mRNA_P-wetherbeei_contig10608.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10608.1.2
Unique NamemRNA_P-wetherbeei_contig10608.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: A0A6H5J9Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Y7_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 1.010e-41
Identity = 103/295 (34.92%), Postives = 145/295 (49.15%), Query Frame = 3
Query:  387 CDQRWA-DHHNISVTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITGFLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQNMSDDNSCATEGKINICQSFMPYLDAGQGYNAVVVNSGAHYI--DDDAYVVSMTVAADAISARMREAHADSSLMLFRNTVPGSPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIF-AARGFVLLDVYTPTVRRFDSHIGGADCLHYCIPGPIDHWIRLLQLAL 1259
            C +RWA +H         P W W P +CRL    +  FC  ++ R   G L  GDSL    + TL   LR+ R+     K+    + Y AC G L L + RND L  +    D     E  I+I Q  M Y      Y+ ++VN+GAH      +AY   +  AA++++A MR  H DS++++ RNTVPG  +  +   + P+ L  A  +V            + G  ++ W  ++  N L E  F A  G  LLD Y+PT+ R DSH    D LHYC+PGPIDHW+ LL   L
Sbjct:   29 CGKRWAAEHEGEEPVPPMPYWKWEPSACRLEEVDEAKFCRVMKGRK--GLLFAGDSLTGEMIDTLRAVLRATRVKHVKLKM----DTYTACDGELTLSWYRNDYLDTRLDGFDTPRCEEPDISISQC-MTYDATLSQYDTLLVNAGAHRQLGGVEAYGSMIKTAAESLTASMRRLHGDSAILVVRNTVPGHGESFDRMFTGPVNLDTALDLV------------EKGPPEFEWTTIRDKNTLLEEAFDATHGRTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNIL 304          
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: A0A6H5KFW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW9_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 1.810e-41
Identity = 111/327 (33.94%), Postives = 155/327 (47.40%), Query Frame = 3
Query:  342 DEGAHTIG----ASNFPFI--CDQRWADHHNIS-VTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITGFLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQNMSDDNSCATEGKIN-------ICQSFMPYLDAGQGYNAVVVNSGAHYIDDDAYVVSMTVAADAISARMREAHA-DSSLMLFRNTVPGSPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIFAA-RGFVLLDVYTPTVRRFDSHIGGADCLHYCIPGPIDHWIRLLQLALTTS*N 1274
            D  A+ +G     S F F+  C   W     +   TG RP W W P  C L A  +   C  +  R   G L+VGDSL RL  TTLA  LR++ L     K     + + ACGG ++L+F+RND+L  +      S   E  +         C+ F       + ++ +VVNSGAH      +   M  +A A+++ M+  H  D ++++ RNTVPG   C       P+    A  +VA A +             Y W   +  N   +  F+  RG+ LLD Y+PT+ R DSHIG +DCLHYCIPGP DHW  LL   L  + N
Sbjct:   99 DSPANMVGWEFPTSEFGFLAKCQNIWNKRKRVEGETGPRPYWAWEPTKCSLDAVSEEKLCRVLEGRK--GLLLVGDSLTRLSTTTLASILRAKSLTADLYK-----DDWEACGGKVKLRFMRNDVLDTRTKPRYRSVRCEESVGGALVNNTRCRIFATDATLRE-FDTLVVNSGAHPRPAAEFGREMEASAKALTSSMKRLHGEDKAILVVRNTVPGHWGCTERMFDAPVNKTIALKLVAEAPDS------------YEWDSFESRNVQLQKAFSPDRGWTLLDAYSPTLLRPDSHIGNSDCLHYCIPGPADHWALLLYNILLVAKN 405          
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: D7FL53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL53_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 3.290e-40
