mRNA_P-wetherbeei_contig10580.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10580.1.1
Unique NamemRNA_P-wetherbeei_contig10580.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig10580.1.1 vs. uniprot
Match: A0A835XZ70_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XZ70_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 4.830e-9
Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:    1 MIQPLLDAGADLNAQNRNGQTPLHAAALVGNLETCKVLLDARARPDIAD 147
            + Q +L AGAD+NA+N +G TPL  AAL GNLE  +VLLDARA  DIA+
Sbjct:  412 VTQAVLQAGADVNARNEHGHTPLALAALRGNLEAVRVLLDARADADIAE 460
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BLAST of mRNA_P-wetherbeei_contig10580.1.1 vs. uniprot
Match: A0A6H5KTN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTN1_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 2.830e-7
Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 1 
Query:    1 MIQPLLDAGADLNAQNRNGQTPLHAAALVGNLETCKVLLDARARP 135
            +I+ LL+AGAD+ A N NG+TPLH AA  GN  T ++LL+A ARP
Sbjct:  227 IIRMLLEAGADVEAVNPNGRTPLHLAAAEGNCSTARLLLEAGARP 271
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BLAST of mRNA_P-wetherbeei_contig10580.1.1 vs. uniprot
Match: A0A1M5XL89_9FLAO (Ankyrin repeat-containing protein n=1 Tax=Flavobacterium sp. CF108 TaxID=1882758 RepID=A0A1M5XL89_9FLAO)

HSP 1 Score: 52.8 bits (125), Expect = 4.270e-7
Identity = 24/54 (44.44%), Postives = 39/54 (72.22%), Query Frame = 1 
Query:    1 MIQPLLDAGADLNAQNRNGQTPLHAAALVGNLETCKVLLDARARPDIADCNGVT 162
            +I+ LL+ GAD+N Q++NG T LH +A  GN+++  +LL+ +A P+I D +G T
Sbjct:   50 IIKWLLEQGADINLQDKNGYTALHFSAQEGNIDSTMLLLENKANPNIKDIHGNT 103
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BLAST of mRNA_P-wetherbeei_contig10580.1.1 vs. uniprot
Match: A0A3N4L082_9PEZI (Ankyrin n=2 Tax=Morchella TaxID=5193 RepID=A0A3N4L082_9PEZI)

HSP 1 Score: 53.5 bits (127), Expect = 7.240e-7
Identity = 23/54 (42.59%), Postives = 37/54 (68.52%), Query Frame = 1 
Query:    1 MIQPLLDAGADLNAQNRNGQTPLHAAALVGNLETCKVLLDARARPDIADCNGVT 162
            +++ LLD GA +  +N+  QTPL+AAA +GN E+ ++LL+  A P + D +G T
Sbjct:  448 LVRRLLDKGATVGPKNKRNQTPLYAAAAIGNAESVRILLERGASPRVRDSSGKT 501
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BLAST of mRNA_P-wetherbeei_contig10580.1.1 vs. uniprot
Match: A0A158QGD0_HYMDI (PDZ domain-containing protein n=4 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A158QGD0_HYMDI)

HSP 1 Score: 53.5 bits (127), Expect = 7.290e-7
Identity = 26/54 (48.15%), Postives = 33/54 (61.11%), Query Frame = 1 
Query:    1 MIQPLLDAGADLNAQNRNGQTPLHAAALVGNLETCKVLLDARARPDIADCNGVT 162
            MI+ L+  GA  + + RNG TPLH AA +GN E  K LLD    P+  D NG+T
Sbjct:  189 MIKTLIAGGAHKDYRTRNGITPLHRAAAIGNFEAVKALLDFGQSPNTLDSNGLT 242
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BLAST of mRNA_P-wetherbeei_contig10580.1.1 vs. uniprot
Match: A0A158QHE4_RODNA (Uncharacterized protein n=1 Tax=Rodentolepis nana TaxID=102285 RepID=A0A158QHE4_RODNA)

