mRNA_P-wetherbeei_contig10559.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10559.1.1
Unique NamemRNA_P-wetherbeei_contig10559.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10559.1.1 vs. uniprot
Match: A0A3C0TV89_9PROT (Phosphate-specific transport system accessory protein PhoU n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TV89_9PROT)

HSP 1 Score: 338 bits (866), Expect = 6.670e-115
Identity = 174/240 (72.50%), Postives = 204/240 (85.00%), Query Frame = 1
Query:   31 MVSEHIVKSFDDELNRLASMIAEMGGLAESQLADAISALSRRDETLASSVIVQDVRLDALETDIDAQVIRMLALRQPQALDLRAVIVALKISAELERIGDYAKNVAKRTLTLMQAAAVGTASNTIVRMGAIVGGMISNVIDAYLNADILKAEEVRARDHDVDQMHTSLFRELLTYMMEDPRNITACTHLLFIAKNIERIGDHVTNIAENVHFLVAGQIPGHDRPKSDFSSSTIVNVEDNA 750
            M ++HIVK+FD++L ++ +MIAEMGGLAESQLA+A+ AL RRDE LA+ VI  D R D LE DI+AQVIR+LALRQP ALDLR V+ ALKI+AELERIGDYAKNVAKR+LTLMQ   VG A+NTI+RMG+I G MI NVIDAYLN DI+KA+EVRARD DVDQ+HT LFRELLTYMMEDPRNITACTHLLF+AKNIERIGDH TNIAE+VH+LVAG+    +R K D SSST++NV D +
Sbjct:    1 MAADHIVKTFDEDLTQMINMIAEMGGLAESQLAEAVMALVRRDEGLAARVIDHDERQDELEEDIEAQVIRLLALRQPMALDLRTVVAALKIAAELERIGDYAKNVAKRSLTLMQTQPVGNAANTIMRMGSIAGDMIHNVIDAYLNKDIVKADEVRARDQDVDQLHTGLFRELLTYMMEDPRNITACTHLLFVAKNIERIGDHATNIAESVHYLVAGERNERERSKQDLSSSTVINVWDKS 240          
BLAST of mRNA_P-wetherbeei_contig10559.1.1 vs. uniprot
Match: A0A352KCY6_9PROT (Phosphate transport system regulatory protein PhoU n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KCY6_9PROT)

HSP 1 Score: 320 bits (821), Expect = 1.550e-107
Identity = 166/244 (68.03%), Postives = 197/244 (80.74%), Query Frame = 1
Query:   13 PEGTAHMVSEHIVKSFDDELNRLASMIAEMGGLAESQLADAISALSRRDETLASSVIVQDVRLDALETDIDAQVIRMLALRQPQALDLRAVIVALKISAELERIGDYAKNVAKRTLTLMQAAAVGTASNTIVRMGAIVGGMISNVIDAYLNADILKAEEVRARDHDVDQMHTSLFRELLTYMMEDPRNITACTHLLFIAKNIERIGDHVTNIAENVHFLVAGQIPGHDRPKSDFSSSTIVNVED 744
            P G   M  EHIVKSFD ELN L  +IA+MGGLAE QLA+AI AL RRD  LA+ VIVQD R+D LE + D Q +R+LALRQP+A+DLRAV+ +LK + ELERIGDYAKNVAKRT T++ A  VG A+ ++ RM ++V GMISNV+DAY+N D  KAE+VRARD +VDQ+HTSLFREL+TYMMEDPRNITACTHLLFIAKNIERIGDH TNIAE V FLVAG++P  DR K D SSST+++ ED
Sbjct:   29 PAGAVRMEKEHIVKSFDSELNELTHIIAQMGGLAEDQLANAIKALVRRDADLAAQVIVQDARIDELELEADDQALRLLALRQPKAVDLRAVLTSLKTATELERIGDYAKNVAKRTATVVAAPPVGGAAGSLGRMASVVQGMISNVLDAYINRDAAKAEDVRARDAEVDQLHTSLFRELVTYMMEDPRNITACTHLLFIAKNIERIGDHATNIAEYVLFLVAGKLPSDDRLKGDLSSSTLIHPED 272          
BLAST of mRNA_P-wetherbeei_contig10559.1.1 vs. uniprot
Match: A0A1E5Q8G0_9PROT (Phosphate-specific transport system accessory protein PhoU n=1 Tax=Magnetovibrio blakemorei TaxID=28181 RepID=A0A1E5Q8G0_9PROT)