Identity = 103/303 (33.99%), Postives = 144/303 (47.52%), Query Frame = 3
Query:  384 ICDQRWADHHNISVTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITGFLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQNMSD---DNSCATEG--KINICQSFMPYLDAGQGYNAVVVNSGAHYIDDDAYVVSMTVAADAISARMREAHADSSLMLFRNTVPGSPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIF---AARGFVLLDVYTPTVRRFDSHIGG---ADCLHYCIPGPIDHWIRLLQLAL 1259
            IC Q+WA+ H        P + W    C L    +  FC A++ R   G L+VGDS+  L + TL   LR+   P  S         + AC G +++ F RND L          D  C +    + + C+ F       + Y+ +++NSGAH    D Y  SM  A+  ++A M+  H D +L++ RNT PG   C       P+++  A  +VAS            G  +Y W     +NA+ E  F   A  G+  LD YTPT+ R D H+GG    DCLHYCIPGPI HW+RLL   L
Sbjct:   86 ICYQKWAELHGSEEP--MPYYTWDAVECSLDNVDEEKFCHALQGRK--GILLVGDSITTLMVRTLVSVLRATSEPVHSKYHLNHAHKWGACNGEVKIAFYRNDFLDTTTRRSAFWDGFCDSRNPKRNSQCEVFADDYTLEE-YDTLIINSGAHPRSLDEYRDSMGTASKELTASMKRLHGDDALLIVRNTPPGHGGCSERTFDGPVDVDTALDLVAS------------GPHQYQWGRFPEYNAMLEEAFLINATDGWKELDAYTPTLLRPDFHLGGDDNPDCLHYCIPGPIYHWVRLLYNML 371          
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: A0A6H5JZZ9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ9_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 6.570e-40
Identity = 106/304 (34.87%), Postives = 146/304 (48.03%), Query Frame = 3
Query:  384 ICDQRWADHHNISVTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITGFLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQNMSD---DNSCATEG-KINI-CQSFMPYLDAGQGYNAVVVNSGAHYIDDDAYVVSMTVAADAISARMREAHADSSLMLFRNTVPG-SPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIF---AARGFVLLDVYTPTVRRFDSHIGG---ADCLHYCIPGPIDHWIRLLQLAL 1259
            IC Q+WA+HH        P + W    C L    +  FC A+  R   G L+VGDS+  L + TL   LR+      S         + AC G +++ F RND L          D  C +   K N  C+ F    D  + Y+ +++NSGAH    D Y  +M  A+  ++A M+  H D +L++ RNT PG    C       P+++  A  +VAS            G  +Y W    ++NA+ E  F   A  G+  LD YTPT+ R D H+GG    DCLHYCIPGPIDHW+RLL   L
Sbjct:   87 ICYQKWAEHHGSEEP--MPYYTWDAAECSLEDVNEEKFCRAMEGRK--GILLVGDSITDLMVRTLVSVLRATPEQVHSKYHLNHALKWGACNGEVKIAFYRNDFLDTTTRRSAFWDGFCDSRNPKRNAQCEVFADD-DTLKEYDTLIINSGAHPRSLDEYREAMETASKKMTASMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTALDLVAS------------GPHQYQWGRFPKYNAILEEAFLSNATDGWKELDAYTPTLLRPDFHLGGDENPDCLHYCIPGPIDHWVRLLYNML 373          
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: D8LHR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR2_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 2.870e-39
Identity = 101/296 (34.12%), Postives = 145/296 (48.99%), Query Frame = 3
Query:  387 CDQRW-ADHHNISVTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITGFLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQNMSDDNSCATEGKINICQSFMPYLDAGQG-YNAVVVNSGAHYI--DDDAYVVSMTVAADAISARMREAHADSSLMLFRNTVPGSPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIF-AARGFVLLDVYTPTVRRFDSHIGGADCLHYCIPGPIDHWIRLLQLAL 1259
