mRNA_P-wetherbeei_contig10590.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10590.1.1 vs. uniprot
Match: A0A836CJ23_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ23_9STRA) HSP 1 Score: 207 bits (527), Expect = 3.040e-59 Identity = 98/157 (62.42%), Postives = 116/157 (73.89%), Query Frame = 1 Query: 37 QAGDGEAVRDGEECRLCLRQAYRRKCCSEFYCSDCYFKAGVCPSCGKAVERRAQFQRVPRDPGLWPVAAGYAVSLLVVVSALAVVAVAIANDRTLPATVIGHRCYGFFTECSSEDACVAFPDSLAEGLLPPAHEWEACTLETVNKMYGSYCVYDKQV 507 +AG+ EA RDGEECR+CLRQ +RRKCC EF+CS CYF+AG CP+C +RR + R PRDPG+ PV GYAVS LV ++ALAV AV ANDRTLP TV G+RCYGFF ECS EDACV A G+ W+ CTL+TVNK+YG YCV+DKQV Sbjct: 195 EAGEAEA-RDGEECRVCLRQGFRRKCCGEFFCSACYFRAGACPACAAPAQRRVRLTRTPRDPGVAPVLLGYAVSALVCLAALAVAAVVAANDRTLPRTVSGYRCYGFFPECSGEDACVEVEGGAARGMPDALVSWKQCTLQTVNKLYGQYCVHDKQV 350
BLAST of mRNA_P-wetherbeei_contig10590.1.1 vs. uniprot
Match: A0A6H5KNS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNS6_9PHAE) HSP 1 Score: 166 bits (420), Expect = 2.490e-47 Identity = 80/151 (52.98%), Postives = 101/151 (66.89%), Query Frame = 1 Query: 58 VRDGEECRLCLRQAYRRKCCSEFYCSDCYFKAGVCPSCGKAVERRAQFQRVPRDPGLWPVAAGYAVSLLVVVSALAVVAVAIANDRTLPATVIGHRCYGFFTECSSEDACVAFPDSLAEGLLPPAHEWEACTLET-VNKMYGSYCVYDKQV 507 VRDGEECR CLRQ + RKCC EFYCS CYF+ G CPSC E+R ++QR+PRDPG+ PV G+ ++LV + LA V+VAIAN+ + TV CYGFF C+ CVA+ L P EW AC ET VNK+YGS+CV+D++V Sbjct: 99 VRDGEECRKCLRQGFARKCCGEFYCSSCYFQTGHCPSCHVPAEKRIEYQRIPRDPGVVPVLVGFFATILVCLVTLAGVSVAIANNSAVIKTVFDQTCYGFFPSCTPGAKCVAYDSGDIGNGLEPITEWSACEDETTVNKIYGSFCVFDEEV 249
BLAST of mRNA_P-wetherbeei_contig10590.1.1 vs. uniprot
Match: D7FIM3_ECTSI (Reelin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIM3_ECTSI) HSP 1 Score: 164 bits (415), Expect = 8.550e-44 Identity = 79/151 (52.32%), Postives = 101/151 (66.89%), Query Frame = 1 Query: 58 VRDGEECRLCLRQAYRRKCCSEFYCSDCYFKAGVCPSCGKAVERRAQFQRVPRDPGLWPVAAGYAVSLLVVVSALAVVAVAIANDRTLPATVIGHRCYGFFTECSSEDACVAFPDSLAEGLLPPAHEWEACTLET-VNKMYGSYCVYDKQV 507 VRDGEECR CLRQ + RKCC EFYCS CYF+ G CPSC E+R ++QR+PRDPG+ PV G+ ++LV + LA V+VAIA++ + TV CYGFF C+ CVA+ L P EW AC ET VNK+YGS+CV+D++V Sbjct: 218 VRDGEECRKCLRQGFARKCCGEFYCSSCYFQTGHCPSCHVLAEKRIEYQRIPRDPGVVPVLVGFFATVLVCLVTLAGVSVAIASNSAVIKTVFDQTCYGFFPSCTPGPKCVAYDSGDIGNGLEPITEWSACEDETTVNKIYGSFCVFDEEV 368
BLAST of mRNA_P-wetherbeei_contig10590.1.1 vs. uniprot
Match: A0A7S2BHZ7_9STRA (Reelin n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHZ7_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.650e-34 Identity = 64/149 (42.95%), Postives = 91/149 (61.07%), Query Frame = 1 Query: 55 AVRDGEECRLCLRQAYRRKCCSEFYCSDCYFKAGVCPSCGKAVERRAQFQRVPRDPGLWPVAAGYAVSLLVVVSALAVVAVAIANDRTLPATVIGHRCYGFFTECSSEDACVAFPDSLAEGLLPPAHEWEACTLETVNKMYGSYCVYDK 501 A ++ EECR CL +RRKCC E+YC+ CYF+ G CP C + R DPG WPV G+ +S+ V ++ALA+ + + +D+ P TV GHRCYG F +C + C+ + EGL+ A +W+ C + TVNK+YG C+YDK Sbjct: 78 AEQENEECRKCLEPGFRRKCCKEYYCNSCYFETGNCPGCDRLSAPRGLGLFGLDDPGAWPVIYGWCLSVFVTLAALALFVMIVVSDQLNPRTVFGHRCYGLFPQCD-QIQCIELGGPINEGLVTQA-DWKYCDMNTVNKVYGGTCLYDK 224
BLAST of mRNA_P-wetherbeei_contig10590.1.1 vs. uniprot
Match: A0A7S4DJ09_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJ09_HETAK) HSP 1 Score: 69.3 bits (168), Expect = 2.120e-11 Identity = 29/65 (44.62%), Postives = 43/65 (66.15%), Query Frame = 1 Query: 49 GEAVRDGEECRLCLRQAYRRKCCSEFYCSDCYFKAGVCPSCGKAVERR---AQFQRVPRDPGLWP 234 G+ R+GEECR+CL Q ++R CC EFYC+ CY+ G CPSC ++V+ + A + +PG+ P Sbjct: 142 GKFSREGEECRICLAQGFKRGCCGEFYCNACYYNTGYCPSCRQSVKNQPLAAGSGLLTHNPGIPP 206 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10590.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10590.1.1 >prot_P-wetherbeei_contig10590.1.1 ID=prot_P-wetherbeei_contig10590.1.1|Name=mRNA_P-wetherbeei_contig10590.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp GPGKGRWGAGSGQAGDGEAVRDGEECRLCLRQAYRRKCCSEFYCSDCYFKback to top mRNA from alignment at P-wetherbeei_contig10590:1479..1985+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10590.1.1 ID=mRNA_P-wetherbeei_contig10590.1.1|Name=mRNA_P-wetherbeei_contig10590.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig10590:1479..1985+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10590:1479..1985+ >mRNA_P-wetherbeei_contig10590.1.1 ID=mRNA_P-wetherbeei_contig10590.1.1|Name=mRNA_P-wetherbeei_contig10590.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig10590:1479..1985+ (Phaeothamnion wetherbeei SAG_119_79)back to top |