mRNA_P-wetherbeei_contig10586.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10586.1.1
Unique NamemRNA_P-wetherbeei_contig10586.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10586.1.1 vs. uniprot
Match: D8LDX0_ECTSI (Aspartate Aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDX0_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 8.360e-87
Identity = 145/220 (65.91%), Postives = 165/220 (75.00%), Query Frame = 1
Query:    1 QERCEELVAAIMASPA-AAKMWVLSDEIYERIVYGVPHVCFAALPGMQARTMLVNGFSKSHAMTGYRVGYLAAPPAIIAAVTTIQGQITSCASSISQEAALAALEKASDDGMARSVEEMRGKRDFVLGRLQAIPDVKIAVPDGAFYALPDVSAYFGKSTPSGNFIGDSNDLCLQLLKEHKVALVAGDGFGCPMGVRISYATSMEDLEYAMDEFEKCLSSL 657
            +ERCEEL A +       A  WVL+DEIYERI Y  PHV FA+LPGM  RTM VNGFSKSHAMTGYR+GYLAAPP I  AVTTIQGQITSCASSISQ A LAAL   +D  M  S + MR KRDFVL RL  +P++  AVP+GAFY  PDVSA+FGKS P G  IG + DLCL LL+ H VALV GDGFG P G+RISYA SMED++ A+ EF+KC+SSL
Sbjct:  250 KERCEELAAVLSEEGGKGAGCWVLADEIYERITYDTPHVAFASLPGMFERTMTVNGFSKSHAMTGYRLGYLAAPPIITKAVTTIQGQITSCASSISQAAGLAAL-AVTDGEMQLSFDVMRKKRDFVLKRLSEMPNLVTAVPEGAFYVFPDVSAHFGKSAPDGTTIGGATDLCLYLLRAHSVALVTGDGFGYPKGIRISYAASMEDIDEALGEFDKCISSL 468          
BLAST of mRNA_P-wetherbeei_contig10586.1.1 vs. uniprot
Match: A0A836C900_9STRA (Aspartate aminotransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C900_9STRA)

HSP 1 Score: 268 bits (685), Expect = 6.380e-85
Identity = 141/220 (64.09%), Postives = 168/220 (76.36%), Query Frame = 1
Query:    1 QERCEELVAAIMASPAAAKMWVLSDEIYERIVYGVPHVCFAALPGMQARTMLVNGFSKSHAMTGYRVGYLAAPPAIIAAVTTIQGQITSCASSISQEAALAALEKASDDGMARSVEEMRGKRDFVLGRLQAIPDVKIAVPDGAFYALPDVSAYFGKSTPSGNFIGDSNDLCLQLLKEHKVALVAGDGFGCPMGVRISYATSMEDLEYAMDEFEKCLSSLR 660
            +E CEEL AA++  PAA+K+WVL+DEIYERIVY VPH  F A+PGM+ RTML+NGFSKSHAMTGYR+GY+AAP  I+ AVTTIQGQITSCASSI Q A LAAL  A D+ M  S + MR KRDFV+ RL+ IP + +A P GAFY LPDVSAY+G   P G  I     LCL LL+ HKVALV G+GFG   GVR+SYATSM DL  A++E E+CL+SL+
Sbjct:  246 RELCEEL-AAVLREPAASKVWVLADEIYERIVYDVPHYSFVAIPGMKERTMLINGFSKSHAMTGYRLGYMAAPLPIVKAVTTIQGQITSCASSIGQAAGLAALGVA-DEEMQLSFDTMRRKRDFVMERLRRIPKINVAEPQGAFYVLPDVSAYYGMHAPDGTLIDGPTPLCLYLLRAHKVALVTGEGFGYFNGVRLSYATSMHDLTLALNELEQCLASLQ 463          
BLAST of mRNA_P-wetherbeei_contig10586.1.1 vs. uniprot
Match: A0A097IUR7_9PHAE (Aspartate aminotransferase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IUR7_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 1.310e-84
Identity = 139/219 (63.47%), Postives = 161/219 (73.52%), Query Frame = 1
