mRNA_P-wetherbeei_contig10608.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: A0A6H5J9Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Y7_9PHAE) HSP 1 Score: 162 bits (409), Expect = 1.010e-41 Identity = 103/295 (34.92%), Postives = 145/295 (49.15%), Query Frame = 3 Query: 387 CDQRWA-DHHNISVTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITGFLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQNMSDDNSCATEGKINICQSFMPYLDAGQGYNAVVVNSGAHYI--DDDAYVVSMTVAADAISARMREAHADSSLMLFRNTVPGSPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIF-AARGFVLLDVYTPTVRRFDSHIGGADCLHYCIPGPIDHWIRLLQLAL 1259 C +RWA +H P W W P +CRL + FC ++ R G L GDSL + TL LR+ R+ K+ + Y AC G L L + RND L + D E I+I Q M Y Y+ ++VN+GAH +AY + AA++++A MR H DS++++ RNTVPG + + + P+ L A +V + G ++ W ++ N L E F A G LLD Y+PT+ R DSH D LHYC+PGPIDHW+ LL L Sbjct: 29 CGKRWAAEHEGEEPVPPMPYWKWEPSACRLEEVDEAKFCRVMKGRK--GLLFAGDSLTGEMIDTLRAVLRATRVKHVKLKM----DTYTACDGELTLSWYRNDYLDTRLDGFDTPRCEEPDISISQC-MTYDATLSQYDTLLVNAGAHRQLGGVEAYGSMIKTAAESLTASMRRLHGDSAILVVRNTVPGHGESFDRMFTGPVNLDTALDLV------------EKGPPEFEWTTIRDKNTLLEEAFDATHGRTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNIL 304
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: A0A6H5KFW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW9_9PHAE) HSP 1 Score: 164 bits (414), Expect = 1.810e-41 Identity = 111/327 (33.94%), Postives = 155/327 (47.40%), Query Frame = 3 Query: 342 DEGAHTIG----ASNFPFI--CDQRWADHHNIS-VTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITGFLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQNMSDDNSCATEGKIN-------ICQSFMPYLDAGQGYNAVVVNSGAHYIDDDAYVVSMTVAADAISARMREAHA-DSSLMLFRNTVPGSPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIFAA-RGFVLLDVYTPTVRRFDSHIGGADCLHYCIPGPIDHWIRLLQLALTTS*N 1274 D A+ +G S F F+ C W + TG RP W W P C L A + C + R G L+VGDSL RL TTLA LR++ L K + + ACGG ++L+F+RND+L + S E + C+ F + ++ +VVNSGAH + M +A A+++ M+ H D ++++ RNTVPG C P+ A +VA A + Y W + N + F+ RG+ LLD Y+PT+ R DSHIG +DCLHYCIPGP DHW LL L + N Sbjct: 99 DSPANMVGWEFPTSEFGFLAKCQNIWNKRKRVEGETGPRPYWAWEPTKCSLDAVSEEKLCRVLEGRK--GLLLVGDSLTRLSTTTLASILRAKSLTADLYK-----DDWEACGGKVKLRFMRNDVLDTRTKPRYRSVRCEESVGGALVNNTRCRIFATDATLRE-FDTLVVNSGAHPRPAAEFGREMEASAKALTSSMKRLHGEDKAILVVRNTVPGHWGCTERMFDAPVNKTIALKLVAEAPDS------------YEWDSFESRNVQLQKAFSPDRGWTLLDAYSPTLLRPDSHIGNSDCLHYCIPGPADHWALLLYNILLVAKN 405
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: D7FL53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL53_ECTSI) HSP 1 Score: 159 bits (403), Expect = 3.290e-40 Identity = 103/303 (33.99%), Postives = 144/303 (47.52%), Query Frame = 3 Query: 384 ICDQRWADHHNISVTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITGFLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQNMSD---DNSCATEG--KINICQSFMPYLDAGQGYNAVVVNSGAHYIDDDAYVVSMTVAADAISARMREAHADSSLMLFRNTVPGSPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIF---AARGFVLLDVYTPTVRRFDSHIGG---ADCLHYCIPGPIDHWIRLLQLAL 1259 IC Q+WA+ H P + W C L + FC A++ R G L+VGDS+ L + TL LR+ P S + AC G +++ F RND L D C + + + C+ F + Y+ +++NSGAH D Y SM A+ ++A M+ H D +L++ RNT PG C P+++ A +VAS G +Y W +NA+ E F A G+ LD YTPT+ R D H+GG DCLHYCIPGPI HW+RLL L Sbjct: 86 ICYQKWAELHGSEEP--MPYYTWDAVECSLDNVDEEKFCHALQGRK--GILLVGDSITTLMVRTLVSVLRATSEPVHSKYHLNHAHKWGACNGEVKIAFYRNDFLDTTTRRSAFWDGFCDSRNPKRNSQCEVFADDYTLEE-YDTLIINSGAHPRSLDEYRDSMGTASKELTASMKRLHGDDALLIVRNTPPGHGGCSERTFDGPVDVDTALDLVAS------------GPHQYQWGRFPEYNAMLEEAFLINATDGWKELDAYTPTLLRPDFHLGGDDNPDCLHYCIPGPIYHWVRLLYNML 371
