mRNA_P-wetherbeei_contig10595.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10595.1.1
Unique NamemRNA_P-wetherbeei_contig10595.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10595.1.1 vs. uniprot
Match: A0A835Z0K9_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0K9_9STRA)

HSP 1 Score: 230 bits (587), Expect = 7.240e-69
Identity = 228/271 (84.13%), Postives = 246/271 (90.77%), Query Frame = 1
Query:    1 SVVWGWSKVDPNFDDGARVAPCQRSLHVAAVLNDSIYVFGGYDGSNRVNDFYEFSIPTRVWTLVPAAGRPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQASAGVAPSPRHSHAAVVYGNSMFVFGGYDGSYRSDFHEFDLESRVWTAVGAAGRXXXXXXXXXXXXXXXXXXXXXXXXXTRHLNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSAMNDFHELRLDVCKWSPVQALGLTPN 813
            S VWGWS+++P+ D+G + APCQRSLHVA VL D +Y+FGGYDGSNRVNDFYEF IPTR W++V A+G PPS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ  +GVAPSPRHSHAAVVYG+SMFVFGGYDGSYRSDFHE++  +  W+ V AAGRXXXXXXXXXXXXXXXXXXXXXXXXXTRHLN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TGSAMNDF+ELRLD CKWSPVQALG  PN
Sbjct:   14 SAVWGWSRLEPSLDNGGQPAPCQRSLHVAVVLEDKMYIFGGYDGSNRVNDFYEFDIPTRRWSIVSASGTPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVLSGVAPSPRHSHAAVVYGSSMFVFGGYDGSYRSDFHEYNFATCGWSLVSAAGRXXXXXXXXXXXXXXXXXXXXXXXXXTRHLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGSAMNDFYELRLDTCKWSPVQALGNPPN 284          
BLAST of mRNA_P-wetherbeei_contig10595.1.1 vs. uniprot
Match: A0A7S4JL38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JL38_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.320e-38
Identity = 153/240 (63.75%), Postives = 174/240 (72.50%), Query Frame = 1
Query:   61 PCQRSLHVAAVLNDSIYVFGGYDGSNRVNDFYEFSIPTRVWT-LVPAAGR--PPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQASAGVAPSPRHSHAAVVYGNSMFVFGGYDGSYRSDFHEFDLESRVWTAVGAAGRXXXXXXXXXXXXXXXXXXXXXXXXXTRHLNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSAMNDFHELRLDV 771
            PCQRSLH AAVL+ S+YVFGGYDG +R+NDF+ +S P + W+ ++PAAG   PPSP                                             G APSPRHSH+AVV+ +SMFVFGGYDGSYRSDFHE++ ++R W+ V +A  XXXXXXXXXXXXXXXXXXXXXXXXXTRHL+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSAMND HELR+DV
Sbjct:   37 PCQRSLHAAAVLHSSLYVFGGYDGQSRINDFHAYSFPEKRWSPVLPAAGSGPPPSPRDRHVAVVWGDGFYVFGGFDGTSRVADFYGFELSSMTWSRVTGRGGNAPSPRHSHSAVVWEDSMFVFGGYDGSYRSDFHEYNFQTRTWSVVPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXTRHLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSAMNDLHELRMDV 276          
BLAST of mRNA_P-wetherbeei_contig10595.1.1 vs. uniprot
Match: A0A7S1XQV5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQV5_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.380e-38
Identity = 154/256 (60.16%), Postives = 167/256 (65.23%), Query Frame = 1
Query:   31 PNFDDGARVAPCQRSLHVAAVLNDSIYVFGGYDGSNRVNDFYEFSIPTRVWTLVPAA-GRPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAS--AGVAPSPRHSHAAVVYGNSMFVFGGYDGSYRSDFHEFDLESRVWTAVGAAGRXXXXXXXXXXXXXXXXXXXXXXXXXTRHLNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSAMNDFHELRLDVCKWSPV 789
