mRNA_P-wetherbeei_contig10603.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10603.1.1
Unique NamemRNA_P-wetherbeei_contig10603.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10603.1.1 vs. uniprot
Match: A0A3L7QG65_9BACT (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Planctomycetes TaxID=203682 RepID=A0A3L7QG65_9BACT)

HSP 1 Score: 144 bits (364), Expect = 2.440e-42
Identity = 71/112 (63.39%), Postives = 85/112 (75.89%), Query Frame = 1
Query:    1 TVKTPTGLGYRILKEGDGAVAEAGKTVSVHYTGYFK-NGVTFDSSIPRGEPIEFGLGAHQVIAGWDEGIAGMKVGEERVLFIPSKLAYGSRGAGRSIPPNTDLYFEVKLVGV 333
            T+KT +GL Y +LKEG G  A+AGK V+VHYTG+ K NG  FDSS+ RGEP  FGLGA  VI GWDEG+AGMK+GE+R L IP  L YG+RGAG  IPPN DL FEV+L+ +
Sbjct:   26 TMKTASGLEYEVLKEGTGDEAKAGKKVTVHYTGWLKSNGKKFDSSVDRGEPFVFGLGAGMVIKGWDEGVAGMKIGEKRKLTIPPDLGYGARGAGGVIPPNADLIFEVELLKI 137          
BLAST of mRNA_P-wetherbeei_contig10603.1.1 vs. uniprot
Match: A0A1E4G156_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=bacterium SCN 62-11 TaxID=1660156 RepID=A0A1E4G156_9BACT)

HSP 1 Score: 143 bits (360), Expect = 5.210e-42
Identity = 68/110 (61.82%), Postives = 82/110 (74.55%), Query Frame = 1
Query:    4 VKTPTGLGYRILKEGDGAVAEAGKTVSVHYTGYFKNGVTFDSSIPRGEPIEFGLGAHQVIAGWDEGIAGMKVGEERVLFIPSKLAYGSRGAGRSIPPNTDLYFEVKLVGV 333
            V T +GL Y++L EG GA A AG+ V+VHYTG+  NG  FDSS+ R +P  F LG  QVIAGWDEG+AGMKVGE+R L IP+ L YGSRGAG  IPPN  L F+V+L+GV
Sbjct:    7 VTTSSGLKYQVLTEGTGAEARAGQQVTVHYTGWLTNGTKFDSSVDRNDPFRFNLGGRQVIAGWDEGVAGMKVGEKRKLTIPADLGYGSRGAGGVIPPNATLVFDVELLGV 116          
BLAST of mRNA_P-wetherbeei_contig10603.1.1 vs. uniprot
Match: A0A350WNB9_9CHLR (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A350WNB9_9CHLR)

HSP 1 Score: 140 bits (354), Expect = 3.550e-41
Identity = 73/111 (65.77%), Postives = 81/111 (72.97%), Query Frame = 1
Query:    4 VKTPTGLGYRILKEGDGAVAEAGKTVSVHYTGYFKNGVTFDSSIPRGEPIEFGLGAHQVIAGWDEGIAGMKVGEERVLFIPSKLAYGSRGAGRSIPPNTDLYFEVKLVGVK 336
            +KT +GL Y  ++ G G  AEAGKTVSVHYTG F NG  FDSSIPRGEPI F LG  QVI GWDEGIA MKVG +  L IP+ LAYG RGAG  IPPN  L F+V+LV VK
Sbjct:    1 MKTASGLEYIEVEAGTGTQAEAGKTVSVHYTGKFTNGKVFDSSIPRGEPITFKLGVGQVIKGWDEGIALMKVGGKAQLVIPANLAYGERGAGGVIPPNATLMFDVELVDVK 111          
BLAST of mRNA_P-wetherbeei_contig10603.1.1 vs. uniprot
Match: A0A136KXQ0_9CHLR (Peptidyl-prolyl cis-trans isomerase n=6 Tax=Chloroflexi TaxID=200795 RepID=A0A136KXQ0_9CHLR)

