mRNA_P-wetherbeei_contig10628.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10628.2.1 vs. uniprot
Match: D7FVX7_ECTSI (Proliferating cell nuclear antigen n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVX7_ECTSI) HSP 1 Score: 155 bits (393), Expect = 3.200e-45 Identity = 73/105 (69.52%), Postives = 93/105 (88.57%), Query Frame = 1 Query: 4 MFEARLAEGVLLKKLIESIRELVGDANLDCSDAGISMQAMDSSHVSLCVLLLRADAFENYRCDRNLSLGLSMGNISKIMKCAENEDVITLSAQDDAETLTLMFES 318 M+EARL + LLKK+IE++RELV DANLDCS++GISMQAMDSSHVSLC L++R+D F++YRCDR+LSLGLS G+ISKI+KCA N+D +TL A+D A+ LT+MFES Sbjct: 1 MYEARLLQASLLKKIIEAVRELVTDANLDCSESGISMQAMDSSHVSLCALMIRSDGFQHYRCDRSLSLGLSTGSISKILKCAGNDDTVTLKAEDTADALTIMFES 105
BLAST of mRNA_P-wetherbeei_contig10628.2.1 vs. uniprot
Match: A0A835ZEE1_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEE1_9STRA) HSP 1 Score: 155 bits (392), Expect = 4.530e-45 Identity = 75/105 (71.43%), Postives = 91/105 (86.67%), Query Frame = 1 Query: 4 MFEARLAEGVLLKKLIESIRELVGDANLDCSDAGISMQAMDSSHVSLCVLLLRADAFENYRCDRNLSLGLSMGNISKIMKCAENEDVITLSAQDDAETLTLMFES 318 MFEA+L E LLKK++E+IRELV DANLDCS+AGI+MQAMDSSHVSLC L LR+D F++YRCDRNLSLGL++ N+SKI+KCA N DV TL +DDA+TLT+ FES Sbjct: 1 MFEAKLNEASLLKKIVEAIRELVTDANLDCSEAGITMQAMDSSHVSLCALNLRSDGFDHYRCDRNLSLGLNLANLSKILKCAGNNDVCTLRTEDDADTLTVTFES 105
BLAST of mRNA_P-wetherbeei_contig10628.2.1 vs. uniprot
Match: A0A812RGX4_SYMMI (Proliferating cell nuclear antigen n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RGX4_SYMMI) HSP 1 Score: 153 bits (387), Expect = 2.570e-44 Identity = 73/106 (68.87%), Postives = 93/106 (87.74%), Query Frame = 1 Query: 1 RMFEARLAEGVLLKKLIESIRELVGDANLDCSDAGISMQAMDSSHVSLCVLLLRADAFENYRCDRNLSLGLSMGNISKIMKCAENEDVITLSAQDDAETLTLMFES 318 +MFEARL +G +LKK+IE+IRELV DANLDCS GISMQAMDSSHVSLC LL+RA+AF++YRCD ++SLGL+ N+SKI+KCA N+DV+TL + D ++TLTL+FES Sbjct: 1 KMFEARLVQGAILKKIIEAIRELVIDANLDCSSTGISMQAMDSSHVSLCALLMRAEAFDHYRCDVDMSLGLNTPNLSKILKCAGNDDVVTLKSTDQSDTLTLVFES 106
BLAST of mRNA_P-wetherbeei_contig10628.2.1 vs. uniprot
Match: A0A835YRT1_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRT1_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.460e-43 Identity = 72/105 (68.57%), Postives = 91/105 (86.67%), Query Frame = 1 Query: 4 MFEARLAEGVLLKKLIESIRELVGDANLDCSDAGISMQAMDSSHVSLCVLLLRADAFENYRCDRNLSLGLSMGNISKIMKCAENEDVITLSAQDDAETLTLMFES 318 MFEA L+E LLKK+++SIRELV DANLDCSDAGI+MQAMDSSHVSLC L LR D F+++RCDRNLSLG+++ N+SKI+KCA N D++TL ++DDA+TL + FES Sbjct: 1 MFEATLSEASLLKKIVDSIRELVTDANLDCSDAGINMQAMDSSHVSLCALSLRNDGFDHFRCDRNLSLGVNLANLSKILKCAGNTDLVTLKSEDDADTLGVKFES 105
