mRNA_P-wetherbeei_contig1055.8.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1055.8.1
Unique NamemRNA_P-wetherbeei_contig1055.8.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig1055.8.1 vs. uniprot
Match: D7FGT6_ECTSI (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT6_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 4.070e-45
Identity = 88/144 (61.11%), Postives = 105/144 (72.92%), Query Frame = 1 
Query:   19 GRVVNPTECQVVELLVWALHRSGVCGREIGVITPFRAQLRLLEATLRRRFPLVEVNTIDKYQGRDKHIVIVSFVRSNAAGLVGELLRDWRRLNVALSRAKAKLLLVGSAGTLRNAAVLGAMVAALEKRRWVYRLPLGATAMYGR 450
            G +VN  EC VV LL W L  +G     +GVI+P+R+Q++LL+A L+  FP +EVNTIDKYQGRDK +++VSFVRSNA G VG LLRDWRRLNVALSRAK KLLLVGS  TL + AVL ++   L  R WVY LP GA  MY R
Sbjct:  415 GTLVNAVECDVVRLLAWGLGVAGFDLGGVGVISPYRSQVQLLQAELKPSFPALEVNTIDKYQGRDKKVIVVSFVRSNAEGTVGHLLRDWRRLNVALSRAKHKLLLVGSLRTLSSCAVLNSLAGILRDRGWVYSLPPGAHRMYPR 558
[Close]
BLAST of mRNA_P-wetherbeei_contig1055.8.1 vs. uniprot
Match: A0A6H5KHP8_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP8_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 1.820e-44
Identity = 88/144 (61.11%), Postives = 104/144 (72.22%), Query Frame = 1 
Query:   19 GRVVNPTECQVVELLVWALHRSGVCGREIGVITPFRAQLRLLEATLRRRFPLVEVNTIDKYQGRDKHIVIVSFVRSNAAGLVGELLRDWRRLNVALSRAKAKLLLVGSAGTLRNAAVLGAMVAALEKRRWVYRLPLGATAMYGR 450
            G +VN  EC VV LL W L  +G     +GVI+P+R+Q++LL A L+  FP +EVNTIDKYQGRDK +++VSFVRSNA G VG LLRDWRRLNVALSRAK KLLLVGS  TL + AVL ++   L  R WVY LP GA  MY R
Sbjct: 1927 GTLVNAVECDVVRLLAWGLDVAGFDLGGVGVISPYRSQVQLLRAELKPSFPALEVNTIDKYQGRDKKVIVVSFVRSNAEGTVGHLLRDWRRLNVALSRAKHKLLLVGSLRTLSSCAVLNSLAGILRDRGWVYSLPSGAHRMYPR 2070
[Close]
BLAST of mRNA_P-wetherbeei_contig1055.8.1 vs. uniprot
Match: A0A5N6G1W2_PETAA (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Petromyces alliaceus TaxID=209559 RepID=A0A5N6G1W2_PETAA)

HSP 1 Score: 141 bits (356), Expect = 4.410e-37
Identity = 76/140 (54.29%), Postives = 98/140 (70.00%), Query Frame = 1 
Query:   16 GGRVVNPTECQVVELLVWALHRSGVCGREIGVITPFRAQLRLLEATLRRRFPLVEVNTIDKYQGRDKHIVIVSFVRSNAAGLVGELLRDWRRLNVALSRAKAKLLLVGSAGTLRNA-AVLGAMVAALEKRRWVYRLPLGA 432
            G R+VNPTE  +   LV A    G+  R IGVIT +R+QL LL+  LRR  P +E++T DK+QGRDK +VI+S VRSN+   VG+LLRDWRR+NVA +RA+ KLL+VGS  TLR+   +L   V  +E+R WVY LP GA
Sbjct:   89 GSRIVNPTEATLCAQLVEAFISCGIPARNIGVITFYRSQLSLLKQNLRRHLPALEMHTADKFQGRDKEVVILSCVRSNSENHVGDLLRDWRRVNVAFTRARTKLLIVGSKSTLRDGNELLRKYVQLVEERGWVYNLPKGA 228
[Close]
BLAST of mRNA_P-wetherbeei_contig1055.8.1 vs. uniprot
Match: UPI000DBD65D6 (hypothetical protein n=1 Tax=Aspergillus japonicus CBS 114.51 TaxID=1448312 RepID=UPI000DBD65D6)