HSP 1 Score: 53.5 bits (127), Expect = 7.300e-7
Identity = 26/54 (48.15%), Postives = 33/54 (61.11%), Query Frame = 1 
Query:    1 MIQPLLDAGADLNAQNRNGQTPLHAAALVGNLETCKVLLDARARPDIADCNGVT 162
            MI+ L+  GA  + + RNG TPLH AA +GN E  K LLD    P+  D NG+T
Sbjct:  189 MIKVLIAGGAHKDYRTRNGVTPLHKAAAIGNFEAVKALLDFGQSPNTLDSNGLT 242
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BLAST of mRNA_P-wetherbeei_contig10580.1.1 vs. uniprot
Match: UPI001D04367F (uncharacterized protein n=1 Tax=Morchella sextelata TaxID=1174677 RepID=UPI001D04367F)

HSP 1 Score: 51.2 bits (121), Expect = 1.080e-6
Identity = 23/54 (42.59%), Postives = 36/54 (66.67%), Query Frame = 1 
Query:    1 MIQPLLDAGADLNAQNRNGQTPLHAAALVGNLETCKVLLDARARPDIADCNGVT 162
            +++ LLD GA +  +N+  QTPL+AAA +GN E+ + LL+  A P + D +G T
Sbjct:   55 LVRRLLDGGATVGPKNKLNQTPLYAAASIGNAESVRTLLERGASPRVRDSSGKT 108
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BLAST of mRNA_P-wetherbeei_contig10580.1.1 vs. uniprot
Match: A0A218KM91_9RICK (Uncharacterized protein n=1 Tax=Wolbachia endosymbiont of Folsomia candida TaxID=169402 RepID=A0A218KM91_9RICK)

HSP 1 Score: 52.4 bits (124), Expect = 1.850e-6
Identity = 28/54 (51.85%), Postives = 33/54 (61.11%), Query Frame = 1 
Query:    1 MIQPLLDAGADLNAQNRNGQTPLHAAALVGNLETCKVLLDARARPDIADCNGVT 162
            M + LLDAGAD NAQN  G TPLH AA  GNL   ++LL   A P + + N  T
Sbjct:   60 MTRCLLDAGADFNAQNEEGNTPLHNAAWSGNLFATQLLLQKEADPFLKNNNHQT 113
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BLAST of mRNA_P-wetherbeei_contig10580.1.1 vs. uniprot
Match: A0A8H4XDJ7_9HYPO (HET domain-containing protein n=1 Tax=Fusarium sarcochroum TaxID=1208366 RepID=A0A8H4XDJ7_9HYPO)

HSP 1 Score: 52.0 bits (123), Expect = 2.570e-6
Identity = 24/49 (48.98%), Postives = 32/49 (65.31%), Query Frame = 1 
Query:   13 LLDAGADLNAQNRNGQTPLHAAALVGNLETCKVLLDARARPDIADCNGV 159
            LL  GAD+NAQ R+G TPLH A   GN+   KVL++  A  D+ D +G+
Sbjct: 1063 LLQEGADINAQGRDGVTPLHCAVKKGNINIAKVLVETGAAIDVPDSSGM 1111
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BLAST of mRNA_P-wetherbeei_contig10580.1.1 vs. uniprot
Match: A0A087ULF5_STEMI (Protein phosphatase 1 regulatory subunit 12A (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087ULF5_STEMI)