Query:    1 QERCEELVAAIMASPAAAKMWVLSDEIYERIVYGVPHVCFAALPGMQARTMLVNGFSKSHAMTGYRVGYLAAPPAIIAAVTTIQGQITSCASSISQEAALAALEKASDDGMARSVEEMRGKRDFVLGRLQAIPDVKIAVPDGAFYALPDVSAYFGKSTPSGNFIGDSNDLCLQLLKEHKVALVAGDGFGCPMGVRISYATSMEDLEYAMDEFEKCLSSL 657
            +ERCEEL A +      +  WVL+DEIYER+ Y   HV FA +PGM  RTM VNGFSKSH+MTGYR+GY+AAPP I  AVTTIQGQITSCASSISQ A LAAL    D+ M  S + MR KRDFVL RL  + D+  AVP GAFY  PDVSA+FGKS P G  IG + DLCL LL+ H VALV GDGFG P G+RISYA SMED++ A+ EF+KC+SSL
Sbjct:  246 KERCEELAAVLSEDXKGSGCWVLADEIYERLTYDTQHVAFATVPGMFERTMTVNGFSKSHSMTGYRLGYIAAPPIIAKAVTTIQGQITSCASSISQAAGLAAL-AVPDEEMQASFDVMREKRDFVLKRLSEMSDLVTAVPQGAFYVFPDVSAHFGKSAPDGTVIGGATDLCLYLLRAHCVALVTGDGFGYPKGIRISYAASMEDIDEALGEFDKCISSL 463          
BLAST of mRNA_P-wetherbeei_contig10586.1.1 vs. uniprot
Match: A0A097IUT5_9PHAE (Aspartate aminotransferase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IUT5_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 9.470e-84
Identity = 135/221 (61.09%), Postives = 165/221 (74.66%), Query Frame = 1
Query:    1 QERCEELVAAIMASPAAAK-MWVLSDEIYERIVYGVPHVCFAALPGMQARTMLVNGFSKSHAMTGYRVGYLAAPPAIIAAVTTIQGQITSCASSISQEAALAALEKASDDGMARSVEEMRGKRDFVLGRLQAIPDVKIAVPDGAFYALPDVSAYFGKSTPSGNFIGDSNDLCLQLLKEHKVALVAGDGFGCPMGVRISYATSMEDLEYAMDEFEKCLSSLR 660
            +E CEEL A +       + +WV++DEIYERIVY  PHV FA +PGM  RTM VNGFSKSHAMTGYR+GYLAAPP I+ AVTT+QGQ+TSCAS+ISQ A +AALE  SD+ M  S + MR KRDFV+ R+  IP +  A P GAFY LPDVS++FGK+ P G  IG + DLCL LL+ H VALV G+GFG P G+RISYA SMEDL  A+ EF++C+ SL+
Sbjct:  254 KELCEELAAVLSEKGGKGEGVWVMADEIYERIVYDTPHVAFAGMPGMWERTMTVNGFSKSHAMTGYRIGYLAAPPVIVKAVTTLQGQLTSCASAISQAAGMAALE-VSDEEMQASFDIMRAKRDFVMKRVAGIPGLTTAEPQGAFYVLPDVSSHFGKTAPDGTVIGGATDLCLYLLRAHSVALVTGEGFGYPKGIRISYAASMEDLAEALGEFDQCIRSLK 473          
BLAST of mRNA_P-wetherbeei_contig10586.1.1 vs. uniprot
Match: A0A097IUV0_9PHAE (Aspartate aminotransferase n=1 Tax=Colpomenia sinuosa TaxID=87236 RepID=A0A097IUV0_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 7.540e-83
Identity = 142/220 (64.55%), Postives = 158/220 (71.82%), Query Frame = 1
Query:    1 QERCEELVAAIMASPAAAK-MWVLSDEIYERIVYGVPHVCFAALPGMQARTMLVNGFSKSHAMTGYRVGYLAAPPAIIAAVTTIQGQITSCASSISQEAALAALEKASDDGMARSVEEMRGKRDFVLGRLQAIPDVKIAVPDGAFYALPDVSAYFGKSTPSGNFIGDSNDLCLQLLKEHKVALVAGDGFGCPMGVRISYATSMEDLEYAMDEFEKCLSSL 657
            +ERCEEL A +          WVL+DEIYERI Y  PHV FA +PGM  RTM VNGFSKSHAMTGYR+GYLAAPP I  AVTTIQGQITSCASSISQ A LAAL   SD+ M  S + MR KRDFVL RL  +P +  AVP GAFY  PDVSA+FGKS P G  IG   DLCL LL+ H VALV GDGFG    +RISYA SME++E A+ EF+KCL SL