HSP 1 Score: 140 bits (352), Expect = 7.040e-36
Identity = 76/141 (53.90%), Postives = 99/141 (70.21%), Query Frame = 1 
Query:   13 SGGRVVNPTECQVVELLVWALHRSGVCGREIGVITPFRAQLRLLEATLRRRFPLVEVNTIDKYQGRDKHIVIVSFVRSNAAGLVGELLRDWRRLNVALSRAKAKLLLVGSAGTLRNA-AVLGAMVAALEKRRWVYRLPLGA 432
            +G R+VNPTE ++   LV A    G+  R IGVIT +R+QL LL+  L R  P +E++T DK+QGRDK IVI+S VRSNA   VG+LLRDWRR+NVAL+RA+ KLL+VGS  TLR+   +LG  V  ++ R W+Y LP  A
Sbjct:  145 NGSRIVNPTEAKLCTQLVEAFISCGISARSIGVITFYRSQLSLLKLNLSRHLPDLEMHTADKFQGRDKEIVILSCVRSNADNHVGDLLRDWRRVNVALTRARTKLLVVGSKSTLRDGNELLGKYVKLVQDRGWIYDLPKNA 285
[Close]
BLAST of mRNA_P-wetherbeei_contig1055.8.1 vs. uniprot
Match: A0A0U5HEK5_ASPCI (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Aspergillus calidoustus TaxID=454130 RepID=A0A0U5HEK5_ASPCI)

HSP 1 Score: 144 bits (363), Expect = 1.190e-35
Identity = 77/141 (54.61%), Postives = 99/141 (70.21%), Query Frame = 1 
Query:   13 SGGRVVNPTECQVVELLVWALHRSGVCGREIGVITPFRAQLRLLEATLRRRFPLVEVNTIDKYQGRDKHIVIVSFVRSNAAGLVGELLRDWRRLNVALSRAKAKLLLVGSAGTLRNA-AVLGAMVAALEKRRWVYRLPLGA 432
            +G R+VNPTE  +   LV AL   G+  R IGVIT +R+QL LL+  LR R P +E++T DK+QGRDK I+I+S VRSN    VG+LL DWRR+NVA +RA+ KLL+VGS GTLRN   +LG  V  +E+R W+Y LP  A
Sbjct: 1427 NGSRIVNPTEANLCTQLVEALISCGISARSIGVITFYRSQLSLLKQNLRHRVPDLEMHTADKFQGRDKEIIILSCVRSNEENYVGDLLSDWRRVNVAFTRARTKLLVVGSKGTLRNGNELLGKYVKLVEQRGWIYDLPKNA 1567
[Close]
BLAST of mRNA_P-wetherbeei_contig1055.8.1 vs. uniprot
Match: A1CIE5_ASPCL (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) TaxID=344612 RepID=A1CIE5_ASPCL)

HSP 1 Score: 143 bits (361), Expect = 2.220e-35
Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 1 
Query:   13 SGGRVVNPTECQVVELLVWALHRSGVCGREIGVITPFRAQLRLLEATLRRRFPLVEVNTIDKYQGRDKHIVIVSFVRSNAAGLVGELLRDWRRLNVALSRAKAKLLLVGSAGTLRNA-AVLGAMVAALEKRRWVYRLPLGA 432
            +G R+VN  E  +   LV AL   G+  R+IGVIT +R+QL LL+ TLRR  P +E++T DK+QGRDK IVI+S VRSNA   VG+LLRDWRR+NVA +RA+ KLL++GS  TLRN   +LG  +  +EK+RWVY LP  A
Sbjct: 1435 NGARIVNSAESTLCSHLVEALISCGIPARKIGVITFYRSQLSLLKQTLRRYLPELEMHTADKFQGRDKEIVILSCVRSNADNNVGDLLRDWRRINVAFTRARTKLLVIGSKSTLRNGNELLGKYINLMEKQRWVYDLPKDA 1575
[Close]
BLAST of mRNA_P-wetherbeei_contig1055.8.1 vs. uniprot
Match: A0A5N7A3F8_9EURO (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Aspergillus caelatus TaxID=61420 RepID=A0A5N7A3F8_9EURO)