HSP 1 Score: 301 bits (771), Expect = 1.570e-100
Identity = 160/234 (68.38%), Postives = 185/234 (79.06%), Query Frame = 1
Query:   31 MVSEHIVKSFDDELNRLASMIAEMGGLAESQLADAISALSRRDETLASSVIVQDVRLDALETDIDAQVIRMLALRQPQALDLRAVIVALKISAELERIGDYAKNVAKRTLTLMQAAAVGTASNTIVRMGAIVGGMISNVIDAYLNADILKAEEVRARDHDVDQMHTSLFRELLTYMMEDPRNITACTHLLFIAKNIERIGDHVTNIAENVHFLVAGQIPGHDRPKSDFSSSTIV 732
            M  EHIV SFD++L RL S+IAEMGGLAE QLADA+ ALSRRD  LA  VI  D ++D LE +ID   IR+LALRQP A DLRAV+VALK+++ LERIGDYAKNVAKRTLTL     VG A+ TI RM   V  MI NV+DAY   D+ KA++VR RD +VD MHTSLFRELLTYM+EDPRNITACTHLLF+AKN+ERIGDHVT+IAENVHFLV+G  P  +RPK+D SS TIV
Sbjct:    1 MEHEHIVSSFDEDLGRLDSIIAEMGGLAERQLADAVDALSRRDVALAKKVIESDKQIDLLEEEIDNFTIRVLALRQPMAEDLRAVVVALKMASNLERIGDYAKNVAKRTLTLSAMEPVGNATQTIQRMARQVQSMIKNVLDAYGAHDLAKADDVRMRDEEVDLMHTSLFRELLTYMLEDPRNITACTHLLFVAKNVERIGDHVTSIAENVHFLVSGDKPADERPKNDLSSQTIV 234          
BLAST of mRNA_P-wetherbeei_contig10559.1.1 vs. uniprot
Match: A0A2E5PHR1_9PROT (Phosphate-specific transport system accessory protein PhoU n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5PHR1_9PROT)

HSP 1 Score: 280 bits (715), Expect = 6.640e-92
Identity = 148/231 (64.07%), Postives = 177/231 (76.62%), Query Frame = 1
Query:   40 EHIVKSFDDELNRLASMIAEMGGLAESQLADAISALSRRDETLASSVIVQDVRLDALETDIDAQVIRMLALRQPQALDLRAVIVALKISAELERIGDYAKNVAKRTLTLMQAAAVGTASNTIVRMGAIVGGMISNVIDAYLNADILKAEEVRARDHDVDQMHTSLFRELLTYMMEDPRNITACTHLLFIAKNIERIGDHVTNIAENVHFLVAGQIPGHDRPKSDFSSSTIV 732
            EHIVKSFDDELN L + IAEMGGLAE+QLA AI AL RRD   A+ +I  D R+D LE DI+   +RMLALRQP+A DLR  + ALK + +LERIGDYAKN+AKRT+T+ +   VG A N+I RM ++V  MI NV+DAY++ D  +A +VR RD DVD  HTSLFRELLTYMMEDPRNITACTHLLFIAKN+ERIGDH TNIAE++HF+V G  P + R   D SS T+V
Sbjct:   10 EHIVKSFDDELNWLDNAIAEMGGLAEAQLAAAIDALVRRDAEKAAEIIEWDKRIDKLEEDINNFTVRMLALRQPRASDLRITVAALKSAGDLERIGDYAKNMAKRTITISKTEPVGGAVNSIARMASMVQSMIKNVLDAYVSRDWERAADVRLRDEDVDHSHTSLFRELLTYMMEDPRNITACTHLLFIAKNVERIGDHTTNIAEHIHFMVRGGEPENARINDDLSSYTVV 240          
BLAST of mRNA_P-wetherbeei_contig10559.1.1 vs. uniprot
Match: A0A1Z8R8L5_9GAMM (Phosphate-specific transport system accessory protein PhoU n=1 Tax=Gammaproteobacteria bacterium TMED30 TaxID=1986759 RepID=A0A1Z8R8L5_9GAMM)