Sbjct:  253 KERCEELAAVLSEEGGKGSGCWVLADEIYERITYDTPHVAFATIPGMFERTMTVNGFSKSHAMTGYRLGYLAAPPIITKAVTTIQGQITSCASSISQAAGLAAL-AVSDEEMQASFDVMRKKRDFVLKRLSEMPGLVTAVPQGAFYVFPDVSAHFGKSAPDGTVIGGPTDLCLYLLRAHSVALVTGDGFGYSKCIRISYAASMEEIEEALAEFDKCLCSL 471          
BLAST of mRNA_P-wetherbeei_contig10586.1.1 vs. uniprot
Match: A0A097IUS5_SACJA (Aspartate aminotransferase n=2 Tax=Saccharina TaxID=309357 RepID=A0A097IUS5_SACJA)

HSP 1 Score: 259 bits (661), Expect = 2.130e-81
Identity = 137/221 (61.99%), Postives = 160/221 (72.40%), Query Frame = 1
Query:    1 QERCEELVAAIMASPAAAK-MWVLSDEIYERIVYGVPHVCFAALPGMQARTMLVNGFSKSHAMTGYRVGYLAAPPAIIAAVTTIQGQITSCASSISQEAALAALEKASDDGMARSVEEMRGKRDFVLGRLQAIPDVKIAVPDGAFYALPDVSAYFGKSTPSGNFIGDSNDLCLQLLKEHKVALVAGDGFGCPMGVRISYATSMEDLEYAMDEFEKCLSSLR 660
            +ERCEEL A +       K +WVL+DEIYERI Y  PHV FA +PGM  RTM VNGFSKSHAMTGYR+GYLAA P II A T IQGQITSCASSISQ A LAAL   SD  M  S + MR KRDFV+ RLQ +P +  AVP+GAFY  PDVS ++GK+ P G  IG + DLCL LL+ H VALV G+GFG P G+R+SYA SME +  A++E EKCL SL+
Sbjct:  237 KERCEELAAVLSEEGGKGKGVWVLADEIYERITYDTPHVAFATMPGMFERTMTVNGFSKSHAMTGYRLGYLAATPIIIKAATIIQGQITSCASSISQAAGLAAL-NVSDAEMQTSFDIMRQKRDFVVKRLQEMPGLTTAVPEGAFYVFPDVSTHYGKTAPDGTVIGGATDLCLYLLRVHSVALVTGEGFGYPKGIRLSYAASMEAITEALEELEKCLVSLK 456          
BLAST of mRNA_P-wetherbeei_contig10586.1.1 vs. uniprot
Match: A0A097IUX3_9PHAE (Aspartate aminotransferase n=1 Tax=Sargassum thunbergii TaxID=127542 RepID=A0A097IUX3_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 4.650e-81
Identity = 132/221 (59.73%), Postives = 160/221 (72.40%), Query Frame = 1
Query:    1 QERCEELVAAIMASPAAAK-MWVLSDEIYERIVYGVPHVCFAALPGMQARTMLVNGFSKSHAMTGYRVGYLAAPPAIIAAVTTIQGQITSCASSISQEAALAALEKASDDGMARSVEEMRGKRDFVLGRLQAIPDVKIAVPDGAFYALPDVSAYFGKSTPSGNFIGDSNDLCLQLLKEHKVALVAGDGFGCPMGVRISYATSMEDLEYAMDEFEKCLSSLR 660
            +++CEEL A +         +WV++DEIYERI Y  PH  FA+LPGM  RTM VNGFSKSHAMTGYR+GY+A PP I+ A+ TIQGQ+TSCASSISQ A LAAL +  DD M  S + MR KRDFVL  L   P VK AVP GAFY LPDVSA+FGK  P G  IG + DLC  LL+ H+VALV G+ FG P G+RISYA S+E++  A+ +FE+CLSSL+
Sbjct:  253 KQQCEELAAVLSEEGGKGDGVWVMADEIYERITYDTPHAAFASLPGMYERTMTVNGFSKSHAMTGYRLGYIAGPPVIVKAIATIQGQLTSCASSISQAAGLAAL-RVRDDEMQHSFDVMREKRDFVLKCLSKTPGVKTAVPQGAFYVLPDVSAHFGKEAPDGTVIGGATDLCRYLLRAHRVALVTGESFGFPRGIRISYAASLEEINEALGQFEECLSSLK 472          
BLAST of mRNA_P-wetherbeei_contig10586.1.1 vs. uniprot
