mRNA_P-wetherbeei_contig10589.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: D7G0A4_ECTSI (Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxID=2870 RepID=D7G0A4_ECTSI) HSP 1 Score: 356 bits (914), Expect = 7.610e-123 Identity = 179/206 (86.89%), Postives = 191/206 (92.72%), Query Frame = 1 Query: 1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQGNVNLTAQTNKKKAACC 618 M+RNESPFDMQIKLLMIGDS GVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSF +IRNWV QI+QHADV VN+ILIGNKCDM+++REVS E+GAQLAAEYGIQFFETSAKNDINVEKGFITIAREVK+RLM DGP G++ GNVNL AQ +KKK CC Sbjct: 1 MSRNESPFDMQIKLLMIGDS-GVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRAAGNVNLNAQASKKKTGCC 205
BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: A0A836CCB2_9STRA (Rab8A, rab family GTPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCB2_9STRA) HSP 1 Score: 347 bits (890), Expect = 3.560e-119 Identity = 176/207 (85.02%), Postives = 193/207 (93.24%), Query Frame = 1 Query: 1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQGNVNLTAQTNK-KKAACC 618 MAR+ESPFDMQIKLLMIGDS GVGKTCLLLRYA+D FSQTFITTIGIDFKIKNI+LD KR+KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQ+IRNWV QI+QHADVHVN+ILIGNKCD+++EREVSTE+GAQLAAEYGIQFFETSAKNDINVEKGFIT+AREVKNRLM DG +QG + QGNV L+A KK++CC Sbjct: 1 MARHESPFDMQIKLLMIGDS-GVGKTCLLLRYASDHFSQTFITTIGIDFKIKNIELDTKRVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQSIRNWVAQIQQHADVHVNKILIGNKCDIDNEREVSTEEGAQLAAEYGIQFFETSAKNDINVEKGFITVAREVKNRLMADGGSQGARTQGNVALSAPAKGGKKSSCC 206
BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: K3WPX9_GLOUD (Uncharacterized protein n=28 Tax=Oomycota TaxID=4762 RepID=K3WPX9_GLOUD) HSP 1 Score: 323 bits (827), Expect = 1.210e-109 Identity = 162/206 (78.64%), Postives = 182/206 (88.35%), Query Frame = 1 Query: 1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQGNVNLTAQTNKKKAACC 618 MAR+E+PFDMQIKLLMIGDS GVGKTCLLLRYANDSFS TFITTIGIDFKIKNI+LD K++KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SFQ+IRNWVGQI+QHADVHVN+ILIGNKCDM D++ VSTE+G LA EYG++FFETSAKN+INVE GFI IAREVKNRLM +G G ++ NVNL+A+ K CC Sbjct: 1 MARHENPFDMQIKLLMIGDS-GVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVESGFIEIAREVKNRLMEEG---GPHKKENVNLSAKPAAPKKGCC 202
BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: A0A4D9D279_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D279_9STRA) HSP 1 Score: 314 bits (804), Expect = 3.960e-106 Identity = 158/206 (76.70%), Postives = 178/206 (86.41%), Query Frame = 1 Query: 1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQGNVNLTAQTNKKKAACC 618 MAR E+PFDMQIKLLMIGDS GVGKTCLLLRYANDSFS TFITTIGIDFKIKN++LDG+RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF++IRNWVGQI+QHADVHVN+ILIGNKCDM +R VSTE+G LA ++GIQFFETSAKNDINVEK F+TIAREVKNR++ DG + + V+ KK CC Sbjct: 1 MARQENPFDMQIKLLMIGDS-GVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGRRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVSTEEGQSLANDFGIQFFETSAKNDINVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKRSNEAKK--CC 203
BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: W7TKL6_9STRA (Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKL6_9STRA) HSP 1 Score: 313 bits (801), Expect = 2.650e-104 Identity = 162/231 (70.13%), Postives = 185/231 (80.09%), Query Frame = 1 Query: 1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQGNVNLTAQTNKKKAACC*AAQPAATLRMWARSRWIDSGGRDI 693 MAR E+PFDMQIKLLMIGDS GVGKTCLLLRYANDSFS TFITTIGIDFKIKN++LDG+RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF++IRNWVGQI+QHADVHVN+ILIGNKCDM +R VSTE+G LA ++GIQFFETSAKNDINVEK F+TIAREVKNR++ DG G + G + +A C W+R W + GR + Sbjct: 1 MARQENPFDMQIKLLMIGDS-GVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGRRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVSTEEGQSLANDFGIQFFETSAKNDINVEKSFVTIAREVKNRMLVDG---GPRATGGKAIVDAKRSNEAKKC-----------WSRG-WNEGVGRHV 215
BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: A0A024TZG5_9STRA (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TZG5_9STRA) HSP 1 Score: 309 bits (792), Expect = 3.500e-104 Identity = 161/215 (74.88%), Postives = 180/215 (83.72%), Query Frame = 1 Query: 1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQGN--VNL-------TAQTNKKKAACC 618 MARNE+PFDMQIKLLMIGDS GVGKTCLLLRYANDSFS TFITTIGIDFK+KNIDLDGK+IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF +IRNWVGQI+QHADVHVN+IL+GNKCDM D++ VSTE+G LA EYG++FFETSAKN+INVE GFI IA EVK RLM +G G ++ + VNL T +N K CC Sbjct: 1 MARNENPFDMQIKLLMIGDS-GVGKTCLLLRYANDSFSPTFITTIGIDFKVKNIDLDGKKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFNSIRNWVGQIQQHADVHVNKILVGNKCDMLDDKVVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIANEVKTRLMEEG---GPHKKSDLVVNLGKKGNDPTKASNGGKGGCC 211
BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: A0A6T5Q365_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q365_HETAK) HSP 1 Score: 307 bits (787), Expect = 1.700e-103 Identity = 156/206 (75.73%), Postives = 176/206 (85.44%), Query Frame = 1 Query: 1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQGNVNLTAQTNKKKAACC 618 MAR+E+ +DMQIKLLMIGDS GVGKTCLLLRYAN +FSQTFITTIGIDFKIKNI LDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF +IRNWV QI+QHADVHVN+ILIGNKCDM DER V+TE+G +LAAEYGIQFFETSAKNDI VE+ F+T+AREVK RL++D R+ + + QT K + C Sbjct: 1 MARHENAYDMQIKLLMIGDS-GVGKTCLLLRYANAAFSQTFITTIGIDFKIKNITLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRNSFNSIRNWVSQIQQHADVHVNKILIGNKCDMKDERVVTTEEGQKLAAEYGIQFFETSAKNDIQVEESFVTVAREVKERLINDV-----DRKTDARVNLQTQKSSSKSC 200
BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: A0A3R7WE67_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WE67_9STRA) HSP 1 Score: 306 bits (785), Expect = 6.160e-103 Identity = 161/215 (74.88%), Postives = 180/215 (83.72%), Query Frame = 1 Query: 1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQ--IWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDG-PAQGNQ------RQGNVNLTAQTNKKKAACC 618 MARNE+PFDMQIKLLMIGDS GVGKTCLLLRYANDSFS TFITTIGIDFK+KNIDLDGK+IKLQ IWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF +IRNWVGQI+QHADVHVN+IL+GNKCDM D++ VSTE+G LA EYGI+FFETSAKN+INVE GFI IA EVK RLM +G P + N ++G+ + T N K CC Sbjct: 10 MARNENPFDMQIKLLMIGDS-GVGKTCLLLRYANDSFSPTFITTIGIDFKVKNIDLDGKKIKLQVDIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFNSIRNWVGQIQQHADVHVNKILVGNKCDMLDDKVVSTEEGQALADEYGIKFFETSAKNNINVEGGFIEIANEVKTRLMEEGGPHKKNDLVVNLGKKGSNDPTKAGNGGKGGCC 223
BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: A0A7S2RB79_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RB79_9STRA) HSP 1 Score: 305 bits (781), Expect = 1.250e-102 Identity = 158/200 (79.00%), Postives = 171/200 (85.50%), Query Frame = 1 Query: 22 FDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQGNVNLTAQTNKKKA-ACC 618 FDMQIKLLMIGDS GVGKTCLLLRYANDSFS TFITTIGIDFKIKNI+LD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF +IRNWV QI+QHADVHVN+ILIGNKCDM D+R VS ++G +LA EYGIQFFETSAKNDI V+ GF+ IAREVKNRL+ DGP R G N + Q NK K ACC Sbjct: 7 FDMQIKLLMIGDS-GVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRTSFTSIRNWVSQIQQHADVHVNKILIGNKCDMEDQRMVSFDEGKKLAQEYGIQFFETSAKNDIEVDSGFVAIAREVKNRLIADGPTA--VRSGIHNPSHQNNKSKGRACC 203
BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Match: A0A7S4M6F2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M6F2_9STRA) HSP 1 Score: 304 bits (779), Expect = 2.800e-102 Identity = 151/207 (72.95%), Postives = 180/207 (86.96%), Query Frame = 1 Query: 1 MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQAIRNWVGQIKQHADVHVNQILIGNKCDMNDEREVSTEDGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKNRLMHDGPAQGNQRQG-NVNLTAQTNKKKAACC 618 M++ +P+DMQIKLLMIGDS GVGKTCLLLRYANDSFS TFITTIGIDFKIKN+D+DGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF++IRNWV QI+QHADVHVN+IL+GNKCDM DE+ VSTE+GA+LA E+GI+F+E SAKNDINVE+ FI IAR+VK+RL+ DG +G ++N Q +++ CC Sbjct: 1 MSQQSAPYDMQIKLLMIGDS-GVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVDIDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVSQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGAKLAKEFGIEFWECSAKNDINVEQAFIGIARDVKDRLVADGGGGPAANKGLSLNKPGQGSQRNRGCC 206 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10589.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10589.1.2 >prot_P-wetherbeei_contig10589.1.2 ID=prot_P-wetherbeei_contig10589.1.2|Name=mRNA_P-wetherbeei_contig10589.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=207bp MARNESPFDMQIKLLMIGDSAGVGKTCLLLRYANDSFSQTFITTIGIDFKback to top mRNA from alignment at P-wetherbeei_contig10589:64..2315+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10589.1.2 ID=mRNA_P-wetherbeei_contig10589.1.2|Name=mRNA_P-wetherbeei_contig10589.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2252bp|location=Sequence derived from alignment at P-wetherbeei_contig10589:64..2315+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10589:64..2315+ >mRNA_P-wetherbeei_contig10589.1.2 ID=mRNA_P-wetherbeei_contig10589.1.2|Name=mRNA_P-wetherbeei_contig10589.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=621bp|location=Sequence derived from alignment at P-wetherbeei_contig10589:64..2315+ (Phaeothamnion wetherbeei SAG_119_79)back to top |