            C +RW A+H         P W W P +CRL    +  FC  ++ R   G L  GDSL    + TL   LR+ R+     K+    + Y AC G L L + RND L  +    D     E  I+I Q  +   DA    Y+ ++VN+GAH      +AY   +  A ++++A MR  H D+++++ RNTVPG  +  +   + P+ L  A  +V            + G  ++ W  +   N L E  F A  G+ LLD Y+PT+ R DSH    D LHYC+PGPIDHW+ LL   L
Sbjct:  150 CGKRWSAEHEGEEPVPPMPYWKWEPSACRLEEVDEAKFCRVMKGRK--GLLFAGDSLTGEMIDTLRAVLRATRVKHVHLKM----DTYTACDGELTLSWYRNDFLDTRLDGFDTPRCEEPDISISQCMVFADDATLSQYDTLLVNAGAHRQLGGVEAYGSMIKTAGESLTASMRRLHGDNAILVVRNTVPGHGESFDRMFTGPVNLDTALDLV------------EKGPPEFEWTTILDKNTLLEEAFEATHGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNIL 427          
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: A0A6H5J7J3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J3_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 1.530e-38
Identity = 103/300 (34.33%), Postives = 144/300 (48.00%), Query Frame = 3
Query:  387 CDQRW-ADHHNISVTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITGFLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQNMSDDN-SCAT-EGKINICQSFMP-YLDAG-QGYNAVVVNSGAHYIDD--DAYVVSMTVAADAISARMREAHADSSLMLFRNTVPGSPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIFAAR--GFVLLDVYTPTVRRFDSHIGGADCLHYCIPGPIDHWIRLLQLAL 1259
            C +RW A+H  +      P W W P +CRL    +  FC  +  R   G L  GDSL    + TLA  LR+  +      +    + Y AC G L L + RND L  +    D   C   +  ++ C  F   Y DA    ++ +VVNSGAH      +AY   M  A+++++  MR  H D+++++ RNTVPG  +  +     P++L  A  +VA             G  +Y W      N L E  F A   G+ LLD Y+PT+ R DSH    D LHYC+PGPIDHW+ LL   L
Sbjct:  165 CSERWSAEHDGVGPVPPMPYWKWEPSACRLEEVDEAKFCRVMEGRK--GLLFAGDSLTGEMIDTLAAVLRATLVKH----VPLTMDTYTACDGELTLSWYRNDFLDTRTDGFDTVHCEDPDASMSHCMVFAGMYHDATLTQFDTLVVNSGAHLRSGGLEAYGSMMKNASESLTTSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAK------------GPPRYKWTTFGDRNKLLEEAFEATNGGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNIL 446          
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: D7FL51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL51_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 1.520e-35
Identity = 102/304 (33.55%), Postives = 141/304 (46.38%), Query Frame = 3
Query:  384 ICDQRWADHHNISVTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITGFLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQNMSD---DNSCATEG-KINI-CQSFMPYLDAGQGYNAVVVNSGAHYIDDDAYVVSMTVAADAISARMREAHADSSLMLFRNTVPG-SPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIF---AARGFVLLDVYTPTVRRFDSHIGG---ADCLHYCIPGPIDHWIRLLQLAL 1259
            IC Q+WA+HH        P + W    C L    +  FC A+  R   G L+VGDS+  L + +      + +              + AC G +++ F RND L          D  C +   K N  C+ F    D  + Y+ +++NSGAH    D Y  SM  A+  ++  M+  H D +L++ RNT PG    C       P+++  A  +VAS            G  +Y W     +NA+ E  F   A  G+  LD YTPT+ R D H+GG    DCLHYCIPGPIDHWIRLL   L
