mRNA_P-wetherbeei_contig10636.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10636.1.1 vs. uniprot
Match: A0A835ZGF0_9STRA (Putative GOT1-membrane protein required for ER to Golgi transport n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGF0_9STRA) HSP 1 Score: 204 bits (518), Expect = 3.140e-65 Identity = 105/141 (74.47%), Postives = 125/141 (88.65%), Query Frame = 1 Query: 16 MDDNKKIGTGLLILGFIFIFLGVVLFFDAGLLAIGDILFLTGITLTIGLQRTLVFFFKRKQLRGNLFFFGGIILVLLRWAFIGLVLQVFGFLNLFGPFIPIAVEAMRSTPVLGSILALPGISGMVDKLAGR-----RRAPV 423 +DDNKK+GTGLLILGF+F+F+GV+LFFDA LLA+GD+LFLTGIT+TIG +RT VFFFKRKQLRGNLFFFGGI+LVL+RWAF+G++LQV GFLNLFGPFIPIAV AMR+ PV+G ILALP IS +VD++AG RR PV Sbjct: 3 LDDNKKMGTGLLILGFVFLFMGVILFFDANLLALGDVLFLTGITMTIGARRTFVFFFKRKQLRGNLFFFGGILLVLVRWAFVGMILQVLGFLNLFGPFIPIAVAAMRTLPVIGDILALPVISPLVDRIAGSQQNTDRRPPV 143
BLAST of mRNA_P-wetherbeei_contig10636.1.1 vs. uniprot
Match: F0WY71_9STRA (Vesicle transporter GOT1Blike protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0WY71_9STRA) HSP 1 Score: 157 bits (397), Expect = 7.390e-47 Identity = 84/133 (63.16%), Postives = 105/133 (78.95%), Query Frame = 1 Query: 19 DDNKKIGTGLLILGFIFIFLGVVLFFDAGLLAIGDILFLTGITLTIGLQRTLVFFFKRKQLRGNLFFFGGIILVLLRWAFIGLVLQVFGFLNLFGPFIPIAVEAMRSTPVLGSILALPGISGMVDKLAGRRRA 417 DDN+KIGT LL +GF F+ LGV+LFFDA LLA+GDIL L+G+ LTIG QRT+ FF +R++ RG L F GGIILV+LRW +G+VLQ FGFLNLFG F P+AV MR P+LG+IL LPGI +VD+LAG ++ Sbjct: 4 DDNRKIGTLLLGIGFGFLLLGVILFFDAALLALGDILLLSGVALTIGFQRTIRFFTRRERWRGILCFLGGIILVMLRWPVVGMVLQSFGFLNLFGSFFPVAVAFMRQMPILGTILNLPGIRSVVDRLAGSTKS 136
BLAST of mRNA_P-wetherbeei_contig10636.1.1 vs. uniprot
Match: K3X7C2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7C2_GLOUD) HSP 1 Score: 153 bits (386), Expect = 3.370e-45 Identity = 80/130 (61.54%), Postives = 106/130 (81.54%), Query Frame = 1 Query: 16 MDDNKKIGTGLLILGFIFIFLGVVLFFDAGLLAIGDILFLTGITLTIGLQRTLVFFFKRKQLRGNLFFFGGIILVLLRWAFIGLVLQVFGFLNLFGPFIPIAVEAMRSTPVLGSILALPGISGMVDKLAG 405 +DDN+KIGT LL +GF+FI LGV+LFFDA LLA+GD+LFL G+ LTIGL RT+ FF ++++ RG + F GGI+LV+LR+ IG+++Q FGFLNLFG F P+AV +R TPV+GS+L LP IS +VD+LAG Sbjct: 2 LDDNRKIGTLLLGIGFVFIMLGVLLFFDAALLALGDVLFLCGLALTIGLTRTIRFFTRKERWRGIVCFLGGIVLVMLRYPIIGMIIQSFGFLNLFGSFFPVAVAFLRQTPVVGSVLNLPVISDVVDRLAG 131
BLAST of mRNA_P-wetherbeei_contig10636.1.1 vs. uniprot
Match: A0A067CE71_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CE71_SAPPC) HSP 1 Score: 152 bits (384), Expect = 6.780e-45 Identity = 80/133 (60.15%), Postives = 106/133 (79.70%), Query Frame = 1 Query: 16 MDDNKKIGTGLLILGFIFIFLGVVLFFDAGLLAIGDILFLTGITLTIGLQRTLVFFFKRKQLRGNLFFFGGIILVLLRWAFIGLVLQVFGFLNLFGPFIPIAVEAMRSTPVLGSILALPGISGMVDKLAGRRR 414 MDDN+KIGT LL +GF+F+FLGV+LFFDA LLAIGD+LFL+G+ +TIGL RT+ FF ++ + RG + F GGI LV++R+ IG+ +Q FGFLNLFG F P+AV +R TPVLG++L LP I +VDKLAG ++ Sbjct: 2 MDDNRKIGTLLLGVGFLFLFLGVMLFFDAALLAIGDVLFLSGLAMTIGLSRTIKFFTRKDRWRGIVCFLGGIFLVMIRYPIIGMCVQSFGFLNLFGSFFPVAVAFLRQTPVLGTVLNLPVIGDIVDKLAGAQK 134