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: A0A6H5JZZ9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ9_9PHAE) HSP 1 Score: 159 bits (401), Expect = 6.570e-40 Identity = 106/304 (34.87%), Postives = 146/304 (48.03%), Query Frame = 3 Query: 384 ICDQRWADHHNISVTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITGFLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQNMSD---DNSCATEG-KINI-CQSFMPYLDAGQGYNAVVVNSGAHYIDDDAYVVSMTVAADAISARMREAHADSSLMLFRNTVPG-SPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIF---AARGFVLLDVYTPTVRRFDSHIGG---ADCLHYCIPGPIDHWIRLLQLAL 1259 IC Q+WA+HH P + W C L + FC A+ R G L+VGDS+ L + TL LR+ S + AC G +++ F RND L D C + K N C+ F D + Y+ +++NSGAH D Y +M A+ ++A M+ H D +L++ RNT PG C P+++ A +VAS G +Y W ++NA+ E F A G+ LD YTPT+ R D H+GG DCLHYCIPGPIDHW+RLL L Sbjct: 87 ICYQKWAEHHGSEEP--MPYYTWDAAECSLEDVNEEKFCRAMEGRK--GILLVGDSITDLMVRTLVSVLRATPEQVHSKYHLNHALKWGACNGEVKIAFYRNDFLDTTTRRSAFWDGFCDSRNPKRNAQCEVFADD-DTLKEYDTLIINSGAHPRSLDEYREAMETASKKMTASMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTALDLVAS------------GPHQYQWGRFPKYNAILEEAFLSNATDGWKELDAYTPTLLRPDFHLGGDENPDCLHYCIPGPIDHWVRLLYNML 373
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: D8LHR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR2_ECTSI) HSP 1 Score: 158 bits (400), Expect = 2.870e-39 Identity = 101/296 (34.12%), Postives = 145/296 (48.99%), Query Frame = 3 Query: 387 CDQRW-ADHHNISVTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITGFLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQNMSDDNSCATEGKINICQSFMPYLDAGQG-YNAVVVNSGAHYI--DDDAYVVSMTVAADAISARMREAHADSSLMLFRNTVPGSPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIF-AARGFVLLDVYTPTVRRFDSHIGGADCLHYCIPGPIDHWIRLLQLAL 1259 C +RW A+H P W W P +CRL + FC ++ R G L GDSL + TL LR+ R+ K+ + Y AC G L L + RND L + D E I+I Q + DA Y+ ++VN+GAH +AY + A ++++A MR H D+++++ RNTVPG + + + P+ L A +V + G ++ W + N L E F A G+ LLD Y+PT+ R DSH D LHYC+PGPIDHW+ LL L Sbjct: 150 CGKRWSAEHEGEEPVPPMPYWKWEPSACRLEEVDEAKFCRVMKGRK--GLLFAGDSLTGEMIDTLRAVLRATRVKHVHLKM----DTYTACDGELTLSWYRNDFLDTRLDGFDTPRCEEPDISISQCMVFADDATLSQYDTLLVNAGAHRQLGGVEAYGSMIKTAGESLTASMRRLHGDNAILVVRNTVPGHGESFDRMFTGPVNLDTALDLV------------EKGPPEFEWTTILDKNTLLEEAFEATHGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNIL 427