HSP 1 Score: 137 bits (344), Expect = 2.790e-35
Identity = 73/142 (51.41%), Postives = 98/142 (69.01%), Query Frame = 1 
Query:   10 NSGGRVVNPTECQVVELLVWALHRSGVCGREIGVITPFRAQLRLLEATLRRRFPLVEVNTIDKYQGRDKHIVIVSFVRSNAAGLVGELLRDWRRLNVALSRAKAKLLLVGSAGTLRNA-AVLGAMVAALEKRRWVYRLPLGA 432
            + G R+VNPTE  +   LV A    G+  R IGVIT +R+QL LL+  L    P +E++T DK+QGRDK +V++S VRSN+   VG+LLRDWRR+NVA +RA+ KLL+VGS GTLR    +LG  V  +E++ W+Y LP GA
Sbjct:   91 SQGSRIVNPTEAILCAQLVEAFISCGIPARSIGVITFYRSQLSLLKQNLHHHLPDLEMHTADKFQGRDKDVVVLSCVRSNSDNHVGDLLRDWRRVNVAFTRARTKLLVVGSKGTLRGGNELLGKYVKLVEEQGWIYDLPKGA 232
[Close]
BLAST of mRNA_P-wetherbeei_contig1055.8.1 vs. uniprot
Match: A0A8H6ABS0_ASPBU (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Aspergillus burnettii TaxID=2508778 RepID=A0A8H6ABS0_ASPBU)

HSP 1 Score: 141 bits (356), Expect = 1.030e-34
Identity = 76/140 (54.29%), Postives = 98/140 (70.00%), Query Frame = 1 
Query:   16 GGRVVNPTECQVVELLVWALHRSGVCGREIGVITPFRAQLRLLEATLRRRFPLVEVNTIDKYQGRDKHIVIVSFVRSNAAGLVGELLRDWRRLNVALSRAKAKLLLVGSAGTLRNA-AVLGAMVAALEKRRWVYRLPLGA 432
            G R+VNPTE  +   LV A    G+  R IGVIT +R+QL LL+  LRR  P +E++T DK+QGRDK +VI+S VRSN+   VG+LLRDWRR+NVA +RA+ KLL+VGS  TLR+   +L   V  +E+R WVY LP GA
Sbjct: 1442 GSRIVNPTEATLCAQLVEAFISCGIPARNIGVITFYRSQLSLLKQNLRRHLPALEMHTADKFQGRDKEVVILSCVRSNSENHVGDLLRDWRRVNVAFTRARTKLLIVGSKSTLRDGNELLRKYVQLVEERGWVYNLPKGA 1581
[Close]
BLAST of mRNA_P-wetherbeei_contig1055.8.1 vs. uniprot
Match: A1CWB5_NEOFI (DNA replication ATP-dependent helicase/nuclease n=15 Tax=Aspergillus TaxID=5052 RepID=A1CWB5_NEOFI)

HSP 1 Score: 141 bits (355), Expect = 1.400e-34
Identity = 76/155 (49.03%), Postives = 105/155 (67.74%), Query Frame = 1 
Query:   13 SGGRVVNPTECQVVELLVWALHRSGVCGREIGVITPFRAQLRLLEATLRRRFPLVEVNTIDKYQGRDKHIVIVSFVRSNAAGLVGELLRDWRRLNVALSRAKAKLLLVGSAGTLRNAA-VLGAMVAALEKRRWVYRLPLGATAMYGREWQLSQTP 474
            +G R+VNPTE  +   LV +L   G+  R IGVIT +R+QL LL+  LRR  P +E++T DK+QGRDK +V++S VRSN    VG+LLRDWRR+NVA +RA+ KLL++GS  TLR+   +L   ++ +E+RRWVY LP G    +     +S TP
Sbjct: 1380 NGARIVNPTESSICAQLVESLVSCGIPARNIGVITFYRSQLSLLKQNLRRYLPELEMHTADKFQGRDKEVVLLSCVRSNTDNNVGDLLRDWRRINVAFTRARTKLLVIGSKSTLRDGNDLLRKYISMVEERRWVYDLPKGVLETHIFNCDVSFTP 1534
[Close]
BLAST of mRNA_P-wetherbeei_contig1055.8.1 vs. uniprot
Match: UPI001E8EE637 (DNA replication endonuclease-helicase Dna2 n=1 Tax=Aspergillus melleus TaxID=138277 RepID=UPI001E8EE637)