Sbjct:   88 ICYQKWAEHHGSEEP--MPYYTWDAAECSLDNVDEEKFCRAMEGRK--GILLVGDSITDLMVHSKYHLNHARK--------------WGACNGEVKIAFYRNDFLDTTTRRSSFWDGFCDSRNPKRNAQCEVFADD-DTLKEYDTLIINSGAHPRSLDEYRDSMETASKELTVSMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTALDLVAS------------GPHQYQWGRFPEYNAILEEAFLINATDGWKELDAYTPTLLRPDFHLGGDDNPDCLHYCIPGPIDHWIRLLYNML 360          
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: A0A6H5JU41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU41_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 2.850e-28
Identity = 107/354 (30.23%), Postives = 161/354 (45.48%), Query Frame = 3
Query:  387 CDQRWADHHN-ISVTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITGFLVVGD--------------------SLNRLFMT-----TLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQ------------NMSDDNSCATEGKINI-----------CQSFMPYL--DAGQ-GYNAVVVNSGAHYIDD--DAYVVSMTVAADAISARMREAHADSSLMLFRNTVPGSPDC-DNFEG------SPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIF-AARG-FVLLDVYTPTVRRFDSHIGGADCLHYCIPGPIDHWIRLLQLAL 1259
            C +RW++ H         P W W P +CRL    ++ FC  +  R   G L VG+                    S  R  +T     TLA+ LR+ R+    + +   G+ Y AC GAL L + RND L  +            ++S        G  +I           CQ  + ++  DA    ++ +VVN+GAH      +AY   M  A++ +++ MR  H D+++++ RNTVPG  +  + +E       S P+++  A  +V         E+ +PG   Y W+     N L E  F AA G + LLD Y+PT+ R DSH    D LHYC+PGPID+W+ LL   L
Sbjct:   76 CGERWSEEHQGQGHAPPMPYWKWEPSACRLEEVDQISFCGVMEGRK--GLLFVGEGRVVRRPKKDGLAVGRKNPASSTRQLLTGEMIDTLAVILRATRV----EYVPMTGKTYSACDGALTLSWYRNDYLDTRTDGFDTVHCEDPDLSASRCVVFAGMASIKMEMVRAATMQCQPALMFIADDATLIQFDTLVVNAGAHRRSGGLEAYGSMMKNASEILTSSMRRLHGDNAILVVRNTVPGHGESYERWETAEEKMFSGPVDVDTALDLV---------EKGRPG---YLWSTFGDKNKLLEEAFVAAHGSWTLLDAYSPTILRADSHPSANDGLHYCVPGPIDNWVVLLYNIL 411          
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: A0A7S0JJ27_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JJ27_9EUKA)

HSP 1 Score: 125 bits (313), Expect = 5.470e-28
Identity = 90/299 (30.10%), Postives = 129/299 (43.14%), Query Frame = 3
Query:  444 WHW-CPESCRLPAFRKLDFCDAVRSRDITGFLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQNMSDDNSCATEGKINICQSFMPYLDAG------------------------------QGYNAVVVNSGAHYIDDDAYVVSMTVAADAISARMREAHADSSLMLFRNTVPGSPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIFAARGFVLLDVYTPTVRRFDSHIGGADCLHYCIPGPIDHWIRLL 1247
            W W CP    LP       C  +R       L+VGDS++ +F  TLA     +RL D   +       +  CGG  RL +VRND+L V   +      T G+   C    P L  G                              +G +  V+NSGAH + DD Y   M  AA    A  R    + +++++RNT  G+P C   + + PL   +A  +  +A             + ++W    R NA+A  +F A+GF + D YT T  R D H    DCLHYC+PGP+ HW+ L+
