mRNA_P-wetherbeei_contig1059.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 199 bits (506), Expect = 2.370e-51 Identity = 139/435 (31.95%), Postives = 200/435 (45.98%), Query Frame = 2 Query: 611 MVSVLNKRAAMPISKMLFDYLVRFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVTS--INRAADCEPSMVAAGR-----ETKFPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFELCMSAWHPKPALDLVTIDGFVMPTAN----EVCRHAMLILEPFMEVSILFFPRDVAGYDLVVMNSSA*RAPQRSFPLWRMSPISVFLRPCLSSRSRRRVRAAPTSPAAW*SR*HTASVYIHHTKTFLAAAMQNGANSAVPGAM---LPVCREMLQVFNDKWGDGTNICTYGEGPRRQTKGFTKVQVLATAFDPRTRSLVGVPSHEKEVVCALVMREVVELMVAEHTASVA 1873 MVS LNKRA +P + L + K +L ++A M + A+T DGWTSR + Y SLT+ +I+ +W+L L+LDC KH G+T DL +V +VER +T I DCEPSM+ AGR + H GC H +ES T F+ + G + + L ++ KS+Q+ +L CG+ +E + QDVETRW ST+ + + + A+ L V P + EV R IL PFM+ +D+ G V S + +M+ + R + AA T L A Q G AM P ++ F ++WGDG+NI Y EG RRQ +GF + QV ATA DPR + L G+ E V V V++ + +H A Sbjct: 1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSL-GALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQ-----KDLEGAQYVT----------GSMTIGKMAEL------------REGLEAAITD---------------------LKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKA 386
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 147 bits (371), Expect = 5.570e-34 Identity = 116/429 (27.04%), Postives = 182/429 (42.42%), Query Frame = 2 Query: 584 IVSPPGFKTMVSVLNKRAAMPISKMLFDYLVRFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVTS--INRAADCEPSMVAAGRETK----FPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STF-ELCMSAWHPKPALDLVTIDGFVMPTANEVCRHAMLILEPFMEVSILFFPRDVAGYDLVVMNSSA*RAPQRSFPLWRMSPISVFLRPCLSSRSRRRVRAAPTSPAAW*SR*HTASVYIHHTKTFLAAAMQNGANSAVPGAMLPVCREMLQVFNDKWGDGTNICTYGEGPRRQTKGFTKVQVLATAFDPRTRSLVGVPSHEKEVVCALVMREVVELMV 1849 +V F MV L RA +P ++ + L K L ++ + AVT DGWTS + D Y T +I+ ++L +L ++C KH G T DLV V+ ++ R +TS + DCEPSMV AGR + H GC H LES+T F GV+ + + + ++++ S+Q +++L+ + +E KK+ QDVETRW ST+ +C +P + ID + P E + ++EP + IL A D+ V S+ + YI + L A++ A P + + F K T++ + +GF K QVLATA DPR++SL G+ E V V E V++ + Sbjct: 1 MVENEHFIEMVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDS-IPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTV---------------------SLVI------------------------------PYIADLRDELDEAVERLQAHACPAESIVAEAKKDVFFAPKHVRPTSVIV-------EPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAI 370
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 133 bits (335), Expect = 5.160e-30 Identity = 103/371 (27.76%), Postives = 157/371 (42.32%), Query Frame = 2 Query: 758 SRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVT--SINRAADCEPSMVAAGRETK----FPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFELCMSAWHPKPALDLVTIDGFVMPTANEVCRHAMLILEPFMEVSILFFPRDVAGYDLVVMNSSA*RAPQRSFPLWRMSPISVFLRPCLSSRSRRRVRAAPTSPAAW*SR*HTASVYIHHTKTFLAAAMQNGANSAVPGAMLPVCREMLQV-FNDKWGDGTNICTYGEGPRRQTKGFTKVQVLATAFDPRTRSLVGVPSHEKEVVCALVMREVVELMV 