HSP 1 Score: 51.6 bits (122), Expect = 3.480e-6
Identity = 27/50 (54.00%), Postives = 31/50 (62.00%), Query Frame = 1 
Query:   13 LLDAGADLNAQNRNGQTPLHAAALVGNLETCKVLLDARARPDIADCNGVT 162
            L+  GADLNAQ+ +G TPLHAAA  G  E C VL D  A  DI +  G T
Sbjct:  207 LIQVGADLNAQDNDGWTPLHAAAHWGQKEACAVLADNLANMDIQNLAGQT 256
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10580.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835XZ70_9CHLO4.830e-961.22Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A6H5KTN1_9PHAE2.830e-757.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1M5XL89_9FLAO4.270e-744.44Ankyrin repeat-containing protein n=1 Tax=Flavobac... [more]
A0A3N4L082_9PEZI7.240e-742.59Ankyrin n=2 Tax=Morchella TaxID=5193 RepID=A0A3N4L... [more]
A0A158QGD0_HYMDI7.290e-748.15PDZ domain-containing protein n=4 Tax=Hymenolepis ... [more]
A0A158QHE4_RODNA7.300e-748.15Uncharacterized protein n=1 Tax=Rodentolepis nana ... [more]
UPI001D04367F1.080e-642.59uncharacterized protein n=1 Tax=Morchella sextelat... [more]
A0A218KM91_9RICK1.850e-651.85Uncharacterized protein n=1 Tax=Wolbachia endosymb... [more]
A0A8H4XDJ7_9HYPO2.570e-648.98HET domain-containing protein n=1 Tax=Fusarium sar... [more]
A0A087ULF5_STEMI3.480e-654.00Protein phosphatase 1 regulatory subunit 12A (Frag... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10580contigP-wetherbeei_contig10580:1427..1957 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog45351.EDO48893
PFAMsAnk_2,Ank_4,PRKG1_interact
Model size162
Max annot lvl2759|Eukaryota
KEGG koko:K06270,ko:K17458,ko:K17566
KEGG Pathwayko04022,ko04024,ko04270,ko04510,ko04611,ko04810,ko04921,ko05205,map04022,map04024,map04270,map04510,map04611,map04810,map04921,map05205
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005911,GO:0005912,GO:0005913,GO:0007275,GO:0008150,GO:0009653,GO:0009790,GO:0009792,GO:0010171,GO:0010172,GO:0030054,GO:0032501,GO:0032502,GO:0044424,GO:0044464,GO:0048598,GO:0048856,GO:0070161
Exons2
Evalue8.76e-09
EggNOG OGsCOG0666@1|root,KOG0505@2759|Eukaryota
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-07_001930.1
Descriptionpositive regulation of myosin-light-chain-phosphatase activity
Cds size162
COG categoryO
BRITEko00000,ko00001,ko01009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185875.832763-CDS-P-wetherbeei_contig10580:1426..15341683185875.832763-CDS-P-wetherbeei_contig10580:1426..1534Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10580 1427..1534 +
1683185875.8435385-CDS-P-wetherbeei_contig10580:1903..19571683185875.8435385-CDS-P-wetherbeei_contig10580:1903..1957Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10580 1904..1957 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10580.1.1prot_P-wetherbeei_contig10580.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10580 1427..1957 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10580.1.1

>prot_P-wetherbeei_contig10580.1.1 ID=prot_P-wetherbeei_contig10580.1.1|Name=mRNA_P-wetherbeei_contig10580.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=54bp
MIQPLLDAGADLNAQNRNGQTPLHAAALVGNLETCKVLLDARARPDIADC
NGVT
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mRNA from alignment at P-wetherbeei_contig10580:1427..1957+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10580.1.1 ID=mRNA_P-wetherbeei_contig10580.1.1|Name=mRNA_P-wetherbeei_contig10580.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig10580:1427..1957+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATCCAACCGCTCCTGGATGCCGGAGCGGATCTGAATGCTCAGAACCG
AAACGGCCAGACGCCGCTGCATGCCGCCGCCCTCGTGGGGAACCTCGAGA
CCTGCAAGGTGAGCTTTCGTCGTTCGGTGTCGCCGCCGTTTGGGCCTTTG
TCCCATACTATTGTTCTGTATTTACTCTTGGAGCATATGAGCTGCTGTTG
CATTTCTGCGCCATCGGCTTTCCACCTTTAAAAACAGGGGGTCTGCGGTT
TCAGGAGATTACGAATGCGTCGGCGTGTGGTTCGCTTTGTGCCACGCCTC
CCACGCCCGCCGCGTCGGAGGTAAGAGGGAAGGCATTTGAGGGATGACAG
CGCAGACAGTCAGTCACTCCGGCCCTTCAGGTGAAGTTATCTGTGTTCTC
TGCCCACGCGCACCTTTGCTTCGCTGCGCTGCACCACCGTCCCACTGCCC
ACCGGCGTGACGGTGTCTCCCGCACAGGTGCTTCTCGACGCCAGAGCGAG
GCCGGACATCGCCGACTGCAACGGCGTCACA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10580:1427..1957+

>mRNA_P-wetherbeei_contig10580.1.1 ID=mRNA_P-wetherbeei_contig10580.1.1|Name=mRNA_P-wetherbeei_contig10580.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=162bp|location=Sequence derived from alignment at P-wetherbeei_contig10580:1427..1957+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATCCAACCGCTCCTGGATGCCGGAGCGGATCTGAATGCTCAGAACCG
AAACGGCCAGACGCCGCTGCATGCCGCCGCCCTCGTGGGGAACCTCGAGA
CCTGCAAGGTGCTTCTCGACGCCAGAGCGAGGCCGGACATCGCCGACTGC
AACGGCGTCACA
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