Match: A0A097IUR0_SCYLO (Aspartate aminotransferase n=3 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A097IUR0_SCYLO)

HSP 1 Score: 258 bits (658), Expect = 9.280e-81
Identity = 136/220 (61.82%), Postives = 158/220 (71.82%), Query Frame = 1
Query:    1 QERCEELVAAIMASPAAAK-MWVLSDEIYERIVYGVPHVCFAALPGMQARTMLVNGFSKSHAMTGYRVGYLAAPPAIIAAVTTIQGQITSCASSISQEAALAALEKASDDGMARSVEEMRGKRDFVLGRLQAIPDVKIAVPDGAFYALPDVSAYFGKSTPSGNFIGDSNDLCLQLLKEHKVALVAGDGFGCPMGVRISYATSMEDLEYAMDEFEKCLSSL 657
            +ERCEEL A +          WVL+DEIYERI Y  PHV FA +PGM  RTM VNGFSKSH+MTGYR+GYLA+PP I  AVT IQGQITSCASSISQ A L AL   SD+ M  + + MR KRDFV+ RL  +PD+  AVP GAFY  PDVSA+FGKS P G  IG + DLCL LL+ H VALV GDGFG    +RISYA SME+++ A+ EF+KCL SL
Sbjct:  253 KERCEELAAVLSEEGGKGSGCWVLADEIYERITYDTPHVAFATIPGMFERTMTVNGFSKSHSMTGYRLGYLASPPIITKAVTIIQGQITSCASSISQAAGLVAL-TVSDEEMQATFDVMRKKRDFVIKRLSEMPDLATAVPQGAFYVFPDVSAHFGKSAPDGTVIGGATDLCLYLLRAHSVALVTGDGFGYSKCIRISYAASMEEIDEALAEFDKCLCSL 471          
BLAST of mRNA_P-wetherbeei_contig10586.1.1 vs. uniprot
Match: A0A097IUP5_UNDPI (Aspartate aminotransferase n=2 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A097IUP5_UNDPI)

HSP 1 Score: 253 bits (647), Expect = 2.700e-79
Identity = 133/221 (60.18%), Postives = 160/221 (72.40%), Query Frame = 1
Query:    1 QERCEELVAAIMASPAAAK-MWVLSDEIYERIVYGVPHVCFAALPGMQARTMLVNGFSKSHAMTGYRVGYLAAPPAIIAAVTTIQGQITSCASSISQEAALAALEKASDDGMARSVEEMRGKRDFVLGRLQAIPDVKIAVPDGAFYALPDVSAYFGKSTPSGNFIGDSNDLCLQLLKEHKVALVAGDGFGCPMGVRISYATSMEDLEYAMDEFEKCLSSLR 660
            +ERCEEL A +       K +WV+SDEIYERI Y  PHV FA++PGM  RTM VNGFSKSHAMTGYR+GYLAA P I+    TIQGQITSCASSISQ A +AAL+  SD  M  S + MR KRDFVL RL  +P +  AVP+GAFY  PDVS+++GK+ P G  IG + DLCL LL+ H VA+V G+GFG P G+R+SYA SME +  A+ E EKCL SL+
Sbjct:  237 KERCEELAAVLSEEGGKGKGVWVMSDEIYERITYDTPHVAFASIPGMFERTMTVNGFSKSHAMTGYRLGYLAATPIIVKTAATIQGQITSCASSISQAAGIAALD-VSDAEMQTSFDVMRQKRDFVLKRLAEMPGLITAVPEGAFYVFPDVSSHYGKTAPDGTVIGGATDLCLYLLRVHSVAVVTGEGFGYPKGIRLSYAASMEIITEALAELEKCLVSLK 456          
BLAST of mRNA_P-wetherbeei_contig10586.1.1 vs. uniprot
Match: A0A7S4DF05_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DF05_HETAK)

HSP 1 Score: 244 bits (622), Expect = 4.610e-76
Identity = 120/214 (56.07%), Postives = 159/214 (74.30%), Query Frame = 1
Query:   16 ELVAAIMASPAAAKMWVLSDEIYERIVYGVPHVCFAALPGMQARTMLVNGFSKSHAMTGYRVGYLAAPPAIIAAVTTIQGQITSCASSISQEAALAALEKASDDGMARSVEEMRGKRDFVLGRLQAIPDVKIAVPDGAFYALPDVSAYFGKSTPSGNFIGDSNDLCLQLLKEHKVALVAGDGFGCPMGVRISYATSMEDLEYAMDEFEKCLSSL 657
