGTMTGTAQLVAQELELAWDGDGVSVETLLMDDLDAAVFSRDGVFLVCTSTYGQGDVPDNSKKFYEDLQAKRPDLSGVRYGVFGLGDRTYAETFNFGGMKFDVLLGELGAQRIGERVQHDASSGVLPEEKAEEWAAGWLEQARE 450
            K+TILVGTMTGTAQL AQE+ELA D     VETLLMD LD++VF R GVFLVCTSTYGQGDVPDN+K  YEDL+AKRPDLS VRYGVFGLGDRTYAETFNFGG +FD +LG+LGAQR+GER  HDASSGVLPEE A EW   WL Q +E
Sbjct:    4 KITILVGTMTGTAQLCAQEMELALDDGETQVETLLMDKLDSSVFERAGVFLVCTSTYGQGDVPDNAKALYEDLKAKRPDLSHVRYGVFGLGDRTYAETFNFGGKRFDEILGQLGAQRVGERHTHDASSGVLPEETALEWCQNWLAQVKE 152          
BLAST of mRNA_P-wetherbeei_contig1069.2.1 vs. uniprot
Match: A0A1F4F546_9PROT (Flavodoxin-like domain-containing protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4F546_9PROT)

HSP 1 Score: 230 bits (586), Expect = 3.840e-75
Identity = 114/151 (75.50%), Postives = 127/151 (84.11%), Query Frame = 1
Query:    1 MKLTILVGTMTGTAQLVAQELELAWDGDGVSVETLLMDDLDAAVFSRDGVFLVCTSTYGQGDVPDNSKKFYEDLQAKRPDLSGVRYGVFGLGDRTYAETFNFGGMKFDVLLGELGAQRIGERVQHDASSGVLPEEKAEEWAAGWLEQAREA 453
            MK+TI+VGTMTGTAQLVAQELEL WD     V T+LM+  D +VF  +GVFL+CTSTYGQGDVPDN+K  Y +LQAKRPDLS +RYGVFGLGDRTYAETFNFGG +FD LL ELGAQRIGERVQHDASSGVL EE A EWAA WL+ AR+A
Sbjct:    1 MKITIVVGTMTGTAQLVAQELELTWDDGETRVATVLMEKTDVSVFGGEGVFLICTSTYGQGDVPDNAKALYAELQAKRPDLSQLRYGVFGLGDRTYAETFNFGGKRFDELLAELGAQRIGERVQHDASSGVLAEEAAVEWAAEWLKLARDA 151          
BLAST of mRNA_P-wetherbeei_contig1069.2.1 vs. uniprot
Match: A0A1F4EK06_9PROT (Nitric oxide synthase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4EK06_9PROT)

HSP 1 Score: 224 bits (572), Expect = 7.250e-73
Identity = 109/149 (73.15%), Postives = 126/149 (84.56%), Query Frame = 1
Query:    4 KLTILVGTMTGTAQLVAQELELAWDGDGVSVETLLMDDLDAAVFSRDGVFLVCTSTYGQGDVPDNSKKFYEDLQAKRPDLSGVRYGVFGLGDRTYAETFNFGGMKFDVLLGELGAQRIGERVQHDASSGVLPEEKAEEWAAGWLEQARE 450
            K+TILVGTMTGTAQL AQE+ELA D     VETLLMD+LD++VF R+GVFLVCTSTYGQGDVPDN++  YEDL+AKRP+L+ VRYGVFGLGDRTYAETFNFGG +FD +L +LGAQR+GER  HDASSGV+PEE A EW   WL + RE
Sbjct:    4 KITILVGTMTGTAQLCAQEMELALDDGETQVETLLMDNLDSSVFEREGVFLVCTSTYGQGDVPDNARALYEDLKAKRPNLAHVRYGVFGLGDRTYAETFNFGGKRFDEILSQLGAQRVGERHMHDASSGVMPEETALEWCQDWLGRVRE 152          
BLAST of mRNA_P-wetherbeei_contig1069.2.1 vs. uniprot
Match: A0A537BGA6_9PROT (Nitric oxide synthase n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BGA6_9PROT)