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: A0A6H5J7J3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J3_9PHAE) HSP 1 Score: 157 bits (396), Expect = 1.530e-38 Identity = 103/300 (34.33%), Postives = 144/300 (48.00%), Query Frame = 3 Query: 387 CDQRW-ADHHNISVTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITGFLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQNMSDDN-SCAT-EGKINICQSFMP-YLDAG-QGYNAVVVNSGAHYIDD--DAYVVSMTVAADAISARMREAHADSSLMLFRNTVPGSPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIFAAR--GFVLLDVYTPTVRRFDSHIGGADCLHYCIPGPIDHWIRLLQLAL 1259 C +RW A+H + P W W P +CRL + FC + R G L GDSL + TLA LR+ + + + Y AC G L L + RND L + D C + ++ C F Y DA ++ +VVNSGAH +AY M A+++++ MR H D+++++ RNTVPG + + P++L A +VA G +Y W N L E F A G+ LLD Y+PT+ R DSH D LHYC+PGPIDHW+ LL L Sbjct: 165 CSERWSAEHDGVGPVPPMPYWKWEPSACRLEEVDEAKFCRVMEGRK--GLLFAGDSLTGEMIDTLAAVLRATLVKH----VPLTMDTYTACDGELTLSWYRNDFLDTRTDGFDTVHCEDPDASMSHCMVFAGMYHDATLTQFDTLVVNSGAHLRSGGLEAYGSMMKNASESLTTSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAK------------GPPRYKWTTFGDRNKLLEEAFEATNGGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNIL 446
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: D7FL51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL51_ECTSI) HSP 1 Score: 146 bits (369), Expect = 1.520e-35 Identity = 102/304 (33.55%), Postives = 141/304 (46.38%), Query Frame = 3 Query: 384 ICDQRWADHHNISVTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITGFLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQNMSD---DNSCATEG-KINI-CQSFMPYLDAGQGYNAVVVNSGAHYIDDDAYVVSMTVAADAISARMREAHADSSLMLFRNTVPG-SPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIF---AARGFVLLDVYTPTVRRFDSHIGG---ADCLHYCIPGPIDHWIRLLQLAL 1259 IC Q+WA+HH P + W C L + FC A+ R G L+VGDS+ L + + + + + AC G +++ F RND L D C + K N C+ F D + Y+ +++NSGAH D Y SM A+ ++ M+ H D +L++ RNT PG C P+++ A +VAS G +Y W +NA+ E F A G+ LD YTPT+ R D H+GG DCLHYCIPGPIDHWIRLL L Sbjct: 88 ICYQKWAEHHGSEEP--MPYYTWDAAECSLDNVDEEKFCRAMEGRK--GILLVGDSITDLMVHSKYHLNHARK--------------WGACNGEVKIAFYRNDFLDTTTRRSSFWDGFCDSRNPKRNAQCEVFADD-DTLKEYDTLIINSGAHPRSLDEYRDSMETASKELTVSMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTALDLVAS------------GPHQYQWGRFPEYNAILEEAFLINATDGWKELDAYTPTLLRPDFHLGGDDNPDCLHYCIPGPIDHWIRLLYNML 360
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: A0A6H5JU41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU41_9PHAE) HSP 1 Score: 127 bits (319), Expect = 2.850e-28 Identity = 107/354 (30.23%), Postives = 161/354 (45.48%), Query Frame = 3 Query: 387 CDQRWADHHN-ISVTGLRPLWHWCPESCRLPAFRKLDFCDAVRSRDITGFLVVGD--------------------SLNRLFMT-----TLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQ------------NMSDDNSCATEGKINI-----------CQSFMPYL--DAGQ-GYNAVVVNSGAHYIDD--DAYVVSMTVAADAISARMREAHADSSLMLFRNTVPGSPDC-DNFEG------SPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIF-AARG-FVLLDVYTPTVRRFDSHIGGADCLHYCIPGPIDHWIRLLQLAL 1259 C +RW++ H P W W P +CRL ++ FC + R G L VG+ S R +T TLA+ LR+ R+ + + G+ Y AC GAL L + RND L + ++S G +I CQ + ++ DA ++ +VVN+GAH +AY M A++ +++ MR H D+++++ RNTVPG + + +E S P+++ A +V E+ +PG Y W+ N L E F AA G + LLD Y+PT+ R DSH D LHYC+PGPID+W+ LL L Sbjct: 76 CGERWSEEHQGQGHAPPMPYWKWEPSACRLEEVDQISFCGVMEGRK--GLLFVGEGRVVRRPKKDGLAVGRKNPASSTRQLLTGEMIDTLAVILRATRV----EYVPMTGKTYSACDGALTLSWYRNDYLDTRTDGFDTVHCEDPDLSASRCVVFAGMASIKMEMVRAATMQCQPALMFIADDATLIQFDTLVVNAGAHRRSGGLEAYGSMMKNASEILTSSMRRLHGDNAILVVRNTVPGHGESYERWETAEEKMFSGPVDVDTALDLV---------EKGRPG---YLWSTFGDKNKLLEEAFVAAHGSWTLLDAYSPTILRADSHPSANDGLHYCVPGPIDNWVVLLYNIL 411