BLAST of mRNA_P-wetherbeei_contig10628.2.1 vs. uniprot
Match: A0A7S2DHU7_9STRA (Proliferating cell nuclear antigen n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHU7_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.130e-42 Identity = 66/109 (60.55%), Postives = 93/109 (85.32%), Query Frame = 1 Query: 1 RMFEARLAEGVLLKKLIESIRELVGDANLDCSDAGISMQAMDSSHVSLCVLLLRADAFENYRCDRNLSLGLSMGNISKIMKCAENEDVITLSAQDDAETLTLMFESEGA 327 RMFEARL +G LLKK++E++R+LV DAN+DC + G+S+QAMDSSHVSLC L+LR+D F++YRCDR +SLGL++GN+ KI+KC+ N+DV+TL ++D + LT+MFE+ A Sbjct: 10 RMFEARLIQGNLLKKIVEAVRDLVTDANVDCKEQGLSLQAMDSSHVSLCALVLRSDGFDHYRCDRPISLGLNLGNLGKILKCSGNDDVVTLKSEDQGDLLTIMFENPAA 118
BLAST of mRNA_P-wetherbeei_contig10628.2.1 vs. uniprot
Match: A0A453CEH7_AEGTS (PCNA_N domain-containing protein n=2 Tax=Triticinae TaxID=1648030 RepID=A0A453CEH7_AEGTS) HSP 1 Score: 144 bits (364), Expect = 1.380e-42 Identity = 65/112 (58.04%), Postives = 91/112 (81.25%), Query Frame = 1 Query: 1 RMFEARLAEGVLLKKLIESIRELVGDANLDCSDAGISMQAMDSSHVSLCVLLLRADAFENYRCDRNLSLGLSMGNISKIMKCAENEDVITLSAQDDAETLTLMFESEGARPA 336 +M E RL +G LLKK++E+I+ELV DAN DCS G S+QAMDSSHV+L LLLR++ FE+YRCDRNLS+G+++GN++K+++CA N+D+IT+ A D ++T+T MFES PA Sbjct: 2 KMLELRLVQGSLLKKVLEAIKELVTDANFDCSGTGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNLSMGMNLGNMAKMLRCAGNDDIITIKADDGSDTVTFMFESPSKHPA 113
BLAST of mRNA_P-wetherbeei_contig10628.2.1 vs. uniprot
Match: L1IQM8_GUITC (Proliferating cell nuclear antigen n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IQM8_GUITC) HSP 1 Score: 147 bits (370), Expect = 8.660e-42 Identity = 72/105 (68.57%), Postives = 90/105 (85.71%), Query Frame = 1 Query: 4 MFEARLAEGVLLKKLIESIRELVGDANLDCSDAGISMQAMDSSHVSLCVLLLRADAFENYRCDRNLSLGLSMGNISKIMKCAENEDVITLSAQDDAETLTLMFES 318 MFEARLA+G LLKKLIE+IRELV DAN D S +G+S+QAMD+SHVSL LLLR D FE++RCDR+LSLGL++ +I+K++KCA N+D ITL A+D +TLTLMFES Sbjct: 1 MFEARLAQGSLLKKLIEAIRELVTDANFDVSTSGVSLQAMDTSHVSLVSLLLREDGFEHFRCDRSLSLGLNLASITKMLKCANNDDAITLKAEDQGDTLTLMFES 105
BLAST of mRNA_P-wetherbeei_contig10628.2.1 vs. uniprot
Match: A0A482RVM6_9ARCH (Proliferating cell nuclear antigen (Pcna) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVM6_9ARCH) HSP 1 Score: 142 bits (359), Expect = 1.300e-41 Identity = 63/105 (60.00%), Postives = 90/105 (85.71%), Query Frame = 1 Query: 4 MFEARLAEGVLLKKLIESIRELVGDANLDCSDAGISMQAMDSSHVSLCVLLLRADAFENYRCDRNLSLGLSMGNISKIMKCAENEDVITLSAQDDAETLTLMFES 318 MFEA++ +G LLKK+IE+IRELV DANLDC++ GI+MQAMDSSHVSLC +LL+++ F YRCD++ +LG++ N++K++KCA N+DV+TL ++D +TLTL+FES Sbjct: 11 MFEAKILQGALLKKIIEAIRELVTDANLDCNERGITMQAMDSSHVSLCAILLKSEGFNFYRCDKSFALGINTPNLAKVLKCAGNDDVVTLKCEEDTDTLTLVFES 115