1849 S + D Y + T +I+ ++L +L L+ KH G T DLV V+ ++ R +T ++ DCEP MV AGR + H GC H ES+T F GV+ + + + +++ S+Q + +L+ C + +E KK+ QDVETRW W +D + P NE + ++EP + M + + + ++ LR L R A + PA S+ K L C LQ + +W DGT++ Y EGPRRQ +GF K QVLATA DPR++SL G+ E V V E V++ + Sbjct: 3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRW----------WSTPREIDSIP------PLLNEKDWEVLQLVEPLLHP---------------FMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQ--AYSCPAE--------SIVAEAKKDILR------------------CAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAI 314
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: A0A3P8QHX8_ASTCA (BED-type domain-containing protein n=2 Tax=Astatotilapia calliptera TaxID=8154 RepID=A0A3P8QHX8_ASTCA) HSP 1 Score: 114 bits (286), Expect = 1.120e-22 Identity = 71/255 (27.84%), Postives = 122/255 (47.84%), Query Frame = 2 Query: 539 EELCRFVAVQYQPLSIVSPPGFKTMVSVLNKRAAMPISKMLFDYLV--RFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVTSINRA--ADCEPSMVAAGRETKFPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFELCMSAWHPKPALDLVTIDGFVMPTANEVC 1291 + + F+ +P S+V GF+ +++ L R +P K L + ++ ++ H A++ ++ A+T D WTSRA D Y ++T H I+++W+L S L S A++L I+ +E ++T+ N D +MV A T + H GC AH L + VA ++ + +AS FH+S + KLK + ++ KL D TRW ST E+ +PA+ + V + +C Sbjct: 97 QSVATFICKDIRPYSVVENDGFQNLINTLEPRYVLPTRKHLSEVVIPNMYEKVKHDVTASLKSAERVAITCDSWTSRATDNYLTITSHHIDQEWKLVSHVLQTRTTEASHTAANLSEIMFKAIEEWELTNKNPVIVTDNAANMVRAVEITGWLHIGCFAHTLNLASQAGLKVPAVAQLLGRVRRIASFFHRSTVASRKLKEKQKILNLPAHKLVNDGVTRWNSTLEMLERFLEQQPAISAALLSPEVRRNDSNLC 351
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: A0A3P8QZG9_ASTCA (BED-type domain-containing protein n=1 Tax=Astatotilapia calliptera TaxID=8154 RepID=A0A3P8QZG9_ASTCA) HSP 1 Score: 114 bits (284), Expect = 1.750e-22 Identity = 71/255 (27.84%), Postives = 121/255 (47.45%), Query Frame = 2 Query: 539 EELCRFVAVQYQPLSIVSPPGFKTMVSVLNKRAAMPISKMLFDYLV--RFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVTSINRA--ADCEPSMVAAGRETKFPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFELCMSAWHPKPALDLVTIDGFVMPTANEVC 1291 + + F+ +P S+V GF+ +++ L R +P K L + ++ ++ H A++ ++ A+T D WTSRA D Y ++T H I+++W L S L S A++L I+ +E ++T+ N D +MV A T + H GC AH L + VA ++ + +AS FH+S + KLK + ++ KL D TRW ST E+ +PA+ + V + +C Sbjct: 109 QSVATFICKDIRPYSVVENDGFQNLINTLEPRYVLPSRKHLSEVVIPNMYEKVKHDVTASLKSAERVAITCDSWTSRATDNYLTITSHHIDQEWRLVSHVLQTRTTEASHTAANLSEIMFKAIEEWELTNKNPVIVTDNAANMVRAVEITGWLHIGCFAHTLNLASQAGLKVPAVAQLLGRVRRIASFFHRSTVASRKLKEKQKILNLPAHKLVNDGVTRWNSTLEMLERFLEQQPAISAALLSPEVRRNDSNLC 363