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: A0A7S0JJ27_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JJ27_9EUKA) HSP 1 Score: 125 bits (313), Expect = 5.470e-28 Identity = 90/299 (30.10%), Postives = 129/299 (43.14%), Query Frame = 3 Query: 444 WHW-CPESCRLPAFRKLDFCDAVRSRDITGFLVVGDSLNRLFMTTLAMALRSERLPDQSDKISAGGEAYLACGGALRLKFVRNDILRVQNMSDDNSCATEGKINICQSFMPYLDAG------------------------------QGYNAVVVNSGAHYIDDDAYVVSMTVAADAISARMREAHADSSLMLFRNTVPGSPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIFAARGFVLLDVYTPTVRRFDSHIGGADCLHYCIPGPIDHWIRLL 1247 W W CP LP C +R L+VGDS++ +F TLA +RL D + + CGG RL +VRND+L V + T G+ C P L G +G + V+NSGAH + DD Y M AA A R + +++++RNT G+P C + + PL +A + +A + ++W R NA+A +F A+GF + D YT T R D H DCLHYC+PGP+ HW+ L+ Sbjct: 44 WQWRCPP---LPVPDPRALCLRLRGN----ILIVGDSVSHVFAQTLAALQGGQRLQDTPSRAE-----WSVCGGRRRLTYVRNDVLDVA--ASYGGALTSGRGFNCYMRAPPLSFGAGGPTPLAVRAALQNKGGNPALCNPWSSDLRGADLAVLNSGAHGLPDDVYAAFMRAAA----AHARGHAPNGTVLVWRNTPAGTPGCAATKTAAPLPTLQAAKVHIAALG-----------WAFDWDQFARRNAIAARVFLAQGFAVADAYTGTAMRLDGH--PHDCLHYCMPGPVLHWVLLV 311
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Match: A0A6H5K9U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U7_9PHAE) HSP 1 Score: 100 bits (249), Expect = 1.910e-21 Identity = 57/141 (40.43%), Postives = 74/141 (52.48%), Query Frame = 3 Query: 858 MTVAADAISARMREAHADSSLMLFRNTVPG-SPDCDNFEGSPPLELGEAESIVASASNKEPEEEYKPGVFKYNWADLKRHNALAEPIF---AARGFVLLDVYTPTVRRFDSHIGG---ADCLHYCIPGPIDHWIRLLQLAL 1259 M A+ I+A M+ H D +L++ RNT PG C P+++ A +VAS G +Y W +NA+ E F A G+ LD YTPT+ R D H+GG DCLHYCIPGPIDHW+RLL L Sbjct: 1 METASKEITASMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTAIDLVAS------------GPHQYQWGRFPEYNAILEEAFLGNATDGWKELDAYTPTLLRPDFHLGGDENPDCLHYCIPGPIDHWVRLLYSML 129 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10608.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10608.1.2 >prot_P-wetherbeei_contig10608.1.2 ID=prot_P-wetherbeei_contig10608.1.2|Name=mRNA_P-wetherbeei_contig10608.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=397bp MLLLLESVCKWAARIGIGLGCVIVGTLCHHHLGLASAAVPVLSVAGLDDPback to top mRNA from alignment at P-wetherbeei_contig10608:111..2311+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10608.1.2 ID=mRNA_P-wetherbeei_contig10608.1.2|Name=mRNA_P-wetherbeei_contig10608.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2201bp|location=Sequence derived from alignment at P-wetherbeei_contig10608:111..2311+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10608:111..2311+ >mRNA_P-wetherbeei_contig10608.1.2 ID=mRNA_P-wetherbeei_contig10608.1.2|Name=mRNA_P-wetherbeei_contig10608.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1191bp|location=Sequence derived from alignment at P-wetherbeei_contig10608:111..2311+ (Phaeothamnion wetherbeei SAG_119_79)back to top |