            P  +DG   AP QRSLHV  V  D +YVFGGYDG  RVND YEF +  ++W   PA  G PPSP                                              +G  PSPRHSHAA VY +S++VFGGYDGSYRSDFHEF+  +  W  V AAGR XXXXXXXXXXXXXXXXXXXXXXXXTRHLND  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTG+AMNDFHEL L  C W  +
Sbjct:   46 PAPEDGPHQAPRQRSLHVTVVYEDKLYVFGGYDGFGRVNDLYEFHLRDQIWRETPATNGIPPSPRDRHIGVVHGSCMYVFGGYDGSNRINDFHEYNFTTHTWDSVTVDVISGAPPSPRHSHAAAVYRDSLYVFGGYDGSYRSDFHEFNFLTAKWEQVTAAGRVXXXXXXXXXXXXXXXXXXXXXXXXTRHLNDVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGAAMNDFHELNLKRCCWRQI 301          
BLAST of mRNA_P-wetherbeei_contig10595.1.1 vs. uniprot
Match: B7FPQ5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPQ5_PHATC)

HSP 1 Score: 138 bits (348), Expect = 1.840e-33
Identity = 162/287 (56.45%), Postives = 182/287 (63.41%), Query Frame = 1
Query:   13 GWSKVDPNFDDG-ARVAPCQRSLHVAAVLNDSIYVFGGYDGSNRVNDFYEFSIPTRVWTLV-PAAGR--PPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQASAGVAPSPRHSHAAVVYGNSMFVFGGYDGSYRSDFHEFDLESRVWTAVGAAGRXXXXXXXXXXXXXXXXXXXXXXXXXTRHLNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSAMNDFHELRLDV-----CKWSPVQALGLT-PNNRFCHVASVY 843
            GWS V  + D G   V P  RSLH  A+LN + Y FGGYDG+ RVN F+ FS   + W+ V P+A    PP+P                                          A  G  PSPRHSHAAVV+G+SM++FGGYDGSY+SD HEFD  +  W AV A   XXXXXXXXXXXXXXXXXXXXXXXXXTRHL+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSAMND HEL+L        KW  + A     P +RFCHVA V+
Sbjct:  144 GWSDVAHSQDHGNGGVPPSPRSLHAGALLNGNFYTFGGYDGNQRVNTFHAFSFAEKRWSPVFPSANSSPPPTPRDRHVAVAFGNAFYVHGGFDGTSRVADFWAFDFSTMSWREIVALQGRHPSPRHSHAAVVHGHSMYIFGGYDGSYKSDLHEFDFTTSRWNAVPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXTRHLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSAMNDLHELQLPSSSSMSAKWRSINASHAEQPRHRFCHVAVVH 430          
BLAST of mRNA_P-wetherbeei_contig10595.1.1 vs. uniprot
Match: A0A7S3JNQ4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JNQ4_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.130e-33
Identity = 198/292 (67.81%), Postives = 215/292 (73.63%), Query Frame = 1
Query:   40 DDGARVAPCQRSLHVAAVLNDSIYVFGGYDGSNRVNDFYEFSIPTRVWTLVPAAGRPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQASAGVAPSPRHSHAAVVYGNSMFVFGGYDGSYRSDFHEFDLESRVWTAVGAAGRXXXXXXXXXXXXXXXXXXXXXXXXXTRHLNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSAMNDFHELRLDVCKWSPV-----------------------QALGLTPNNRFCHVASVYK 846
            DDG    PCQRSLHVAAV  D + +FGGYDGSNRVND + +S     W+LV   G PPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    G  PS RHSHA VVY +S+++FGGYDG+YRSDFHEF+  +  W  + A GR XXXXXXXXXXXXXXXXXXXXXXXX RHLN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TG AM+DF+ LRLD   WS V                        A  + P  RFCHVA  Y+
Sbjct:    9 DDG----PCQRSLHVAAVWRDKLIIFGGYDGSNRVNDLWLYSFTQEEWSLVRGGGMPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMNGQPPSARHSHAGVVYLDSVYIFGGYDGAYRSDFHEFNFITSSWCPIIAEGRAXXXXXXXXXXXXXXXXXXXXXXXXHRHLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGIAMDDFYVLRLDTANWSHVIENNNQIDTTSQDDQDIEHDTDTNASIIHPGARFCHVAVEYR 296          