BLAST of mRNA_P-wetherbeei_contig10628.2.1 vs. uniprot
Match: A0A087UIJ0_STEMI (Proliferating cell nuclear antigen (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087UIJ0_STEMI) HSP 1 Score: 142 bits (357), Expect = 1.380e-41 Identity = 63/105 (60.00%), Postives = 91/105 (86.67%), Query Frame = 1 Query: 4 MFEARLAEGVLLKKLIESIRELVGDANLDCSDAGISMQAMDSSHVSLCVLLLRADAFENYRCDRNLSLGLSMGNISKIMKCAENEDVITLSAQDDAETLTLMFES 318 MFEARL +G LLKK++E+I++L+ +A DC+ GIS+QAMD+SHVSL L LR+D F+ +RCDRNLS+G+++G+++KI+KCA N+D+IT+ AQDDA+T+TL+FES Sbjct: 1 MFEARLVQGALLKKVLEAIKDLINEATWDCAATGISLQAMDNSHVSLVSLNLRSDGFDKFRCDRNLSMGMNLGSMAKILKCASNDDIITIKAQDDADTVTLVFES 105
BLAST of mRNA_P-wetherbeei_contig10628.2.1 vs. uniprot
Match: B4FGZ9_MAIZE (PCNA_N domain-containing protein n=2 Tax=Zea mays TaxID=4577 RepID=B4FGZ9_MAIZE) HSP 1 Score: 142 bits (358), Expect = 1.740e-41 Identity = 66/110 (60.00%), Postives = 88/110 (80.00%), Query Frame = 1 Query: 4 MFEARLAEGVLLKKLIESIRELVGDANLDCSDAGISMQAMDSSHVSLCVLLLRADAFENYRCDRNLSLGLSMGNISKIMKCAENEDVITLSAQDDAETLTLMFESEGARP 333 M E RL +G LLKK++E+IRELV DAN DCS G S+QAMDSSHV+L LLLRA+ FE+YRCDRNLS+G+++ N++K+++CA NED+IT+ A D ++T+T MFES P Sbjct: 1 MLELRLVQGSLLKKVLEAIRELVTDANFDCSGTGFSLQAMDSSHVALVALLLRAEGFEHYRCDRNLSMGMNLNNMAKMLRCAGNEDIITIKADDGSDTVTFMFESPSEWP 110 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10628.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10628.2.1 >prot_P-wetherbeei_contig10628.2.1 ID=prot_P-wetherbeei_contig10628.2.1|Name=mRNA_P-wetherbeei_contig10628.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=111bp MFEARLAEGVLLKKLIESIRELVGDANLDCSDAGISMQAMDSSHVSLCVLback to top mRNA from alignment at P-wetherbeei_contig10628:1602..2279+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10628.2.1 ID=mRNA_P-wetherbeei_contig10628.2.1|Name=mRNA_P-wetherbeei_contig10628.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig10628:1602..2279+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10628:1602..2279+ >mRNA_P-wetherbeei_contig10628.2.1 ID=mRNA_P-wetherbeei_contig10628.2.1|Name=mRNA_P-wetherbeei_contig10628.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=333bp|location=Sequence derived from alignment at P-wetherbeei_contig10628:1602..2279+ (Phaeothamnion wetherbeei SAG_119_79)back to top |