HSP 1 Score: 274 bits (701), Expect = 8.870e-90
Identity = 135/237 (56.96%), Postives = 181/237 (76.37%), Query Frame = 1
Query:   31 MVSEHIVKSFDDELNRLASMIAEMGGLAESQLADAISALSRRDETLASSVIVQDVRLDALETDIDAQVIRMLALRQPQALDLRAVIVALKISAELERIGDYAKNVAKRTLTLMQAAAVGTASNTIVRMGAIVGGMISNVIDAYLNADILKAEEVRARDHDVDQMHTSLFRELLTYMMEDPRNITACTHLLFIAKNIERIGDHVTNIAENVHFLVAGQIPGHDRPKSDFSSSTIVNVE 741
            M  EHIVKS+DD+L+RL ++IAEMGGL E+QL++AI AL++ D+ +A  V++ D ++DALE +IDA  +++LALRQP A DLR +I ALK+S  LER+GDYAKN+AKR +T+ ++   G  ++ IVRM  IV  MI N +DAY++ D   A +VR RD DVDQ+H+S FRE LTYMMEDPR IT CTHLLF+AKN+ERIGDH+T+IAE + F V G +P  +RPK D +SSTI+  +
Sbjct:    1 MEQEHIVKSYDDDLSRLDNLIAEMGGLCEAQLSEAIEALTKSDQEIAERVVLDDKKIDALEVEIDAHAVKLLALRQPMAEDLRIIISALKVSGNLERVGDYAKNIAKRAITIAKSRNHGFNASMIVRMANIVQPMIKNALDAYISRDAELANDVRLRDEDVDQLHSSFFREQLTYMMEDPRTITTCTHLLFVAKNVERIGDHITSIAEQIMFSVDGVVPETERPKKDLTSSTIIEAK 237          
BLAST of mRNA_P-wetherbeei_contig10559.1.1 vs. uniprot
Match: A0A2A4TWD3_9PROT (Phosphate-specific transport system accessory protein PhoU n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2A4TWD3_9PROT)

HSP 1 Score: 272 bits (696), Expect = 4.310e-89
Identity = 146/237 (61.60%), Postives = 174/237 (73.42%), Query Frame = 1
Query:   31 MVSEHIVKSFDDELNRLASMIAEMGGLAESQLADAISALSRRDETLASSVIVQDVRLDALETDIDAQVIRMLALRQPQALDLRAVIVALKISAELERIGDYAKNVAKRTLTLMQAAAVGTASNTIVRMGAIVGGMISNVIDAYLNADILKAEEVRARDHDVDQMHTSLFRELLTYMMEDPRNITACTHLLFIAKNIERIGDHVTNIAENVHFLVAGQIPGHDRPKSDFSSSTIVNVE 741
            M  +HIVKSFDD+L+RL S+IAEMGGL E QL+D ++AL +RD  LA  VI  D R+D LET++D   I +LALRQP A DLRAVI  LK+SA LERIGDYAKN+AKR L L              RM A+V  M+ N +DAY   DI KA+ VR RD DVD+MHTSLFRELLTYMMEDP +ITA THLLFI+KN+ERIGDHVT+IAE VHFLVAG++P  +RPK D SS T +  +
Sbjct:    2 MDHDHIVKSFDDDLSRLDSIIAEMGGLVERQLSDVMTALIKRDVKLAQKVIDDDKRVDELETELDQHTITVLALRQPMADDLRAVIAVLKMSANLERIGDYAKNIAKRVLILSNXXXXXXXXXXXGRMTALVQEMVKNALDAYGTLDIQKADNVRLRDEDVDRMHTSLFRELLTYMMEDPHHITASTHLLFISKNVERIGDHVTSIAEYVHFLVAGELPREERPKCDLSSQTTLEED 238          
BLAST of mRNA_P-wetherbeei_contig10559.1.1 vs. uniprot
Match: A0A2S6T620_9PROT (Phosphate-specific transport system accessory protein PhoU n=1 Tax=Alphaproteobacteria bacterium MarineAlpha4_Bin2 TaxID=2013075 RepID=A0A2S6T620_9PROT)