HSP 1 Score: 140 bits (354), Expect = 1.910e-34
Identity = 77/141 (54.61%), Postives = 100/141 (70.92%), Query Frame = 1 
Query:   13 SGGRVVNPTECQVVELLVWALHRSGVCGREIGVITPFRAQLRLLEATLRRRFPLVEVNTIDKYQGRDKHIVIVSFVRSNAAGLVGELLRDWRRLNVALSRAKAKLLLVGSAGTLRNA-AVLGAMVAALEKRRWVYRLPLGA 432
            +G R+VNPTE  +   LV A   SG+  R IGVIT +R+QL LL+  LRR  P +E++T DK+QGRDK +VI+S VRSNA   VG+LLRDWRR+NVA +RA+ KLL+VGS  TLR+   +LG  V  +E++ WVY LP  A
Sbjct: 1436 TGSRIVNPTEATLCAQLVEAFISSGIPARSIGVITFYRSQLSLLKQNLRRHLPDLEMHTADKFQGRDKEVVILSCVRSNADKHVGDLLRDWRRVNVAFTRARTKLLVVGSKSTLRDGNELLGKYVKLMEEQGWVYDLPRDA 1576
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1055.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGT6_ECTSI4.070e-4561.11DNA replication ATP-dependent helicase/nuclease n=... [more]
A0A6H5KHP8_9PHAE1.820e-4461.11DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A5N6G1W2_PETAA4.410e-3754.29DNA replication ATP-dependent helicase/nuclease n=... [more]
UPI000DBD65D67.040e-3653.90hypothetical protein n=1 Tax=Aspergillus japonicus... [more]
A0A0U5HEK5_ASPCI1.190e-3554.61DNA replication ATP-dependent helicase/nuclease n=... [more]
A1CIE5_ASPCL2.220e-3555.32DNA replication ATP-dependent helicase/nuclease n=... [more]
A0A5N7A3F8_9EURO2.790e-3551.41DNA replication ATP-dependent helicase/nuclease n=... [more]
A0A8H6ABS0_ASPBU1.030e-3454.29DNA replication ATP-dependent helicase/nuclease n=... [more]
A1CWB5_NEOFI1.400e-3449.03DNA replication ATP-dependent helicase/nuclease n=... [more]
UPI001E8EE6371.910e-3454.61DNA replication endonuclease-helicase Dna2 n=1 Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1055contigP-wetherbeei_contig1055:6930..7663 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FGT6
Preferred nameDNA2
PFAMsAAA_11,AAA_12,Cas_Cas4,Dna2
Model size734
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC03462
KEGG koko:K10742,ko:K15376
KEGG ReactionR09726,R09735
KEGG Pathwayko00790,ko01100,ko03030,ko04727,map00790,map01100,map03030,map04727
Hectar predicted targeting categoryother localisation
GOsGO:0000002,GO:0000003,GO:0000014,GO:0000075,GO:0000076,GO:0000166,GO:0000228,GO:0000278,GO:0000706,GO:0000723,GO:0000729,GO:0000733,GO:0000781,GO:0000784,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006264,GO:0006271,GO:0006273,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007005,GO:0007049,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009295,GO:0009607,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010556,GO:0010557,GO:0010604,GO:0016043,GO:0016070,GO:0016233,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016888,GO:0016890,GO:0016893,GO:0016895,GO:0017076,GO:0017108,GO:0017111,GO:0019219,GO:0019222,GO:0019439,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0022402,GO:0022414,GO:0022607,GO:0022616,GO:0030554,GO:0031297,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031570,GO:0031860,GO:0031974,GO:0031981,GO:0032042,GO:0032200,GO:0032201,GO:0032392,GO:0032502,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0033260,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0035312,GO:0035639,GO:0035861,GO:0036094,GO:0042592,GO:0042623,GO:0042645,GO:0043137,GO:0043139,GO:0043142,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043504,GO:0043596,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0044806,GO:0045005,GO:0045145,GO:0045740,GO:0045786,GO:0045935,GO:0046483,GO:0046700,GO:0048256,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051276,GO:0051321,GO:0051716,GO:0051726,GO:0060249,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0070035,GO:0071103,GO:0071216,GO:0071495,GO:0071704,GO:0071840,GO:0071932,GO:0072396,GO:0072402,GO:0072423,GO:0072429,GO:0080090,GO:0090304,GO:0090305,GO:0090656,GO:0090734,GO:0090737,GO:0097159,GO:0097367,GO:0098687,GO:0140097,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901576,GO:1902969,GO:1902990,GO:1903046,GO:1903047,GO:1903461,GO:1903469,GO:1990601,GO:2000112
Exons1
Evalue8.89e-47
EggNOG OGsCOG1112@1|root,KOG1805@2759|Eukaryota
EC2.10.1.1,2.7.7.75,3.6.4.12
Descriptionsingle-stranded DNA-dependent ATPase activity
Cds size558
COG categoryL
BRITEko00000,ko00001,ko01000,ko03032
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185874.7759612-UTR-P-wetherbeei_contig1055:6929..71051683185874.7759612-UTR-P-wetherbeei_contig1055:6929..7105Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1055 6930..7105 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185874.7877321-CDS-P-wetherbeei_contig1055:7105..76631683185874.7877321-CDS-P-wetherbeei_contig1055:7105..7663Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1055 7106..7663 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1055.8.1prot_P-wetherbeei_contig1055.8.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1055 7106..7663 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1055.8.1

