mRNA_P-wetherbeei_contig10540.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10540.1.1 vs. uniprot
Match: D8LT51_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT51_ECTSI) HSP 1 Score: 142 bits (358), Expect = 2.100e-41 Identity = 68/98 (69.39%), Postives = 79/98 (80.61%), Query Frame = 1 Query: 1 MSTRKG-GET-SRKPKHQNEFAFRHNPKSKKTLKILAMPNEGLCRRCHAKVEWRKKYRKYKPLKNPASCNECRQKTVRAAYHTKCGPCAKAKRVCPGC 288 MSTRKG G T +RKPKHQN FAFRHNPKS+KT KILA N GLC CH KVEWRK+YRKY+PL+ PA+CN+C +KT+ AAYH C PCA+ +RVCP C Sbjct: 1 MSTRKGAGATRTRKPKHQNTFAFRHNPKSQKTAKILASVNAGLCASCHDKVEWRKRYRKYRPLRQPATCNDCHKKTITAAYHKICAPCARERRVCPWC 98
BLAST of mRNA_P-wetherbeei_contig10540.1.1 vs. uniprot
Match: A0A6V3DVU9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3DVU9_HETAK) HSP 1 Score: 141 bits (355), Expect = 2.170e-40 Identity = 68/103 (66.02%), Postives = 79/103 (76.70%), Query Frame = 1 Query: 1 MSTRKGGETSRK--PKHQNEFAFRHNPKSKKTLKILAMPNEGLCRRCHAKVEWRKKYRKYKPLKNPASCNECRQKTVRAAYHTKCGPCAKAKRVCPGCGERPE 303 MS+R+G ++K PKHQNEFAF+HNP SKKT KILAMPN GLCRRC K+EWRKKYRKYKPL PA C C+QKTV +AYH+ C PCAK +R+C C E E Sbjct: 1 MSSRRGKSAAKKGAPKHQNEFAFKHNPNSKKTRKILAMPNVGLCRRCSEKIEWRKKYRKYKPLTQPAVCRFCKQKTVTSAYHSACKPCAKQRRICAFCCESNE 103
BLAST of mRNA_P-wetherbeei_contig10540.1.1 vs. uniprot
Match: A0A6H5JI96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI96_9PHAE) HSP 1 Score: 140 bits (353), Expect = 1.210e-39 Identity = 67/98 (68.37%), Postives = 79/98 (80.61%), Query Frame = 1 Query: 1 MSTRKG-GET-SRKPKHQNEFAFRHNPKSKKTLKILAMPNEGLCRRCHAKVEWRKKYRKYKPLKNPASCNECRQKTVRAAYHTKCGPCAKAKRVCPGC 288 MSTRKG G T +RKPKHQN FAFRHNPKS+KT KIL+ N GLC CH KVEWRK+YRKY+PL+ PA+CN+C +KT+ AAYH C PCA+ +RVCP C Sbjct: 1 MSTRKGAGATRTRKPKHQNTFAFRHNPKSQKTAKILSSVNAGLCASCHDKVEWRKRYRKYRPLRQPATCNDCHKKTITAAYHKICTPCARERRVCPWC 98
BLAST of mRNA_P-wetherbeei_contig10540.1.1 vs. uniprot
Match: A0A7S2BQ45_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQ45_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.160e-37 Identity = 62/96 (64.58%), Postives = 69/96 (71.88%), Query Frame = 1 Query: 1 MSTRKGGETSRKPKHQNEFAFRHNPKSKKTLKILAMPNEGLCRRCHAKVEWRKKYRKYKPLKNPASCNECRQKTVRAAYHTKCGPCAKAKRVCPGC 288 MS ++ + RKP HQNEFAF HN S+ T KILAMPNEGLCRRCH K+EWRKKYRKYKPLK P CN C K V+AAYH C PCA K +C C Sbjct: 1 MSMKQSKKKGRKPAHQNEFAFVHNANSRLTKKILAMPNEGLCRRCHDKIEWRKKYRKYKPLKQPRKCNFCHNKAVKAAYHVACKPCAAEKSICAWC 96
BLAST of mRNA_P-wetherbeei_contig10540.1.1 vs. uniprot
Match: W7TBG8_9STRA (Uncharacterized protein n=6 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBG8_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.380e-37 Identity = 63/92 (68.48%), Postives = 69/92 (75.00%), Query Frame = 1 Query: 19 GETSRKPKHQNEFAFRHNPKSKKTLKILAMPNEGLCRRCHAKVEWRKKYRKYKPLKNPASCNECRQKTVRAAYHTKCGPCAKAKRVCPGCGE 294 G+ R P HQN FAFRHNPKSKKT +ILA P EGLC RCH KVEWRKKYRKYKPL PA+C C K+VRAAYH C PCA+ + VC GC E Sbjct: 17 GQRRRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAE 108
BLAST of mRNA_P-wetherbeei_contig10540.1.1 vs. uniprot
Match: A0A6A3LRT3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LRT3_9STRA) HSP 1 Score: 132 bits (333), Expect = 3.220e-37 Identity = 59/96 (61.46%), Postives = 71/96 (73.96%), Query Frame = 1 Query: 1 MSTRKGGETSRKPKHQNEFAFRHNPKSKKTLKILAMPNEGLCRRCHAKVEWRKKYRKYKPLKNPASCNECRQKTVRAAYHTKCGPCAKAKRVCPGC 288 MST++G R PKHQN FAF+HNPKSKKT +IL+MP GLC +C ++EWRKKYRKYKPL P SC C QKTV +AYH+ C PCAK + +C C Sbjct: 1 MSTQRGNMKKRAPKHQNNFAFKHNPKSKKTERILSMPIHGLCEKCRNQIEWRKKYRKYKPLTQPGSCIHCHQKTVTSAYHSSCDPCAKERNICAKC 96
