mRNA_P-wetherbeei_contig10627.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10627.1.2 vs. uniprot
Match: A0A6H5KVX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX8_9PHAE) HSP 1 Score: 146 bits (368), Expect = 5.940e-34 Identity = 186/468 (39.74%), Postives = 236/468 (50.43%), Query Frame = 1 Query: 25 AALTTALLGDKVKLLAKRTPYGTAPKKAVIPEDASREALWHWEVVTAPGLLPAGAGEAAVRAARRARDRAGKQVRALRRVVDAIEKHPGDEARISKEEERVIRFRREEEAERQKKLQRAKAAADXXXXXXXXXXA--------------------AKKDKEKSSKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETEKMSQKLLSFFKKPASXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGPAAAAGTEPAPEAAGVNGSGAGXXXXXXXXXXXXGTXXXXXXXXXXXXXGSASGRIGSG-WGETECAAFEAQLREGLPTNELLASVAASARKRSASTASAGATARCCSDQQRGRQRRPKRIKIDVTVDGGGVGAFGGGAAYSEIKEVMVANRMKLLQFHSDLRPPYWGTWSRRSGIVSGRAPLKRD-EALLDYEVDSEAEWEEEEPTAGEELKSDDDADTEPED 1362 A LT + K+ L+A+R YG+ P+KAVIPED + EA+W WEV L AG V++AR R +G+ V+AL R+ + + K PGD A+ISKEEE+V+ F R EEA RQK + XXXXXXXXXX A++D + + R XXXXXXXXXXXX ++ K+S L +FF+ S P G AG XXXXXX G XXXXXXX GS R G +G E A FE +L++G ELL A +RS A A + + R K+IK++VTV GG G FG +YSE K+V V NRMKLLQFH D RPPYWGTWS+ S V+GR PL RD + L+Y+ DSE +WEEE GE+L SD++ EPED Sbjct: 469 AGLTADQVSGKISLIAQRKCYGSQPRKAVIPEDTAPEAIWRWEVELVDLLPTDKAG--VVKSARSDRTNSGRLVKALVRLTEVMAKFPGDAAKISKEEEKVMAFARREEALRQKATLKEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAERDAKDQERRRVKAEAXXXXXXXXXXXXA----------KQQPKIS--LFNFFRVTDSAPSQDAKSATQRPIRAGLVTLLPTGAI------------CPHGVGN----AGGXXXXXXPAGVGGVEVGXXXXXXXDLGGSVVVRRSEGGFGPEEVALFEKRLKDGGEPEELLVKTAREMGERSLKRK---AIAAALAGDDKVEVVRAKKIKVNVTV-AGGRGGFGE-PSYSETKQVEVRNRMKLLQFHQDHRPPYWGTWSKNSSQVTGRRPLGRDTKGTLNYDYDSEEDWEEE--AQGEDLLSDEEV--EPED 897
BLAST of mRNA_P-wetherbeei_contig10627.1.2 vs. uniprot
Match: A0A835Z793_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z793_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.140e-31 Identity = 169/437 (38.67%), Postives = 211/437 (48.28%), Query Frame = 1 Query: 10 AEAAQAALTTALLGDKVKLLAKRTPYGTAPKKAVIPEDASREALWHWEVVTAPGLLPAGAGEAAVRAARRARDRAGKQVRALRRVVDAIEKHPGDEARISKEEERVIRFRREEEAERQKKLQRAKAAADXXXXXXXXXXAAKKDKEKSSKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETEKMSQKLLSFFKKPASXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGPAAAAGTEPAPEAAGVNGSGAGXXXXXXXXXXXXGTXXXXXXXXXXXXXGSASGRIGSGWGETECAAFEAQLREGLPTNELLASVAASARKRSASTASAGATARCCSDQQRGRQRRPKRIKIDVTVDGGGVGAFGGGAAYSEI-------KEVMVANRMKLLQFHSDLRPPYWGTWSRRSGIVSGRAPLKRDEALLDYEVDSEAEWEE 1299 A AA AA + +++ LA+R YG P+ V+ ED S EA+W WEVV A LL GEAA +AAR AR AG+ VRALRR++D + K PGD A+IS EEE+V +F R EAERQK L ++ ++ +E+ XXXXXXXXXXXXXXXXXXXXXXXX + +L+FFKK + PAPEAA XXXXXXXXX W AAFEAQLR GL ++LLA R R+ + A GA A + KR +I+V G + V++ RMKLLQF +D+RPPYWGT+S+RS V+GR PL RDE L DY+ DSEA W E Sbjct: 430 AAAAAAAGDAGAVAARIRALAERRAYGPTPRGTVVLEDESDEAVWRWEVVAAAELLDG--GEAAAKAARAARKGAGQHVRALRRLLDVMAKSPGDAAKISVEEEKVAKFTRAAEAERQKNL------------------VKERTRQAKEEEKRVKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAANMSVLNFFKKAPA--------------------------------------PAPEAAAA----------------------VSXXXXXXXXXXXXXXXXXXAWTPARQAAFEAQLRRGLTQDQLLAED----RARNVTGAKRGAGAFHAPPR--------KRARIEVPAAGXXXXXXXXXXXXXXXXXXXXXSRVVVLRPRMKLLQFAADVRPPYWGTFSKRSAAVTGRRPLGRDERL-DYDYDSEASWSE 773