>prot_P-wetherbeei_contig1055.8.1 ID=prot_P-wetherbeei_contig1055.8.1|Name=mRNA_P-wetherbeei_contig1055.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=186bp
GGGNSGGRVVNPTECQVVELLVWALHRSGVCGREIGVITPFRAQLRLLEA
TLRRRFPLVEVNTIDKYQGRDKHIVIVSFVRSNAAGLVGELLRDWRRLNV
ALSRAKAKLLLVGSAGTLRNAAVLGAMVAALEKRRWVYRLPLGATAMYGR
EWQLSQTPLSSQQPSQQQQQQQHEREQQMVQLPGA*
back to top

mRNA from alignment at P-wetherbeei_contig1055:6930..7663-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1055.8.1 ID=mRNA_P-wetherbeei_contig1055.8.1|Name=mRNA_P-wetherbeei_contig1055.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=734bp|location=Sequence derived from alignment at P-wetherbeei_contig1055:6930..7663- (Phaeothamnion wetherbeei SAG_119_79)
GGGGGCGGCAACAGCGGCGGTCGGGTGGTGAACCCGACCGAATGCCAAGT
GGTCGAACTGCTTGTCTGGGCCCTGCACCGGAGCGGCGTCTGCGGCCGCG
AGATCGGCGTCATCACCCCGTTCCGCGCGCAGCTGCGGCTGCTCGAGGCA
ACACTTCGGCGGCGCTTCCCGCTGGTCGAAGTCAACACCATCGACAAGTA
CCAGGGCCGTGACAAGCACATCGTCATCGTATCGTTCGTGCGCAGCAACG
CCGCCGGGCTGGTGGGGGAGCTGCTGCGGGACTGGCGGCGACTCAACGTG
GCGCTGTCGCGGGCCAAGGCCAAGCTGCTGCTGGTGGGCTCGGCAGGGAC
GCTGCGCAACGCCGCGGTGCTCGGGGCCATGGTGGCTGCGTTGGAGAAGC
GGCGGTGGGTGTACCGCCTTCCGCTTGGGGCGACGGCCATGTATGGGCGC
GAATGGCAGCTCAGCCAGACGCCGTTATCGTCGCAGCAACCATCGCAGCA
GCAGCAGCAGCAGCAGCATGAGCGCGAGCAACAGATGGTGCAGCTGCCGG
GGGCATAGCTTGGGGTAGGGCTTGCTCTTGACCTGCCAGTTATCGCTCCT
TAGATTTTCGCTTGCAGACTAGCGGGTAGGGAGCGAGCGAGCGAGTGGCT
TGAAGGGATCCATTCGAGAGGTGCGTTGCGAGAGATGTTGGCTCGGAGGC
CACTGAAGACTGCGGAAAGAGATTCTGCTTGCAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1055:6930..7663-

>mRNA_P-wetherbeei_contig1055.8.1 ID=mRNA_P-wetherbeei_contig1055.8.1|Name=mRNA_P-wetherbeei_contig1055.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=558bp|location=Sequence derived from alignment at P-wetherbeei_contig1055:6930..7663- (Phaeothamnion wetherbeei SAG_119_79)
GGGGGCGGCAACAGCGGCGGTCGGGTGGTGAACCCGACCGAATGCCAAGT
GGTCGAACTGCTTGTCTGGGCCCTGCACCGGAGCGGCGTCTGCGGCCGCG
AGATCGGCGTCATCACCCCGTTCCGCGCGCAGCTGCGGCTGCTCGAGGCA
ACACTTCGGCGGCGCTTCCCGCTGGTCGAAGTCAACACCATCGACAAGTA
CCAGGGCCGTGACAAGCACATCGTCATCGTATCGTTCGTGCGCAGCAACG
CCGCCGGGCTGGTGGGGGAGCTGCTGCGGGACTGGCGGCGACTCAACGTG
GCGCTGTCGCGGGCCAAGGCCAAGCTGCTGCTGGTGGGCTCGGCAGGGAC
GCTGCGCAACGCCGCGGTGCTCGGGGCCATGGTGGCTGCGTTGGAGAAGC
GGCGGTGGGTGTACCGCCTTCCGCTTGGGGCGACGGCCATGTATGGGCGC
GAATGGCAGCTCAGCCAGACGCCGTTATCGTCGCAGCAACCATCGCAGCA
GCAGCAGCAGCAGCAGCATGAGCGCGAGCAACAGATGGTGCAGCTGCCGG
GGGCATAG
back to top