            + +A ++  P    +WVLSDEIYER+VY   HV FAALPG + RT++VNGFSKSHAMTGYR+GY+A PPA++ AVTT+QGQ+TSCASS++Q A +AAL K  D+ +  S++ M+ KRDFV+ +L+++P VK   P GAFY LPD+S+YFGK TP+G  I D    C+ LLKE K A V G+GFG    VRISYA S E++E A+++F  CL+SL
Sbjct:  198 DALAEVLRKPENKDIWVLSDEIYERLVYDCEHVSFAALPGFKDRTIIVNGFSKSHAMTGYRLGYMAGPPAVVKAVTTVQGQLTSCASSLAQAAGVAAL-KVPDEELQESIDLMKKKRDFVMEKLRSLPGVKCPEPKGAFYVLPDISSYFGKRTPAGEIIKDDTAFCIYLLKEFKTAFVPGEGFGSKGTVRISYAASFEEIEAALNQFSACLASL 410          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10586.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDX0_ECTSI8.360e-8765.91Aspartate Aminotransferase n=2 Tax=Ectocarpus TaxI... [more]
A0A836C900_9STRA6.380e-8564.09Aspartate aminotransferase (Fragment) n=1 Tax=Trib... [more]
A0A097IUR7_9PHAE1.310e-8463.47Aspartate aminotransferase n=1 Tax=Punctaria latif... [more]
A0A097IUT5_9PHAE9.470e-8461.09Aspartate aminotransferase n=1 Tax=Desmarestia vir... [more]
A0A097IUV0_9PHAE7.540e-8364.55Aspartate aminotransferase n=1 Tax=Colpomenia sinu... [more]
A0A097IUS5_SACJA2.130e-8161.99Aspartate aminotransferase n=2 Tax=Saccharina TaxI... [more]
A0A097IUX3_9PHAE4.650e-8159.73Aspartate aminotransferase n=1 Tax=Sargassum thunb... [more]
A0A097IUR0_SCYLO9.280e-8161.82Aspartate aminotransferase n=3 Tax=Scytosiphonacea... [more]
A0A097IUP5_UNDPI2.700e-7960.18Aspartate aminotransferase n=2 Tax=Undaria pinnati... [more]
A0A7S4DF05_HETAK4.610e-7656.07Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10586contigP-wetherbeei_contig10586:170..1819 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LDX0
Preferred nameASP2
PFAMsAminotran_1_2,PDH,PDT
Model size663
Max annot lvl2759|Eukaryota
KEGG rclassRC00006
KEGG koko:K12586,ko:K15849
KEGG ReactionR00694,R00734,R01731,R07276
KEGG Pathwayko00350,ko00360,ko00400,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,ko03018,map00350,map00360,map00400,map00950,map00960,map01100,map01110,map01130,map01230,map03018
KEGG ModuleM00040,M00391
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004069,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009095,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016740,GO:0016769,GO:0019438,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0033853,GO:0033854,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0061458,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons4