BLAST of mRNA_P-wetherbeei_contig10595.1.1 vs. uniprot
Match: A0A1Z5JZ00_FISSO (BTB domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZ00_FISSO)

HSP 1 Score: 136 bits (343), Expect = 9.270e-33
Identity = 132/294 (44.90%), Postives = 160/294 (54.42%), Query Frame = 1
Query:   13 GWSKVDPNFDDGAR--VAPCQRSLHVAAVLNDSIYVFGGYDGSNRVNDFYEFSIPTRVWTLV---PAAGRPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQASA--GVAPSPRHSHAAVVYGNSMFVFGGYDGSYRSDFHEFDLESRVWTAVGAAGRXXXXXXXXXXXXXXXXXXXXXXXXXTRHLNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSAMNDFHELRLDV--------CKWSPVQALG--LTPNNRFCHVASVY 843
            GWS+V+   + G    +AP  RSLH  AVLN ++Y+FGGYDG+ RVN F+ FS   + W+ V   P +  PPSP                                           S   G  PSPRHSH+AVVYG+S+F+  GYDGSY+SD HE+D  +  W+AV A GR                          RHL+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TGSAMNDF+EL+L           +W P+++      P  RFCHV  V+
Sbjct:  146 GWSQVEMAREPGGAPSIAPSPRSLHAGAVLNGAMYIFGGYDGTQRVNTFHAFSFIEKRWSPVLPSPHSPPPPSPRDRHVAFVFGNSFYVHGGFNGHSRVADMFGFDFSTMTWREISMSGMTGRVPSPRHSHSAVVYGHSLFIAFGYDGSYKSDIHEYDFVNSRWSAVAAGGRRPRPRYRATTEVHKNYMLVFGGHDGVRHLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGSAMNDFYELQLPAGTLDSSAAARWRPIKSSSRDFEPRPRFCHVGVVH 439          
BLAST of mRNA_P-wetherbeei_contig10595.1.1 vs. uniprot
Match: A0A7S2L3Z8_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L3Z8_9STRA)

HSP 1 Score: 130 bits (327), Expect = 9.210e-31
Identity = 147/249 (59.04%), Postives = 165/249 (66.27%), Query Frame = 1
Query:   58 APCQRSLHVAAVLNDSIYVFGGYDGSNRVNDFYEFSIPTRVWTLV---PAAGRPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQASAGVAPSPRHSHAAVVYGNSMFVFGGYDGSYRSDFHEFDLESRVWTAVGAAGRXXXXXXXXXXXXXXXXXXXXXXXXXTRHLNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSAMNDFHELRLD--VCKWSPV 789
            APCQRSLH AAV+N+++YVFGGY+G  RVNDF++F    + W+ +   P +G PPSP                                           S+G  PSPRHSHAAVV+ +SM++FGGYDGSYRSDFHEF   +  W  V     XXXXXXXXXXXXXXXXXXXXXXXXXTRHL D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AMND H+L L     KWSPV
Sbjct:   98 APCQRSLHSAAVVNNAMYVFGGYEGQRRVNDFHKFDFMEKKWSPMIASPLSGPPPSPRDRHVSVAYRNAFYVFGGFDGSSRVSDFFCFDLAEMVWRQITPSSGTPPSPRHSHAAVVHKDSMYIFGGYDGSYRSDFHEFKFTNSSWVLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRHLADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMNDLHQLNLSHTPAKWSPV 346          
BLAST of mRNA_P-wetherbeei_contig10595.1.1 vs. uniprot
Match: A0A4D9CMR4_9STRA (BTB domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMR4_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.070e-29
Identity = 85/271 (31.37%), Postives = 103/271 (38.01%), Query Frame = 1
Query:   61 PCQRSLHVAAVLNDSIYVFGGYDGSNRVNDFYEFSIPTRVWTLV-PAAGR--PPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQASAGVAPSPRHSHAAVVYGNSMFVFGGYDGSYRSDFHEFDLESRVWTAVGAAGRXXXXXXXXXXXXXXXXXXXXXXXXXTRHLNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----TGSAMNDFHELRLDVCKWSPVQAL--GLTPNNRFCHVASVYK 846