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: A0A3P8PZW8_ASTCA (BED-type domain-containing protein n=1 Tax=Astatotilapia calliptera TaxID=8154 RepID=A0A3P8PZW8_ASTCA) HSP 1 Score: 114 bits (285), Expect = 1.760e-22 Identity = 74/266 (27.82%), Postives = 125/266 (46.99%), Query Frame = 2 Query: 506 ASFEVSAPPWIEELCRFVAVQYQPLSIVSPPGFKTMVSVLNKRAAMPISKMLFDYLV--RFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVTSINRA--ADCEPSMVAAGRETKFPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFELCMSAWHPKPALDLVTIDGFVMPTANEVC 1291 AS A + + F+ +P S+V GF+ +++ L R +P K L + ++ ++ H A++ ++ A+T D WTSRA D Y ++T H I+++W L S L S A++L I+ +E ++T+ N D +MV A T + H GC AH L + VA ++ + +AS FH+S + KLK + ++ KL D TRW ST E+ +PA+ + V + + +C Sbjct: 96 ASTSPRAQKITQSVATFICKDIRPYSVVENDGFQNLINTLEPRYVLPSRKHLSEVVIPNMYEKVKHDVTASLKSAERVAITCDSWTSRATDNYLTITSHHIDQEWRLVSHVLQTRTTEASHTAANLSEIMFKAIEEWELTNKNPVIVTDNAANMVRAVEITGWLHIGCFAHTLNLASQAGLKVPAVAQLLGRVRRIASFFHRSTVASRKLKEKQKILNLPAHKLVTDGVTRWNSTLEMLEPFLEQQPAISAALLSPEVRRSDSNLC 361
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: A0A669FA86_ORENI (BED-type domain-containing protein n=3 Tax=Pseudocrenilabrinae TaxID=318546 RepID=A0A669FA86_ORENI) HSP 1 Score: 112 bits (280), Expect = 2.470e-22 Identity = 74/266 (27.82%), Postives = 123/266 (46.24%), Query Frame = 2 Query: 506 ASFEVSAPPWIEELCRFVAVQYQPLSIVSPPGFKTMVSVLNKRAAMPISKMLFDYLV--RFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVTSINRA--ADCEPSMVAAGRETKFPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFELCMSAWHPKPALDLVTIDGFVMPTANEVC 1291 AS A + + F+ P S+V GF+ +++ L R +P K L + ++ ++ H A++ ++ A+T D WTSRA D Y ++T H I+++W L S L S A +L I+ +E +VT+ N D +MV A T + H GC AH L + VA ++ + +AS FH+S + K K + ++ KL D TRW ST E+ +PA+ + V + +++C Sbjct: 86 ASTSPRAQKITQSVATFICKDICPYSVVENDGFQNLINTLEPRYVLPTRKHLSEVVIPNMYEKVKHDVTASLKSAERVAITCDSWTSRATDNYLTITWHHIDQEWRLVSHVLQTRTTEASHTAVNLSEIMFKAIEEWEVTNKNPVIVTDNAANMVRAVEITGWLHIGCFAHTLNLASQAGLKVPAVAQLLGRVRRIASFFHRSTVASRKFKEKQKILNLPAHKLVTDGVTRWNSTLEMLERFLEQQPAISAALLSPEVRRSDSDLC 351
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: A0A3P9D101_9CICH (BED-type domain-containing protein n=10 Tax=Pseudocrenilabrinae TaxID=318546 RepID=A0A3P9D101_9CICH) HSP 1 Score: 113 bits (282), Expect = 3.150e-22 Identity = 75/271 (27.68%), Postives = 126/271 (46.49%), Query Frame = 2 Query: 491 HADTRASFEVSAPPWIEELCRFVAVQYQPLSIVSPPGFKTMVSVLNKRAAMPISKMLFDYLV--RFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVTSINRA--ADCEPSMVAAGRETKFPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFELCMSAWHPKPALDLVTIDGFVMPTANEVC 1291 H D + W LC+ + +P S+V GF+ +++ L R +P K L + ++ ++ H A++ ++ A+T D WTSRA D Y ++T H I+++W L S L S A++L I+ +E ++T+ N D +MV A T + H GC AH L + VA ++ + +AS FH+S + KLK + ++ KL D TRW ST E+ +PA+ + V + + +C Sbjct: 61 HPDIPLAKTADTNLWQLSLCKDI----RPYSVVENDGFQNLINTLEPRYVLPSRKHLSEVVIPNMYEKVKHDVTASLKSAERVAITCDSWTSRATDNYLTITSHHIDQEWRLVSHVLQTRTTEASHTAANLSEIMFKAIEEWELTNKNPVIVTDNAANMVRAVEITGWLHIGCFAHTLNLASQAGLKVPAVAQLLGRVRRIASFFHRSTVASRKLKEKQKILNLPAHKLVTDGVTRWNSTLEMLERFLEQQPAISAALLSPEVRRSDSNLC 327