Evalue1.37e-87
EggNOG OGsCOG0436@1|root,KOG0257@2759|Eukaryota
Ec32 ortholog descriptionAspartate Aminotransferase
Ec32 orthologEc-23_003500.1
EC2.6.1.1,2.6.1.78,2.6.1.79
Descriptiontransferase activity, transferring nitrogenous groups
Cds size663
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185875.9725432-CDS-P-wetherbeei_contig10586:169..3661683185875.9725432-CDS-P-wetherbeei_contig10586:169..366Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10586 170..366 +
1683185875.984693-CDS-P-wetherbeei_contig10586:656..8221683185875.984693-CDS-P-wetherbeei_contig10586:656..822Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10586 657..822 +
1683185875.994286-CDS-P-wetherbeei_contig10586:1298..15681683185875.994286-CDS-P-wetherbeei_contig10586:1298..1568Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10586 1299..1568 +
1683185876.0036526-CDS-P-wetherbeei_contig10586:1789..18191683185876.0036526-CDS-P-wetherbeei_contig10586:1789..1819Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10586 1790..1819 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10586.1.1prot_P-wetherbeei_contig10586.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10586 170..1819 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10586.1.1

>prot_P-wetherbeei_contig10586.1.1 ID=prot_P-wetherbeei_contig10586.1.1|Name=mRNA_P-wetherbeei_contig10586.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=221bp
QERCEELVAAIMASPAAAKMWVLSDEIYERIVYGVPHVCFAALPGMQART
MLVNGFSKSHAMTGYRVGYLAAPPAIIAAVTTIQGQITSCASSISQEAAL
AALEKASDDGMARSVEEMRGKRDFVLGRLQAIPDVKIAVPDGAFYALPDV
SAYFGKSTPSGNFIGDSNDLCLQLLKEHKVALVAGDGFGCPMGVRISYAT
SMEDLEYAMDEFEKCLSSLR*
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mRNA from alignment at P-wetherbeei_contig10586:170..1819+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10586.1.1 ID=mRNA_P-wetherbeei_contig10586.1.1|Name=mRNA_P-wetherbeei_contig10586.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1650bp|location=Sequence derived from alignment at P-wetherbeei_contig10586:170..1819+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGAGCGCTGCGAGGAGCTTGTGGCGGCGATTATGGCATCGCCGGCAGC CGCCAAGATGTGGGTACTGTCAGACGAAATCTACGAGCGGATCGTCTACG GCGTGCCGCACGTCTGCTTCGCGGCGCTGCCGGGCATGCAAGCGCGGACA ATGCTTGTGAACGGCTTCTCGAAGTCGCACGCCATGACCGGCTACCGGTA AGCGGCGGGAGGGGTGGCGGGATAGCGCAGGGTGGGGCGGCAGCGGGGGC GCCTGGGTTGCGGTAGAGAGAGTGCTGCTGGAGCCGGCAGTGCGATAGTA ACCAGAATAAGACTCGTTGGTGGCAAGATGAAATACTGCTGCCCTCTGGC