mRNA_P-wetherbeei_contig1059.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1059.1.1
Unique NamemRNA_P-wetherbeei_contig1059.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 2.370e-51
Identity = 139/435 (31.95%), Postives = 200/435 (45.98%), Query Frame = 2
Query:  611 MVSVLNKRAAMPISKMLFDYLVRFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVTS--INRAADCEPSMVAAGR-----ETKFPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFELCMSAWHPKPALDLVTIDGFVMPTAN----EVCRHAMLILEPFMEVSILFFPRDVAGYDLVVMNSSA*RAPQRSFPLWRMSPISVFLRPCLSSRSRRRVRAAPTSPAAW*SR*HTASVYIHHTKTFLAAAMQNGANSAVPGAM---LPVCREMLQVFNDKWGDGTNICTYGEGPRRQTKGFTKVQVLATAFDPRTRSLVGVPSHEKEVVCALVMREVVELMVAEHTASVA 1873
            MVS LNKRA +P  + L   +   K +L  ++A M   +  A+T DGWTSR  + Y SLT+ +I+ +W+L  L+LDC KH G+T   DL  +V  +VER  +T   I    DCEPSM+ AGR      +   H GC  H +ES T   F+   + G +   + L  ++ KS+Q+  +L   CG+  +E   + QDVETRW ST+ + +   +   A+ L      V P  +    EV R    IL PFM+       +D+ G   V            S  + +M+ +            R  + AA T                      L A  Q G       AM    P    ++  F ++WGDG+NI  Y EG RRQ +GF + QV ATA DPR + L G+   E   V   V    V++ + +H    A
Sbjct:    1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSL-GALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQ-----KDLEGAQYVT----------GSMTIGKMAEL------------REGLEAAITD---------------------LKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKA 386          
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 5.570e-34
Identity = 116/429 (27.04%), Postives = 182/429 (42.42%), Query Frame = 2
Query:  584 IVSPPGFKTMVSVLNKRAAMPISKMLFDYLVRFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVTS--INRAADCEPSMVAAGRETK----FPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STF-ELCMSAWHPKPALDLVTIDGFVMPTANEVCRHAMLILEPFMEVSILFFPRDVAGYDLVVMNSSA*RAPQRSFPLWRMSPISVFLRPCLSSRSRRRVRAAPTSPAAW*SR*HTASVYIHHTKTFLAAAMQNGANSAVPGAMLPVCREMLQVFNDKWGDGTNICTYGEGPRRQTKGFTKVQVLATAFDPRTRSLVGVPSHEKEVVCALVMREVVELMV 1849
            +V    F  MV  L  RA +P  ++  + L   K  L  ++      +  AVT DGWTS + D Y   T  +I+  ++L +L ++C KH G T   DLV  V+ ++ R  +TS  +    DCEPSMV AGR  +      H GC  H LES+T   F   GV+  +   + + ++++ S+Q +++L+    +  +E KK+ QDVETRW ST+  +C      +P  +   ID  + P   E     + ++EP  +  IL      A  D+ V                     S+ +                               YI   +  L  A++     A P   +    +    F  K    T++         + +GF K QVLATA DPR++SL G+   E   V   V  E V++ +
Sbjct:    1 MVENEHFIEMVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDS-IPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTV---------------------SLVI------------------------------PYIADLRDELDEAVERLQAHACPAESIVAEAKKDVFFAPKHVRPTSVIV-------EPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAI 370          