BLAST of mRNA_P-wetherbeei_contig10636.1.1 vs. uniprot
Match: A0A5D6XZN9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZN9_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.940e-44 Identity = 81/130 (62.31%), Postives = 105/130 (80.77%), Query Frame = 1 Query: 16 MDDNKKIGTGLLILGFIFIFLGVVLFFDAGLLAIGDILFLTGITLTIGLQRTLVFFFKRKQLRGNLFFFGGIILVLLRWAFIGLVLQVFGFLNLFGPFIPIAVEAMRSTPVLGSILALPGISGMVDKLAG 405 +DDN+KIGT LL +GF F+ LGV+LFFDA LLA+GD+LFL G+ LTIGL RT+ FF +R++ RG + F GGI+LVLLR+ IG+ LQ FGFLNLFG F P+AV +R TPV+G++L+LP IS +VD+LAG Sbjct: 2 LDDNRKIGTLLLGVGFAFLLLGVLLFFDAALLALGDVLFLCGLALTIGLSRTVRFFTRRERWRGIVCFLGGILLVLLRFPIIGMALQSFGFLNLFGSFFPVAVAFLRQTPVVGNVLSLPVISDVVDRLAG 131
BLAST of mRNA_P-wetherbeei_contig10636.1.1 vs. uniprot
Match: H3G8V1_PHYRM (Uncharacterized protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3G8V1_PHYRM) HSP 1 Score: 150 bits (380), Expect = 2.750e-44 Identity = 77/133 (57.89%), Postives = 108/133 (81.20%), Query Frame = 1 Query: 16 MDDNKKIGTGLLILGFIFIFLGVVLFFDAGLLAIGDILFLTGITLTIGLQRTLVFFFKRKQLRGNLFFFGGIILVLLRWAFIGLVLQVFGFLNLFGPFIPIAVEAMRSTPVLGSILALPGISGMVDKLAGRRR 414 +DDN+KIGT LL LGF F+ LGV++FFDA +LA+GD+LFL+G+ LTIGL RT+ FF ++++ RG + F GGI+LV+LR+ IG+++Q FGFLNLFG F P+AV +R TPV+G++L LP IS +VD+LAG ++ Sbjct: 2 LDDNRKIGTLLLGLGFAFLLLGVLMFFDAAMLALGDVLFLSGVALTIGLSRTVRFFTRKERWRGIVCFLGGILLVMLRYPMIGMIIQSFGFLNLFGSFFPVAVAFLRQTPVIGNVLNLPVISDIVDRLAGAQK 134
BLAST of mRNA_P-wetherbeei_contig10636.1.1 vs. uniprot
Match: A0A485LD29_9STRA (Aste57867_19031 protein n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A485LD29_9STRA) HSP 1 Score: 150 bits (378), Expect = 5.710e-44 Identity = 79/134 (58.96%), Postives = 104/134 (77.61%), Query Frame = 1 Query: 13 RMDDNKKIGTGLLILGFIFIFLGVVLFFDAGLLAIGDILFLTGITLTIGLQRTLVFFFKRKQLRGNLFFFGGIILVLLRWAFIGLVLQVFGFLNLFGPFIPIAVEAMRSTPVLGSILALPGISGMVDKLAGRRR 414 DDN+KIGT LL LGF+F+FLGV+LFFD+ LLAIGD+LFL+G+ LTIGL RT+ FF + ++ RG + F GGI+LV+ R+ IG+ +Q FGFLNLFG F P+AV +R TPV+G +L LP I +VDKLAG ++ Sbjct: 2 NFDDNRKIGTLLLGLGFLFLFLGVMLFFDSALLAIGDVLFLSGLALTIGLTRTIKFFTRPERWRGIVCFLGGIVLVMFRYPIIGMCVQTFGFLNLFGSFFPVAVAFLRQTPVIGPVLNLPVIGDVVDKLAGAQK 135
BLAST of mRNA_P-wetherbeei_contig10636.1.1 vs. uniprot