ATCCCTCCTGTTTTCCTCTTAGCTTGCTTTTTTGCTGTTCTACTTTCGTC ACGTCTACTTGCGACCTTGCTCACAAACGCAAGCCGCTGCCGCCGCTGCC GCCGCCGCCGCCGCGCCCCCCCCCCAAATCATTCCAGAGTCGGCTACCTG GCGGCGCCGCCGGCCATCATCGCGGCAGTAACGACCATCCAGGGGCAGAT CACGTCGTGCGCCAGTTCCATCTCGCAGGAGGCGGCGCTGGCGGCGCTCG AAAAGGCGTCCGACGACGGCATGGCGCGGAGCGTCGAGGAGATGCGTGGC AAGGTGCGCCTGGCGCCGACAATAGGCCGATAATGGACGCGGAAAGGGGA AGGGGCCGGGAAGGGGCCGGTCAGGGGCTGGGTGGGGGCCAGTACGGGGC TGGGCGGGGGCCGGGGTCGGAGCCGTACATCAGGGCGATGAGAGGACTTG GAAAGTTCTTGGGAAGGGCCTCTGGTCCGGTTTATGTTGTCGTCACAAGG CTTTCCTGTTGCTGTTGGCCTTTTATTGTTTGACGGCCGACGAAAGTGAT GCACTTTATGTGTCGCGTTATGGCTGGTGGAATTTCCTGTTCGCTTCACT TCATTCATTTGCTGTGGAGATCGCACAGCTGGTCACCGCGGCGGACCCGG CGGCCGCGCGCACCGCGCCATCCTGGCACCATTCGGACGCCGCCCGCCAT TTCCAGTCGCTGACATCACTGCGCCCACCTGGAGCCCGCCCACCCATCTC TCAAACCCTCCCTCCACAAAAATGCGCAGCGAGACTTCGTCCTGGGGCGG CTTCAGGCCATCCCCGACGTCAAGATCGCCGTCCCCGACGGCGCCTTCTA CGCGCTGCCGGATGTTTCGGCGTATTTCGGAAAGAGCACGCCTTCCGGGA ATTTTATCGGCGACTCGAACGACCTCTGCCTGCAGTTGCTCAAGGAGCAC AAGGTGGCGTTGGTAGCAGGGGACGGCTTTGGATGTCCGATGGGCGTTCG GATATCGTACGCCACGTCCATGGAGGACCTCGAGTATGCAATGGACGAGG TGAGGACTATTCTGCTCGATTTGAAATCTGGATGTGTAGATTGCCCGAGG AATGAAGAAGCATTTCCGGATCCGTGTTTAGTACCGGCCATTCGAAGGAC CGCTTTGTTCCCTCCAGAACGGCTGCAATGGCTGGCAATGTGGCTCACCC TCGCTTTTCTGCGCTGCCGCCCACCCGTCGATTCACCCCCCCTCGTTTCC GGCACTGTGCTATTTCGCAGTTCGAGAAATGCCTGTCTTCTCTGCGATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10586:170..1819+

>mRNA_P-wetherbeei_contig10586.1.1 ID=mRNA_P-wetherbeei_contig10586.1.1|Name=mRNA_P-wetherbeei_contig10586.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=663bp|location=Sequence derived from alignment at P-wetherbeei_contig10586:170..1819+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGAGCGCTGCGAGGAGCTTGTGGCGGCGATTATGGCATCGCCGGCAGC
CGCCAAGATGTGGGTACTGTCAGACGAAATCTACGAGCGGATCGTCTACG
GCGTGCCGCACGTCTGCTTCGCGGCGCTGCCGGGCATGCAAGCGCGGACA
ATGCTTGTGAACGGCTTCTCGAAGTCGCACGCCATGACCGGCTACCGAGT
CGGCTACCTGGCGGCGCCGCCGGCCATCATCGCGGCAGTAACGACCATCC
AGGGGCAGATCACGTCGTGCGCCAGTTCCATCTCGCAGGAGGCGGCGCTG
GCGGCGCTCGAAAAGGCGTCCGACGACGGCATGGCGCGGAGCGTCGAGGA
GATGCGTGGCAAGCGAGACTTCGTCCTGGGGCGGCTTCAGGCCATCCCCG
ACGTCAAGATCGCCGTCCCCGACGGCGCCTTCTACGCGCTGCCGGATGTT
TCGGCGTATTTCGGAAAGAGCACGCCTTCCGGGAATTTTATCGGCGACTC
GAACGACCTCTGCCTGCAGTTGCTCAAGGAGCACAAGGTGGCGTTGGTAG
CAGGGGACGGCTTTGGATGTCCGATGGGCGTTCGGATATCGTACGCCACG
TCCATGGAGGACCTCGAGTATGCAATGGACGAGTTCGAGAAATGCCTGTC
TTCTCTGCGATGA
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