Sbjct:   44 WQWRCPP---LPVPDPRALCLRLRGN----ILIVGDSVSHVFAQTLAALQGGQRLQDTPSRAE-----WSVCGGRRRLTYVRNDVLDVA--ASYGGALTSGRGFNCYMRAPPLSFGAGGPTPLAVRAALQNKGGNPALCNPWSSDLRGADLAVLNSGAHGLPDDVYAAFMRAAA----AHARGHAPNGTVLVWRNTPAGTPGCAATKTAAPLPTLQAAKVHIAALG-----------WAFDWDQFARRNAIAARVFLAQGFAVADAYTGTAMRLDGH--PHDCLHYCMPGPVLHWVLLV 311          
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: A0A6H5K9U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U7_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.910e-21
Identity = 57/141 (40.43%), Postives = 74/141 (52.48%), Query Frame = 3
Query:  858 MTVAADAISARMREAHADSSLMLFRNTVPG-SPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIF---AARGFVLLDVYTPTVRRFDSHIGG---ADCLHYCIPGPIDHWIRLLQLAL 1259
            M  A+  I+A M+  H D +L++ RNT PG    C       P+++  A  +VAS            G  +Y W     +NA+ E  F   A  G+  LD YTPT+ R D H+GG    DCLHYCIPGPIDHW+RLL   L
Sbjct:    1 METASKEITASMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTAIDLVAS------------GPHQYQWGRFPEYNAILEEAFLGNATDGWKELDAYTPTLLRPDFHLGGDENPDCLHYCIPGPIDHWVRLLYSML 129          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9Y7_9PHAE1.010e-4134.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFW9_9PHAE1.810e-4133.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL53_ECTSI3.290e-4033.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZZ9_9PHAE6.570e-4034.87Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D8LHR2_ECTSI2.870e-3934.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7J3_9PHAE1.530e-3834.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL51_ECTSI1.520e-3533.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JU41_9PHAE2.850e-2830.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0JJ27_9EUKA5.470e-2830.10Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A6H5K9U7_9PHAE1.910e-2140.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10608contigP-wetherbeei_contig10608:111..2311 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog36080.S2K9M0
PFAMsPC-Esterase
Model size1668
Max annot lvl4751|Fungi
Hectar predicted targeting categorysignal peptide
Exons3
Evalue1.61e-19
EggNOG OGs2DIAT@1|root,2S5Y9@2759|Eukaryota,3A7BT@33154|Opisthokonta,3P5G3@4751|Fungi,1GTTD@112252|Fungi incertae sedis
DescriptionMortierella verticillata NRRL 6337
Cds size1191
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185877.206243-UTR-P-wetherbeei_contig10608:110..1901683185877.206243-UTR-P-wetherbeei_contig10608:110..190Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig10608 111..190 +
1683185877.2462597-UTR-P-wetherbeei_contig10608:1914..23111683185877.2462597-UTR-P-wetherbeei_contig10608:1914..2311Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig10608 1915..2311 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185877.2174866-CDS-P-wetherbeei_contig10608:190..3681683185877.2174866-CDS-P-wetherbeei_contig10608:190..368Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10608 191..368 +