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 5.160e-30
Identity = 103/371 (27.76%), Postives = 157/371 (42.32%), Query Frame = 2
Query:  758 SRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVT--SINRAADCEPSMVAAGRETK----FPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFELCMSAWHPKPALDLVTIDGFVMPTANEVCRHAMLILEPFMEVSILFFPRDVAGYDLVVMNSSA*RAPQRSFPLWRMSPISVFLRPCLSSRSRRRVRAAPTSPAAW*SR*HTASVYIHHTKTFLAAAMQNGANSAVPGAMLPVCREMLQV-FNDKWGDGTNICTYGEGPRRQTKGFTKVQVLATAFDPRTRSLVGVPSHEKEVVCALVMREVVELMV 1849
            S + D Y + T  +I+  ++L +L L+  KH G T   DLV  V+ ++ R  +T  ++    DCEP MV AGR  +      H GC  H  ES+T   F   GV+  +   + + +++  S+Q + +L+  C +  +E KK+ QDVETRW          W     +D +       P  NE     + ++EP +                  M +       +   +  ++     LR  L     R    A + PA         S+     K  L                   C   LQ   + +W DGT++  Y EGPRRQ +GF K QVLATA DPR++SL G+   E   V   V  E V++ +
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRW----------WSTPREIDSIP------PLLNEKDWEVLQLVEPLLHP---------------FMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQ--AYSCPAE--------SIVAEAKKDILR------------------CAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAI 314          
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: A0A3P8QHX8_ASTCA (BED-type domain-containing protein n=2 Tax=Astatotilapia calliptera TaxID=8154 RepID=A0A3P8QHX8_ASTCA)

HSP 1 Score: 114 bits (286), Expect = 1.120e-22
Identity = 71/255 (27.84%), Postives = 122/255 (47.84%), Query Frame = 2
Query:  539 EELCRFVAVQYQPLSIVSPPGFKTMVSVLNKRAAMPISKMLFDYLV--RFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVTSINRA--ADCEPSMVAAGRETKFPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFELCMSAWHPKPALDLVTIDGFVMPTANEVC 1291
            + +  F+    +P S+V   GF+ +++ L  R  +P  K L + ++   ++   H   A++   ++ A+T D WTSRA D Y ++T H I+++W+L S  L       S  A++L  I+   +E  ++T+ N     D   +MV A   T + H GC AH L   +        VA ++   + +AS FH+S   + KLK    + ++   KL  D  TRW ST E+       +PA+    +   V    + +C
Sbjct:   97 QSVATFICKDIRPYSVVENDGFQNLINTLEPRYVLPTRKHLSEVVIPNMYEKVKHDVTASLKSAERVAITCDSWTSRATDNYLTITSHHIDQEWKLVSHVLQTRTTEASHTAANLSEIMFKAIEEWELTNKNPVIVTDNAANMVRAVEITGWLHIGCFAHTLNLASQAGLKVPAVAQLLGRVRRIASFFHRSTVASRKLKEKQKILNLPAHKLVNDGVTRWNSTLEMLERFLEQQPAISAALLSPEVRRNDSNLC 351          
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: A0A3P8QZG9_ASTCA (BED-type domain-containing protein n=1 Tax=Astatotilapia calliptera TaxID=8154 RepID=A0A3P8QZG9_ASTCA)

HSP 1 Score: 114 bits (284), Expect = 1.750e-22
Identity = 71/255 (27.84%), Postives = 121/255 (47.45%), Query Frame = 2
Query:  539 EELCRFVAVQYQPLSIVSPPGFKTMVSVLNKRAAMPISKMLFDYLV--RFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVTSINRA--ADCEPSMVAAGRETKFPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFELCMSAWHPKPALDLVTIDGFVMPTANEVC 1291