HSP 1 Score: 273 bits (697), Expect = 4.690e-89
Identity = 141/235 (60.00%), Postives = 178/235 (75.74%), Query Frame = 1
Query:   40 EHIVKSFDDELNRLASMIAEMGGLAESQLADAISALSRRDETLASSVIVQDVRLDALETDIDAQVIRMLALRQPQALDLRAVIVALKISAELERIGDYAKNVAKRTLTLMQAAAVGTASNTIVRMGAIVGGMISNVIDAYLNADILKAEEVRARDHDVDQMHTSLFRELLTYMMEDPRNITACTHLLFIAKNIERIGDHVTNIAENVHFLVAGQIPGHDRPKSDFSSSTIVNVED 744
            EHIV SFD +L RL +MIAEMGGLAESQLA +I AL +RD   A  ++  D R+D LE +I    ++++ALRQP A DLR VI A+K+S+ LERIGDYAKN++KRT+ L ++  +G+A NT+ RMG +V GMI NV+DAY+  D   A +VR RD +VD +HTSLFRELLTYMMEDPR+IT C HLLF+AKNIERIGDH T IAE V+F+V G++P  DRPK D SS+T V  E+
Sbjct:    7 EHIVSSFDADLGRLDNMIAEMGGLAESQLAGSIEALRKRDIAAAEKIVPADKRIDDLEDEIYEFTVKLIALRQPMAEDLRIVISAIKVSSVLERIGDYAKNISKRTIVLEKSPVMGSAVNTVSRMGNLVQGMIKNVLDAYIARDADMANDVRDRDREVDLLHTSLFRELLTYMMEDPRHITPCAHLLFVAKNIERIGDHATGIAEQVYFMVHGEMPHDDRPKGDSSSTTAVTPEE 241          
BLAST of mRNA_P-wetherbeei_contig10559.1.1 vs. uniprot
Match: A0A7V2AJU9_9PROT (Phosphate-specific transport system accessory protein PhoU n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2AJU9_9PROT)

HSP 1 Score: 271 bits (692), Expect = 1.930e-88
Identity = 141/236 (59.75%), Postives = 174/236 (73.73%), Query Frame = 1
Query:   31 MVSEHIVKSFDDELNRLASMIAEMGGLAESQLADAISALSRRDETLASSVIVQDVRLDALETDIDAQVIRMLALRQPQALDLRAVIVALKISAELERIGDYAKNVAKRTLTLMQAAAVGTASNTIVRMGAIVGGMISNVIDAYLNADILKAEEVRARDHDVDQMHTSLFRELLTYMMEDPRNITACTHLLFIAKNIERIGDHVTNIAENVHFLVAGQIPGHDRPKSDFSSSTIVNV 738
            M  EHIV SFDDEL  + + +AEMGG+AE+QLA AI AL RRD  LA  VI +D  +D LE  +D   IR++ALRQP A DLR VI ALK SA +ERIGDY+KN+AKR +TL Q   VG    TI RM  +   ++S+V+DAY+  DI  A++VR RD +VD++HT LFRE+LT+M+E P NITACTHLLFIAKNIERIGDH TNIAE VHF+V+GQ+P  +RPK D +S TIV  
Sbjct:    1 MEQEHIVTSFDDELKAIDTTLAEMGGMAEAQLAKAIDALVRRDSDLARQVIKEDKLIDDLEAALDHNAIRLIALRQPMAEDLRMVITALKTSANIERIGDYSKNIAKRAITLAQTEPVGDTVKTIKRMSILAQELVSSVLDAYVKRDIRAADDVRRRDAEVDRIHTGLFREMLTHMIETPHNITACTHLLFIAKNIERIGDHATNIAEYVHFMVSGQMPEDERPKDDETSQTIVTA 236          
BLAST of mRNA_P-wetherbeei_contig10559.1.1 vs. uniprot
Match: A0A2D9F7S4_9PROT (Phosphate-specific transport system accessory protein PhoU n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D9F7S4_9PROT)

HSP 1 Score: 269 bits (688), Expect = 7.060e-88
Identity = 144/237 (60.76%), Postives = 178/237 (75.11%), Query Frame = 1
Query:   31 MVSEHIVKSFDDELNRLASMIAEMGGLAESQLADAISALSRRDETLASSVIVQDVRLDALETDIDAQVIRMLALRQPQALDLRAVIVALKISAELERIGDYAKNVAKRTLTLMQAAAVGTASNTIVRMGAIVGGMISNVIDAYLNADILKAEEVRARDHDVDQMHTSLFRELLTYMMEDPRNITACTHLLFIAKNIERIGDHVTNIAENVHFLVAGQIPGHDRPKSDFSSSTIVNVE 741
            M +EHIVKSFD++L +L + IAEMGGLAE QLADAI AL +RD  LA  VI  D ++D LE D+D      LALRQP A DLR  I AL+ ++ +ERIGDYAKN+AKR++ L Q+  +G A + I RM  +V GMI +V+DAY+  D+ KAE VRARD D D +HTSLFRE+LTYMMEDPR IT+CTHLLF+AKN+ERIGDH TNIAENV++LV G+ P  +R KSD SS T+V  E
Sbjct:    1 MNTEHIVKSFDEDLKKLDNTIAEMGGLAEVQLADAIEALIKRDTELADRVIAGDKKIDMLEADMDTHATTTLALRQPMADDLRVTITALRTASLIERIGDYAKNIAKRSVVLSQSPPLGPAKS-INRMATLVQGMIKDVLDAYVARDVDKAEAVRARDADADLLHTSLFREILTYMMEDPRTITSCTHLLFVAKNLERIGDHATNIAENVYYLVNGEPPVDEREKSDASSFTVVEHE 236          
BLAST of mRNA_P-wetherbeei_contig10559.1.1 vs. uniprot
Match: A0A1C3RCD8_9PROT (Phosphate-specific transport system accessory protein PhoU n=2 Tax=Terasakiella TaxID=196080 RepID=A0A1C3RCD8_9PROT)