HSP 1 Score: 224 bits (570), Expect = 1.050e-72
Identity = 110/145 (75.86%), Postives = 125/145 (86.21%), Query Frame = 1
Query:    1 MKLTILVGTMTGTAQLVAQELELAWDGDGVSVETLLMDDLDAAVFSRDGVFLVCTSTYGQGDVPDNSKKFYEDLQAKRPDLSGVRYGVFGLGDRTYAETFNFGGMKFDVLLGELGAQRIGERVQHDASSGVLPEEKAEEWAAGWL 435
            MK++ILVGTMTGTAQL AQE+ELA D     VETLLMD LD++VFSR+GVFL+CTSTYGQGDVPDN+K  Y+DL+A+RP+LSGVRYGVFGLGDRTYAETFNFGG +FD +L ELGA RIGER +HDASSGVLPEE A EW   WL
Sbjct:    1 MKISILVGTMTGTAQLCAQEMELALDDGDNRVETLLMDQLDSSVFSREGVFLICTSTYGQGDVPDNAKALYDDLRARRPNLSGVRYGVFGLGDRTYAETFNFGGKRFDDILTELGATRIGERHRHDASSGVLPEETALEWCQQWL 145          
BLAST of mRNA_P-wetherbeei_contig1069.2.1 vs. uniprot
Match: A0A1F4F7V8_9PROT (Flavodoxin-like domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4F7V8_9PROT)

HSP 1 Score: 221 bits (562), Expect = 1.790e-71
Identity = 112/157 (71.34%), Postives = 128/157 (81.53%), Query Frame = 1
Query:    1 MKLTILVGTMTGTAQLVAQELELAWDGDGVSVETLLMDDLDAAVFSR-DGVFLVCTSTYGQGDVPDNSKKFYEDLQAKRPDLSGVRYGVFGLGDRTYAETFNFGGMKFDVLLGELGAQRIGERVQHDASSGVLPEEKAEEWAAGWLEQAREAAAQTA 468
            MKL ILVGTMTGTAQL AQE+ELA DGDGV VETL+MD L  +VF+R + V+L+CTSTYGQGDVPDN+K FY+ L ++RP L GVRYGVFGLGDRTY ETFNFGG +FD +L ELGA+RIGER  HDASSG LPEE A EWA  WLE+ RE  +Q A
Sbjct:    1 MKLAILVGTMTGTAQLCAQEIELALDGDGVQVETLMMDKLHPSVFARRERVYLICTSTYGQGDVPDNAKAFYQALCSERPGLGGVRYGVFGLGDRTYVETFNFGGKRFDDILSELGAERIGERYTHDASSGTLPEELAVEWARKWLEKVRERLSQPA 157          
BLAST of mRNA_P-wetherbeei_contig1069.2.1 vs. uniprot
Match: A0A537ACY1_9PROT (Nitric oxide synthase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537ACY1_9PROT)

HSP 1 Score: 219 bits (557), Expect = 1.110e-70
Identity = 105/149 (70.47%), Postives = 122/149 (81.88%), Query Frame = 1
Query:    4 KLTILVGTMTGTAQLVAQELELAWDGDGVSVETLLMDDLDAAVFSRDGVFLVCTSTYGQGDVPDNSKKFYEDLQAKRPDLSGVRYGVFGLGDRTYAETFNFGGMKFDVLLGELGAQRIGERVQHDASSGVLPEEKAEEWAAGWLEQARE 450
            K+ IL+GTMTGTAQL AQE+ELA   D   VE LLMD+LD +VF RDG FL+CTSTYGQGDVPDN++  YEDLQ KRPDLS VRYGVFGLGDRTYAETFN+GG +FD +L ELGA+R+GER +HDASSGVLPEE A EW   W+ + +E
Sbjct:    5 KIIILIGTMTGTAQLCAQEMELALGDDETQVEALLMDNLDVSVFDRDGAFLICTSTYGQGDVPDNARALYEDLQRKRPDLSKVRYGVFGLGDRTYAETFNYGGKRFDDILTELGARRVGERYKHDASSGVLPEETAVEWCQEWVSKLQE 153          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1069.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0S8AZU2_9PROT4.110e-8681.41Nitric oxide synthase n=1 Tax=Betaproteobacteria b... [more]
A0A1F3YRM9_9PROT1.520e-7978.29Flavodoxin-like domain-containing protein n=1 Tax=... [more]
A0A1F4ARH8_9PROT1.400e-7776.28Flavodoxin-like domain-containing protein n=1 Tax=... [more]
A0A522VUT8_9PROT1.400e-7776.82Nitric oxide synthase n=2 Tax=Betaproteobacteria b... [more]
A0A521YKQ4_9PROT2.890e-7576.51Nitric oxide synthase n=1 Tax=Betaproteobacteria b... [more]
A0A1F4F546_9PROT3.840e-7575.50Flavodoxin-like domain-containing protein n=2 Tax=... [more]
A0A1F4EK06_9PROT7.250e-7373.15Nitric oxide synthase n=1 Tax=Betaproteobacteria b... [more]
A0A537BGA6_9PROT1.050e-7275.86Nitric oxide synthase n=3 Tax=Betaproteobacteria b... [more]
A0A1F4F7V8_9PROT1.790e-7171.34Flavodoxin-like domain-containing protein n=1 Tax=... [more]
A0A537ACY1_9PROT1.110e-7070.47Nitric oxide synthase n=1 Tax=Betaproteobacteria b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1069contigP-wetherbeei_contig1069:2399..2869 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1380394.JADL01000003_gene5180
PFAMsFlavodoxin_1
Model size471
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.28e-52
EggNOG OGsCOG0369@1|root,COG0369@2|Bacteria,1QUX0@1224|Proteobacteria,2U85Q@28211|Alphaproteobacteria,2JXR2@204441|Rhodospirillales
DescriptionFlavodoxin
Cds size471
COG categoryP
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185880.8716252-CDS-P-wetherbeei_contig1069:2398..28691683185880.8716252-CDS-P-wetherbeei_contig1069:2398..2869Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1069 2399..2869 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1069.2.1prot_P-wetherbeei_contig1069.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1069 2399..2869 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1069.2.1