            + +  F+    +P S+V   GF+ +++ L  R  +P  K L + ++   ++   H   A++   ++ A+T D WTSRA D Y ++T H I+++W L S  L       S  A++L  I+   +E  ++T+ N     D   +MV A   T + H GC AH L   +        VA ++   + +AS FH+S   + KLK    + ++   KL  D  TRW ST E+       +PA+    +   V    + +C
Sbjct:  109 QSVATFICKDIRPYSVVENDGFQNLINTLEPRYVLPSRKHLSEVVIPNMYEKVKHDVTASLKSAERVAITCDSWTSRATDNYLTITSHHIDQEWRLVSHVLQTRTTEASHTAANLSEIMFKAIEEWELTNKNPVIVTDNAANMVRAVEITGWLHIGCFAHTLNLASQAGLKVPAVAQLLGRVRRIASFFHRSTVASRKLKEKQKILNLPAHKLVNDGVTRWNSTLEMLERFLEQQPAISAALLSPEVRRNDSNLC 363          
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: A0A3P8PZW8_ASTCA (BED-type domain-containing protein n=1 Tax=Astatotilapia calliptera TaxID=8154 RepID=A0A3P8PZW8_ASTCA)

HSP 1 Score: 114 bits (285), Expect = 1.760e-22
Identity = 74/266 (27.82%), Postives = 125/266 (46.99%), Query Frame = 2
Query:  506 ASFEVSAPPWIEELCRFVAVQYQPLSIVSPPGFKTMVSVLNKRAAMPISKMLFDYLV--RFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVTSINRA--ADCEPSMVAAGRETKFPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFELCMSAWHPKPALDLVTIDGFVMPTANEVC 1291
            AS    A    + +  F+    +P S+V   GF+ +++ L  R  +P  K L + ++   ++   H   A++   ++ A+T D WTSRA D Y ++T H I+++W L S  L       S  A++L  I+   +E  ++T+ N     D   +MV A   T + H GC AH L   +        VA ++   + +AS FH+S   + KLK    + ++   KL  D  TRW ST E+       +PA+    +   V  + + +C
Sbjct:   96 ASTSPRAQKITQSVATFICKDIRPYSVVENDGFQNLINTLEPRYVLPSRKHLSEVVIPNMYEKVKHDVTASLKSAERVAITCDSWTSRATDNYLTITSHHIDQEWRLVSHVLQTRTTEASHTAANLSEIMFKAIEEWELTNKNPVIVTDNAANMVRAVEITGWLHIGCFAHTLNLASQAGLKVPAVAQLLGRVRRIASFFHRSTVASRKLKEKQKILNLPAHKLVTDGVTRWNSTLEMLEPFLEQQPAISAALLSPEVRRSDSNLC 361          
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: A0A669FA86_ORENI (BED-type domain-containing protein n=3 Tax=Pseudocrenilabrinae TaxID=318546 RepID=A0A669FA86_ORENI)

HSP 1 Score: 112 bits (280), Expect = 2.470e-22
Identity = 74/266 (27.82%), Postives = 123/266 (46.24%), Query Frame = 2
Query:  506 ASFEVSAPPWIEELCRFVAVQYQPLSIVSPPGFKTMVSVLNKRAAMPISKMLFDYLV--RFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVTSINRA--ADCEPSMVAAGRETKFPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFELCMSAWHPKPALDLVTIDGFVMPTANEVC 1291
            AS    A    + +  F+     P S+V   GF+ +++ L  R  +P  K L + ++   ++   H   A++   ++ A+T D WTSRA D Y ++T H I+++W L S  L       S  A +L  I+   +E  +VT+ N     D   +MV A   T + H GC AH L   +        VA ++   + +AS FH+S   + K K    + ++   KL  D  TRW ST E+       +PA+    +   V  + +++C
Sbjct:   86 ASTSPRAQKITQSVATFICKDICPYSVVENDGFQNLINTLEPRYVLPTRKHLSEVVIPNMYEKVKHDVTASLKSAERVAITCDSWTSRATDNYLTITWHHIDQEWRLVSHVLQTRTTEASHTAVNLSEIMFKAIEEWEVTNKNPVIVTDNAANMVRAVEITGWLHIGCFAHTLNLASQAGLKVPAVAQLLGRVRRIASFFHRSTVASRKFKEKQKILNLPAHKLVTDGVTRWNSTLEMLERFLEQQPAISAALLSPEVRRSDSDLC 351          