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: A0A3P8QXP5_ASTCA (BED-type domain-containing protein n=3 Tax=Astatotilapia calliptera TaxID=8154 RepID=A0A3P8QXP5_ASTCA) HSP 1 Score: 112 bits (280), Expect = 5.420e-22 Identity = 71/255 (27.84%), Postives = 121/255 (47.45%), Query Frame = 2 Query: 539 EELCRFVAVQYQPLSIVSPPGFKTMVSVLNKRAAMPISKMLFDYLV--RFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVTSINRA--ADCEPSMVAAGRETKFPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFELCMSAWHPKPALDLVTIDGFVMPTANEVC 1291 + + F+ +P S+V GF+ +++ L R +P K L + ++ ++ H A++ ++ A+T D WTSRA D Y ++T H I+++W L S L S A++L I+ +E ++T+ N D +MV A T + H GC AH L + VA ++ + +AS FH+S + KLK + ++ KL D TRW ST E+ +PA+ + V + +C Sbjct: 97 QSVATFICKDIRPYSVVENDGFQNLINTLEPRYVLPSRKHLSEVVIPNMYEKVKHDVTASLKSAERVAITCDSWTSRATDNYLTITSHHIDQEWRLVSHVLQTRTTEASHTAANLSEIMFKAIEEWELTNKNPVIVTDNAANMVRAVEITGWLHIGCFAHTLNLASQAGLKVPAVAQLLGRVRRIASFFHRSTVASCKLKEKQKILNLPAHKLVNDGVTRWNSTLEMLERFLEQQPAISAALLSPEVRRNDSNLC 351
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: UPI00177D4E93 (zinc finger BED domain-containing protein 6-like n=1 Tax=Rhagoletis pomonella TaxID=28610 RepID=UPI00177D4E93) HSP 1 Score: 109 bits (273), Expect = 2.170e-21 Identity = 78/231 (33.77%), Postives = 113/231 (48.92%), Query Frame = 2 Query: 542 ELCRFVAVQYQPLSIVSPPGFKTMVSVLNKRAAMPISKMLFDYLV--RFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALD---CV----KHVGSTCASDLVRIVEDLVERAKVTSINRAADCEPSMVAAGRETKFPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFEL 1207 +L + V +YQPL IV P FK +++LN +P K L L+ +K +L ++K +TVDGWTSRA D +FS+T H+I+E E T LA D CV +H G + L I ++ K+ I D +M AA R+ + H GC AH L + + + ++ K++ F KS+ KLK I KL DV TRW ST+E+ Sbjct: 118 QLVKMVVKEYQPLCIVEDPEFKRFINMLNPNYKLPTRKTLSTSLIPAAYKETLEAVKNRLSKAFAICLTVDGWTSRAHDSFFSVTAHYISESSERTFLASDLITCVSYADRHTGENIKNKLREICDECGIANKIAVI--VTDNAANMKAAVRDGGWRHWGCFAHTLNLIAQA--GLTEIQAVLDKVKSIVRFFKKSSYAYAKLKNTSESMQIPMLKLINDVVTRWNSTYEM 344 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1059.1.1 >prot_P-wetherbeei_contig1059.1.1 ID=prot_P-wetherbeei_contig1059.1.1|Name=mRNA_P-wetherbeei_contig1059.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=313bp MLGRGWSTYRRGKLKGTVICENCDTRQSGGQLRLVEVDGQGEAALQNASQback to top mRNA from alignment at P-wetherbeei_contig1059:559..3261- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1059.1.1 ID=mRNA_P-wetherbeei_contig1059.1.1|Name=mRNA_P-wetherbeei_contig1059.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2703bp|location=Sequence derived from alignment at P-wetherbeei_contig1059:559..3261- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1059:559..3261- >mRNA_P-wetherbeei_contig1059.1.1 ID=mRNA_P-wetherbeei_contig1059.1.1|Name=mRNA_P-wetherbeei_contig1059.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=939bp|location=Sequence derived from alignment at P-wetherbeei_contig1059:559..3261- (Phaeothamnion wetherbeei SAG_119_79)back to top |