HSP 1 Score: 140 bits (352), Expect = 7.160e-41
Identity = 72/111 (64.86%), Postives = 83/111 (74.77%), Query Frame = 1
Query:    4 VKTPTGLGYRILKEGDGAVAEAGKTVSVHYTGYFKNGVTFDSSIPRGEPIEFGLGAHQVIAGWDEGIAGMKVGEERVLFIPSKLAYGSRGAGRSIPPNTDLYFEVKLVGVK 336
            +KT +GL Y  ++ G GA AEAGKTV+VHYTG F++G  FDSS+ RGEPIEF LGA QVI GWDEGIA MKVG +  L IP  LAYG RGAG  IPPN  L F+V+LV VK
Sbjct:    1 MKTASGLEYIEVEAGTGAQAEAGKTVAVHYTGKFQDGGVFDSSVSRGEPIEFKLGAGQVIKGWDEGIALMKVGGKAQLIIPPNLAYGERGAGGVIPPNATLVFDVELVNVK 111          
BLAST of mRNA_P-wetherbeei_contig10603.1.1 vs. uniprot
Match: A0A3A0GHC0_9PROT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3A0GHC0_9PROT)

HSP 1 Score: 140 bits (354), Expect = 8.100e-41
Identity = 68/113 (60.18%), Postives = 82/113 (72.57%), Query Frame = 1
Query:   10 TPTGLGYRILKEGDGAVAEAGKTVSVHYTGYFKN----GVTFDSSIPRGEPIEFGLGAHQVIAGWDEGIAGMKVGEERVLFIPSKLAYGSRGAGRSIPPNTDLYFEVKLVGVK 336
            T +GL Y I K G G  AE GK V VHYTG+  +    G  FDSS+ RG+P EF LG  QVI GWDEG+AGMK+GE+R L IPSKL YG+RGAG +IPPN DL F+V+L+GV+
Sbjct:   26 TTSGLSYEITKPGTGTAAEKGKKVKVHYTGWLDDKGSKGNKFDSSLDRGQPFEFTLGVGQVIQGWDEGVAGMKIGEQRTLMIPSKLGYGARGAGGAIPPNADLIFDVELLGVQ 138          
BLAST of mRNA_P-wetherbeei_contig10603.1.1 vs. uniprot
Match: A0A7C4Z9G3_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7C4Z9G3_9BACT)

HSP 1 Score: 140 bits (353), Expect = 1.260e-40
Identity = 69/111 (62.16%), Postives = 83/111 (74.77%), Query Frame = 1
Query:    4 VKTPTGLGYRILKEGDGAVAEAGKTVSVHYTGYFKNGVTFDSSIPRGEPIEFGLGAHQVIAGWDEGIAGMKVGEERVLFIPSKLAYGSRGAGRSIPPNTDLYFEVKLVGVK 336
            VKT +GL Y  LKEG GA A+ G TV VHYTG+ K+G  FDSS+ RG+P  F LGA +VI GWDEG+AGMKVG +R L IP+ LAYG RGAG  IPPN +L FEV+L+ +K
Sbjct:   31 VKTDSGLQYVELKEGTGAAAKKGDTVEVHYTGWLKDGKKFDSSVDRGQPFVFPLGAGRVIKGWDEGVAGMKVGGKRKLIIPAALAYGERGAGGVIPPNAELTFEVELLKIK 141          
BLAST of mRNA_P-wetherbeei_contig10603.1.1 vs. uniprot
Match: A0A3D2UP99_9CHLR (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A3D2UP99_9CHLR)

HSP 1 Score: 139 bits (349), Expect = 2.050e-40
Identity = 72/111 (64.86%), Postives = 82/111 (73.87%), Query Frame = 1
Query:    4 VKTPTGLGYRILKEGDGAVAEAGKTVSVHYTGYFKNGVTFDSSIPRGEPIEFGLGAHQVIAGWDEGIAGMKVGEERVLFIPSKLAYGSRGAGRSIPPNTDLYFEVKLVGVK 336
            +KT +GL Y  L+EG GA AEAGKTVSVHYTG F++G  FDSS+ RGEPIEF LG   VI GWDEGIA MKVG +  L IP  LAYG +GAG  IPPN  L F+V+LV VK
Sbjct:    1 MKTQSGLDYIELEEGKGAQAEAGKTVSVHYTGKFQDGGVFDSSVSRGEPIEFVLGQGMVIKGWDEGIAMMKVGGKAQLIIPPDLAYGEKGAGGVIPPNATLVFDVELVKVK 111          
BLAST of mRNA_P-wetherbeei_contig10603.1.1 vs. uniprot
Match: A0A837I0T3_9BACT (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Parcubacteria group TaxID=1794811 RepID=A0A837I0T3_9BACT)