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: A0A3P9D101_9CICH (BED-type domain-containing protein n=10 Tax=Pseudocrenilabrinae TaxID=318546 RepID=A0A3P9D101_9CICH)

HSP 1 Score: 113 bits (282), Expect = 3.150e-22
Identity = 75/271 (27.68%), Postives = 126/271 (46.49%), Query Frame = 2
Query:  491 HADTRASFEVSAPPWIEELCRFVAVQYQPLSIVSPPGFKTMVSVLNKRAAMPISKMLFDYLV--RFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVTSINRA--ADCEPSMVAAGRETKFPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFELCMSAWHPKPALDLVTIDGFVMPTANEVC 1291
            H D   +       W   LC+ +    +P S+V   GF+ +++ L  R  +P  K L + ++   ++   H   A++   ++ A+T D WTSRA D Y ++T H I+++W L S  L       S  A++L  I+   +E  ++T+ N     D   +MV A   T + H GC AH L   +        VA ++   + +AS FH+S   + KLK    + ++   KL  D  TRW ST E+       +PA+    +   V  + + +C
Sbjct:   61 HPDIPLAKTADTNLWQLSLCKDI----RPYSVVENDGFQNLINTLEPRYVLPSRKHLSEVVIPNMYEKVKHDVTASLKSAERVAITCDSWTSRATDNYLTITSHHIDQEWRLVSHVLQTRTTEASHTAANLSEIMFKAIEEWELTNKNPVIVTDNAANMVRAVEITGWLHIGCFAHTLNLASQAGLKVPAVAQLLGRVRRIASFFHRSTVASRKLKEKQKILNLPAHKLVTDGVTRWNSTLEMLERFLEQQPAISAALLSPEVRRSDSNLC 327          
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: A0A3P8QXP5_ASTCA (BED-type domain-containing protein n=3 Tax=Astatotilapia calliptera TaxID=8154 RepID=A0A3P8QXP5_ASTCA)

HSP 1 Score: 112 bits (280), Expect = 5.420e-22
Identity = 71/255 (27.84%), Postives = 121/255 (47.45%), Query Frame = 2
Query:  539 EELCRFVAVQYQPLSIVSPPGFKTMVSVLNKRAAMPISKMLFDYLV--RFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERAKVTSINRA--ADCEPSMVAAGRETKFPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFELCMSAWHPKPALDLVTIDGFVMPTANEVC 1291
            + +  F+    +P S+V   GF+ +++ L  R  +P  K L + ++   ++   H   A++   ++ A+T D WTSRA D Y ++T H I+++W L S  L       S  A++L  I+   +E  ++T+ N     D   +MV A   T + H GC AH L   +        VA ++   + +AS FH+S   + KLK    + ++   KL  D  TRW ST E+       +PA+    +   V    + +C
Sbjct:   97 QSVATFICKDIRPYSVVENDGFQNLINTLEPRYVLPSRKHLSEVVIPNMYEKVKHDVTASLKSAERVAITCDSWTSRATDNYLTITSHHIDQEWRLVSHVLQTRTTEASHTAANLSEIMFKAIEEWELTNKNPVIVTDNAANMVRAVEITGWLHIGCFAHTLNLASQAGLKVPAVAQLLGRVRRIASFFHRSTVASCKLKEKQKILNLPAHKLVNDGVTRWNSTLEMLERFLEQQPAISAALLSPEVRRNDSNLC 351          
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Match: UPI00177D4E93 (zinc finger BED domain-containing protein 6-like n=1 Tax=Rhagoletis pomonella TaxID=28610 RepID=UPI00177D4E93)

HSP 1 Score: 109 bits (273), Expect = 2.170e-21
Identity = 78/231 (33.77%), Postives = 113/231 (48.92%), Query Frame = 2