Match: A0A6H5JZM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZM1_9PHAE) HSP 1 Score: 149 bits (377), Expect = 8.350e-44 Identity = 83/140 (59.29%), Postives = 101/140 (72.14%), Query Frame = 1 Query: 16 MDDNKKIGTGLLILGFIFIFLGVVLFFDAGLLAIGDILFLTGITLTIGLQRTLVFFFKRKQLRGNLFFFGGIILVLLRWAFIGLVLQVFGFLNLFGPFIPIAVEAMRSTPVLGSILALPGISGMVDKLAGR----RRAPV 423 + DN++IG GLL LG IF+ LGV++ FD G T+TIG +RT VFFFKRKQ RGNL FFGG++LV L WA IG+ QV GFLNLFGPFIPIAV+A+R TPV+G++L LP +S +VDKLAG RRAPV Sbjct: 2 VSDNRQIGMGLLALGGIFLLLGVMMLFDPGXXXXXXXXXXXXXTMTIGTRRTFVFFFKRKQARGNLCFFGGVVLVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRGTPVVGNLLNLPVVSSLVDKLAGSSSRGRRAPV 141
BLAST of mRNA_P-wetherbeei_contig10636.1.1 vs. uniprot
Match: A0A8K1CUH0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUH0_PYTOL) HSP 1 Score: 157 bits (398), Expect = 2.950e-43 Identity = 81/133 (60.90%), Postives = 108/133 (81.20%), Query Frame = 1 Query: 7 LTRMDDNKKIGTGLLILGFIFIFLGVVLFFDAGLLAIGDILFLTGITLTIGLQRTLVFFFKRKQLRGNLFFFGGIILVLLRWAFIGLVLQVFGFLNLFGPFIPIAVEAMRSTPVLGSILALPGISGMVDKLAG 405 L +DDN+KIGT LL +GF+F+FLGV+LFFDA LLA+GD+LFL+G+ LTIGL RT+ FF ++++ RG + F GGI+LV+LR+ IG+ +Q FGFLNLFG F P+AV +R TPV+G++L LPGIS VD+LAG Sbjct: 354 LAMLDDNRKIGTLLLGIGFVFLFLGVLLFFDAALLALGDVLFLSGLALTIGLSRTIRFFTRKERWRGIVCFLGGILLVMLRFPIIGMFMQAFGFLNLFGSFFPVAVAFLRQTPVIGTVLNLPGISDAVDRLAG 486
BLAST of mRNA_P-wetherbeei_contig10636.1.1 vs. uniprot
Match: A0A507CCU7_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CCU7_9FUNG) HSP 1 Score: 146 bits (369), Expect = 1.250e-42 Identity = 72/141 (51.06%), Postives = 105/141 (74.47%), Query Frame = 1 Query: 1 IWLTRMDDNKKIGTGLLILGFIFIFLGVVLFFDAGLLAIGDILFLTGITLTIGLQRTLVFFFKRKQLRGNLFFFGGIILVLLRWAFIGLVLQVFGFLNLFGPFIPIAVEAMRSTPVLGSILALPGISGMVDKLAGRRRAPV 423 +WLT D +KIG GL G F+FLG++LFFDAGLLAIG+ILFL G+TL IG+ +T FF ++ +LRG + F GGI+LV ++W IG+V+++FGF+NLFG F P+ + +R P +G+ILA+P +S ++D++AG + PV Sbjct: 1 MWLT---DTQKIGVGLTAFGLFFMFLGILLFFDAGLLAIGNILFLGGLTLVIGMAKTATFFMRKNKLRGTVCFLGGILLVFIKWPMIGMVVELFGFVNLFGDFFPVVIGFLRRLPFIGTILAIPAVSNVLDRIAGPTKLPV 138 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10636.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10636.1.1 >prot_P-wetherbeei_contig10636.1.1 ID=prot_P-wetherbeei_contig10636.1.1|Name=mRNA_P-wetherbeei_contig10636.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp MDDNKKIGTGLLILGFIFIFLGVVLFFDAGLLAIGDILFLTGITLTIGLQback to top mRNA from alignment at P-wetherbeei_contig10636:275..878- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10636.1.1 ID=mRNA_P-wetherbeei_contig10636.1.1|Name=mRNA_P-wetherbeei_contig10636.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=604bp|location=Sequence derived from alignment at P-wetherbeei_contig10636:275..878- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10636:275..878- >mRNA_P-wetherbeei_contig10636.1.1 ID=mRNA_P-wetherbeei_contig10636.1.1|Name=mRNA_P-wetherbeei_contig10636.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig10636:275..878- (Phaeothamnion wetherbeei SAG_119_79)back to top |