            PCQRSLHVAAVL+D + VFGGY G+ RV D Y +    + W++V PA G   PPSP                                             G AP+PRHSH  VVY +  +V  GYDGSYR+DFH F      W     AG+                         T+HLND                                              TG+AM+D HEL L+  KW P+      L P  RFCHVA V+K
Sbjct:  224 PCQRSLHVAAVLDDKLLVFGGYQGTERVADCYLYDFLRQKWSVVVPAPGSHPPPSPRDRHVGVVHRRSFYVFGGFDGSQRVNDFYGFSLDTREWRPVVCLTGSAPTPRHSHTGVVYKDKFYVLTGYDGSYRNDFHAFSFGQASWAPXACAGKVPRPRYRATACVKNDDLILFGGHDGTQHLNDVSLFHFPSATWTLLDLSPSAPYPPPLPRDSHSAVIHHESMYIFGGSTGNAMDDLHELNLEEKKWRPISPPPGSLMPGQRFCHVACVWK 494          
BLAST of mRNA_P-wetherbeei_contig10595.1.1 vs. uniprot
Match: A0A813EMQ7_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EMQ7_POLGL)

HSP 1 Score: 119 bits (297), Expect = 2.820e-29
Identity = 100/168 (59.52%), Postives = 119/168 (70.83%), Query Frame = 1
Query:    1 SVVWGWSKVDPNFDDGARVAPCQRSLHVAAVLNDSIYVFGGYDGSNRVNDFYEFSIPTRVWTLVPAAGRPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQASAGVAPSPRHSHAAVVYGNSMFVFGGYDGSYRSDFHEFDLESRVWTAVGAAG 504
            S +  WS V      G  + P QRSLH   V+ D +Y+FGGYDGSNRVNDF++FS     W+ +  AG  PS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +A+ G  P+PRHSH+ V Y  SM++F GYDG+YRSDFH ++   R W+ V   G
Sbjct:   17 SSINQWSLVKQT---GGCLPPKQRSLHAGIVVGDCLYIFGGYDGSNRVNDFFKFSFKASKWSQLNVAGASPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEATLGNPPTPRHSHSGVEYDGSMYIFAGYDGNYRSDFHRYNFSQRKWSIVPVKG 181          
BLAST of mRNA_P-wetherbeei_contig10595.1.1 vs. uniprot
Match: A0A7S1V2Y6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V2Y6_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.580e-28
Identity = 148/275 (53.82%), Postives = 173/275 (62.91%), Query Frame = 1
Query:   46 GARVAPCQRSLHVAAVLNDSIYVFGGYDGSNRVNDFYEFSIPTRVWT-LVPAA--GRPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQASAGVAPSPRHSHAAVVYGNSMFVFGGYDGSYRSDFHEFDLESRVWTAVGAAGRXXXXXXXXXXXXXXXXXXXXXXXXXTRHLNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSAMNDFHELRLDVC---KWSPVQALGLT--PNNRFCHVASVYK 846
            G+   PC+RSLH  +VLN    VFGGY G  RVNDF+ +S   + W+ ++P+A  GRPPSP                                            +G  PS RHSH+AVV+   M VFGGYDGSY+SD HEFD     W ++  A  XXXXXXXXXXXXXXXXXXXXXXXXXTRHLN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GSAMND HEL++      KW  ++   +   P +RFCHV + ++
Sbjct:  182 GSGTPPCERSLHAGSVLNGVFLVFGGYSGQTRVNDFHAYSFAEKRWSPVLPSANSGRPPSPRDRHTGVVYGNSFYVYGGFDGTSRVSDFFGFDFSSMTWREIIPLSGRPPSDRHSHSAVVFHQKMLVFGGYDGSYKSDLHEFDFSQSKWASMQTAXXXXXXXXXXXXXXXXXXXXXXXXXXXTRHLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAMNDLHELQISSTGPSKWRQIKPPNIEQQPTHRFCHVGACHE 456          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10595.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z0K9_9STRA7.240e-6984.13BTB domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S4JL38_9STRA1.320e-3863.75Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S1XQV5_9STRA2.380e-3860.16Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