1683185877.227124-CDS-P-wetherbeei_contig10608:569..15201683185877.227124-CDS-P-wetherbeei_contig10608:569..1520Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10608 570..1520 +
1683185877.2368624-CDS-P-wetherbeei_contig10608:1852..19141683185877.2368624-CDS-P-wetherbeei_contig10608:1852..1914Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10608 1853..1914 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10608.1.2prot_P-wetherbeei_contig10608.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10608 191..1914 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10608.1.2

>prot_P-wetherbeei_contig10608.1.2 ID=prot_P-wetherbeei_contig10608.1.2|Name=mRNA_P-wetherbeei_contig10608.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=397bp
MLLLLESVCKWAARIGIGLGCVIVGTLCHHHLGLASAAVPVLSVAGLDDP
SMLCHPPGEAGFRIPCTLGTASSGDWIPTTITPVPPRDEGAHTIGASNFP
FICDQRWADHHNISVTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITG
FLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKF
VRNDILRVQNMSDDNSCATEGKINICQSFMPYLDAGQGYNAVVVNSGAHY
IDDDAYVVSMTVAADAISARMREAHADSSLMLFRNTVPGSPDCDNFEGSP
PLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIFAARG
FVLLDVYTPTVRRFDSHIGGADCLHYCIPGPIDHWIRLLQLALTTS*
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mRNA from alignment at P-wetherbeei_contig10608:111..2311+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10608.1.2 ID=mRNA_P-wetherbeei_contig10608.1.2|Name=mRNA_P-wetherbeei_contig10608.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2201bp|location=Sequence derived from alignment at P-wetherbeei_contig10608:111..2311+ (Phaeothamnion wetherbeei SAG_119_79)
TGTTTCTCCAAATTACGACCTCTTCATGCGGTATATTCTCTTGCCCTATC CCCACTCCTCTTCTCTACTCCTTCTCGCAGATGTTGTTGCTTCTGGAGAG CGTCTGCAAATGGGCGGCTCGCATCGGTATCGGTTTGGGATGTGTGATTG TAGGCACGTTGTGTCATCATCACTTGGGGCTCGCCTCCGCTGCTGTACCG GTCCTGAGCGTCGCCGGGCTGGATGACCCGAGCATGTTATGCCATCCGCC CGGCGAAGGTGCGTGAGAATGATTCGCTCAACTGGCACTCTGTGACCGGT CGTGCAAGAACTTGAGGATGCGGCTATGCACCAACGATTCCAACCTGATG ATGCGCCTGGCTAACACACAAGCAGGAAGAGCCGGATTGCTCCTTGTTCT TCTTTTCCTTCTTTTTCTTTAATTGAGAACCACTTCCTCCCTTGTTTGCG ACGGTGCAGCGGGCTTCCGAATCCCATGCACTCTGGGCACCGCTTCGAGC GGGGACTGGATTCCTACGACAATCACTCCTGTTCCGCCCCGCGACGAGGG AGCGCACACTATTGGAGCAAGCAACTTCCCTTTCATCTGCGACCAACGCT GGGCGGACCATCACAATATCTCCGTAACGGGCCTGCGGCCGCTCTGGCAC TGGTGCCCCGAGTCCTGCCGCCTGCCGGCGTTCCGCAAGTTGGACTTCTG CGATGCCGTCCGCAGCCGCGACATTACGGGGTTCCTCGTTGTGGGCGACA GCCTGAACCGGCTGTTCATGACAACGCTGGCTATGGCACTCAGATCCGAG CGCCTCCCTGACCAGAGCGACAAGATTAGCGCGGGGGGCGAGGCCTACCT GGCGTGCGGTGGGGCCCTCCGCCTCAAATTCGTACGGAACGACATTCTGC GCGTGCAAAACATGTCAGATGACAATTCCTGCGCAACGGAAGGAAAAATC AACATTTGCCAAAGCTTCATGCCCTACCTGGACGCTGGGCAGGGCTACAA CGCCGTCGTGGTCAACAGCGGCGCCCACTACATTGATGACGATGCATACG