Query:  542 ELCRFVAVQYQPLSIVSPPGFKTMVSVLNKRAAMPISKMLFDYLV--RFKLSLHGDIAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALD---CV----KHVGSTCASDLVRIVEDLVERAKVTSINRAADCEPSMVAAGRETKFPHSGCLAHCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIEYKKLTQDVETRW*STFEL 1207
            +L + V  +YQPL IV  P FK  +++LN    +P  K L   L+   +K +L      ++K     +TVDGWTSRA D +FS+T H+I+E  E T LA D   CV    +H G    + L  I ++     K+  I    D   +M AA R+  + H GC AH L  +       + +  ++   K++   F KS+    KLK       I   KL  DV TRW ST+E+
Sbjct:  118 QLVKMVVKEYQPLCIVEDPEFKRFINMLNPNYKLPTRKTLSTSLIPAAYKETLEAVKNRLSKAFAICLTVDGWTSRAHDSFFSVTAHYISESSERTFLASDLITCVSYADRHTGENIKNKLREICDECGIANKIAVI--VTDNAANMKAAVRDGGWRHWGCFAHTLNLIAQA--GLTEIQAVLDKVKSIVRFFKKSSYAYAKLKNTSESMQIPMLKLINDVVTRWNSTYEM 344          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1059.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCS5_ECTSI2.370e-5131.95Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5JJV8_9PHAE5.570e-3427.04Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KVI1_9PHAE5.160e-3027.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3P8QHX8_ASTCA1.120e-2227.84BED-type domain-containing protein n=2 Tax=Astatot... [more]
A0A3P8QZG9_ASTCA1.750e-2227.84BED-type domain-containing protein n=1 Tax=Astatot... [more]
A0A3P8PZW8_ASTCA1.760e-2227.82BED-type domain-containing protein n=1 Tax=Astatot... [more]
A0A669FA86_ORENI2.470e-2227.82BED-type domain-containing protein n=3 Tax=Pseudoc... [more]
A0A3P9D101_9CICH3.150e-2227.68BED-type domain-containing protein n=10 Tax=Pseudo... [more]
A0A3P8QXP5_ASTCA5.420e-2227.84BED-type domain-containing protein n=3 Tax=Astatot... [more]
UPI00177D4E932.170e-2133.77zinc finger BED domain-containing protein 6-like n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1059contigP-wetherbeei_contig1059:559..3261 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LCS5
PFAMsDUF659,Dimer_Tnp_hAT,zf-BED
Model size2482
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue6.48e-36
EggNOG OGsKOG1121@1|root,KOG1121@2759|Eukaryota
Descriptionprotein dimerization activity
Cds size939
COG categoryE
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185876.1427093-UTR-P-wetherbeei_contig1059:558..18481683185876.1427093-UTR-P-wetherbeei_contig1059:558..1848Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1059 559..1848 -
1683185876.1719599-UTR-P-wetherbeei_contig1059:3008..32611683185876.1719599-UTR-P-wetherbeei_contig1059:3008..3261Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1059 3009..3261 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185876.152638-CDS-P-wetherbeei_contig1059:1848..19941683185876.152638-CDS-P-wetherbeei_contig1059:1848..1994Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1059 1849..1994 -