HSP 1 Score: 268 bits (686), Expect = 1.370e-87
Identity = 144/235 (61.28%), Postives = 178/235 (75.74%), Query Frame = 1
Query:   37 SEHIVKSFDDELNRLASMIAEMGGLAESQLADAISALSRRDETLASSVIVQDVRLDALETDIDAQVIRMLALRQPQALDLRAVIVALKISAELERIGDYAKNVAKRTLTLMQAAAVGTASNTIVRMGAIVGGMISNVIDAYLNADILKAEEVRARDHDVDQMHTSLFRELLTYMMEDPRNITACTHLLFIAKNIERIGDHVTNIAENVHFLVAGQIPGHDRPKSDFSSSTIVNVE 741
            ++H VKS+D+EL  L + IA MGGL+E+ L  A  AL +RD TLA +VI  D+++D LE +I+ +V R+LALRQP A DLR VI ALK S++LERIGD +KN+AKRT+TL  AA +G A +TI RM ++V  M+ NV+DAYL  D  KA ++RA+D  VDQ+HTSLFRELLTYMMEDPRNIT CTHLLFIAKN+ER GDH TNIAENVHFLV G  P  DRPK D +S T +  E
Sbjct:    4 TDHTVKSYDNELTHLDNAIARMGGLSEALLGRASEALVKRDTTLAGNVIHDDLKIDELEMEINTEVTRILALRQPMADDLRMVISALKTSSDLERIGDLSKNIAKRTITLSSAAPIG-AVHTIARMASLVQSMVHNVLDAYLERDERKALDIRAQDEVVDQLHTSLFRELLTYMMEDPRNITPCTHLLFIAKNVERAGDHATNIAENVHFLVTGVHPEDDRPKDDETSFTGLEEE 237          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10559.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TV89_9PROT6.670e-11572.50Phosphate-specific transport system accessory prot... [more]
A0A352KCY6_9PROT1.550e-10768.03Phosphate transport system regulatory protein PhoU... [more]
A0A1E5Q8G0_9PROT1.570e-10068.38Phosphate-specific transport system accessory prot... [more]
A0A2E5PHR1_9PROT6.640e-9264.07Phosphate-specific transport system accessory prot... [more]
A0A1Z8R8L5_9GAMM8.870e-9056.96Phosphate-specific transport system accessory prot... [more]
A0A2A4TWD3_9PROT4.310e-8961.60Phosphate-specific transport system accessory prot... [more]
A0A2S6T620_9PROT4.690e-8960.00Phosphate-specific transport system accessory prot... [more]
A0A7V2AJU9_9PROT1.930e-8859.75Phosphate-specific transport system accessory prot... [more]
A0A2D9F7S4_9PROT7.060e-8860.76Phosphate-specific transport system accessory prot... [more]
A0A1C3RCD8_9PROT1.370e-8761.28Phosphate-specific transport system accessory prot... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10559contigP-wetherbeei_contig10559:385..1140 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1123355.JHYO01000005_gene840
Preferred namephoU
PFAMsPhoU
Model size756
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02039
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186
Exons1
Evalue2.9e-86
EggNOG OGsCOG0704@1|root,COG0704@2|Bacteria,1MUMI@1224|Proteobacteria,2TQMN@28211|Alphaproteobacteria,36XZD@31993|Methylocystaceae
DescriptionPhoU domain
Cds size756
COG categoryP
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185875.0669048-CDS-P-wetherbeei_contig10559:384..11401683185875.0669048-CDS-P-wetherbeei_contig10559:384..1140Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10559 385..1140 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10559.1.1prot_P-wetherbeei_contig10559.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10559 385..1140 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10559.1.1