BLAST of mRNA_P-wetherbeei_contig10540.1.1 vs. uniprot
Match: A0A1W0A5U4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5U4_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.090e-36 Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 1 Query: 1 MSTRKGGETSRKPKHQNEFAFRHNPKSKKTLKILAMPNEGLCRRCHAKVEWRKKYRKYKPLKNPASCNECRQKTVRAAYHTKCGPCAKAKRVCPGC 288 MS+++G PKHQN FAF+HNPKSKKT IL++P GLC CH ++ WRKKYRKY+PL P +C ECRQKTV AAYHT C PCAKAK VC C Sbjct: 1 MSSQRGNLKKGAPKHQNTFAFKHNPKSKKTEHILSLPIHGLCPHCHEQIVWRKKYRKYRPLTQPGNCTECRQKTVTAAYHTLCQPCAKAKGVCAKC 96
BLAST of mRNA_P-wetherbeei_contig10540.1.1 vs. uniprot
Match: A0A067D9F3_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D9F3_SAPPC) HSP 1 Score: 131 bits (330), Expect = 1.150e-36 Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 1 Query: 1 MSTRKGGETSRKPKHQNEFAFRHNPKSKKTLKILAMPNEGLCRRCHAKVEWRKKYRKYKPLKNPASCNECRQKTVRAAYHTKCGPCAKAKRVCPGC 288 MS+++G PKHQN FAF+HNPKSKKT IL +P GLC CH ++ WRKKYRKY+PL P +C ECRQKTV AAYHT C PCAKAK VC C Sbjct: 1 MSSQRGNVKKGAPKHQNTFAFKHNPKSKKTEHILGLPIHGLCPHCHEQIVWRKKYRKYRPLTQPGNCTECRQKTVTAAYHTLCQPCAKAKGVCAKC 96
BLAST of mRNA_P-wetherbeei_contig10540.1.1 vs. uniprot
Match: G4ZER0_PHYSP (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=G4ZER0_PHYSP) HSP 1 Score: 130 bits (326), Expect = 3.810e-36 Identity = 58/96 (60.42%), Postives = 70/96 (72.92%), Query Frame = 1 Query: 1 MSTRKGGETSRKPKHQNEFAFRHNPKSKKTLKILAMPNEGLCRRCHAKVEWRKKYRKYKPLKNPASCNECRQKTVRAAYHTKCGPCAKAKRVCPGC 288 MST++G R PKHQN FAF+HNPKSKKT +I++MP GLC +C ++EWRKKYRKYKPL P SC C QKTV +AYH C PCAK + +C C Sbjct: 1 MSTQRGNVKKRAPKHQNAFAFKHNPKSKKTERIMSMPIHGLCEKCRKQIEWRKKYRKYKPLTQPGSCIYCHQKTVTSAYHASCDPCAKERDICAKC 96
BLAST of mRNA_P-wetherbeei_contig10540.1.1 vs. uniprot
Match: A0A3R7MRP7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7MRP7_9STRA) HSP 1 Score: 128 bits (322), Expect = 3.030e-35 Identity = 59/96 (61.46%), Postives = 71/96 (73.96%), Query Frame = 1 Query: 1 MSTRKGGETSRKPKHQNEFAFRHNPKSKKTLKILAMPNEGLCRRCHAKVEWRKKYRKYKPLKNPASCNECRQKTVRAAYHTKCGPCAKAKRVCPGC 288 MS+++G R PKHQN FAF+HNPKSKKT +IL+MP GLC +C ++EWRKKYRKYKPL P SC C QKTV +AYH+ C PCAK + VC C Sbjct: 24 MSSQRGNVKKRAPKHQNTFAFKHNPKSKKTERILSMPIHGLCDKCLKQIEWRKKYRKYKPLSQPGSCIYCHQKTVTSAYHSACNPCAKERDVCAKC 119 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10540.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10540.1.1 >prot_P-wetherbeei_contig10540.1.1 ID=prot_P-wetherbeei_contig10540.1.1|Name=mRNA_P-wetherbeei_contig10540.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=113bp MSTRKGGETSRKPKHQNEFAFRHNPKSKKTLKILAMPNEGLCRRCHAKVEback to top mRNA from alignment at P-wetherbeei_contig10540:639..977- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10540.1.1 ID=mRNA_P-wetherbeei_contig10540.1.1|Name=mRNA_P-wetherbeei_contig10540.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig10540:639..977- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10540:639..977- >mRNA_P-wetherbeei_contig10540.1.1 ID=mRNA_P-wetherbeei_contig10540.1.1|Name=mRNA_P-wetherbeei_contig10540.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig10540:639..977- (Phaeothamnion wetherbeei SAG_119_79)back to top |