>prot_P-wetherbeei_contig1069.2.1 ID=prot_P-wetherbeei_contig1069.2.1|Name=mRNA_P-wetherbeei_contig1069.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=157bp
MKLTILVGTMTGTAQLVAQELELAWDGDGVSVETLLMDDLDAAVFSRDGV
FLVCTSTYGQGDVPDNSKKFYEDLQAKRPDLSGVRYGVFGLGDRTYAETF
NFGGMKFDVLLGELGAQRIGERVQHDASSGVLPEEKAEEWAAGWLEQARE
AAAQTA*
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mRNA from alignment at P-wetherbeei_contig1069:2399..2869-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1069.2.1 ID=mRNA_P-wetherbeei_contig1069.2.1|Name=mRNA_P-wetherbeei_contig1069.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig1069:2399..2869- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACTCACCATCCTCGTCGGCACCATGACCGGCACCGCCCAGCTCGT CGCGCAGGAGCTCGAACTCGCGTGGGACGGCGACGGCGTGTCTGTCGAAA CCCTGTTGATGGACGACCTCGATGCGGCGGTGTTTTCGCGCGACGGCGTG TTCCTCGTCTGCACGTCCACGTACGGCCAGGGCGACGTGCCGGATAATTC GAAGAAGTTCTACGAAGACCTGCAGGCGAAGCGCCCGGACCTGTCCGGCG TGCGCTACGGCGTGTTCGGCCTCGGCGACCGGACGTACGCAGAGACGTTC AACTTCGGCGGCATGAAGTTCGATGTGCTGCTCGGCGAACTCGGCGCGCA GCGGATCGGCGAGCGCGTGCAGCACGACGCGTCCTCAGGCGTGCTGCCCG AGGAAAAGGCGGAAGAGTGGGCCGCAGGTTGGCTGGAACAGGCAAGGGAA GCGGCGGCGCAGACCGCGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1069:2399..2869-

>mRNA_P-wetherbeei_contig1069.2.1 ID=mRNA_P-wetherbeei_contig1069.2.1|Name=mRNA_P-wetherbeei_contig1069.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig1069:2399..2869- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACTCACCATCCTCGTCGGCACCATGACCGGCACCGCCCAGCTCGT
CGCGCAGGAGCTCGAACTCGCGTGGGACGGCGACGGCGTGTCTGTCGAAA
CCCTGTTGATGGACGACCTCGATGCGGCGGTGTTTTCGCGCGACGGCGTG
TTCCTCGTCTGCACGTCCACGTACGGCCAGGGCGACGTGCCGGATAATTC
GAAGAAGTTCTACGAAGACCTGCAGGCGAAGCGCCCGGACCTGTCCGGCG
TGCGCTACGGCGTGTTCGGCCTCGGCGACCGGACGTACGCAGAGACGTTC
AACTTCGGCGGCATGAAGTTCGATGTGCTGCTCGGCGAACTCGGCGCGCA
GCGGATCGGCGAGCGCGTGCAGCACGACGCGTCCTCAGGCGTGCTGCCCG
AGGAAAAGGCGGAAGAGTGGGCCGCAGGTTGGCTGGAACAGGCAAGGGAA
GCGGCGGCGCAGACCGCGTAG
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