>prot_P-wetherbeei_contig10559.1.1 ID=prot_P-wetherbeei_contig10559.1.1|Name=mRNA_P-wetherbeei_contig10559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp
MAHKPEGTAHMVSEHIVKSFDDELNRLASMIAEMGGLAESQLADAISALS
RRDETLASSVIVQDVRLDALETDIDAQVIRMLALRQPQALDLRAVIVALK
ISAELERIGDYAKNVAKRTLTLMQAAAVGTASNTIVRMGAIVGGMISNVI
DAYLNADILKAEEVRARDHDVDQMHTSLFRELLTYMMEDPRNITACTHLL
FIAKNIERIGDHVTNIAENVHFLVAGQIPGHDRPKSDFSSSTIVNVEDNA
P*
back to top

mRNA from alignment at P-wetherbeei_contig10559:385..1140+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10559.1.1 ID=mRNA_P-wetherbeei_contig10559.1.1|Name=mRNA_P-wetherbeei_contig10559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig10559:385..1140+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCACACAAACCGGAAGGAACTGCACACATGGTTTCTGAGCATATCGT CAAGTCATTCGATGACGAGCTTAACAGGCTGGCCAGCATGATTGCGGAGA TGGGCGGTCTTGCGGAAAGCCAGCTTGCCGACGCCATTTCCGCGCTGTCC AGGCGCGACGAGACACTGGCGTCCAGCGTCATTGTCCAGGATGTGCGCCT TGATGCGCTGGAAACAGATATTGACGCGCAGGTCATACGCATGCTGGCGT TGCGCCAGCCCCAGGCGCTGGATCTGCGCGCTGTTATAGTGGCGCTGAAA ATTTCCGCCGAGCTTGAACGCATCGGCGACTATGCCAAGAATGTCGCCAA GCGCACACTTACCCTTATGCAGGCGGCTGCGGTAGGGACTGCATCCAATA CAATTGTCCGCATGGGAGCGATTGTCGGCGGCATGATCAGCAATGTCATT GACGCCTATCTGAACGCCGATATTCTCAAGGCCGAAGAGGTCAGGGCGCG CGATCATGACGTGGATCAGATGCACACCAGCCTGTTCCGGGAATTGCTGA CCTATATGATGGAAGATCCCCGCAACATCACCGCCTGCACGCATTTATTG TTCATTGCCAAGAACATCGAGCGCATCGGCGATCATGTCACCAATATTGC CGAGAATGTGCATTTTCTGGTCGCGGGTCAAATTCCCGGGCATGACCGGC CAAAAAGCGACTTCTCAAGCTCAACCATTGTCAACGTGGAGGATAACGCA CCATGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig10559:385..1140+

>mRNA_P-wetherbeei_contig10559.1.1 ID=mRNA_P-wetherbeei_contig10559.1.1|Name=mRNA_P-wetherbeei_contig10559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig10559:385..1140+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCACACAAACCGGAAGGAACTGCACACATGGTTTCTGAGCATATCGT
CAAGTCATTCGATGACGAGCTTAACAGGCTGGCCAGCATGATTGCGGAGA
TGGGCGGTCTTGCGGAAAGCCAGCTTGCCGACGCCATTTCCGCGCTGTCC
AGGCGCGACGAGACACTGGCGTCCAGCGTCATTGTCCAGGATGTGCGCCT
TGATGCGCTGGAAACAGATATTGACGCGCAGGTCATACGCATGCTGGCGT
TGCGCCAGCCCCAGGCGCTGGATCTGCGCGCTGTTATAGTGGCGCTGAAA
ATTTCCGCCGAGCTTGAACGCATCGGCGACTATGCCAAGAATGTCGCCAA
GCGCACACTTACCCTTATGCAGGCGGCTGCGGTAGGGACTGCATCCAATA
CAATTGTCCGCATGGGAGCGATTGTCGGCGGCATGATCAGCAATGTCATT
GACGCCTATCTGAACGCCGATATTCTCAAGGCCGAAGAGGTCAGGGCGCG
CGATCATGACGTGGATCAGATGCACACCAGCCTGTTCCGGGAATTGCTGA
CCTATATGATGGAAGATCCCCGCAACATCACCGCCTGCACGCATTTATTG
TTCATTGCCAAGAACATCGAGCGCATCGGCGATCATGTCACCAATATTGC
CGAGAATGTGCATTTTCTGGTCGCGGGTCAAATTCCCGGGCATGACCGGC
CAAAAAGCGACTTCTCAAGCTCAACCATTGTCAACGTGGAGGATAACGCA
CCATGA
back to top