1683185876.1613865-CDS-P-wetherbeei_contig1059:2215..30081683185876.1613865-CDS-P-wetherbeei_contig1059:2215..3008Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1059 2216..3008 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1059.1.1prot_P-wetherbeei_contig1059.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1059 1849..3008 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1059.1.1

>prot_P-wetherbeei_contig1059.1.1 ID=prot_P-wetherbeei_contig1059.1.1|Name=mRNA_P-wetherbeei_contig1059.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=313bp
MLGRGWSTYRRGKLKGTVICENCDTRQSGGQLRLVEVDGQGEAALQNASQ
RSLCYVALRRTTRSTTSQQQAASKRQKTEHADTRASFEVSAPPWIEELCR
FVAVQYQPLSIVSPPGFKTMVSVLNKRAAMPISKMLFDYLVRFKLSLHGD
IAAMTKDQKEAVTVDGWTSRAGDQYFSLTLHFINEQWELTSLALDCVKHV
GSTCASDLVRIVEDLVERAKVTSINRAADCEPSMVAAGRETKFPHSGCLA
HCLESVTGIFFDASGVAGIMKTFKALASKFHKSAQLTEKLKMACGVPSIE
YKKLTQDVETRW*
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mRNA from alignment at P-wetherbeei_contig1059:559..3261-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1059.1.1 ID=mRNA_P-wetherbeei_contig1059.1.1|Name=mRNA_P-wetherbeei_contig1059.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2703bp|location=Sequence derived from alignment at P-wetherbeei_contig1059:559..3261- (Phaeothamnion wetherbeei SAG_119_79)
CGAAGCCGAATTCCTGACACCCCCGCTTTCCCGGCTATTTTTTAAAAATC ATCCCAGGGCACGGGGATGGACACTAGATTACGTGGCGGACGCAGATGAG GGCCTCCAGCCCAATGAAAACGCCATTATCGATGTCGAAGCCGTCAATCC CCTCCCAGAGCCACCGCCTCTGCCGCTCCTCACTTTCGTGACCTCGACAC AACGGATTCCGCGGTGGAAACGGACGCGCCACACCTCCACATCAGTATGG TGCATGCTGGGGCGTGGGTGGTCAACGTACCGCCGCGGGAAGCTGAAGGG AACGGTCATTTGCGAAAACTGTGATACTCGACAAAGCGGAGGTCAATTAC GGCTCGTCGAAGTCGACGGACAAGGTGAAGCAGCATTACAAAATGCATCA CAAAGAAGCTTGTGTTACGTGGCGCTGCGGAGGACGACAAGGAGCACGAC AAGTCAGCAACAGGCGGCTTCGAAGAGGCAGAAAACCGAGCACGCCGACA CTCGGGCCTCCTTTGAAGTCAGCGCGCCGCCGTGGATCGAAGAGCTTTGT CGTTTCGTGGCCGTGCAATATCAACCGCTCTCCATCGTCTCACCCCCCGG GTTCAAAACTATGGTCAGTGTGCTCAACAAGCGGGCAGCCATGCCCATCT CCAAGATGCTCTTCGACTACCTCGTGCGCTTCAAGCTGTCGCTGCACGGC GACATCGCAGCTATGACGAAGGACCAGAAAGAGGCGGTGACAGTGGATGG CTGGACGTCGCGGGCAGGCGACCAGTACTTCTCCCTGACGCTCCACTTCA TCAATGAGCAGTGGGAGCTCACGTCGCTGGCGCTGGACTGCGTGAAACAC GTCGGGAGCACGTGCGCGTCGGATCTTGTGCGCATCGTTGAAGATCTGGT GGAGAGGGCCAAGGTCACTTCCATCAACCGCGCCGCTGACTGCGAGCCGT CTATGGTGGCAGCCGGCCGTGAAACCAAGTTCCCGCATAGCGGCTGCTTG GCGCACTGTCTAGAGAGCGTCACGGGCATCTTCTTCGACGCTTCCGGTGA GGCAGGCGACGTTTCTGTTGCTAAGCTCTTAAGCGTTTTCCGTTTTCGAG TTTCCTTCTTCCAGAATGTATCCACAACTTTTCTGCGTTTTATCAAATCT GTTGCCTCACCTGCTTTTGCTTAGACGCCGTCCGGTTGCCGGGCGGCGGC TGCGCGCCTTTTGCAGTTCTTCAACGCATGAATCTTCTCCTTAATATTCC TGTCTGCCGCTGTCCAGGTGTGGCAGGCATCATGAAGACCTTCAAAGCGC TGGCGTCAAAGTTTCACAAGTCCGCGCAACTTACTGAGAAGCTGAAGATG GCCTGTGGGGTGCCTAGCATCGAATACAAGAAGCTTACCCAGGACGTCGA