B7FPQ5_PHATC1.840e-3356.45Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3JNQ4_9STRA3.130e-3367.81Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A1Z5JZ00_FISSO9.270e-3344.90BTB domain-containing protein n=2 Tax=Fistulifera ... [more]
A0A7S2L3Z8_9STRA9.210e-3159.04Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A4D9CMR4_9STRA1.070e-2931.37BTB domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A813EMQ7_POLGL2.820e-2959.52Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A7S1V2Y6_9STRA1.580e-2853.82Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10595contigP-wetherbeei_contig10595:330..2102 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2850.Phatr42834
PFAMsBTB,Kelch_1
Model size846
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.02e-34
EggNOG OGsKOG0379@1|root,KOG0379@2759|Eukaryota,2XEKX@2836|Bacillariophyta
Ec32 ortholog descriptionBTB/POZ
Ec32 orthologEc-18_003170.2
DescriptionKelch motif
Cds size846
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185876.4781666-CDS-P-wetherbeei_contig10595:329..4501683185876.4781666-CDS-P-wetherbeei_contig10595:329..450Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10595 330..450 +
1683185876.4866915-CDS-P-wetherbeei_contig10595:749..10741683185876.4866915-CDS-P-wetherbeei_contig10595:749..1074Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10595 750..1074 +
1683185876.495253-CDS-P-wetherbeei_contig10595:1516..17411683185876.495253-CDS-P-wetherbeei_contig10595:1516..1741Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10595 1517..1741 +
1683185876.503113-CDS-P-wetherbeei_contig10595:1927..21021683185876.503113-CDS-P-wetherbeei_contig10595:1927..2102Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10595 1928..2102 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10595.1.1prot_P-wetherbeei_contig10595.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10595 330..2102 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10595.1.1

>prot_P-wetherbeei_contig10595.1.1 ID=prot_P-wetherbeei_contig10595.1.1|Name=mRNA_P-wetherbeei_contig10595.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=282bp
SVVWGWSKVDPNFDDGARVAPCQRSLHVAAVLNDSIYVFGGYDGSNRVND
FYEFSIPTRVWTLVPAAGRPPSPRDRHTGVVHGNSFYVFAGFDGTQRVND
FFEFSFATKQWAPVQASAGVAPSPRHSHAAVVYGNSMFVFGGYDGSYRSD
FHEFDLESRVWTAVGAAGRVPRARYRATCVVHGTCLYLFGGHDGTRHLND
VHVFDFEPRVWVTLNTEGPPPIPRDSHVAVIHGKSMYVFGGSTGSAMNDF
HELRLDVCKWSPVQALGLTPNNRFCHVASVYK
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mRNA from alignment at P-wetherbeei_contig10595:330..2102+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10595.1.1 ID=mRNA_P-wetherbeei_contig10595.1.1|Name=mRNA_P-wetherbeei_contig10595.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1773bp|location=Sequence derived from alignment at P-wetherbeei_contig10595:330..2102+ (Phaeothamnion wetherbeei SAG_119_79)