HSP 1 Score: 140 bits (352), Expect = 2.990e-40
Identity = 68/106 (64.15%), Postives = 80/106 (75.47%), Query Frame = 1
Query:   19 GLGYRILKEGDGAVAEAGKTVSVHYTGYFKNGVTFDSSIPRGEPIEFGLGAHQVIAGWDEGIAGMKVGEERVLFIPSKLAYGSRGAGRSIPPNTDLYFEVKLVGVK 336
            G+   ILKEG GA+A+ G TVS HY G  +NG  FDSS+ RG P EF LGA QVI GWD G+ GMKVGE R L IPS LAYGSRGAG +IPPN++L FEV+L+G+K
Sbjct:   53 GVQVEILKEGAGAIAKKGDTVSAHYVGTLENGTKFDSSVDRGTPFEFSLGAGQVIPGWDIGVEGMKVGEVRRLGIPSALAYGSRGAGEAIPPNSNLIFEVQLLGIK 158          
BLAST of mRNA_P-wetherbeei_contig10603.1.1 vs. uniprot
Match: A0A537RCM9_9PROT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RCM9_9PROT)

HSP 1 Score: 139 bits (351), Expect = 3.040e-40
Identity = 68/115 (59.13%), Postives = 82/115 (71.30%), Query Frame = 1
Query:    4 VKTPTGLGYRILKEGDGAVAEAGKTVSVHYTGYFKN----GVTFDSSIPRGEPIEFGLGAHQVIAGWDEGIAGMKVGEERVLFIPSKLAYGSRGAGRSIPPNTDLYFEVKLVGVK 336
            ++ P GL Y   K GDGA A  G  VSVHYTG+  N    G  FDSS+ RG+P +F LGAHQVIAGWDEG+AGMKVG +R L IP +L YG+RGAG  IPPN  L F+V+L+GV+
Sbjct:   33 IEMPNGLKYTDTKTGDGAAATPGNKVSVHYTGWLYNNGAKGAKFDSSVDRGQPFQFTLGAHQVIAGWDEGVAGMKVGGKRTLIIPPELGYGARGAGGVIPPNATLMFDVELLGVQ 147          
BLAST of mRNA_P-wetherbeei_contig10603.1.1 vs. uniprot
Match: UPI001F0FC9AB (FKBP-type peptidyl-prolyl cis-trans isomerase n=2 Tax=unclassified Paludisphaera TaxID=2624067 RepID=UPI001F0FC9AB)

HSP 1 Score: 139 bits (351), Expect = 3.760e-40
Identity = 70/114 (61.40%), Postives = 83/114 (72.81%), Query Frame = 1
Query:    7 KTPTGLGYRILKEGDGAVAEAGKTVSVHYTGYF----KNGVTFDSSIPRGEPIEFGLGAHQVIAGWDEGIAGMKVGEERVLFIPSKLAYGSRGAGRSIPPNTDLYFEVKLVGVK 336
            KT +GL YR  KEG GAVA+AG T  +HYTG+     K G  FDSS+ R EP +F LGA  VI GWDEG+AGMKVG +R L IP+KL YG+RGAG  IPPN  LYFEV+L+GV+
Sbjct:   41 KTDSGLEYRDAKEGTGAVAKAGNTCKMHYTGWLWEDGKKGKKFDSSLDRDEPFDFPLGAGMVIKGWDEGVAGMKVGGKRELLIPAKLGYGARGAGGVIPPNATLYFEVELLGVR 154          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10603.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3L7QG65_9BACT2.440e-4263.39Peptidyl-prolyl cis-trans isomerase n=3 Tax=Planct... [more]
A0A1E4G156_9BACT5.210e-4261.82Peptidyl-prolyl cis-trans isomerase n=1 Tax=bacter... [more]
A0A350WNB9_9CHLR3.550e-4165.77Peptidyl-prolyl cis-trans isomerase n=1 Tax=Anaero... [more]
A0A136KXQ0_9CHLR7.160e-4164.86Peptidyl-prolyl cis-trans isomerase n=6 Tax=Chloro... [more]
A0A3A0GHC0_9PROT8.100e-4160.18Peptidyl-prolyl cis-trans isomerase n=1 Tax=Proteo... [more]
A0A7C4Z9G3_9BACT1.260e-4062.16Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmat... [more]
A0A3D2UP99_9CHLR2.050e-4064.86Peptidyl-prolyl cis-trans isomerase n=4 Tax=Anaero... [more]
A0A837I0T3_9BACT2.990e-4064.15Peptidyl-prolyl cis-trans isomerase n=2 Tax=Parcub... [more]
A0A537RCM9_9PROT3.040e-4059.13Peptidyl-prolyl cis-trans isomerase n=1 Tax=Alphap... [more]
UPI001F0FC9AB3.760e-4061.40FKBP-type peptidyl-prolyl cis-trans isomerase n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10603contigP-wetherbeei_contig10603:84..425 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog906888.JCM19314_3467
Preferred nameppiC
PFAMsFKBP_C,Pro_isomerase
Model size342
Max annot lvl976|Bacteroidetes
KEGG koko:K01802,ko:K03767,ko:K03772
KEGG Pathwayko01503,ko04217,map01503,map04217
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.71e-39
EggNOG OGsCOG0545@1|root,COG0652@1|root,COG0545@2|Bacteria,COG0652@2|Bacteria,4NDW4@976|Bacteroidetes,1HYBT@117743|Flavobacteriia,3HJXM@363408|Nonlabens
EC5.2.1.8
DescriptionCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Cds size342
COG categoryO
BRITEko00000,ko00001,ko01000,ko03110,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185877.1135752-CDS-P-wetherbeei_contig10603:83..4251683185877.1135752-CDS-P-wetherbeei_contig10603:83..425Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10603 84..425 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10603.1.1prot_P-wetherbeei_contig10603.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10603 84..425 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10603.1.1