TCGTTTCCATGACCGTGGCAGCAGATGCAATTTCGGCGCGGATGAGGGAA GCGCACGCCGACTCTTCCCTCATGCTGTTTCGCAACACGGTCCCTGGATC TCCTGACTGCGACAACTTCGAGGGCTCGCCTCCGTTGGAACTGGGCGAAG CGGAAAGCATAGTCGCGTCAGCTAGTAATAAGGAGCCTGAGGAAGAGTAC AAACCGGGAGTATTTAAGTACAACTGGGCAGATTTAAAGCGGCACAACGC GCTGGCGGAACCCATTTTCGCCGCGAGGGGCTTTGTTTTGTTAGACGTCT ACACGCCAACAGTGCGGCGGTTCGACTCTCACATCGGTGGCGCTGATTGC CTTCACTACTGTGAGTACCCACCGCCTTGCGCCGCGTGCTGCCGTTCCTT CTTGCAGTGACGCATCGCTGCCTGCCTAGTGTATTTTTGCTCTTTGTTAT TATGGAGAGCACTGTTTCAGGGTCCGGCCCTCTCTTCCGCTAAAAGAACG CATTGCTGCAGCCATCGCCCAAATGGTGTGCTGCTGCATCGCAATGCATT TCGAGATCTTGTAGGAGTTTCAACTGCATTTGTGCTGTTGTGAGCACCCG TCAGCCTCGGTCTCTTCCCGCCTCAACTTTTCTCTCGTTTGGGGTTTTCC CGTTTTGCTCCGGTTGCCGATGCCCCACCCGGGATATTGCAGGCATTCCT GGGCCAATTGACCACTGGATTCGCCTGTTGCAGCTCGCCCTTACCACTAG TTAGAACTGGTTAAGACATCGCTGGAAGCTTTTCCACAGCGCCGGAACTG ACACAGAGTCGTCGGCTGGAGAGCGCCAGATGCCGCCAGCCGGAGAGCGC CAGGCAGGTGCCGCCAGCCGGAGAGCGCCAGTTGCCGCCAGCCGGGGGAG AGCGCCAGATACGCCAGCCGGAGAGTCCCCGCGCCGTCCGCGACAGGGCG GAACTGGCAACGCGCTCTCCCCAGAAAACGAGCTCCTCGGCAGGGCGAGG TGCAGTCCAGCCGCATGCATCGGCCGCTAGAACCGTCATTCGTGTGCTGC GGTCGTGCCGGCATGAGCGGCAGCAGGGTGGCCATGTGGGTGGCGGCAGG TAGCGTCGCATGATGACTGCGGCGGCGGCGACAGCGGCAGTTGCGGTAGT G
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10608:111..2311+

>mRNA_P-wetherbeei_contig10608.1.2 ID=mRNA_P-wetherbeei_contig10608.1.2|Name=mRNA_P-wetherbeei_contig10608.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1191bp|location=Sequence derived from alignment at P-wetherbeei_contig10608:111..2311+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTTGTTGCTTCTGGAGAGCGTCTGCAAATGGGCGGCTCGCATCGGTAT
CGGTTTGGGATGTGTGATTGTAGGCACGTTGTGTCATCATCACTTGGGGC
TCGCCTCCGCTGCTGTACCGGTCCTGAGCGTCGCCGGGCTGGATGACCCG
AGCATGTTATGCCATCCGCCCGGCGAAGCGGGCTTCCGAATCCCATGCAC
TCTGGGCACCGCTTCGAGCGGGGACTGGATTCCTACGACAATCACTCCTG
TTCCGCCCCGCGACGAGGGAGCGCACACTATTGGAGCAAGCAACTTCCCT
TTCATCTGCGACCAACGCTGGGCGGACCATCACAATATCTCCGTAACGGG
CCTGCGGCCGCTCTGGCACTGGTGCCCCGAGTCCTGCCGCCTGCCGGCGT
TCCGCAAGTTGGACTTCTGCGATGCCGTCCGCAGCCGCGACATTACGGGG
TTCCTCGTTGTGGGCGACAGCCTGAACCGGCTGTTCATGACAACGCTGGC
TATGGCACTCAGATCCGAGCGCCTCCCTGACCAGAGCGACAAGATTAGCG
CGGGGGGCGAGGCCTACCTGGCGTGCGGTGGGGCCCTCCGCCTCAAATTC
GTACGGAACGACATTCTGCGCGTGCAAAACATGTCAGATGACAATTCCTG
CGCAACGGAAGGAAAAATCAACATTTGCCAAAGCTTCATGCCCTACCTGG
ACGCTGGGCAGGGCTACAACGCCGTCGTGGTCAACAGCGGCGCCCACTAC
ATTGATGACGATGCATACGTCGTTTCCATGACCGTGGCAGCAGATGCAAT
TTCGGCGCGGATGAGGGAAGCGCACGCCGACTCTTCCCTCATGCTGTTTC
GCAACACGGTCCCTGGATCTCCTGACTGCGACAACTTCGAGGGCTCGCCT
CCGTTGGAACTGGGCGAAGCGGAAAGCATAGTCGCGTCAGCTAGTAATAA
GGAGCCTGAGGAAGAGTACAAACCGGGAGTATTTAAGTACAACTGGGCAG
ATTTAAAGCGGCACAACGCGCTGGCGGAACCCATTTTCGCCGCGAGGGGC
TTTGTTTTGTTAGACGTCTACACGCCAACAGTGCGGCGGTTCGACTCTCA
CATCGGTGGCGCTGATTGCCTTCACTACTGCATTCCTGGGCCAATTGACC
ACTGGATTCGCCTGTTGCAGCTCGCCCTTACCACTAGTTAG
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