TCCGTCGTGTGGGGATGGTCGAAGGTCGACCCCAACTTCGATGACGGCGC CCGTGTCGCCCCATGCCAGCGGTCGCTGCATGTTGCAGCCGTGCTCAACG ACAGCATCTATGTTTTCGGAGGTACGTCTACGTTTTTTCTTGGGAGTTGC AAGAAGAGGATGGGGCGGTGGTGGGAAAAGAGGAGAAGCGCCGTTGGGCG TTGATGGGGTTGATCAGAGCCATCGAGTCAAATAGGGCACATCTCTTCCT CTTGTTGAGACGACATATCCTGAAATGCTTCTTCGAGTTTTCCTTCTTCT AACCTTATGTTATTTTTTCAACTGCAACACTCTGCCATGGCGCACACGGC ACCGCCACGGCGCCAAACCACGGCGCACACGACCCATCATACACGTGGGC GGCAAATGTAATCGAATTAGGCTACGACGGCTCGAACCGCGTGAACGACT TTTACGAGTTTTCCATCCCGACGCGCGTGTGGACGCTCGTGCCGGCGGCT GGGCGGCCCCCGAGCCCGCGCGACCGTCACACGGGTGTCGTGCATGGCAA CTCCTTCTACGTCTTCGCGGGCTTCGACGGCACGCAGCGCGTCAACGACT TCTTTGAGTTTTCGTTCGCGACCAAGCAGTGGGCGCCCGTCCAGGCGAGC GCCGGTGTAGCGCCATCGCCGCGGCACAGCCACGCGGCGGTGGTGTACGG CAACAGCATGTTCGTCTTCGGCGGTTACGATGGGTCCTACAGGAGGTGGG TTCGCTCTCGTTCAATACAGTTGTAGGGCGGTTGTGATTTGGTTCTTGTT CTATCGTTCTATCGATCTTTTTGGGGTGAATGGCTGCTCTTTTGGCGCGG GAAAGCAGTAGGGAAAGACATCCAGAACTCGTTTCCTTGGCCTTTTGGCC TTCTGCTTCTTGCGTTATATGCTGCTGCAACCCTGTCGCCCTTTGTTTTG TTTAATGAGGCGAAAAATAGAGGTCTTGTGGGATCTTCTGCCAATGTTTG CCTGCCTTGCTTGCATAACATCCCTTAACTCGCTTTAGGATCCGCAATTC TCTTCTTCTTGCTCTTTCCGTCCCTTCACGCTGCATATCTGCCTCTCTCT CTTCGGTGACTTAACGGTGACACTGGGTCCCATCGATCTGCGCTTCGCGG TTCTCTGACACAAATCGCCCGCATTCCACGACCGCAGCGACTTCCACGAG TTTGATCTGGAGTCGCGGGTGTGGACGGCGGTGGGGGCGGCGGGGCGCGT GCCGCGTGCGCGCTATCGGGCAACGTGCGTGGTGCACGGCACATGCCTTT ACCTGTTCGGCGGCCACGATGGCACCCGGCACCTCAACGACGTCCACGTC TTCGATTTTGAACCGCGCGTCTGGGTCACTCTCAACACGGAAGGGCCCCC GCCCATCCCCAGGTCAGGAGATCGTCCGTAGAAGATTTCTGTCTTTCGTT GCGGTTGCATCTCGCTGGGTTGTTTGCTAGGACTTTGTTATTTGCGCGCG TTTTCACTTGTTTCTTAAGTTTAATGCGCTGTGGTGGCGGTGATGGCGGG GGTGGCGCCTCTTCTCTTTCTCGCACAATTTCGTTTCGGTTCCATCAGGG ACTCGCACGTGGCAGTGATCCATGGCAAGTCCATGTACGTGTTTGGCGGC TCGACGGGCAGCGCCATGAACGACTTCCACGAGCTGCGCCTCGATGTCTG CAAGTGGAGCCCCGTCCAGGCCCTGGGGCTCACGCCCAACAACCGGTTCT GCCACGTTGCCTCTGTCTACAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10595:330..2102+

>mRNA_P-wetherbeei_contig10595.1.1 ID=mRNA_P-wetherbeei_contig10595.1.1|Name=mRNA_P-wetherbeei_contig10595.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=846bp|location=Sequence derived from alignment at P-wetherbeei_contig10595:330..2102+ (Phaeothamnion wetherbeei SAG_119_79)
TCCGTCGTGTGGGGATGGTCGAAGGTCGACCCCAACTTCGATGACGGCGC
CCGTGTCGCCCCATGCCAGCGGTCGCTGCATGTTGCAGCCGTGCTCAACG
ACAGCATCTATGTTTTCGGAGGCTACGACGGCTCGAACCGCGTGAACGAC
TTTTACGAGTTTTCCATCCCGACGCGCGTGTGGACGCTCGTGCCGGCGGC
TGGGCGGCCCCCGAGCCCGCGCGACCGTCACACGGGTGTCGTGCATGGCA
ACTCCTTCTACGTCTTCGCGGGCTTCGACGGCACGCAGCGCGTCAACGAC
TTCTTTGAGTTTTCGTTCGCGACCAAGCAGTGGGCGCCCGTCCAGGCGAG
CGCCGGTGTAGCGCCATCGCCGCGGCACAGCCACGCGGCGGTGGTGTACG
GCAACAGCATGTTCGTCTTCGGCGGTTACGATGGGTCCTACAGGAGCGAC
TTCCACGAGTTTGATCTGGAGTCGCGGGTGTGGACGGCGGTGGGGGCGGC
GGGGCGCGTGCCGCGTGCGCGCTATCGGGCAACGTGCGTGGTGCACGGCA
CATGCCTTTACCTGTTCGGCGGCCACGATGGCACCCGGCACCTCAACGAC
GTCCACGTCTTCGATTTTGAACCGCGCGTCTGGGTCACTCTCAACACGGA
AGGGCCCCCGCCCATCCCCAGGGACTCGCACGTGGCAGTGATCCATGGCA
AGTCCATGTACGTGTTTGGCGGCTCGACGGGCAGCGCCATGAACGACTTC
CACGAGCTGCGCCTCGATGTCTGCAAGTGGAGCCCCGTCCAGGCCCTGGG
GCTCACGCCCAACAACCGGTTCTGCCACGTTGCCTCTGTCTACAAG
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