>prot_P-wetherbeei_contig10603.1.1 ID=prot_P-wetherbeei_contig10603.1.1|Name=mRNA_P-wetherbeei_contig10603.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=114bp
TVKTPTGLGYRILKEGDGAVAEAGKTVSVHYTGYFKNGVTFDSSIPRGEP
IEFGLGAHQVIAGWDEGIAGMKVGEERVLFIPSKLAYGSRGAGRSIPPNT
DLYFEVKLVGVKG*
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mRNA from alignment at P-wetherbeei_contig10603:84..425-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10603.1.1 ID=mRNA_P-wetherbeei_contig10603.1.1|Name=mRNA_P-wetherbeei_contig10603.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=342bp|location=Sequence derived from alignment at P-wetherbeei_contig10603:84..425- (Phaeothamnion wetherbeei SAG_119_79)
ACGGTGAAGACTCCTACGGGTCTTGGCTATCGCATCCTTAAAGAGGGCGA CGGCGCCGTCGCGGAGGCCGGCAAGACGGTTTCCGTACACTACACTGGCT ATTTCAAGAATGGCGTCACTTTCGACTCCAGCATCCCGCGCGGCGAGCCC ATCGAGTTCGGCCTGGGCGCCCATCAGGTCATCGCCGGATGGGACGAGGG TATCGCTGGCATGAAAGTAGGGGAGGAGCGTGTGCTCTTCATCCCGTCCA AACTCGCCTACGGTTCGCGCGGCGCGGGTCGCTCGATTCCGCCCAATACG GACCTCTATTTCGAGGTTAAGCTGGTCGGCGTCAAGGGTTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10603:84..425-

>mRNA_P-wetherbeei_contig10603.1.1 ID=mRNA_P-wetherbeei_contig10603.1.1|Name=mRNA_P-wetherbeei_contig10603.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=342bp|location=Sequence derived from alignment at P-wetherbeei_contig10603:84..425- (Phaeothamnion wetherbeei SAG_119_79)
ACGGTGAAGACTCCTACGGGTCTTGGCTATCGCATCCTTAAAGAGGGCGA
CGGCGCCGTCGCGGAGGCCGGCAAGACGGTTTCCGTACACTACACTGGCT
ATTTCAAGAATGGCGTCACTTTCGACTCCAGCATCCCGCGCGGCGAGCCC
ATCGAGTTCGGCCTGGGCGCCCATCAGGTCATCGCCGGATGGGACGAGGG
TATCGCTGGCATGAAAGTAGGGGAGGAGCGTGTGCTCTTCATCCCGTCCA
AACTCGCCTACGGTTCGCGCGGCGCGGGTCGCTCGATTCCGCCCAATACG
GACCTCTATTTCGAGGTTAAGCTGGTCGGCGTCAAGGGTTAA
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