AACTCGTTGGTGATCGACATTTGAGCTGTGCATGAGCGCGTGGCACCCGA AGCCCGCCCTCGACTTGGTCACGATCGATGGCTTCGTCATGCCGACGGCA AATGAAGTCTGTCGGCATGCGATGCTCATCCTGGAGCCTTTCATGGAGGT CAGTATACTTTTCTTCCCGAGGGATGTGGCTGGTTATGATCTCGTTGTAA TGAATTCGTCTGCCTGAAGAGCTCCCCAGCGCTCTTTTCCTTTGTGGCGT ATGTCTCCCATCTCCGTTTTTCTGCGTCCATGTCTCTCCTCCAGGTCCAG AAGACGTGTAAGGGCAGCACCTACATCACCGGCAGCCTGGTGATCCCGAT GACACACAGCCTCCGTGTACATTCATCATACAAAGACGTTTTTGGCGGCT GCAATGCAAAATGGCGCCAATTCCGCTGTCCCTGGCGCCATGCTTCCCGT CTGCCGCGAGATGCTGCAGGTCTTCAACGATAAGTGGGGTGACGGCACAA ACATATGCACGTATGGCGAGGGGCCCCGCAGGCAGACGAAGGGCTTTACG AAGGTTCAGGTGCTCGCGACAGCGTTTGATCCTCGAACGCGCAGCCTCGT TGGTGTGCCGTCCCATGAGAAGGAGGTTGTCTGCGCCCTCGTCATGCGTG AGGTCGTGGAGCTGATGGTGGCGGAGCATACGGCGAGCGTTGCTGCCGCC GCCGCTGCCACTGCCGCCGTTGCGGATGGAACCCCAGGAGGTGAAGAGGA GGACCCTAGCGGCGGCAGCGCCGGTGAGGCGGCGCAAGCGCCATTGGTGA GGCGGCGGCATGCGAGTTTTCCAACGCAGATGGCGGCGGAAGAGGAGGAG GAGGGCAGCAGCAGCATGTCTTGCTGTGGTGAGACGGGTGCCACCGCTGC TTCGGGCCGCTTTGAACTCGTGGCGATGGACGAGGTGAAAGCCTTTCAGC GCATTCCACGGCTCAGCATGCAGGACCATAATGGCAAGTGGAACGACCCA CTGCTGTGGTGGCGGCACGGCGCTACCACCTGGAGTTCCCGGACATCAAG CTGGCGCGTTGGGTGCTCTGTGTGCCAGCGACGTCAGCGCCGTCAGAGCG GCTGTTCAGCTCTGCGGGGACGCAGCGGCGGGGCCGGCTGACTGACCATT CATGTTGAGACGCTTATTTTCTTGAGGAACGCATGGCCGGCGGTTGATCC TTGGCATAAGAGACACGCTCAAACGCGACCCGTCGAGGCGCATTACAGCC AGGAGAAGCAGAATATCCCCGTAACAGTTCTTTAATAAAGCTGTTATCTA TTA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1059:559..3261-

>mRNA_P-wetherbeei_contig1059.1.1 ID=mRNA_P-wetherbeei_contig1059.1.1|Name=mRNA_P-wetherbeei_contig1059.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=939bp|location=Sequence derived from alignment at P-wetherbeei_contig1059:559..3261- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGGGCGTGGGTGGTCAACGTACCGCCGCGGGAAGCTGAAGGGAAC
GGTCATTTGCGAAAACTGTGATACTCGACAAAGCGGAGGTCAATTACGGC
TCGTCGAAGTCGACGGACAAGGTGAAGCAGCATTACAAAATGCATCACAA
AGAAGCTTGTGTTACGTGGCGCTGCGGAGGACGACAAGGAGCACGACAAG
TCAGCAACAGGCGGCTTCGAAGAGGCAGAAAACCGAGCACGCCGACACTC
GGGCCTCCTTTGAAGTCAGCGCGCCGCCGTGGATCGAAGAGCTTTGTCGT
TTCGTGGCCGTGCAATATCAACCGCTCTCCATCGTCTCACCCCCCGGGTT
CAAAACTATGGTCAGTGTGCTCAACAAGCGGGCAGCCATGCCCATCTCCA
AGATGCTCTTCGACTACCTCGTGCGCTTCAAGCTGTCGCTGCACGGCGAC
ATCGCAGCTATGACGAAGGACCAGAAAGAGGCGGTGACAGTGGATGGCTG
GACGTCGCGGGCAGGCGACCAGTACTTCTCCCTGACGCTCCACTTCATCA
ATGAGCAGTGGGAGCTCACGTCGCTGGCGCTGGACTGCGTGAAACACGTC
GGGAGCACGTGCGCGTCGGATCTTGTGCGCATCGTTGAAGATCTGGTGGA
GAGGGCCAAGGTCACTTCCATCAACCGCGCCGCTGACTGCGAGCCGTCTA
TGGTGGCAGCCGGCCGTGAAACCAAGTTCCCGCATAGCGGCTGCTTGGCG
CACTGTCTAGAGAGCGTCACGGGCATCTTCTTCGACGCTTCCGGTGTGGC
AGGCATCATGAAGACCTTCAAAGCGCTGGCGTCAAAGTTTCACAAGTCCG
CGCAACTTACTGAGAAGCTGAAGATGGCCTGTGGGGTGCCTAGCATCGAA
TACAAGAAGCTTACCCAGGACGTCGAAACTCGTTGGTGA
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