BLAST of mRNA_P-wetherbeei_contig10627.1.2 vs. uniprot
Match: D7G3C4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C4_ECTSI) HSP 1 Score: 133 bits (334), Expect = 1.470e-29 Identity = 190/479 (39.67%), Postives = 239/479 (49.90%), Query Frame = 1 Query: 25 AALTTALLGDKVKLLAKRTPYGTAPKKAVIPEDASREALWHWEVVTAPGLLPAGAGEAAVRAARRARDRAGKQVRALRRVVDAIEKHPGDEARISKEEERVIRFRREEEAERQKKLQRAKAAADXXXXXXXXXXA--------------------AKKDKEKSSKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETEKMSQKLLSFFKKPASXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGPAAAAGTEPAPEAAGVNGSGAGXXXXXXXXXXXXGTXXXXXXXXXXXXXGSASGRIG------------SGWGETECAAFEAQLREGLPTNELLASVAASARKRSASTASAGATARCCSDQQRGRQRRPKRIKIDVTVDGGGVGAFGGGAAYSEIKEVMVANRMKLLQFHSDLRPPYWGTWSRRSGIVSGRAPLKRD-EALLDYEVDSEAEWEEEEPTAGEELKSDDDADTEPED 1362 A LT + K+ L+A+R YG+ P+KAVIPED + EA+W WEV L AG V++AR R +G+ V+AL R+ + + K PGD A+ISKEEE+V+ F R EEA RQK + XXXXXXXXXX A++D + + R XXXXXXXXXXX ++ K+S L +FF+ + AG A AA X XXXXXXXXXX XXXXXXXXXXX G G+G E FE +L++G ELL A +RS A A + R K+IK+ VTV GG G FG +YSE K+V V NRMKLLQFH D RPPYWGTWS+ S V+GR PL RD + L+Y+ DSE +WEEE GE+L SD++ EPED Sbjct: 437 AGLTADQVSGKISLIAQRKCYGSQPRKAVIPEDTAPEAIWRWEVQLMDLLPTEKAG--VVKSARSDRTNSGRLVKALVRLTEVMAKFPGDAAKISKEEEKVMAFARREEALRQKATLKEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERDAKDQERRRVKAEAAXXXXXXXXXXXA----------KQQPKIS--LFNFFRVTDAAPSQDAKENVEPSAMGVLHAGVNGSRDAAGKALAAAGXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXEVGXXXXXXXXXXXXXXXXXSEGGFGPEEVVLFEKRLKDGGEPEELLVKTAREMGERSLKRK---AIAAALAGDDEVEVVRAKKIKVTVTV-AGGRGGFGE-PSYSETKQVEVRNRMKLLQFHQDHRPPYWGTWSKSSSQVTGRRPLGRDTKGTLNYDYDSEEDWEEE--AQGEDLLSDEEV--EPED 892
BLAST of mRNA_P-wetherbeei_contig10627.1.2 vs. uniprot
Match: A0A7S1UT81_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UT81_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 6.800e-16 Identity = 40/71 (56.34%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 1114 YSEIKEVMVANRMKLLQFHSDLRPPYWGTWSRRSGIVSGRAPLKRDEALLDYEVDSEAEWEEEEPTAGEEL 1326 Y+++K +M N+ KLL+FH D+RPPY GTW +RS +V+G AP RDE LDY++DSEAEWEE + GE+L Sbjct: 178 YADLKTIMFPNKYKLLRFHEDVRPPYRGTWRKRSKVVTGSAPFARDETHLDYDLDSEAEWEEGDDEIGEDL 248
BLAST of mRNA_P-wetherbeei_contig10627.1.2 vs. uniprot
Match: B7G639_PHATC (Chromatin assembly factor subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G639_PHATC) HSP 1 Score: 90.5 bits (223), Expect = 1.650e-15 Identity = 42/100 (42.00%), Postives = 65/100 (65.00%), Query Frame = 1 Query: 1033 RQRRPKRIKIDVTVDGGGVGAFGGGAAYSEIKEVMVANRMKLLQFHSDLRPPYWGTWSRRSGIVSGRAPLKRDEALLDYEVDSEAEWEEEEPTAGEELKS 1332 R RR K + ++V V G ++E + + V N+ K L+FH D+RPPY+GTWS+R IV+G+ P +++ LL+Y+ DSEAEWEE + GE+L++ Sbjct: 919 RHRRTKMVNMEVFVTVVPENGAFGAQPFAEQQTITVPNKYKFLRFHEDVRPPYFGTWSKRGSIVTGKTPFRKETTLLEYDYDSEAEWEEGDDEIGEDLEN 1018
BLAST of mRNA_P-wetherbeei_contig10627.1.2 vs. uniprot
Match: A0A1Z5JAD9_FISSO (Naphthoate synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAD9_FISSO) HSP 1 Score: 89.7 bits (221), Expect = 2.950e-15 Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 1111 AYSEIKEVMVANRMKLLQFHSDLRPPYWGTWSRRSGIVSGRAPLKRDEALLDYEVDSEAEWEE 1299 AYSE ++V V N+ K FH D+RPPY+GTWS+ S IV+GR+P KRD A LDYE DSE EWEE Sbjct: 1047 AYSERRDVEVLNKYKFFSFHEDVRPPYYGTWSKPSTIVTGRSPFKRDTAFLDYEYDSEGEWEE 1109
BLAST of mRNA_P-wetherbeei_contig10627.1.2 vs. uniprot
Match: A0A8C5DX86_9TELE (Chromatin assembly factor 1 subunit A n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5DX86_9TELE) HSP 1 Score: 87.8 bits (216), Expect = 1.020e-14 Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 1 Query: 1150 MKLLQFHSDLRPPYWGTWSRRSGIVSGRAPLKRDEALLDYEVDSEAEWEEEEP 1308 MKLLQFH + RP YWGTWS++S ++S R PLK D+ALLDYEVDS+ EWEEEEP Sbjct: 486 MKLLQFHENYRPAYWGTWSKKSSLISPRCPLKHDKALLDYEVDSDEEWEEEEP 538
BLAST of mRNA_P-wetherbeei_contig10627.1.2 vs. uniprot
Match: A0A1Z5JGV0_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGV0_FISSO) HSP 1 Score: 87.4 bits (215), Expect = 1.520e-14 Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1 Query: 1114 YSEIKEVMVANRMKLLQFHSDLRPPYWGTWSRRSGIVSGRAPLKRDEALLDYEVDSEAEWEE 1299 Y+E ++V V N+ K L FH D+RPPY+GTWS+ S IV+GR+P K+D A LDYE DSE EWEE Sbjct: 721 YAERRDVEVLNKYKFLSFHEDIRPPYYGTWSKPSKIVTGRSPFKQDTAFLDYEYDSEGEWEE 782
BLAST of mRNA_P-wetherbeei_contig10627.1.2 vs. uniprot
Match: A0A3B4CN46_PYGNA (Chromatin assembly factor 1 subunit A n=2 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4CN46_PYGNA) HSP 1 Score: 87.0 bits (214), Expect = 1.790e-14 Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 1 Query: 1105 GAAYSEIKEVMVANRMKLLQFHSDLRPPYWGTWSRRSGIVSGRAPLKRDEALLDYEVDSEAEWEEEEP 1308 G+ ++ + RMKLLQFH + RP YWGTWS++S VS R P K+D+ LLDYEVDS+ EWEEEEP Sbjct: 472 GSKPEDVPDRKCCGRMKLLQFHENYRPAYWGTWSKKSNYVSPRCPFKQDKKLLDYEVDSDEEWEEEEP 539
BLAST of mRNA_P-wetherbeei_contig10627.1.2 vs. uniprot
Match: A0A6J2W9S6_CHACN (chromatin assembly factor 1 subunit A n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2W9S6_CHACN) HSP 1 Score: 86.7 bits (213), Expect = 2.390e-14 Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 1 Query: 1147 RMKLLQFHSDLRPPYWGTWSRRSGIVSGRAPLKRDEALLDYEVDSEAEWEEEEP 1308 RMKLLQFH + RP YWGTWSR+S +S R PL++D+ LLDYEVDS+ EWEEEEP Sbjct: 482 RMKLLQFHENYRPAYWGTWSRKSRCISPRCPLRQDKVLLDYEVDSDEEWEEEEP 535 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10627.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10627.1.2 >prot_P-wetherbeei_contig10627.1.2 ID=prot_P-wetherbeei_contig10627.1.2|Name=mRNA_P-wetherbeei_contig10627.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=454bp MVAAEAAQAALTTALLGDKVKLLAKRTPYGTAPKKAVIPEDASREALWHWback to top mRNA from alignment at P-wetherbeei_contig10627:355..2145+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10627.1.2 ID=mRNA_P-wetherbeei_contig10627.1.2|Name=mRNA_P-wetherbeei_contig10627.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1791bp|location=Sequence derived from alignment at P-wetherbeei_contig10627:355..2145+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10627:355..2145+ >mRNA_P-wetherbeei_contig10627.1.2 ID=mRNA_P-wetherbeei_contig10627.1.2|Name=mRNA_P-wetherbeei_contig10627.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1362bp|location=Sequence derived from alignment at P-wetherbeei_contig10627:355..2145+ (Phaeothamnion wetherbeei SAG_119_79)back to top |